AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0143290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143290 MtrunA17_Chr7g0266031 97.146 876 25 0 1 876 1 876 0.0 1752
Msa0143290 MtrunA17_Chr1g0179101 71.348 883 222 13 1 876 1 859 0.0 1164
Msa0143290 MtrunA17_Chr3g0080101 51.129 886 339 19 1 876 1 802 0.0 739
Msa0143290 MtrunA17_Chr2g0290691 63.252 449 158 6 407 848 118 566 0.0 580
Msa0143290 MtrunA17_Chr7g0250631 58.798 466 177 8 383 843 259 714 0.0 558
Msa0143290 MtrunA17_Chr8g0335351 58.836 464 179 7 383 842 265 720 0.0 555
Msa0143290 MtrunA17_Chr7g0227331 68.668 383 114 3 467 843 207 589 0.0 554
Msa0143290 MtrunA17_Chr6g0449401 55.622 498 171 7 388 843 161 650 0.0 542
Msa0143290 MtrunA17_Chr2g0309421 58.654 416 164 6 437 848 120 531 6.15e-165 492
Msa0143290 MtrunA17_Chr8g0356291 51.267 513 206 14 347 848 4 483 1.68e-157 471
Msa0143290 MtrunA17_Chr4g0063311 54.177 395 162 7 466 843 65 457 1.15e-139 424
Msa0143290 MtrunA17_Chr2g0321101 53.543 381 150 6 471 836 66 434 6.83e-126 387
Msa0143290 MtrunA17_Chr8g0381091 48.872 399 169 9 460 843 45 423 5.39e-121 374
Msa0143290 MtrunA17_Chr2g0285711 49.231 390 164 9 467 843 57 425 2.74e-120 372
Msa0143290 MtrunA17_Chr2g0312641 46.366 399 177 9 451 842 51 419 2.99e-106 336
Msa0143290 MtrunA17_Chr4g0030361 46.011 376 155 4 467 842 282 609 1.48e-105 340
Msa0143290 MtrunA17_Chr8g0369091 44.415 376 164 3 467 842 572 902 3.03e-104 344
Msa0143290 MtrunA17_Chr2g0327561 45.646 379 163 3 467 842 601 939 3.48e-100 334
Msa0143290 MtrunA17_Chr4g0032761 39.572 374 201 7 489 847 10 373 2.58e-76 254
Msa0143290 MtrunA17_Chr8g0338741 37.280 397 207 10 489 869 15 385 3.30e-72 244
Msa0143290 MtrunA17_Chr2g0329011 38.133 375 191 8 489 859 12 349 2.52e-71 240
Msa0143290 MtrunA17_Chr7g0234641 37.534 373 201 8 484 844 1 353 5.00e-68 232
Msa0143290 MtrunA17_Chr5g0428981 37.427 342 168 8 491 831 760 1056 1.96e-57 214
Msa0143290 MtrunA17_Chr4g0018201 37.135 342 169 8 491 831 756 1052 5.07e-57 213
Msa0143290 MtrunA17_Chr6g0478601 38.053 339 165 8 494 831 111 405 7.07e-57 204
Msa0143290 MtrunA17_Chr3g0135951 30.238 420 249 12 418 831 25 406 1.92e-48 180
Msa0143290 MtrunA17_Chr1g0187581 31.620 389 216 12 481 856 104 455 3.09e-47 177
Msa0143290 MtrunA17_Chr1g0153321 30.458 371 214 9 470 834 84 416 8.13e-47 175
Msa0143290 MtrunA17_Chr7g0261491 31.217 378 211 12 481 847 107 446 4.37e-44 168
Msa0143290 MtrunA17_Chr1g0167351 31.266 387 205 12 489 856 105 449 4.87e-44 167
Msa0143290 MtrunA17_Chr2g0299781 29.670 364 223 10 472 831 91 425 2.25e-42 162
Msa0143290 MtrunA17_Chr1g0167311 30.220 364 211 9 489 847 110 435 1.02e-41 160
Msa0143290 MtrunA17_Chr1g0197721 30.423 355 176 10 491 842 48 334 7.72e-38 148
Msa0143290 MtrunA17_Chr7g0245031 39.216 153 91 1 489 641 143 293 2.05e-26 114
Msa0143290 MtrunA17_Chr7g0245031 45.946 111 57 2 722 831 301 409 1.34e-22 102
Msa0143290 MtrunA17_Chr4g0059751 36.527 167 92 4 484 641 80 241 5.41e-25 108
Msa0143290 MtrunA17_Chr4g0059751 41.071 112 63 2 722 832 249 358 1.88e-23 104
Msa0143290 MtrunA17_Chr1g0183651 33.750 160 104 1 481 640 107 264 1.16e-23 106
Msa0143290 MtrunA17_Chr1g0183651 41.406 128 68 4 725 847 317 442 2.89e-19 92.4
Msa0143290 MtrunA17_Chr3g0125381 41.964 112 61 1 716 827 100 207 1.26e-23 100
Msa0143290 MtrunA17_Chr3g0125381 36.634 101 60 2 544 643 2 99 2.77e-11 64.3
Msa0143290 MtrunA17_Chr8g0351491 41.509 106 58 1 722 827 167 268 3.03e-19 89.0
Msa0143290 MtrunA17_Chr8g0351491 34.437 151 95 2 494 643 16 163 6.61e-16 79.0
Msa0143290 MtrunA17_Chr3g0132671 26.702 382 164 14 491 840 16 313 1.54e-18 90.1
Msa0143290 MtrunA17_Chr3g0140631 36.364 154 92 2 491 642 34 183 2.41e-18 86.7
Msa0143290 MtrunA17_Chr3g0140631 38.318 107 62 1 719 825 185 287 2.51e-16 80.9
Msa0143290 MtrunA17_Chr8g0353621 40.385 104 58 1 722 825 161 260 2.35e-17 83.2
Msa0143290 MtrunA17_Chr8g0353621 34.211 152 94 2 494 643 10 157 6.75e-16 79.0
Msa0143290 MtrunA17_Chr4g0013131 33.548 155 100 2 487 641 5 156 3.52e-17 85.5
Msa0143290 MtrunA17_Chr3g0114511 34.839 155 96 1 487 641 25 174 3.91e-17 85.1
Msa0143290 MtrunA17_Chr6g0486661 37.209 129 73 4 719 842 909 1034 5.11e-17 86.3
Msa0143290 MtrunA17_Chr8g0379091 25.066 379 202 11 489 866 21 318 5.92e-17 85.1
Msa0143290 MtrunA17_Chr2g0284031 36.601 153 94 2 489 641 26 175 9.08e-17 84.3
Msa0143290 MtrunA17_Chr4g0008561 27.246 334 158 14 498 826 23 276 1.34e-16 84.7
Msa0143290 MtrunA17_Chr7g0244521 31.613 155 103 2 487 641 5 156 5.65e-16 81.6
Msa0143290 MtrunA17_Chr3g0107011 31.250 160 106 3 482 641 3 158 1.72e-15 80.1
Msa0143290 MtrunA17_Chr1g0205421 33.121 157 100 2 485 640 3 155 2.68e-15 79.3
Msa0143290 MtrunA17_Chr7g0272841 32.886 149 89 3 500 641 74 218 8.41e-15 78.6
Msa0143290 MtrunA17_Chr1g0188031 33.333 153 98 4 491 641 17 167 9.71e-15 77.8
Msa0143290 MtrunA17_Chr5g0432471 29.139 151 104 2 491 641 9 156 1.23e-14 77.4
Msa0143290 MtrunA17_Chr2g0304111 31.333 150 97 2 494 641 23 168 1.93e-14 77.0
Msa0143290 MtrunA17_Chr3g0107051 33.108 148 96 2 494 641 21 165 2.08e-14 76.6
Msa0143290 MtrunA17_Chr2g0286501 35.897 156 86 5 491 643 46 190 3.35e-14 77.4
Msa0143290 MtrunA17_Chr4g0000431 30.519 154 103 3 489 641 19 169 4.43e-14 76.6
Msa0143290 MtrunA17_Chr8g0346071 28.571 161 113 1 494 654 17 175 5.32e-14 75.5
Msa0143290 MtrunA17_Chr4g0074111 31.847 157 101 3 494 650 18 168 5.51e-14 74.7
Msa0143290 MtrunA17_Chr3g0091311 31.613 155 103 1 487 641 5 156 9.40e-14 72.4
Msa0143290 MtrunA17_Chr2g0284011 30.128 156 104 2 487 641 5 156 1.05e-13 74.3
Msa0143290 MtrunA17_Chr2g0302431 30.818 159 108 2 483 641 9 165 1.88e-13 73.9
Msa0143290 MtrunA17_Chr6g0450571 31.169 154 102 3 489 641 11 161 2.97e-13 73.6
Msa0143290 MtrunA17_Chr8g0346081 28.571 161 113 2 494 654 17 175 3.13e-13 72.8
Msa0143290 MtrunA17_Chr2g0317001 30.405 148 99 2 494 641 15 158 3.18e-13 73.6
Msa0143290 MtrunA17_Chr1g0150321 33.333 156 99 2 486 641 7 157 3.19e-13 72.8
Msa0143290 MtrunA17_Chr1g0202831 33.333 147 92 4 498 641 415 558 3.34e-13 73.9
Msa0143290 MtrunA17_Chr4g0001331 31.081 148 99 1 494 641 20 164 3.43e-13 72.8
Msa0143290 MtrunA17_Chr1g0176751 34.746 118 64 4 724 839 283 389 3.49e-13 73.2
Msa0143290 MtrunA17_Chr5g0419441 32.432 148 97 2 494 641 239 383 3.88e-13 73.6
Msa0143290 MtrunA17_Chr2g0330211 30.872 149 100 2 494 641 18 164 6.84e-13 72.0
Msa0143290 MtrunA17_Chr6g0453681 31.373 153 99 2 491 641 16 164 7.94e-13 72.0
Msa0143290 MtrunA17_Chr8g0386981 34.247 146 88 3 500 641 414 555 9.87e-13 72.4
Msa0143290 MtrunA17_Chr6g0468751 31.373 153 99 2 491 641 16 164 1.18e-12 71.2
Msa0143290 MtrunA17_Chr5g0428031 28.000 150 102 2 494 641 9 154 1.76e-12 70.5
Msa0143290 MtrunA17_Chr1g0190831 28.571 154 104 3 491 641 1 151 1.78e-12 71.2
Msa0143290 MtrunA17_Chr4g0025671 29.221 154 103 3 491 641 5 155 1.94e-12 71.6
Msa0143290 MtrunA17_Chr2g0321841 29.221 154 103 3 491 641 1 151 2.00e-12 71.2
Msa0143290 MtrunA17_Chr1g0170551 33.962 106 64 2 725 830 162 261 2.32e-12 71.2
Msa0143290 MtrunA17_Chr4g0061141 31.844 179 97 6 476 641 85 251 2.47e-12 70.9
Msa0143290 MtrunA17_Chr5g0441011 28.667 150 101 2 494 641 13 158 3.16e-12 69.7
Msa0143290 MtrunA17_Chr7g0267751 36.190 105 60 3 725 827 295 394 4.35e-12 69.7
Msa0143290 MtrunA17_Chr1g0166101 30.263 152 103 2 491 641 21 170 4.87e-12 68.9
Msa0143290 MtrunA17_Chr5g0432491 32.432 148 98 2 494 641 23 168 9.86e-12 68.2
Msa0143290 MtrunA17_Chr1g0188991 29.054 148 103 1 494 641 15 160 1.01e-11 68.9
Msa0143290 MtrunA17_Chr7g0257751 37.963 108 58 5 722 826 215 316 1.28e-11 68.2
Msa0143290 MtrunA17_Chr1g0203881 33.553 152 95 4 494 641 41 190 1.47e-11 67.8
Msa0143290 MtrunA17_Chr1g0200601 35.065 154 94 4 493 642 29 180 1.61e-11 67.8
Msa0143290 MtrunA17_Chr3g0130151 31.410 156 103 2 498 651 248 401 2.23e-11 67.8
Msa0143290 MtrunA17_Chr6g0453711 28.649 185 107 6 476 648 90 261 2.44e-11 67.4
Msa0143290 MtrunA17_Chr1g0205931 34.000 150 86 5 500 641 61 205 2.62e-11 67.4
Msa0143290 MtrunA17_Chr2g0276831 33.533 167 96 6 498 657 14 172 2.69e-11 66.2
Msa0143290 MtrunA17_Chr1g0190131 34.653 101 60 2 727 825 167 263 4.46e-11 64.7
Msa0143290 MtrunA17_Chr2g0333821 33.108 148 96 2 494 641 14 158 4.60e-11 66.2
Msa0143290 MtrunA17_Chr3g0132591 35.374 147 81 4 500 643 118 253 6.19e-11 65.9
Msa0143290 MtrunA17_Chr3g0133541 30.464 151 102 2 493 641 306 455 6.31e-11 66.2
Msa0143290 MtrunA17_Chr3g0091281 31.210 157 101 4 487 641 5 156 7.09e-11 63.5
Msa0143290 MtrunA17_Chr4g0063881 28.667 150 101 2 494 641 11 156 8.24e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143290 AT3G52890.2 51.975 962 348 30 1 876 1 934 0.0 836
Msa0143290 AT3G52890.4 51.975 962 348 30 1 876 1 934 0.0 836
Msa0143290 AT3G52890.1 51.975 962 348 30 1 876 1 934 0.0 836
Msa0143290 AT3G52890.3 51.975 962 348 30 1 876 1 934 0.0 836
Msa0143290 AT5G03640.2 47.472 969 373 27 1 876 1 926 0.0 737
Msa0143290 AT5G03640.1 47.472 969 373 27 1 876 1 926 0.0 737
Msa0143290 AT2G36350.1 64.903 567 158 9 350 876 384 949 0.0 725
Msa0143290 AT2G36350.1 44.388 196 84 7 1 178 1 189 1.31e-29 127
Msa0143290 AT5G47750.1 59.381 485 181 7 407 876 103 586 0.0 582
Msa0143290 AT4G26610.1 55.577 511 206 5 371 876 12 506 0.0 560
Msa0143290 AT5G55910.2 59.307 462 169 9 427 876 44 498 0.0 538
Msa0143290 AT5G55910.1 59.307 462 169 9 427 876 44 498 0.0 538
Msa0143290 AT2G44830.2 54.600 500 188 11 407 876 275 765 1.34e-178 535
Msa0143290 AT2G44830.3 54.600 500 188 11 407 876 275 765 1.34e-178 535
Msa0143290 AT2G44830.1 54.600 500 188 11 407 876 275 765 1.34e-178 535
Msa0143290 AT5G40030.1 58.636 440 152 7 454 876 73 499 4.75e-176 518
Msa0143290 AT3G27580.2 64.450 391 117 7 467 844 153 534 9.82e-170 505
Msa0143290 AT3G27580.1 64.450 391 117 7 467 844 153 534 9.82e-170 505
Msa0143290 AT1G79250.1 61.519 395 142 3 460 848 112 502 1.56e-165 493
Msa0143290 AT1G79250.3 61.519 395 142 3 460 848 112 502 1.56e-165 493
Msa0143290 AT1G79250.2 61.519 395 142 3 460 848 112 502 1.56e-165 493
Msa0143290 AT1G79250.4 61.519 395 142 3 460 848 112 502 1.56e-165 493
Msa0143290 AT3G12690.1 61.692 402 144 5 458 858 148 540 1.38e-164 491
Msa0143290 AT3G12690.3 61.692 402 144 5 458 858 148 540 1.38e-164 491
Msa0143290 AT3G12690.2 61.692 402 144 5 458 858 148 540 1.38e-164 491
Msa0143290 AT1G16440.1 59.635 384 142 3 467 848 86 458 2.18e-155 465
Msa0143290 AT3G44610.1 54.722 360 131 7 499 836 74 423 1.10e-126 389
Msa0143290 AT2G26700.1 46.018 452 187 8 447 844 35 483 4.23e-126 390
Msa0143290 AT2G34650.1 52.713 387 148 8 467 843 50 411 4.95e-126 387
Msa0143290 AT5G58140.6 46.277 376 155 4 468 842 551 880 1.65e-106 350
Msa0143290 AT5G58140.7 46.277 376 155 4 468 842 551 880 1.65e-106 350
Msa0143290 AT5G58140.5 46.277 376 155 4 468 842 551 880 1.65e-106 350
Msa0143290 AT5G58140.2 46.277 376 155 4 468 842 551 880 1.65e-106 350
Msa0143290 AT5G58140.1 46.277 376 155 4 468 842 551 880 1.65e-106 350
Msa0143290 AT5G58140.3 46.341 369 151 4 468 835 551 873 3.13e-105 346
Msa0143290 AT3G14370.1 45.358 377 176 5 469 841 61 411 5.64e-104 331
Msa0143290 AT3G45780.2 43.351 376 170 3 467 842 636 968 2.42e-95 322
Msa0143290 AT3G45780.1 43.351 376 170 3 467 842 636 968 2.42e-95 322
Msa0143290 AT1G53700.1 44.882 381 173 7 469 842 66 416 8.79e-95 306
Msa0143290 AT1G51170.1 39.402 368 184 9 489 843 17 358 1.09e-71 242
Msa0143290 AT3G20830.1 39.946 368 186 10 488 843 15 359 3.62e-71 241
Msa0143290 AT4G13000.1 36.813 364 183 9 489 843 15 340 1.45e-63 219
Msa0143290 AT3G25250.1 36.412 379 198 8 483 849 6 353 2.58e-63 219
Msa0143290 AT5G62310.1 37.026 343 169 10 491 831 751 1048 8.48e-56 209
Msa0143290 AT1G48490.3 37.681 345 162 10 489 831 823 1116 1.80e-55 209
Msa0143290 AT1G48490.2 37.681 345 162 10 489 831 823 1116 1.80e-55 209
Msa0143290 AT1G48490.1 37.681 345 162 10 489 831 823 1116 1.80e-55 209
Msa0143290 AT1G48490.4 37.681 345 162 10 489 831 824 1117 1.91e-55 209
Msa0143290 AT3G17850.1 37.901 343 160 10 494 831 882 1176 9.55e-55 207
Msa0143290 AT1G45160.2 36.667 360 175 10 489 844 665 975 1.24e-51 196
Msa0143290 AT1G45160.1 37.396 361 171 12 489 844 665 975 2.31e-51 196
Msa0143290 AT1G30640.2 30.633 395 235 8 456 844 80 441 1.06e-49 185
Msa0143290 AT1G30640.1 30.633 395 235 8 456 844 80 441 1.06e-49 185
Msa0143290 AT1G30640.3 31.622 370 216 7 479 844 12 348 2.23e-49 182
Msa0143290 AT2G20470.3 30.914 372 212 8 481 847 111 442 4.33e-46 174
Msa0143290 AT4G14350.2 29.596 446 256 12 413 847 44 442 9.52e-46 173
Msa0143290 AT4G14350.1 29.596 446 256 12 413 847 44 442 9.52e-46 173
Msa0143290 AT4G14350.4 29.596 446 256 12 413 847 44 442 9.52e-46 173
Msa0143290 AT2G20470.2 30.914 372 212 8 481 847 111 442 9.79e-46 174
Msa0143290 AT2G20470.1 30.914 372 212 8 481 847 111 442 9.79e-46 174
Msa0143290 AT4G14350.3 29.596 446 256 12 413 847 44 442 1.09e-45 173
Msa0143290 AT3G23310.1 30.052 386 228 10 469 847 95 445 2.54e-45 172
Msa0143290 AT4G33080.1 29.219 397 242 11 460 847 60 426 3.57e-45 171
Msa0143290 AT5G09890.2 31.268 355 206 7 481 831 89 409 3.59e-45 171
Msa0143290 AT5G09890.1 31.268 355 206 7 481 831 89 409 3.95e-45 171
Msa0143290 AT4G33080.2 29.219 397 242 11 460 847 60 426 4.74e-45 170
Msa0143290 AT1G03920.1 30.352 369 219 8 481 847 124 456 2.04e-44 170
Msa0143290 AT1G03920.3 30.352 369 219 8 481 847 124 456 2.04e-44 170
Msa0143290 AT1G03920.2 30.352 369 219 8 481 847 11 343 6.57e-44 166
Msa0143290 AT5G04510.2 30.114 352 175 10 494 842 44 327 5.10e-41 156
Msa0143290 AT5G04510.1 30.114 352 175 10 494 842 44 327 5.82e-41 158
Msa0143290 AT2G19400.1 29.700 367 225 10 470 831 81 419 7.63e-39 152
Msa0143290 AT5G58140.4 44.275 131 73 0 468 598 551 681 3.14e-30 128
Msa0143290 AT3G08720.1 40.000 155 91 1 487 641 133 285 3.23e-28 119
Msa0143290 AT3G08720.1 48.673 113 54 3 720 831 291 400 9.96e-26 112
Msa0143290 AT3G08720.3 40.000 155 91 1 487 641 133 285 3.23e-28 119
Msa0143290 AT3G08720.3 48.673 113 54 3 720 831 291 400 9.96e-26 112
Msa0143290 AT3G08720.4 40.000 155 91 1 487 641 133 285 3.23e-28 119
Msa0143290 AT3G08720.4 48.673 113 54 3 720 831 291 400 9.96e-26 112
Msa0143290 AT3G08720.2 40.000 155 91 1 487 641 133 285 3.23e-28 119
Msa0143290 AT3G08720.2 48.673 113 54 3 720 831 291 400 9.96e-26 112
Msa0143290 AT3G08730.1 39.355 155 92 1 487 641 127 279 1.58e-27 117
Msa0143290 AT3G08730.1 46.875 128 62 4 720 844 285 409 9.82e-27 115
Msa0143290 AT3G08730.2 39.355 155 92 1 487 641 127 279 1.58e-27 117
Msa0143290 AT3G08730.2 46.875 128 62 4 720 844 285 409 9.82e-27 115
Msa0143290 AT5G04510.3 38.776 147 84 2 494 638 44 186 8.48e-26 109
Msa0143290 AT3G10540.1 38.095 147 85 2 494 638 45 187 1.57e-24 108
Msa0143290 AT3G10540.1 34.058 138 85 3 706 842 196 328 7.29e-18 88.2
Msa0143290 AT2G25090.1 27.463 335 170 11 494 826 15 278 4.02e-22 101
Msa0143290 AT2G20050.1 43.966 116 59 3 722 834 934 1046 3.64e-20 97.1
Msa0143290 AT2G20050.2 43.966 116 59 3 722 834 931 1043 3.79e-20 97.1
Msa0143290 AT2G45490.1 42.308 104 56 1 722 825 173 272 2.86e-19 89.7
Msa0143290 AT2G45490.1 33.766 154 98 2 491 643 19 169 3.13e-16 80.9
Msa0143290 AT5G45820.1 33.758 157 101 2 485 641 3 156 5.92e-18 88.2
Msa0143290 AT2G34180.1 25.568 352 182 9 477 827 40 312 1.34e-17 87.4
Msa0143290 AT2G25880.2 40.187 107 60 1 719 825 141 243 1.39e-17 84.0
Msa0143290 AT2G25880.1 40.187 107 60 1 719 825 173 275 1.92e-17 84.3
Msa0143290 AT2G25880.1 35.762 151 91 2 494 642 25 171 6.18e-16 79.7
Msa0143290 AT5G18700.1 34.437 151 91 2 491 641 1 143 1.95e-17 88.2
Msa0143290 AT2G25880.4 40.187 107 60 1 719 825 186 288 2.24e-17 84.3
Msa0143290 AT2G25880.4 35.762 151 91 2 494 642 38 184 1.03e-15 79.3
Msa0143290 AT2G25880.3 40.187 107 60 1 719 825 234 336 5.07e-17 84.0
Msa0143290 AT2G25880.3 35.762 151 91 2 494 642 86 232 3.13e-15 78.6
Msa0143290 AT5G45810.1 33.951 162 104 2 480 641 14 172 8.04e-17 84.7
Msa0143290 AT4G18700.1 35.948 153 95 2 489 641 21 170 1.20e-16 84.3
Msa0143290 AT4G32830.1 38.318 107 62 1 719 825 179 281 1.92e-16 81.3
Msa0143290 AT4G32830.1 35.762 151 91 2 494 642 31 177 1.71e-15 78.6
Msa0143290 AT2G45490.2 33.766 154 98 2 491 643 19 169 3.53e-16 79.7
Msa0143290 AT2G45490.2 40.244 82 49 0 722 803 173 254 2.41e-13 71.6
Msa0143290 AT1G12680.1 34.416 154 91 4 498 650 111 255 3.90e-16 82.8
Msa0143290 AT5G25110.1 33.108 148 96 1 494 641 43 187 4.03e-16 82.8
Msa0143290 AT4G14580.1 33.333 156 101 3 487 641 14 167 1.29e-15 80.9
Msa0143290 AT1G29230.1 35.811 148 92 2 494 641 74 218 1.43e-15 81.3
Msa0143290 AT4G24400.1 30.675 163 107 2 494 654 9 167 4.12e-15 79.3
Msa0143290 AT4G24400.2 30.675 163 107 2 494 654 9 167 4.34e-15 79.0
Msa0143290 AT5G01810.1 34.416 154 97 3 488 641 7 156 6.69e-15 78.6
Msa0143290 AT5G01810.2 34.416 154 97 3 488 641 7 156 6.69e-15 78.6
Msa0143290 AT5G10930.1 35.762 151 89 6 494 641 12 157 6.84e-15 78.6
Msa0143290 AT5G10930.1 37.143 105 61 3 708 811 156 256 7.99e-11 65.9
Msa0143290 AT5G01810.3 34.416 154 97 3 488 641 7 156 1.05e-14 77.4
Msa0143290 AT1G09000.1 32.919 161 101 4 500 655 75 233 2.84e-14 77.4
Msa0143290 AT3G06030.1 36.486 148 85 5 500 641 74 218 3.96e-14 77.0
Msa0143290 AT1G54960.1 32.692 156 98 3 500 650 74 227 3.96e-14 77.0
Msa0143290 AT1G54960.2 32.692 156 98 3 500 650 74 227 3.96e-14 77.0
Msa0143290 AT1G09000.2 32.919 161 101 4 500 655 75 233 4.01e-14 77.0
Msa0143290 AT3G23000.1 33.117 154 96 3 491 641 22 171 9.98e-14 74.7
Msa0143290 AT3G01090.2 30.693 202 113 5 446 641 7 187 1.00e-13 75.5
Msa0143290 AT1G30270.1 33.333 150 94 4 494 641 31 176 1.55e-13 74.7
Msa0143290 AT3G29160.3 33.548 155 93 4 491 641 17 165 1.79e-13 73.6
Msa0143290 AT1G69220.1 31.788 151 94 3 494 641 249 393 2.44e-13 74.7
Msa0143290 AT1G30270.2 33.333 150 94 4 494 641 31 176 2.44e-13 73.9
Msa0143290 AT3G29160.1 33.548 155 93 4 491 641 17 165 2.94e-13 73.9
Msa0143290 AT3G29160.2 33.548 155 93 4 491 641 17 165 2.94e-13 73.9
Msa0143290 AT4G30960.1 35.065 154 95 3 490 641 18 168 3.25e-13 73.2
Msa0143290 AT1G50240.3 35.922 103 60 2 725 827 161 257 3.41e-13 74.3
Msa0143290 AT1G50240.2 35.922 103 60 2 725 827 161 257 3.41e-13 74.3
Msa0143290 AT1G70430.3 30.719 153 104 1 489 641 11 161 3.50e-13 73.9
Msa0143290 AT1G70430.1 30.719 153 104 1 489 641 11 161 4.02e-13 73.6
Msa0143290 AT1G70430.4 30.719 153 104 1 489 641 11 161 4.12e-13 73.6
Msa0143290 AT2G30360.1 33.557 149 96 3 494 641 21 167 4.16e-13 72.8
Msa0143290 AT5G58380.1 28.378 148 103 2 494 641 12 156 4.53e-13 73.2
Msa0143290 AT5G28290.1 30.519 154 101 3 491 641 1 151 5.41e-13 73.2
Msa0143290 AT5G28290.2 30.519 154 101 3 491 641 1 151 5.41e-13 73.2
Msa0143290 AT5G28290.3 30.519 154 101 3 491 641 1 151 5.77e-13 73.2
Msa0143290 AT3G01090.3 32.026 153 98 2 491 641 16 164 6.23e-13 72.8
Msa0143290 AT3G01090.1 32.026 153 98 2 491 641 16 164 6.23e-13 72.8
Msa0143290 AT3G04810.2 29.221 154 103 3 491 641 1 151 6.65e-13 72.8
Msa0143290 AT3G04810.1 29.221 154 103 3 491 641 1 151 6.65e-13 72.8
Msa0143290 AT3G04810.3 29.221 154 103 3 491 641 1 151 6.65e-13 72.8
Msa0143290 AT4G24100.1 29.333 150 104 1 492 641 31 178 6.72e-13 73.2
Msa0143290 AT3G17510.1 32.026 153 98 2 491 641 17 165 7.87e-13 72.0
Msa0143290 AT4G24100.2 29.333 150 104 1 492 641 31 178 8.17e-13 72.8
Msa0143290 AT1G01140.1 30.872 149 101 2 493 641 18 164 9.02e-13 72.0
Msa0143290 AT1G01140.3 30.872 149 101 2 493 641 18 164 9.33e-13 72.0
Msa0143290 AT4G14480.1 31.544 149 99 2 494 641 15 161 9.69e-13 72.0
Msa0143290 AT4G24100.4 29.333 150 104 1 492 641 47 194 9.71e-13 72.8
Msa0143290 AT1G01140.2 30.872 149 101 2 493 641 18 164 9.84e-13 72.0
Msa0143290 AT4G24100.3 29.333 150 104 1 492 641 47 194 1.12e-12 72.4
Msa0143290 AT5G14720.1 30.519 154 103 3 489 641 11 161 1.22e-12 72.4
Msa0143290 AT5G14720.2 30.519 154 103 3 489 641 11 161 1.22e-12 72.4
Msa0143290 AT4G09570.1 35.714 154 93 4 493 642 24 175 1.26e-12 71.6
Msa0143290 AT5G57630.2 27.673 159 107 3 487 641 2 156 1.56e-12 70.9
Msa0143290 AT5G57630.1 27.673 159 107 3 487 641 2 156 1.75e-12 70.9
Msa0143290 AT2G26980.3 31.250 144 97 2 498 641 18 159 1.81e-12 70.9
Msa0143290 AT5G21326.1 30.667 150 98 2 494 641 13 158 1.88e-12 70.9
Msa0143290 AT2G26980.4 31.250 144 97 2 498 641 28 169 1.95e-12 70.9
Msa0143290 AT2G26980.1 30.405 148 101 2 494 641 14 159 2.20e-12 70.5
Msa0143290 AT4G04720.2 34.286 105 62 3 726 828 241 340 2.42e-12 70.9
Msa0143290 AT4G04720.2 30.573 157 99 4 492 642 78 230 2.06e-11 67.8
Msa0143290 AT4G04720.1 34.286 105 62 3 726 828 241 340 2.42e-12 70.9
Msa0143290 AT4G04720.1 30.573 157 99 4 492 642 78 230 2.06e-11 67.8
Msa0143290 AT3G44200.2 29.747 158 97 4 491 641 5 155 3.41e-12 71.2
Msa0143290 AT3G44200.1 29.747 158 97 4 491 641 5 155 3.41e-12 71.2
Msa0143290 AT2G41860.1 33.117 154 95 4 494 642 54 204 4.40e-12 70.1
Msa0143290 AT2G26980.5 30.405 148 101 2 494 641 14 159 4.42e-12 69.7
Msa0143290 AT2G41860.2 33.117 154 95 4 494 642 54 204 4.72e-12 70.1
Msa0143290 AT5G35410.2 28.652 178 121 3 498 671 15 190 4.83e-12 69.3
Msa0143290 AT1G53570.7 33.333 156 100 3 498 651 218 371 5.18e-12 69.7
Msa0143290 AT1G53570.6 33.333 156 100 3 498 651 218 371 5.21e-12 69.7
Msa0143290 AT4G10730.2 28.667 150 105 1 492 641 25 172 5.32e-12 70.1
Msa0143290 AT1G35670.1 35.714 154 93 4 493 642 25 176 5.72e-12 69.7
Msa0143290 AT2G26980.2 31.250 144 97 2 498 641 18 159 6.00e-12 67.4
Msa0143290 AT1G08650.1 35.922 103 60 2 727 827 176 274 6.08e-12 67.8
Msa0143290 AT4G10730.1 28.667 150 105 1 492 641 45 192 6.89e-12 69.7
Msa0143290 AT1G79640.6 30.519 154 103 3 489 641 8 158 6.96e-12 69.7
Msa0143290 AT1G79640.1 30.519 154 103 3 489 641 8 158 7.50e-12 69.7
Msa0143290 AT1G79640.2 30.519 154 103 3 489 641 8 158 7.67e-12 69.7
Msa0143290 AT1G79640.4 30.519 154 103 3 489 641 8 158 7.67e-12 69.7
Msa0143290 AT1G79640.3 30.519 154 103 3 489 641 8 158 7.67e-12 69.7
Msa0143290 AT1G53570.1 33.333 156 100 3 498 651 218 371 8.00e-12 69.3
Msa0143290 AT1G79640.5 30.519 154 103 3 489 641 11 161 8.17e-12 69.7
Msa0143290 AT1G53570.4 33.333 156 100 3 498 651 218 371 8.20e-12 69.3
Msa0143290 AT1G53570.2 33.333 156 100 3 498 651 218 371 8.27e-12 69.3
Msa0143290 AT1G53570.3 33.333 156 100 3 498 651 218 371 8.27e-12 69.3
Msa0143290 AT1G53165.1 30.201 149 100 2 493 641 14 158 9.03e-12 69.3
Msa0143290 AT1G53165.3 30.201 149 100 2 493 641 14 158 9.83e-12 69.3
Msa0143290 AT1G53165.2 30.201 149 100 2 493 641 14 158 1.09e-11 69.3
Msa0143290 AT5G35410.1 28.652 178 121 3 498 671 15 190 1.10e-11 68.6
Msa0143290 AT5G39420.1 33.708 178 95 6 476 641 85 251 1.20e-11 68.9
Msa0143290 AT5G39440.1 32.026 153 98 2 491 641 16 164 1.42e-11 68.6
Msa0143290 AT1G08650.2 38.462 91 54 1 727 815 176 266 1.72e-11 66.2
Msa0143290 AT2G38490.1 35.294 153 86 5 494 641 28 172 1.97e-11 67.8
Msa0143290 AT1G73500.1 33.557 149 86 5 497 641 50 189 3.07e-11 65.9
Msa0143290 AT1G69220.2 31.690 142 88 3 503 641 231 366 3.91e-11 67.4
Msa0143290 AT3G20860.1 26.351 148 108 1 494 641 4 150 4.28e-11 66.6
Msa0143290 AT1G54510.4 27.848 158 100 4 491 641 1 151 4.73e-11 67.0
Msa0143290 AT1G54510.2 27.848 158 100 4 491 641 1 151 4.73e-11 67.0
Msa0143290 AT1G54510.1 27.848 158 100 4 491 641 1 151 4.73e-11 67.0
Msa0143290 AT1G54510.3 27.848 158 100 4 491 641 1 151 4.73e-11 67.0
Msa0143290 AT3G06630.6 27.511 229 149 9 420 641 277 495 6.50e-11 66.6
Msa0143290 AT1G32320.1 32.877 146 88 3 497 641 51 187 6.59e-11 65.1
Msa0143290 AT3G15220.1 29.530 149 101 2 493 641 14 158 6.67e-11 66.6
Msa0143290 AT4G21940.3 32.381 105 64 3 726 828 263 362 7.66e-11 65.9
Msa0143290 AT4G29810.1 29.670 182 117 5 489 664 65 241 7.95e-11 65.5
Msa0143290 AT5G01820.1 32.164 171 112 3 494 663 22 189 8.20e-11 65.9
Msa0143290 AT4G21940.2 32.075 106 65 3 725 828 262 362 8.25e-11 66.2
Msa0143290 AT3G04530.1 34.444 90 57 1 727 814 172 261 8.41e-11 64.3
Msa0143290 AT4G21940.1 32.381 105 64 3 726 828 263 362 8.67e-11 65.9
Msa0143290 AT4G29810.2 29.670 182 117 5 489 664 74 250 8.92e-11 65.1

Find 220 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGACCCTGCAAAAGTTTC+TGG 0.125540 1_4:+2183932 Msa0143290:CDS
CTTATAATGGGTTCATTATC+TGG 0.185806 1_4:+2181118 Msa0143290:exon
TCTTCATCTACTTCTGTTAA+TGG 0.190386 1_4:+2182021 Msa0143290:CDS
AAGTTGTTTGTTTGCTATTA+AGG 0.198997 1_4:+2182671 Msa0143290:CDS
CCTTCTTTGAGGGCCTTAAC+TGG 0.203909 1_4:+2184434 Msa0143290:CDS
TAAATCTTCGTCAAGGGATT+TGG 0.227541 1_4:+2181324 Msa0143290:CDS
TATGGAAGAACACCCTTTAA+AGG 0.228797 1_4:+2184244 Msa0143290:CDS
AATTTCCCAAGCAGAATTAA+TGG 0.232061 1_4:-2181737 None:intergenic
CCACTATTTGATGCCGAATA+AGG 0.242303 1_4:-2182336 None:intergenic
CGAGTCTTCAATGCTCGATT+AGG 0.253869 1_4:+2179977 Msa0143290:five_prime_UTR
GTATATCTTGCCGAACTAAT+TGG 0.258000 1_4:+2182645 Msa0143290:CDS
TTCGTTGTTAGAACCTTTAA+AGG 0.262732 1_4:-2184257 None:intergenic
TCAAATGCAGCACGGAGTTT+TGG 0.266992 1_4:+2182569 Msa0143290:CDS
GTAGATGAAGCCAGTCATTC+TGG 0.275052 1_4:+2181586 Msa0143290:CDS
TGGCTCCCTGCTCCATATAT+TGG 0.288247 1_4:+2184647 Msa0143290:three_prime_UTR
CTCCCAACCTCTGATATTCT+TGG 0.292781 1_4:-2181538 None:intergenic
AAAGTGGCTGTGTCAAATTC+TGG 0.304036 1_4:+2181970 Msa0143290:CDS
CTGAAGTTCACTCCGTTTCC+AGG 0.311594 1_4:-2182288 None:intergenic
ATCAGATAATCTTTCATGTT+TGG 0.320095 1_4:+2182809 Msa0143290:CDS
TCACAAAACTCTGGAAGTTC+TGG 0.320243 1_4:-2184481 None:intergenic
TAGTTCATATAAACCTTATT+CGG 0.320252 1_4:+2182323 Msa0143290:CDS
CTCAAGAATGGTTTGGACTT+TGG 0.326240 1_4:+2180934 Msa0143290:five_prime_UTR
AAAGTTACATCTCCAATATA+TGG 0.333047 1_4:-2184659 None:intergenic
TCCCTCTTCTTTGATGATCT+CGG 0.339230 1_4:-2184167 None:intergenic
TGACTTCGATAGCCGTTTCA+TGG 0.341012 1_4:-2181506 None:intergenic
TGCAGCAGCAGGTAGGAATC+TGG 0.342721 1_4:-2184026 None:intergenic
TGGGATAGCGCAACGAATTA+AGG 0.347741 1_4:-2184458 None:intergenic
CCTGCAAAAGTTTCTGGGCT+TGG 0.357846 1_4:+2183938 Msa0143290:CDS
AAGAGACCTTTGTATATCTA+AGG 0.360898 1_4:+2181468 Msa0143290:CDS
GCAACTAATCAACTTCATTC+CGG 0.361763 1_4:+2181766 Msa0143290:CDS
AAATCTTCGTCAAGGGATTT+GGG 0.363293 1_4:+2181325 Msa0143290:CDS
CTTGACTCGATGATGTGATT+TGG 0.370252 1_4:-2181714 None:intergenic
GAGTCTTCAATGCTCGATTA+GGG 0.383926 1_4:+2179978 Msa0143290:five_prime_UTR
CAACTAATCAACTTCATTCC+GGG 0.385324 1_4:+2181767 Msa0143290:CDS
TACCCCTCGCACAATTAAAA+TGG 0.385499 1_4:+2182071 Msa0143290:CDS
GAAGCCTTTGGCGCCGAACT+TGG 0.389707 1_4:+2181246 Msa0143290:CDS
TCTCTTTCAGTTTGAGCCCT+AGG 0.392053 1_4:-2182732 None:intergenic
GCTGCGGAAGTGATTTGATC+TGG 0.393762 1_4:-2184081 None:intergenic
TTGCTAACTTCATTTGATGT+AGG 0.395873 1_4:-2182159 None:intergenic
TGTTCCTGGCACAGCTCAGC+TGG 0.396521 1_4:+2182185 Msa0143290:CDS
CCCTCTTCTTTGATGATCTC+GGG 0.399717 1_4:-2184166 None:intergenic
TAAAGAACCTGAAAACCGTT+TGG 0.399794 1_4:+2184375 Msa0143290:CDS
AAAGAACCTGAAAACCGTTT+GGG 0.404163 1_4:+2184376 Msa0143290:CDS
GCAGTTGACTGGTGGACATT+TGG 0.407061 1_4:+2184199 Msa0143290:CDS
AAACTGACAAATGGGTCATC+AGG 0.408407 1_4:-2184319 None:intergenic
CTACTTCTGTTAATGGCAGC+AGG 0.408734 1_4:+2182028 Msa0143290:CDS
TTGACCCTGCAAAAGTTTCT+GGG 0.409809 1_4:+2183933 Msa0143290:CDS
CTCGAGTTGCTCTTTCAACT+TGG 0.411286 1_4:-2182406 None:intergenic
TTGACTCGATGATGTGATTT+GGG 0.412748 1_4:-2181713 None:intergenic
GAAGCAAGGGATCTGATTAG+AGG 0.414156 1_4:+2184343 Msa0143290:CDS
GCATCAAATAGTGGTAATAT+AGG 0.414196 1_4:+2182345 Msa0143290:CDS
GAAAGAGATGGAGAAGATGC+AGG 0.415026 1_4:-2181883 None:intergenic
CTTGTGAAATAGTTGAAGTA+AGG 0.416302 1_4:+2181143 Msa0143290:CDS
GAAGTTAGCAAGTCTGTTCC+TGG 0.420252 1_4:+2182171 Msa0143290:CDS
TTATCCTTGTATCCCAAGTT+CGG 0.420923 1_4:-2181259 None:intergenic
ACCGTTTGGGTTCACAGAAA+GGG 0.426464 1_4:+2184389 Msa0143290:CDS
GTAAGGGAGGACCGAAGTAT+AGG 0.428533 1_4:+2181160 Msa0143290:CDS
TGCTGAAGTCCTCCTTGCTC+TGG 0.431428 1_4:+2183763 Msa0143290:CDS
TTTGGATTCATTGTGGAAGT+TGG 0.431467 1_4:+2180952 Msa0143290:five_prime_UTR
GAAGATGATTTCAGAAGTGT+TGG 0.433733 1_4:-2183905 None:intergenic
TCCTTCACTTTCTTCTTACT+CGG 0.433818 1_4:-2182111 None:intergenic
AACCGTTTGGGTTCACAGAA+AGG 0.433843 1_4:+2184388 Msa0143290:CDS
AAACTGAAAGAGAAATCTTA+AGG 0.434080 1_4:+2182742 Msa0143290:CDS
CTTGCTTCGAAACTGACAAA+TGG 0.436089 1_4:-2184328 None:intergenic
AACGTGGTGTTGCAAAGTCT+TGG 0.438682 1_4:+2184292 Msa0143290:CDS
GGCGCCGAACTTGGGATACA+AGG 0.441090 1_4:+2181255 Msa0143290:CDS
CCCCTTTCTGTGAACCCAAA+CGG 0.443431 1_4:-2184390 None:intergenic
CTTCTTTGAGGGCCTTAACT+GGG 0.444338 1_4:+2184435 Msa0143290:CDS
CTGGAGTACTTGCACATGCT+TGG 0.444876 1_4:+2183782 Msa0143290:CDS
CTCACATGTCAAAGGATGTT+AGG 0.445016 1_4:+2182526 Msa0143290:CDS
TGTAGTAAAATTAGTGAGTT+GGG 0.447058 1_4:+2181030 Msa0143290:five_prime_UTR
GTCAAGCCATTAATTCTGCT+TGG 0.448741 1_4:+2181731 Msa0143290:CDS
AAACAACATCCCTTCTTTGA+GGG 0.448791 1_4:+2184424 Msa0143290:CDS
TAAACAACATCCCTTCTTTG+AGG 0.449894 1_4:+2184423 Msa0143290:CDS
ATATAACCTCAAGAATGGTT+TGG 0.450453 1_4:+2180927 Msa0143290:five_prime_UTR
ACAACTTGTGCCAATTAGTT+CGG 0.452164 1_4:-2182655 None:intergenic
AAACCAAGAGGTAATGGCCT+TGG 0.452675 1_4:+2182254 Msa0143290:CDS
AACTTGGTTGCGGAGACATT+GGG 0.453030 1_4:+2182619 Msa0143290:CDS
CTCACATTGCTGAGAGTAAA+GGG 0.453463 1_4:+2181611 Msa0143290:CDS
CTGAAGGAATATGTTGAAAC+GGG 0.454089 1_4:-2180014 None:intergenic
CCTTATTCGGCATCAAATAG+TGG 0.454819 1_4:+2182336 Msa0143290:CDS
GCCTCAGAATTTCCAACTTG+TGG 0.457023 1_4:-2181424 None:intergenic
TTTGTTTGCTATTAAGGTCA+TGG 0.458965 1_4:+2182677 Msa0143290:CDS
TCGTTGTTAGAACCTTTAAA+GGG 0.461755 1_4:-2184256 None:intergenic
CCAGTTAAGGCCCTCAAAGA+AGG 0.464694 1_4:-2184434 None:intergenic
GCCTTGGACTCTACTAGTCC+TGG 0.465831 1_4:+2182270 Msa0143290:CDS
GACATGGTGCTGCAGTTGAC+TGG 0.470051 1_4:+2184188 Msa0143290:CDS
TCAAGCCATTAATTCTGCTT+GGG 0.470973 1_4:+2181732 Msa0143290:CDS
CTCCAAGAATATCAGAGGTT+GGG 0.472794 1_4:+2181536 Msa0143290:CDS
TAAGGGAGGACCGAAGTATA+GGG 0.475161 1_4:+2181161 Msa0143290:CDS
AAACTTGGTTGCGGAGACAT+TGG 0.477930 1_4:+2182618 Msa0143290:CDS
AATGTGAGGCCCAGAATGAC+TGG 0.478847 1_4:-2181596 None:intergenic
AAGAGAAATCTTAAGGATGC+TGG 0.478853 1_4:+2182749 Msa0143290:CDS
AACATTCTTGTTCGAGAAGA+CGG 0.478857 1_4:+2183833 Msa0143290:CDS
ACATCTCCAATATATGGAGC+AGG 0.490284 1_4:-2184653 None:intergenic
GCATGTTCATCAAGTAGAGT+TGG 0.490616 1_4:+2181814 Msa0143290:CDS
GCAAGGTCAAACTCATTTGT+TGG 0.491148 1_4:+2184124 Msa0143290:CDS
ACTGAAGGAATATGTTGAAA+CGG 0.493146 1_4:-2180015 None:intergenic
TTAACCGATTCCCACATTTG+TGG 0.493987 1_4:+2184627 Msa0143290:three_prime_UTR
TTGCTTCGAAACTGACAAAT+GGG 0.494305 1_4:-2184327 None:intergenic
TAATCTTTCATGTTTGGTCA+TGG 0.496468 1_4:+2182815 Msa0143290:CDS
AACGAATTAAGGCCCAGTTA+AGG 0.498983 1_4:-2184447 None:intergenic
TGAGGCTGTTAATTTGAAGC+AGG 0.499020 1_4:+2181441 Msa0143290:CDS
AAGCCTTTGGCGCCGAACTT+GGG 0.499377 1_4:+2181247 Msa0143290:CDS
CCTCACATTGCTGAGAGTAA+AGG 0.499547 1_4:+2181610 Msa0143290:CDS
TAGATGAAGCCAGTCATTCT+GGG 0.502546 1_4:+2181587 Msa0143290:CDS
AAAGAGATGGAGAAGATGCA+GGG 0.503869 1_4:-2181882 None:intergenic
ACATACAATGTAGGAAGAAA+CGG 0.506468 1_4:-2182777 None:intergenic
AGTGAATATAACCTCAAGAA+TGG 0.510100 1_4:+2180922 Msa0143290:five_prime_UTR
CAAAACTCTGGAAGTTCTGG+TGG 0.511828 1_4:-2184478 None:intergenic
TTGGTCATGGAGTATTGTCC+AGG 0.511859 1_4:+2182828 Msa0143290:CDS
CTAATCGAGCATTGAAGACT+CGG 0.513238 1_4:-2179976 None:intergenic
AGTCCAAGGCCATTACCTCT+TGG 0.513277 1_4:-2182257 None:intergenic
CATTTGTCAGTTTCGAAGCA+AGG 0.515485 1_4:+2184329 Msa0143290:CDS
GAAGGGATGTTGTTTAATCT+CGG 0.518458 1_4:-2184416 None:intergenic
GTGGAAGAAAACGTTGAAGA+TGG 0.518888 1_4:-2180045 None:intergenic
GTTGCTCTCATCACTGGTAC+TGG 0.520179 1_4:-2182475 None:intergenic
GCAGCAGCAGGTAGGAATCT+GGG 0.520999 1_4:-2184025 None:intergenic
AAGATGATTTCAGAAGTGTT+GGG 0.524500 1_4:-2183904 None:intergenic
AGACATGGCATCACAAGGCA+AGG 0.531541 1_4:+2184516 Msa0143290:CDS
ATGTAGTAAAATTAGTGAGT+TGG 0.532508 1_4:+2181029 Msa0143290:five_prime_UTR
GGAGCCACAAATGTGGGAAT+CGG 0.535365 1_4:-2184631 None:intergenic
GTAAATTGCACATACAATGT+AGG 0.536796 1_4:-2182786 None:intergenic
ACTCCAAAATCACAAAACTC+TGG 0.536947 1_4:-2184490 None:intergenic
TCTCCAAGAATATCAGAGGT+TGG 0.537092 1_4:+2181535 Msa0143290:CDS
ATTTGTCAGTTTCGAAGCAA+GGG 0.537336 1_4:+2184330 Msa0143290:CDS
CATGTTCATCAAGTAGAGTT+GGG 0.537659 1_4:+2181815 Msa0143290:CDS
GTGGAGATCTTCATGTTCTA+CGG 0.539228 1_4:+2182850 Msa0143290:CDS
ACTCATGTTGCTCTCATCAC+TGG 0.540951 1_4:-2182481 None:intergenic
CAGAAGTGGCTTCCATGAAA+CGG 0.541059 1_4:+2181494 Msa0143290:CDS
TGAGTTTGACCTTGCATCAG+TGG 0.542160 1_4:-2184116 None:intergenic
CAAATCACTTCCGCAGCTTG+TGG 0.542273 1_4:+2184087 Msa0143290:CDS
AAGTATTTAGAATGTAATGT+AGG 0.542356 1_4:+2184544 Msa0143290:CDS
TATCCCAAGTTCGGCGCCAA+AGG 0.543142 1_4:-2181250 None:intergenic
AAGAGATGGAGAAGATGCAG+GGG 0.543229 1_4:-2181881 None:intergenic
GTGGGCTCAGCCACAAGCTG+CGG 0.549030 1_4:-2184097 None:intergenic
CCGTTTGGGTTCACAGAAAG+GGG 0.549500 1_4:+2184390 Msa0143290:CDS
CTGCGGAAGTGATTTGATCT+GGG 0.549511 1_4:-2184080 None:intergenic
TGCTCGTAAATCTTCGTCAA+GGG 0.550429 1_4:+2181318 Msa0143290:CDS
CAAACCAGCTGAGCTGTGCC+AGG 0.551137 1_4:-2182189 None:intergenic
CACGAAGGAAGAAGATGCCT+AGG 0.551195 1_4:+2182715 Msa0143290:CDS
CGCGGAACACCCATTGTCAT+CGG 0.556845 1_4:-2181397 None:intergenic
GATTTGGGCATTTCACAAGA+TGG 0.557675 1_4:+2181340 Msa0143290:CDS
GACTCTACTAGTCCTGGAAA+CGG 0.559918 1_4:+2182276 Msa0143290:CDS
AGGCAAAGCAGTTGCAAAGG+TGG 0.561015 1_4:+2182365 Msa0143290:CDS
GTTCTACGGCAGAAGCAGCT+TGG 0.568148 1_4:+2182864 Msa0143290:CDS
CACAAACACTTCTACTCTCA+AGG 0.569119 1_4:-2181053 None:intergenic
TAGCGCCTTTCCCTATACTT+CGG 0.571577 1_4:-2181171 None:intergenic
GCCCGAGATCATCAAAGAAG+AGG 0.573356 1_4:+2184165 Msa0143290:CDS
AATGAAGAAGCTTGTCTCGT+AGG 0.573728 1_4:-2179953 None:intergenic
CAAAGCTCAAAGAGTAGTCA+AGG 0.574719 1_4:+2182435 Msa0143290:CDS
GTGGCTCAAGTTGCGGCAGT+AGG 0.575395 1_4:+2182502 Msa0143290:CDS
GTTCCGCGGTCTCCACAAGT+TGG 0.575962 1_4:+2181412 Msa0143290:CDS
AACATGAGTGGCTCAAGTTG+CGG 0.579849 1_4:+2182495 Msa0143290:CDS
CATGTCAAAGGATGTTAGGT+GGG 0.580069 1_4:+2182530 Msa0143290:CDS
CAAATTCTGGACGGAAAGGT+AGG 0.580343 1_4:+2181983 Msa0143290:CDS
GAAGATGGTGTTTGAACTGA+AGG 0.581176 1_4:-2180030 None:intergenic
AACTGACAAATGGGTCATCA+GGG 0.581948 1_4:-2184318 None:intergenic
TGAGAGTAAAGGGCGAAGAA+TGG 0.582038 1_4:+2181621 Msa0143290:CDS
TTGTGAAATAGTTGAAGTAA+GGG 0.583379 1_4:+2181144 Msa0143290:CDS
TATATCTAAGGCATCAGAAG+TGG 0.584137 1_4:+2181480 Msa0143290:CDS
TTGCTCGTAAATCTTCGTCA+AGG 0.584306 1_4:+2181317 Msa0143290:CDS
GTGATTTGATCTGGGCTAGA+GGG 0.584549 1_4:-2184072 None:intergenic
CAGTTAAGGCCCTCAAAGAA+GGG 0.585077 1_4:-2184433 None:intergenic
CAAAGTCCAAACCATTCTTG+AGG 0.588523 1_4:-2180933 None:intergenic
AGTGATTTGATCTGGGCTAG+AGG 0.588987 1_4:-2184073 None:intergenic
CGAAGAAACATTAGCAAACG+TGG 0.592187 1_4:+2184276 Msa0143290:CDS
ACTTCGCGACGATGAAGTCC+CGG 0.592583 1_4:-2181785 None:intergenic
CCCGAGATCATCAAAGAAGA+GGG 0.593180 1_4:+2184166 Msa0143290:CDS
TACTTCTGTTAATGGCAGCA+GGG 0.594412 1_4:+2182029 Msa0143290:CDS
CCTTTACTCTCAGCAATGTG+AGG 0.595127 1_4:-2181610 None:intergenic
TCAGCTGTATTAGAAAGAGA+TGG 0.598305 1_4:-2181895 None:intergenic
AAGCAAGGGATCTGATTAGA+GGG 0.598406 1_4:+2184344 Msa0143290:CDS
AAGCATGAAACTTGACAAGT+TGG 0.599073 1_4:-2183998 None:intergenic
GAGCAGGGAGCCACAAATGT+GGG 0.599532 1_4:-2184637 None:intergenic
AGCTGGTTTGTGAAAGATGT+AGG 0.599964 1_4:+2182202 Msa0143290:CDS
CTGCATTTGAGCATGTCGAA+TGG 0.600200 1_4:-2182556 None:intergenic
TCCAGGACTAGTAGAGTCCA+AGG 0.602137 1_4:-2182271 None:intergenic
CAGTAGGCCTCACATGTCAA+AGG 0.602441 1_4:+2182518 Msa0143290:CDS
GTGTCAAATTCTGGACGGAA+AGG 0.603775 1_4:+2181979 Msa0143290:CDS
TGGCTGAGCCCACTGATGCA+AGG 0.607749 1_4:+2184107 Msa0143290:CDS
GAGTTTGACCTTGCATCAGT+GGG 0.609693 1_4:-2184115 None:intergenic
GAGTAAGAAGAAAGTGAAGG+AGG 0.611485 1_4:+2182113 Msa0143290:CDS
CAAGAATATCAGAGGTTGGG+AGG 0.611585 1_4:+2181539 Msa0143290:CDS
TCCACAAGTTGGAAATTCTG+AGG 0.619594 1_4:+2181423 Msa0143290:CDS
TATAGGCAAAGCAGTTGCAA+AGG 0.620210 1_4:+2182362 Msa0143290:CDS
ACATGTCAAAGGATGTTAGG+TGG 0.622053 1_4:+2182529 Msa0143290:CDS
GAGGACCGAAGTATAGGGAA+AGG 0.622415 1_4:+2181166 Msa0143290:CDS
TGTGCAAGTACTCCAGAGCA+AGG 0.622812 1_4:-2183775 None:intergenic
CACCATAAAATCAAGACACA+AGG 0.624437 1_4:-2180991 None:intergenic
AGCTTCTCCAAGAATATCAG+AGG 0.624562 1_4:+2181531 Msa0143290:CDS
CAAAATCAGTGAGCATAATG+TGG 0.625195 1_4:-2183856 None:intergenic
CATCTCCAATATATGGAGCA+GGG 0.625318 1_4:-2184652 None:intergenic
TCCGAGTAAGAAGAAAGTGA+AGG 0.625965 1_4:+2182110 Msa0143290:CDS
TGAAATAGTTGAAGTAAGGG+AGG 0.632516 1_4:+2181147 Msa0143290:CDS
GGAGCAGGGAGCCACAAATG+TGG 0.634510 1_4:-2184638 None:intergenic
GTCATGGAGTATTGTCCAGG+TGG 0.637510 1_4:+2182831 Msa0143290:CDS
ATGGTGCTGCAGTTGACTGG+TGG 0.645771 1_4:+2184191 Msa0143290:CDS
CTGATGCCTTAGATATACAA+AGG 0.647139 1_4:-2181474 None:intergenic
GTGCGCTTTAGAAGATACAA+AGG 0.647872 1_4:+2182224 Msa0143290:CDS
AAAACTCTGGAAGTTCTGGT+GGG 0.647935 1_4:-2184477 None:intergenic
TTTGGACTTTGGATTCATTG+TGG 0.649242 1_4:+2180945 Msa0143290:five_prime_UTR
ATTGTGCGAGGGGTATGGTG+TGG 0.650294 1_4:-2182063 None:intergenic
TTTCCAACTTGTGGAGACCG+CGG 0.651926 1_4:-2181415 None:intergenic
ACGAAGGAAGAAGATGCCTA+GGG 0.654290 1_4:+2182716 Msa0143290:CDS
GACATGGCATCACAAGGCAA+GGG 0.654668 1_4:+2184517 Msa0143290:CDS
TGGCTGTGTCAAATTCTGGA+CGG 0.655084 1_4:+2181974 Msa0143290:CDS
CGATGACAATGGGTGTTCCG+CGG 0.658695 1_4:+2181398 Msa0143290:CDS
TGGGTCTCAATCACAGCGTG+TGG 0.662415 1_4:+2181834 Msa0143290:CDS
ATGTAATGTAGGACAGCACG+TGG 0.664748 1_4:+2184555 Msa0143290:CDS
GATACAGACATTGTACAGTA+CGG 0.668230 1_4:+2181561 Msa0143290:CDS
AGAACATGAAGATCTCCACC+TGG 0.672619 1_4:-2182846 None:intergenic
CGACATGCTCAAATGCAGCA+CGG 0.673800 1_4:+2182561 Msa0143290:CDS
CTAACATCCTTTGACATGTG+AGG 0.674925 1_4:-2182525 None:intergenic
ATCATCAAAGAAGAGGGACA+TGG 0.679492 1_4:+2184172 Msa0143290:CDS
AGTGATGAGAGCAACATGAG+TGG 0.682879 1_4:+2182483 Msa0143290:CDS
CAAGTTGGTTGAATGCACAA+TGG 0.726400 1_4:-2183983 None:intergenic
ACAGACATTGTACAGTACGG+TGG 0.732794 1_4:+2181564 Msa0143290:CDS
ACAATGTAGGAAGAAACGGA+TGG 0.735708 1_4:-2182773 None:intergenic
GCAAGTACTCCAGAGCAAGG+AGG 0.758663 1_4:-2183772 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTAATTTTATTTT+TGG + chr1_4:2180395-2180414 Msa0143290:intron 0.0%
!!! ATTTTTTTAATTTTATTTTT+GGG + chr1_4:2180396-2180415 Msa0143290:intron 0.0%
!! CAAATTTAGATAATAAAAAT+TGG + chr1_4:2180222-2180241 Msa0143290:intron 10.0%
!! TTTACATAAAAAAAAATATC+TGG - chr1_4:2180274-2180293 None:intergenic 10.0%
!!! ATTTAGTATGATTTTTTTTT+TGG + chr1_4:2180370-2180389 Msa0143290:intron 10.0%
!! GCATAAATATATATATTAAT+AGG - chr1_4:2180832-2180851 None:intergenic 10.0%
!! TAATATATATATTTATGCTT+TGG + chr1_4:2180834-2180853 Msa0143290:intron 10.0%
!!! TAGTGACATATAAAATTTTA+AGG + chr1_4:2180460-2180479 Msa0143290:intron 15.0%
!! ACATATTTATTTGTATGTAT+TGG + chr1_4:2180735-2180754 Msa0143290:intron 15.0%
!!! ATTCTAACTCTAAAATTTAA+AGG - chr1_4:2183532-2183551 None:intergenic 15.0%
!!! TTTAAATTTTAGAGTTAGAA+TGG + chr1_4:2183531-2183550 Msa0143290:intron 15.0%
!!! TTTTTGAGTTTTTGTTAATC+TGG + chr1_4:2180311-2180330 Msa0143290:intron 20.0%
!!! ATAAAATTTTAAGGTTGTCT+TGG + chr1_4:2180469-2180488 Msa0143290:intron 20.0%
!! CCCATTATAAGAAAAATTAT+GGG - chr1_4:2181109-2181128 None:intergenic 20.0%
!!! CCCATAATTTTTCTTATAAT+GGG + chr1_4:2181106-2181125 Msa0143290:exon 20.0%
!! ACCCATTATAAGAAAAATTA+TGG - chr1_4:2181110-2181129 None:intergenic 20.0%
!!! ACTTTATTACCTAACTTTTT+AGG - chr1_4:2181955-2181974 None:intergenic 20.0%
!! TAAAAAGTTAGGTAATAAAG+TGG + chr1_4:2181954-2181973 Msa0143290:CDS 20.0%
!! TAGTTCATATAAACCTTATT+CGG + chr1_4:2182323-2182342 Msa0143290:CDS 20.0%
!! ATTGCTTAACTATATTGATA+TGG + chr1_4:2183191-2183210 Msa0143290:intron 20.0%
!! ATTGCTTAACTATATTGATA+TGG + chr1_4:2183191-2183210 Msa0143290:intron 20.0%
!!! TTTCTTTATGAGCTTTTATA+TGG + chr1_4:2184226-2184245 Msa0143290:CDS 20.0%
!!! AAGTATTTAGAATGTAATGT+AGG + chr1_4:2184544-2184563 Msa0143290:CDS 20.0%
! ACATAATCAATACCAAAAAG+TGG - chr1_4:2180067-2180086 None:intergenic 25.0%
! ATAAGCAAAAACTGTTAATC+AGG - chr1_4:2180091-2180110 None:intergenic 25.0%
! TCTAAGTTCAAAATTGCATA+GGG - chr1_4:2180129-2180148 None:intergenic 25.0%
! ATCTAAGTTCAAAATTGCAT+AGG - chr1_4:2180130-2180149 None:intergenic 25.0%
! AAATTTCATCTAAACAGATC+AGG - chr1_4:2180349-2180368 None:intergenic 25.0%
! GCTAAGATTTCAGAATTAAT+TGG + chr1_4:2180436-2180455 Msa0143290:intron 25.0%
! GTAATTGTTGGTATTATAGT+GGG - chr1_4:2180556-2180575 None:intergenic 25.0%
! AGTAATTGTTGGTATTATAG+TGG - chr1_4:2180557-2180576 None:intergenic 25.0%
!!! TATCCAACTGTTTTTTGAAA+CGG - chr1_4:2180588-2180607 None:intergenic 25.0%
! AAATGTCAATAATCGTATCA+GGG + chr1_4:2180873-2180892 Msa0143290:intron 25.0%
! ATGTAGTAAAATTAGTGAGT+TGG + chr1_4:2181029-2181048 Msa0143290:five_prime_UTR 25.0%
! TGTAGTAAAATTAGTGAGTT+GGG + chr1_4:2181030-2181049 Msa0143290:five_prime_UTR 25.0%
!! GCCCATAATTTTTCTTATAA+TGG + chr1_4:2181105-2181124 Msa0143290:exon 25.0%
! TTGTGAAATAGTTGAAGTAA+GGG + chr1_4:2181144-2181163 Msa0143290:CDS 25.0%
! GAAAAAAAATAAGAAGCCTT+TGG + chr1_4:2181234-2181253 Msa0143290:CDS 25.0%
!!! TTCAATCTTTTGAAGAAACT+TGG + chr1_4:2182603-2182622 Msa0143290:CDS 25.0%
!!! AAGTTGTTTGTTTGCTATTA+AGG + chr1_4:2182671-2182690 Msa0143290:CDS 25.0%
! AAACTGAAAGAGAAATCTTA+AGG + chr1_4:2182742-2182761 Msa0143290:CDS 25.0%
! ATCAGATAATCTTTCATGTT+TGG + chr1_4:2182809-2182828 Msa0143290:CDS 25.0%
! CATATATTATACAGAAACAC+AGG - chr1_4:2183167-2183186 None:intergenic 25.0%
! CATATATTATACAGAAACAC+AGG - chr1_4:2183167-2183186 None:intergenic 25.0%
!! TGACTTTATTTAGATTCTTC+AGG - chr1_4:2183448-2183467 None:intergenic 25.0%
! AGTTTCACTTTGATTACTTA+CGG + chr1_4:2183474-2183493 Msa0143290:intron 25.0%
! AAAGTTACATCTCCAATATA+TGG - chr1_4:2184662-2184681 None:intergenic 25.0%
! TTTATGTACACGTAAAAACT+AGG + chr1_4:2184680-2184699 Msa0143290:three_prime_UTR 25.0%
! ACGTAAAAACTAGGAATTTA+AGG + chr1_4:2184689-2184708 Msa0143290:three_prime_UTR 25.0%
ACTGAAGGAATATGTTGAAA+CGG - chr1_4:2180018-2180037 None:intergenic 30.0%
GAAAAATGAGTAGTAGTTGT+TGG + chr1_4:2180193-2180212 Msa0143290:intron 30.0%
!!! AAATTTTAAGGTTGTCTTGG+TGG + chr1_4:2180472-2180491 Msa0143290:intron 30.0%
AAAAAACAGTTGGATAGTGA+CGG + chr1_4:2180592-2180611 Msa0143290:intron 30.0%
!! ATCTGTCAACTCTTTTGTTT+TGG + chr1_4:2180638-2180657 Msa0143290:intron 30.0%
CAAATGTCAATAATCGTATC+AGG + chr1_4:2180872-2180891 Msa0143290:intron 30.0%
AGTGAATATAACCTCAAGAA+TGG + chr1_4:2180922-2180941 Msa0143290:five_prime_UTR 30.0%
ATATAACCTCAAGAATGGTT+TGG + chr1_4:2180927-2180946 Msa0143290:five_prime_UTR 30.0%
! TTCCTTGTGTCTTGATTTTA+TGG + chr1_4:2180989-2181008 Msa0143290:five_prime_UTR 30.0%
!! CTTATAATGGGTTCATTATC+TGG + chr1_4:2181118-2181137 Msa0143290:exon 30.0%
CTTGTGAAATAGTTGAAGTA+AGG + chr1_4:2181143-2181162 Msa0143290:CDS 30.0%
!!! AGACATTTTTTTCTGAGACT+TGG - chr1_4:2181212-2181231 None:intergenic 30.0%
TTAAAAAAGCCGATGACAAT+GGG + chr1_4:2181388-2181407 Msa0143290:CDS 30.0%
AAGAGACCTTTGTATATCTA+AGG + chr1_4:2181468-2181487 Msa0143290:CDS 30.0%
! TTTTATTGAATGAGAGTGAC+TGG - chr1_4:2181672-2181691 None:intergenic 30.0%
AATTTCCCAAGCAGAATTAA+TGG - chr1_4:2181740-2181759 None:intergenic 30.0%
TCTTCATCTACTTCTGTTAA+TGG + chr1_4:2182021-2182040 Msa0143290:CDS 30.0%
TTGCTAACTTCATTTGATGT+AGG - chr1_4:2182162-2182181 None:intergenic 30.0%
AAAGGAAGAAAAAAACCAAG+AGG + chr1_4:2182242-2182261 Msa0143290:CDS 30.0%
AGAAAAAAACCAAGAGGTAA+TGG + chr1_4:2182248-2182267 Msa0143290:CDS 30.0%
GCATCAAATAGTGGTAATAT+AGG + chr1_4:2182345-2182364 Msa0143290:CDS 30.0%
!! TTTGTTTGCTATTAAGGTCA+TGG + chr1_4:2182677-2182696 Msa0143290:CDS 30.0%
ACATACAATGTAGGAAGAAA+CGG - chr1_4:2182780-2182799 None:intergenic 30.0%
GTAAATTGCACATACAATGT+AGG - chr1_4:2182789-2182808 None:intergenic 30.0%
TAATCTTTCATGTTTGGTCA+TGG + chr1_4:2182815-2182834 Msa0143290:CDS 30.0%
ACAACACAAATTTAACAGGA+AGG - chr1_4:2182980-2182999 None:intergenic 30.0%
TTGCACAACACAAATTTAAC+AGG - chr1_4:2182984-2183003 None:intergenic 30.0%
TTGTGCAACAAAAGATAAGA+TGG + chr1_4:2182996-2183015 Msa0143290:intron 30.0%
!! ATTTGTGTTTGTTGTGTATC+AGG - chr1_4:2183033-2183052 None:intergenic 30.0%
AAAATAGATCTACGTGATAC+AGG - chr1_4:2183107-2183126 None:intergenic 30.0%
GATAATTTAGATTCTTCAGG+TGG - chr1_4:2183277-2183296 None:intergenic 30.0%
CTGGATAATTTAGATTCTTC+AGG - chr1_4:2183280-2183299 None:intergenic 30.0%
! CTTTATTTAGATTCTTCAGG+TGG - chr1_4:2183445-2183464 None:intergenic 30.0%
GTTTCACTTTGATTACTTAC+GGG + chr1_4:2183475-2183494 Msa0143290:intron 30.0%
CAGTTACTATCAACAATGAA+TGG - chr1_4:2183505-2183524 None:intergenic 30.0%
ATTTCTTGCACAGTTTATTG+TGG + chr1_4:2183686-2183705 Msa0143290:intron 30.0%
TTTCTTGCACAGTTTATTGT+GGG + chr1_4:2183687-2183706 Msa0143290:intron 30.0%
AAACCTGCATGATAAATGTA+TGG - chr1_4:2183738-2183757 None:intergenic 30.0%
!!! TGTTTTCAGGTTTCAAATCA+CGG - chr1_4:2183817-2183836 None:intergenic 30.0%
!! AAGATGATTTCAGAAGTGTT+GGG - chr1_4:2183907-2183926 None:intergenic 30.0%
TCGTTGTTAGAACCTTTAAA+GGG - chr1_4:2184259-2184278 None:intergenic 30.0%
TTCGTTGTTAGAACCTTTAA+AGG - chr1_4:2184260-2184279 None:intergenic 30.0%
!!! TGATTTTGGAGTTTTAGACA+TGG + chr1_4:2184501-2184520 Msa0143290:CDS 30.0%
!!! TGTTTTAAAGACATTGCTCT+TGG + chr1_4:2184587-2184606 Msa0143290:exon 30.0%
CTGAAGGAATATGTTGAAAC+GGG - chr1_4:2180017-2180036 None:intergenic 35.0%
!! CAACGTTTTCTTCCACTTTT+TGG + chr1_4:2180052-2180071 Msa0143290:five_prime_UTR 35.0%
ATCAAACCGCAAAAGCAAAA+GGG - chr1_4:2180166-2180185 None:intergenic 35.0%
AATCAAACCGCAAAAGCAAA+AGG - chr1_4:2180167-2180186 None:intergenic 35.0%
CGGCAAGTATTAGTAATTGT+TGG - chr1_4:2180568-2180587 None:intergenic 35.0%
! TTGCCGTTTCAAAAAACAGT+TGG + chr1_4:2180582-2180601 Msa0143290:intron 35.0%
! AAAGGTACATCTAACTTCCA+AGG - chr1_4:2180773-2180792 None:intergenic 35.0%
TTTGGACTTTGGATTCATTG+TGG + chr1_4:2180945-2180964 Msa0143290:five_prime_UTR 35.0%
TTTGGATTCATTGTGGAAGT+TGG + chr1_4:2180952-2180971 Msa0143290:five_prime_UTR 35.0%
CACCATAAAATCAAGACACA+AGG - chr1_4:2180994-2181013 None:intergenic 35.0%
TGAAATAGTTGAAGTAAGGG+AGG + chr1_4:2181147-2181166 Msa0143290:CDS 35.0%
!!! TTTTTTTCTGAGACTTGGAC+TGG - chr1_4:2181207-2181226 None:intergenic 35.0%
TTATCCTTGTATCCCAAGTT+CGG - chr1_4:2181262-2181281 None:intergenic 35.0%
TAAATCTTCGTCAAGGGATT+TGG + chr1_4:2181324-2181343 Msa0143290:CDS 35.0%
AAATCTTCGTCAAGGGATTT+GGG + chr1_4:2181325-2181344 Msa0143290:CDS 35.0%
!!! CATTGTCATCGGCTTTTTTA+AGG - chr1_4:2181389-2181408 None:intergenic 35.0%
CTTAAAAAAGCCGATGACAA+TGG + chr1_4:2181387-2181406 Msa0143290:CDS 35.0%
CTGATGCCTTAGATATACAA+AGG - chr1_4:2181477-2181496 None:intergenic 35.0%
! TATATCTAAGGCATCAGAAG+TGG + chr1_4:2181480-2181499 Msa0143290:CDS 35.0%
GATACAGACATTGTACAGTA+CGG + chr1_4:2181561-2181580 Msa0143290:CDS 35.0%
! TTGACTCGATGATGTGATTT+GGG - chr1_4:2181716-2181735 None:intergenic 35.0%
TCAAGCCATTAATTCTGCTT+GGG + chr1_4:2181732-2181751 Msa0143290:CDS 35.0%
GCAACTAATCAACTTCATTC+CGG + chr1_4:2181766-2181785 Msa0143290:CDS 35.0%
CAACTAATCAACTTCATTCC+GGG + chr1_4:2181767-2181786 Msa0143290:CDS 35.0%
CATGTTCATCAAGTAGAGTT+GGG + chr1_4:2181815-2181834 Msa0143290:CDS 35.0%
TCAGCTGTATTAGAAAGAGA+TGG - chr1_4:2181898-2181917 None:intergenic 35.0%
GCTTCTTCACCTAAAAAGTT+AGG + chr1_4:2181943-2181962 Msa0143290:CDS 35.0%
!!! TGACCATTTTAATTGTGCGA+GGG - chr1_4:2182077-2182096 None:intergenic 35.0%
!!! ATGACCATTTTAATTGTGCG+AGG - chr1_4:2182078-2182097 None:intergenic 35.0%
TCCTTCACTTTCTTCTTACT+CGG - chr1_4:2182114-2182133 None:intergenic 35.0%
!! CTTTTGAAGAAACTTGGTTG+CGG + chr1_4:2182609-2182628 Msa0143290:CDS 35.0%
GTATATCTTGCCGAACTAAT+TGG + chr1_4:2182645-2182664 Msa0143290:CDS 35.0%
ACAACTTGTGCCAATTAGTT+CGG - chr1_4:2182658-2182677 None:intergenic 35.0%
AAGAGAAATCTTAAGGATGC+TGG + chr1_4:2182749-2182768 Msa0143290:CDS 35.0%
! GATATGGTTCTGTGAATCAT+AGG + chr1_4:2183207-2183226 Msa0143290:intron 35.0%
! GATATGGTTCTGTGAATCAT+AGG + chr1_4:2183207-2183226 Msa0143290:intron 35.0%
ACAAACTCTATCAGTTACTC+TGG + chr1_4:2183561-2183580 Msa0143290:intron 35.0%
!! ACTTCTTCTAGCATTGACAA+AGG + chr1_4:2183627-2183646 Msa0143290:intron 35.0%
AGGATGCACTGTTTCAATTA+TGG + chr1_4:2183647-2183666 Msa0143290:intron 35.0%
CTTCCATACATTTATCATGC+AGG + chr1_4:2183732-2183751 Msa0143290:intron 35.0%
! TCTCGAACAAGAATGTTTTC+AGG - chr1_4:2183830-2183849 None:intergenic 35.0%
AACATTCTTGTTCGAGAAGA+CGG + chr1_4:2183833-2183852 Msa0143290:CDS 35.0%
CAAAATCAGTGAGCATAATG+TGG - chr1_4:2183859-2183878 None:intergenic 35.0%
! GAAGATGATTTCAGAAGTGT+TGG - chr1_4:2183908-2183927 None:intergenic 35.0%
AAGCATGAAACTTGACAAGT+TGG - chr1_4:2184001-2184020 None:intergenic 35.0%
TATGGAAGAACACCCTTTAA+AGG + chr1_4:2184244-2184263 Msa0143290:CDS 35.0%
TTGCTTCGAAACTGACAAAT+GGG - chr1_4:2184330-2184349 None:intergenic 35.0%
ATTTGTCAGTTTCGAAGCAA+GGG + chr1_4:2184330-2184349 Msa0143290:CDS 35.0%
TAAAGAACCTGAAAACCGTT+TGG + chr1_4:2184375-2184394 Msa0143290:CDS 35.0%
AAAGAACCTGAAAACCGTTT+GGG + chr1_4:2184376-2184395 Msa0143290:CDS 35.0%
! GAAGGGATGTTGTTTAATCT+CGG - chr1_4:2184419-2184438 None:intergenic 35.0%
TAAACAACATCCCTTCTTTG+AGG + chr1_4:2184423-2184442 Msa0143290:CDS 35.0%
AAACAACATCCCTTCTTTGA+GGG + chr1_4:2184424-2184443 Msa0143290:CDS 35.0%
!! CTTCCAGAGTTTTGTGATTT+TGG + chr1_4:2184487-2184506 Msa0143290:CDS 35.0%
ACTCCAAAATCACAAAACTC+TGG - chr1_4:2184493-2184512 None:intergenic 35.0%
AATGAAGAAGCTTGTCTCGT+AGG - chr1_4:2179956-2179975 None:intergenic 40.0%
!! CTAATCGAGCATTGAAGACT+CGG - chr1_4:2179979-2179998 None:intergenic 40.0%
GAGTCTTCAATGCTCGATTA+GGG + chr1_4:2179978-2179997 Msa0143290:five_prime_UTR 40.0%
GAAGATGGTGTTTGAACTGA+AGG - chr1_4:2180033-2180052 None:intergenic 40.0%
GTGGAAGAAAACGTTGAAGA+TGG - chr1_4:2180048-2180067 None:intergenic 40.0%
!! TTTCGACCCTTTTGCTTTTG+CGG + chr1_4:2180157-2180176 Msa0143290:intron 40.0%
! TTTAAGGTTGTCTTGGTGGT+TGG + chr1_4:2180476-2180495 Msa0143290:intron 40.0%
! TTAAGGTTGTCTTGGTGGTT+GGG + chr1_4:2180477-2180496 Msa0143290:intron 40.0%
! TTGGTATTATAGTGGGAGTG+GGG - chr1_4:2180549-2180568 None:intergenic 40.0%
! GTTGGTATTATAGTGGGAGT+GGG - chr1_4:2180550-2180569 None:intergenic 40.0%
! TGTTGGTATTATAGTGGGAG+TGG - chr1_4:2180551-2180570 None:intergenic 40.0%
! ACATGCTAGAGAAGTGCAAA+AGG - chr1_4:2180791-2180810 None:intergenic 40.0%
CAAAGTCCAAACCATTCTTG+AGG - chr1_4:2180936-2180955 None:intergenic 40.0%
! CTCAAGAATGGTTTGGACTT+TGG + chr1_4:2180934-2180953 Msa0143290:five_prime_UTR 40.0%
CACAAACACTTCTACTCTCA+AGG - chr1_4:2181056-2181075 None:intergenic 40.0%
TTGCTCGTAAATCTTCGTCA+AGG + chr1_4:2181317-2181336 Msa0143290:CDS 40.0%
TGCTCGTAAATCTTCGTCAA+GGG + chr1_4:2181318-2181337 Msa0143290:CDS 40.0%
GATTTGGGCATTTCACAAGA+TGG + chr1_4:2181340-2181359 Msa0143290:CDS 40.0%
! TCCACAAGTTGGAAATTCTG+AGG + chr1_4:2181423-2181442 Msa0143290:CDS 40.0%
! TGAGGCTGTTAATTTGAAGC+AGG + chr1_4:2181441-2181460 Msa0143290:CDS 40.0%
AGCTTCTCCAAGAATATCAG+AGG + chr1_4:2181531-2181550 Msa0143290:CDS 40.0%
TCTCCAAGAATATCAGAGGT+TGG + chr1_4:2181535-2181554 Msa0143290:CDS 40.0%
CTCCAAGAATATCAGAGGTT+GGG + chr1_4:2181536-2181555 Msa0143290:CDS 40.0%
TAGATGAAGCCAGTCATTCT+GGG + chr1_4:2181587-2181606 Msa0143290:CDS 40.0%
CTCACATTGCTGAGAGTAAA+GGG + chr1_4:2181611-2181630 Msa0143290:CDS 40.0%
! CTTGACTCGATGATGTGATT+TGG - chr1_4:2181717-2181736 None:intergenic 40.0%
GTCAAGCCATTAATTCTGCT+TGG + chr1_4:2181731-2181750 Msa0143290:CDS 40.0%
GCATGTTCATCAAGTAGAGT+TGG + chr1_4:2181814-2181833 Msa0143290:CDS 40.0%
!!! GTTTGCTTTTCTGGTTGAAC+AGG - chr1_4:2181862-2181881 None:intergenic 40.0%
AAAGAGATGGAGAAGATGCA+GGG - chr1_4:2181885-2181904 None:intergenic 40.0%
AAAGTGGCTGTGTCAAATTC+TGG + chr1_4:2181970-2181989 Msa0143290:CDS 40.0%
TACTTCTGTTAATGGCAGCA+GGG + chr1_4:2182029-2182048 Msa0143290:CDS 40.0%
!! TTTTAATTGTGCGAGGGGTA+TGG - chr1_4:2182071-2182090 None:intergenic 40.0%
TACCCCTCGCACAATTAAAA+TGG + chr1_4:2182071-2182090 Msa0143290:CDS 40.0%
!!! GACCATTTTAATTGTGCGAG+GGG - chr1_4:2182076-2182095 None:intergenic 40.0%
TCCGAGTAAGAAGAAAGTGA+AGG + chr1_4:2182110-2182129 Msa0143290:CDS 40.0%
GAGTAAGAAGAAAGTGAAGG+AGG + chr1_4:2182113-2182132 Msa0143290:CDS 40.0%
!! AGCTGGTTTGTGAAAGATGT+AGG + chr1_4:2182202-2182221 Msa0143290:CDS 40.0%
!! GTGCGCTTTAGAAGATACAA+AGG + chr1_4:2182224-2182243 Msa0143290:CDS 40.0%
CCACTATTTGATGCCGAATA+AGG - chr1_4:2182339-2182358 None:intergenic 40.0%
CCTTATTCGGCATCAAATAG+TGG + chr1_4:2182336-2182355 Msa0143290:CDS 40.0%
TATAGGCAAAGCAGTTGCAA+AGG + chr1_4:2182362-2182381 Msa0143290:CDS 40.0%
CAAAGCTCAAAGAGTAGTCA+AGG + chr1_4:2182435-2182454 Msa0143290:CDS 40.0%
CTAACATCCTTTGACATGTG+AGG - chr1_4:2182528-2182547 None:intergenic 40.0%
CTCACATGTCAAAGGATGTT+AGG + chr1_4:2182526-2182545 Msa0143290:CDS 40.0%
ACATGTCAAAGGATGTTAGG+TGG + chr1_4:2182529-2182548 Msa0143290:CDS 40.0%
CATGTCAAAGGATGTTAGGT+GGG + chr1_4:2182530-2182549 Msa0143290:CDS 40.0%
! GGTCATGGACATCGAATTTT+TGG + chr1_4:2182692-2182711 Msa0143290:CDS 40.0%
!!! ACATCGAATTTTTGGCACGA+AGG + chr1_4:2182700-2182719 Msa0143290:CDS 40.0%
ACAATGTAGGAAGAAACGGA+TGG - chr1_4:2182776-2182795 None:intergenic 40.0%
GTGGAGATCTTCATGTTCTA+CGG + chr1_4:2182850-2182869 Msa0143290:CDS 40.0%
! TTTTATCCAGCGCATTCAAG+TGG + chr1_4:2183123-2183142 Msa0143290:intron 40.0%
AATTATCCAGCGCATTCAAG+TGG + chr1_4:2183290-2183309 Msa0143290:intron 40.0%
CTATCAGTTACTCTGGTTAC+TGG + chr1_4:2183568-2183587 Msa0143290:intron 40.0%
TTTATCTTGCCCTCTGCTAT+TGG + chr1_4:2183600-2183619 Msa0143290:intron 40.0%
!! CTGATTTTGATCTGTCGTTG+AGG + chr1_4:2183870-2183889 Msa0143290:CDS 40.0%
ATTGACCCTGCAAAAGTTTC+TGG + chr1_4:2183932-2183951 Msa0143290:CDS 40.0%
TTGACCCTGCAAAAGTTTCT+GGG + chr1_4:2183933-2183952 Msa0143290:CDS 40.0%
!! CAAGTTGGTTGAATGCACAA+TGG - chr1_4:2183986-2184005 None:intergenic 40.0%
GCAAGGTCAAACTCATTTGT+TGG + chr1_4:2184124-2184143 Msa0143290:CDS 40.0%
! TCCCTCTTCTTTGATGATCT+CGG - chr1_4:2184170-2184189 None:intergenic 40.0%
ATCATCAAAGAAGAGGGACA+TGG + chr1_4:2184172-2184191 Msa0143290:CDS 40.0%
CGAAGAAACATTAGCAAACG+TGG + chr1_4:2184276-2184295 Msa0143290:CDS 40.0%
AACTGACAAATGGGTCATCA+GGG - chr1_4:2184321-2184340 None:intergenic 40.0%
AAACTGACAAATGGGTCATC+AGG - chr1_4:2184322-2184341 None:intergenic 40.0%
CTTGCTTCGAAACTGACAAA+TGG - chr1_4:2184331-2184350 None:intergenic 40.0%
CATTTGTCAGTTTCGAAGCA+AGG + chr1_4:2184329-2184348 Msa0143290:CDS 40.0%
AAGCAAGGGATCTGATTAGA+GGG + chr1_4:2184344-2184363 Msa0143290:CDS 40.0%
AACGAATTAAGGCCCAGTTA+AGG - chr1_4:2184450-2184469 None:intergenic 40.0%
! AAAACTCTGGAAGTTCTGGT+GGG - chr1_4:2184480-2184499 None:intergenic 40.0%
! TCACAAAACTCTGGAAGTTC+TGG - chr1_4:2184484-2184503 None:intergenic 40.0%
!! GTTTTAGACATGGCATCACA+AGG + chr1_4:2184511-2184530 Msa0143290:CDS 40.0%
! TTAACCGATTCCCACATTTG+TGG + chr1_4:2184627-2184646 Msa0143290:three_prime_UTR 40.0%
CATCTCCAATATATGGAGCA+GGG - chr1_4:2184655-2184674 None:intergenic 40.0%
ACATCTCCAATATATGGAGC+AGG - chr1_4:2184656-2184675 None:intergenic 40.0%
CGAGTCTTCAATGCTCGATT+AGG + chr1_4:2179977-2179996 Msa0143290:five_prime_UTR 45.0%
! TAAGGTTGTCTTGGTGGTTG+GGG + chr1_4:2180478-2180497 Msa0143290:intron 45.0%
TCTTAGAGCTTGTCAGCATG+TGG + chr1_4:2180700-2180719 Msa0143290:intron 45.0%
ATTGGAGCATGCATGTACCT+TGG + chr1_4:2180753-2180772 Msa0143290:intron 45.0%
TAAGGGAGGACCGAAGTATA+GGG + chr1_4:2181161-2181180 Msa0143290:CDS 45.0%
TAGCGCCTTTCCCTATACTT+CGG - chr1_4:2181174-2181193 None:intergenic 45.0%
GCCTCAGAATTTCCAACTTG+TGG - chr1_4:2181427-2181446 None:intergenic 45.0%
CAGAAGTGGCTTCCATGAAA+CGG + chr1_4:2181494-2181513 Msa0143290:CDS 45.0%
TGACTTCGATAGCCGTTTCA+TGG - chr1_4:2181509-2181528 None:intergenic 45.0%
CTCCCAACCTCTGATATTCT+TGG - chr1_4:2181541-2181560 None:intergenic 45.0%
CAAGAATATCAGAGGTTGGG+AGG + chr1_4:2181539-2181558 Msa0143290:CDS 45.0%
ACAGACATTGTACAGTACGG+TGG + chr1_4:2181564-2181583 Msa0143290:CDS 45.0%
GTAGATGAAGCCAGTCATTC+TGG + chr1_4:2181586-2181605 Msa0143290:CDS 45.0%
CCTTTACTCTCAGCAATGTG+AGG - chr1_4:2181613-2181632 None:intergenic 45.0%
CCTCACATTGCTGAGAGTAA+AGG + chr1_4:2181610-2181629 Msa0143290:CDS 45.0%
TGAGAGTAAAGGGCGAAGAA+TGG + chr1_4:2181621-2181640 Msa0143290:CDS 45.0%
AAGAGATGGAGAAGATGCAG+GGG - chr1_4:2181884-2181903 None:intergenic 45.0%
GAAAGAGATGGAGAAGATGC+AGG - chr1_4:2181886-2181905 None:intergenic 45.0%
TGGCTGTGTCAAATTCTGGA+CGG + chr1_4:2181974-2181993 Msa0143290:CDS 45.0%
GTGTCAAATTCTGGACGGAA+AGG + chr1_4:2181979-2181998 Msa0143290:CDS 45.0%
CAAATTCTGGACGGAAAGGT+AGG + chr1_4:2181983-2182002 Msa0143290:CDS 45.0%
CTACTTCTGTTAATGGCAGC+AGG + chr1_4:2182028-2182047 Msa0143290:CDS 45.0%
GAAGTTAGCAAGTCTGTTCC+TGG + chr1_4:2182171-2182190 Msa0143290:CDS 45.0%
! AAACCAAGAGGTAATGGCCT+TGG + chr1_4:2182254-2182273 Msa0143290:CDS 45.0%
GACTCTACTAGTCCTGGAAA+CGG + chr1_4:2182276-2182295 Msa0143290:CDS 45.0%
! CTCGAGTTGCTCTTTCAACT+TGG - chr1_4:2182409-2182428 None:intergenic 45.0%
ACTCATGTTGCTCTCATCAC+TGG - chr1_4:2182484-2182503 None:intergenic 45.0%
AGTGATGAGAGCAACATGAG+TGG + chr1_4:2182483-2182502 Msa0143290:CDS 45.0%
! AACATGAGTGGCTCAAGTTG+CGG + chr1_4:2182495-2182514 Msa0143290:CDS 45.0%
CTGCATTTGAGCATGTCGAA+TGG - chr1_4:2182559-2182578 None:intergenic 45.0%
! TCAAATGCAGCACGGAGTTT+TGG + chr1_4:2182569-2182588 Msa0143290:CDS 45.0%
! CAAATGCAGCACGGAGTTTT+GGG + chr1_4:2182570-2182589 Msa0143290:CDS 45.0%
AAACTTGGTTGCGGAGACAT+TGG + chr1_4:2182618-2182637 Msa0143290:CDS 45.0%
AACTTGGTTGCGGAGACATT+GGG + chr1_4:2182619-2182638 Msa0143290:CDS 45.0%
ACGAAGGAAGAAGATGCCTA+GGG + chr1_4:2182716-2182735 Msa0143290:CDS 45.0%
TCTCTTTCAGTTTGAGCCCT+AGG - chr1_4:2182735-2182754 None:intergenic 45.0%
!! TTGGTCATGGAGTATTGTCC+AGG + chr1_4:2182828-2182847 Msa0143290:CDS 45.0%
AGAACATGAAGATCTCCACC+TGG - chr1_4:2182849-2182868 None:intergenic 45.0%
!! GTTTTTCAGAGCTAGCAGCA+AGG + chr1_4:2182892-2182911 Msa0143290:CDS 45.0%
GATACAGGATGAGAATGAGC+AGG - chr1_4:2183092-2183111 None:intergenic 45.0%
CAAAAACCACTTGAATGCGC+TGG - chr1_4:2183132-2183151 None:intergenic 45.0%
! CAGCGCATTCAAGTGGTTTT+TGG + chr1_4:2183130-2183149 Msa0143290:intron 45.0%
GGTGGAACAAATTGCAACAG+TGG - chr1_4:2183259-2183278 None:intergenic 45.0%
CAAAAACCACTTGAATGCGC+TGG - chr1_4:2183132-2183151 None:intergenic 45.0%
! CAGCGCATTCAAGTGGTTTT+TGG + chr1_4:2183130-2183149 Msa0143290:intron 45.0%
GGTGGAACAAATTGCAACAG+TGG - chr1_4:2183259-2183278 None:intergenic 45.0%
! CAAGCCCAGAAACTTTTGCA+GGG - chr1_4:2183940-2183959 None:intergenic 45.0%
!! TTTCTTGCTTTTGCAGCAGC+AGG - chr1_4:2184040-2184059 None:intergenic 45.0%
! GTGATTTGATCTGGGCTAGA+GGG - chr1_4:2184075-2184094 None:intergenic 45.0%
! AGTGATTTGATCTGGGCTAG+AGG - chr1_4:2184076-2184095 None:intergenic 45.0%
CTGCGGAAGTGATTTGATCT+GGG - chr1_4:2184083-2184102 None:intergenic 45.0%
GAGTTTGACCTTGCATCAGT+GGG - chr1_4:2184118-2184137 None:intergenic 45.0%
TGAGTTTGACCTTGCATCAG+TGG - chr1_4:2184119-2184138 None:intergenic 45.0%
! CCCTCTTCTTTGATGATCTC+GGG - chr1_4:2184169-2184188 None:intergenic 45.0%
CCCGAGATCATCAAAGAAGA+GGG + chr1_4:2184166-2184185 Msa0143290:CDS 45.0%
!! AACGTGGTGTTGCAAAGTCT+TGG + chr1_4:2184292-2184311 Msa0143290:CDS 45.0%
GAAGCAAGGGATCTGATTAG+AGG + chr1_4:2184343-2184362 Msa0143290:CDS 45.0%
! TGTGAACCCAAACGGTTTTC+AGG - chr1_4:2184385-2184404 None:intergenic 45.0%
! AACCGTTTGGGTTCACAGAA+AGG + chr1_4:2184388-2184407 Msa0143290:CDS 45.0%
! ACCGTTTGGGTTCACAGAAA+GGG + chr1_4:2184389-2184408 Msa0143290:CDS 45.0%
CAGTTAAGGCCCTCAAAGAA+GGG - chr1_4:2184436-2184455 None:intergenic 45.0%
! CTTCTTTGAGGGCCTTAACT+GGG + chr1_4:2184435-2184454 Msa0143290:CDS 45.0%
TGGGATAGCGCAACGAATTA+AGG - chr1_4:2184461-2184480 None:intergenic 45.0%
! CAAAACTCTGGAAGTTCTGG+TGG - chr1_4:2184481-2184500 None:intergenic 45.0%
ATGTAATGTAGGACAGCACG+TGG + chr1_4:2184555-2184574 Msa0143290:CDS 45.0%
GTAAGGGAGGACCGAAGTAT+AGG + chr1_4:2181160-2181179 Msa0143290:CDS 50.0%
GAGGACCGAAGTATAGGGAA+AGG + chr1_4:2181166-2181185 Msa0143290:CDS 50.0%
TTTCCAACTTGTGGAGACCG+CGG - chr1_4:2181418-2181437 None:intergenic 50.0%
AATGTGAGGCCCAGAATGAC+TGG - chr1_4:2181599-2181618 None:intergenic 50.0%
!! GATGCAGGGGTTTGCTTTTC+TGG - chr1_4:2181871-2181890 None:intergenic 50.0%
AGTCCAAGGCCATTACCTCT+TGG - chr1_4:2182260-2182279 None:intergenic 50.0%
! TCCAGGACTAGTAGAGTCCA+AGG - chr1_4:2182274-2182293 None:intergenic 50.0%
CTGAAGTTCACTCCGTTTCC+AGG - chr1_4:2182291-2182310 None:intergenic 50.0%
AGGCAAAGCAGTTGCAAAGG+TGG + chr1_4:2182365-2182384 Msa0143290:CDS 50.0%
GTTGCTCTCATCACTGGTAC+TGG - chr1_4:2182478-2182497 None:intergenic 50.0%
CAGTAGGCCTCACATGTCAA+AGG + chr1_4:2182518-2182537 Msa0143290:CDS 50.0%
CGACATGCTCAAATGCAGCA+CGG + chr1_4:2182561-2182580 Msa0143290:CDS 50.0%
CACGAAGGAAGAAGATGCCT+AGG + chr1_4:2182715-2182734 Msa0143290:CDS 50.0%
!! GTCATGGAGTATTGTCCAGG+TGG + chr1_4:2182831-2182850 Msa0143290:CDS 50.0%
TTCAGAGCTAGCAGCAAGGT+AGG + chr1_4:2182896-2182915 Msa0143290:intron 50.0%
GAAGTGCAGCCAATAGCAGA+GGG - chr1_4:2183612-2183631 None:intergenic 50.0%
! AGAAGTGCAGCCAATAGCAG+AGG - chr1_4:2183613-2183632 None:intergenic 50.0%
TGTGCAAGTACTCCAGAGCA+AGG - chr1_4:2183778-2183797 None:intergenic 50.0%
! CTGGAGTACTTGCACATGCT+TGG + chr1_4:2183782-2183801 Msa0143290:CDS 50.0%
! CCAAGCCCAGAAACTTTTGC+AGG - chr1_4:2183941-2183960 None:intergenic 50.0%
! CCTGCAAAAGTTTCTGGGCT+TGG + chr1_4:2183938-2183957 Msa0143290:CDS 50.0%
!! TTGCTTTTGCAGCAGCAGGT+AGG - chr1_4:2184036-2184055 None:intergenic 50.0%
GCTGCGGAAGTGATTTGATC+TGG - chr1_4:2184084-2184103 None:intergenic 50.0%
CAAATCACTTCCGCAGCTTG+TGG + chr1_4:2184087-2184106 Msa0143290:CDS 50.0%
GCCCGAGATCATCAAAGAAG+AGG + chr1_4:2184165-2184184 Msa0143290:CDS 50.0%
! GCAGTTGACTGGTGGACATT+TGG + chr1_4:2184199-2184218 Msa0143290:CDS 50.0%
CCCCTTTCTGTGAACCCAAA+CGG - chr1_4:2184393-2184412 None:intergenic 50.0%
! CCGTTTGGGTTCACAGAAAG+GGG + chr1_4:2184390-2184409 Msa0143290:CDS 50.0%
CCAGTTAAGGCCCTCAAAGA+AGG - chr1_4:2184437-2184456 None:intergenic 50.0%
! CCTTCTTTGAGGGCCTTAAC+TGG + chr1_4:2184434-2184453 Msa0143290:CDS 50.0%
AGACATGGCATCACAAGGCA+AGG + chr1_4:2184516-2184535 Msa0143290:CDS 50.0%
GACATGGCATCACAAGGCAA+GGG + chr1_4:2184517-2184536 Msa0143290:CDS 50.0%
GGAGCCACAAATGTGGGAAT+CGG - chr1_4:2184634-2184653 None:intergenic 50.0%
TGGCTCCCTGCTCCATATAT+TGG + chr1_4:2184647-2184666 Msa0143290:three_prime_UTR 50.0%
! AAGCCTTTGGCGCCGAACTT+GGG + chr1_4:2181247-2181266 Msa0143290:CDS 55.0%
TATCCCAAGTTCGGCGCCAA+AGG - chr1_4:2181253-2181272 None:intergenic 55.0%
CGCGGAACACCCATTGTCAT+CGG - chr1_4:2181400-2181419 None:intergenic 55.0%
CGATGACAATGGGTGTTCCG+CGG + chr1_4:2181398-2181417 Msa0143290:CDS 55.0%
ACTTCGCGACGATGAAGTCC+CGG - chr1_4:2181788-2181807 None:intergenic 55.0%
TGGGTCTCAATCACAGCGTG+TGG + chr1_4:2181834-2181853 Msa0143290:CDS 55.0%
! ATTGTGCGAGGGGTATGGTG+TGG - chr1_4:2182066-2182085 None:intergenic 55.0%
GCCTTGGACTCTACTAGTCC+TGG + chr1_4:2182270-2182289 Msa0143290:CDS 55.0%
GTTCTACGGCAGAAGCAGCT+TGG + chr1_4:2182864-2182883 Msa0143290:CDS 55.0%
TGCTGAAGTCCTCCTTGCTC+TGG + chr1_4:2183763-2183782 Msa0143290:CDS 55.0%
GCAAGTACTCCAGAGCAAGG+AGG - chr1_4:2183775-2183794 None:intergenic 55.0%
GCAGCAGCAGGTAGGAATCT+GGG - chr1_4:2184028-2184047 None:intergenic 55.0%
TGCAGCAGCAGGTAGGAATC+TGG - chr1_4:2184029-2184048 None:intergenic 55.0%
!! GACATGGTGCTGCAGTTGAC+TGG + chr1_4:2184188-2184207 Msa0143290:CDS 55.0%
!! ATGGTGCTGCAGTTGACTGG+TGG + chr1_4:2184191-2184210 Msa0143290:CDS 55.0%
GAGCAGGGAGCCACAAATGT+GGG - chr1_4:2184640-2184659 None:intergenic 55.0%
! GGTTGTCTTGGTGGTTGGGG+CGG + chr1_4:2180481-2180500 Msa0143290:intron 60.0%
! GTTGTCTTGGTGGTTGGGGC+GGG + chr1_4:2180482-2180501 Msa0143290:intron 60.0%
! TTGTCTTGGTGGTTGGGGCG+GGG + chr1_4:2180483-2180502 Msa0143290:intron 60.0%
TGGTTGGGGCGGGGAAGTTA+AGG + chr1_4:2180492-2180511 Msa0143290:intron 60.0%
! GAAGCCTTTGGCGCCGAACT+TGG + chr1_4:2181246-2181265 Msa0143290:CDS 60.0%
! GGCGCCGAACTTGGGATACA+AGG + chr1_4:2181255-2181274 Msa0143290:CDS 60.0%
GTTCCGCGGTCTCCACAAGT+TGG + chr1_4:2181412-2181431 Msa0143290:CDS 60.0%
TGTTCCTGGCACAGCTCAGC+TGG + chr1_4:2182185-2182204 Msa0143290:CDS 60.0%
CAAACCAGCTGAGCTGTGCC+AGG - chr1_4:2182192-2182211 None:intergenic 60.0%
! GTGGCTCAAGTTGCGGCAGT+AGG + chr1_4:2182502-2182521 Msa0143290:CDS 60.0%
TGGCTGAGCCCACTGATGCA+AGG + chr1_4:2184107-2184126 Msa0143290:CDS 60.0%
GGAGCAGGGAGCCACAAATG+TGG - chr1_4:2184641-2184660 None:intergenic 60.0%
GGGGCGGGGAAGTTAAGGAG+TGG + chr1_4:2180497-2180516 Msa0143290:intron 65.0%
GTGGGCTCAGCCACAAGCTG+CGG - chr1_4:2184100-2184119 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 2179940 2184755 2179940 ID=Msa0143290;Name=Msa0143290
chr1_4 mRNA 2179940 2184755 2179940 ID=Msa0143290-mRNA-1;Parent=Msa0143290;Name=Msa0143290-mRNA-1;_AED=0.01;_eAED=0.01;_QI=364|1|1|1|0.5|0.33|3|161|876
chr1_4 exon 2179940 2180073 2179940 ID=Msa0143290-mRNA-1:exon:811;Parent=Msa0143290-mRNA-1
chr1_4 exon 2180894 2182913 2180894 ID=Msa0143290-mRNA-1:exon:812;Parent=Msa0143290-mRNA-1
chr1_4 exon 2183754 2184755 2183754 ID=Msa0143290-mRNA-1:exon:813;Parent=Msa0143290-mRNA-1
chr1_4 five_prime_UTR 2179940 2180073 2179940 ID=Msa0143290-mRNA-1:five_prime_utr;Parent=Msa0143290-mRNA-1
chr1_4 five_prime_UTR 2180894 2181123 2180894 ID=Msa0143290-mRNA-1:five_prime_utr;Parent=Msa0143290-mRNA-1
chr1_4 CDS 2181124 2182913 2181124 ID=Msa0143290-mRNA-1:cds;Parent=Msa0143290-mRNA-1
chr1_4 CDS 2183754 2184594 2183754 ID=Msa0143290-mRNA-1:cds;Parent=Msa0143290-mRNA-1
chr1_4 three_prime_UTR 2184595 2184755 2184595 ID=Msa0143290-mRNA-1:three_prime_utr;Parent=Msa0143290-mRNA-1
Gene Sequence

>Msa0143290

ATGGGTTCATTATCTGGCACTTGTGAAATAGTTGAAGTAAGGGAGGACCGAAGTATAGGGAAAGGCGCTATACAGATTTGCCAGTCCAAGTCTCAGAAAAAAATGTCTGAGAAAAAAAATAAGAAGCCTTTGGCGCCGAACTTGGGATACAAGGATAAAATCGATGATGAAATTAACAAGCTGTTTCAATCAATTGCTCGTAAATCTTCGTCAAGGGATTTGGGCATTTCACAAGATGGTACAAGTCATAAGCTGAAAAACACCTTAAAAAAGCCGATGACAATGGGTGTTCCGCGGTCTCCACAAGTTGGAAATTCTGAGGCTGTTAATTTGAAGCAGGCACTAAGAGACCTTTGTATATCTAAGGCATCAGAAGTGGCTTCCATGAAACGGCTATCGAAGTCAATAGCTTCTCCAAGAATATCAGAGGTTGGGAGGATACAGACATTGTACAGTACGGTGGTAGATGAAGCCAGTCATTCTGGGCCTCACATTGCTGAGAGTAAAGGGCGAAGAATGGAAATATCTCTAGTGTCAGAAAAAAGCCAGTCACTCTCATTCAATAAAACATCTCAATCTCATCAAACTACCCAAATCACATCATCGAGTCAAGCCATTAATTCTGCTTGGGAAATTGCTGTTGCAACTAATCAACTTCATTCCGGGACTTCATCGTCGCGAAGTGATGCAGCATGTTCATCAAGTAGAGTTGGGTCTCAATCACAGCGTGTGGTACCTGTTCAACCAGAAAAGCAAACCCCTGCATCTTCTCCATCTCTTTCTAATACAGCTGAAAGCAAATTAGAGTTGTCTGTAAATGCTTCTTCACCTAAAAAGTTAGGTAATAAAGTGGCTGTGTCAAATTCTGGACGGAAAGGTAGGTTGCAGACAGCATCTTCTTCATCTACTTCTGTTAATGGCAGCAGGGTTAACAAACAACCACACCATACCCCTCGCACAATTAAAATGGTCATCAAGAACAAAAATCCGAGTAAGAAGAAAGTGAAGGAGGATTCAGTTTCTGCATCATGTGATCCTACATCAAATGAAGTTAGCAAGTCTGTTCCTGGCACAGCTCAGCTGGTTTGTGAAAGATGTAGGTGCGCTTTAGAAGATACAAAGGAAGAAAAAAACCAAGAGGTAATGGCCTTGGACTCTACTAGTCCTGGAAACGGAGTGAACTTCAGTAACGTGCACTCTAGTTCATATAAACCTTATTCGGCATCAAATAGTGGTAATATAGGCAAAGCAGTTGCAAAGGTGGAGAAGATTCAGAAGAACACCAAGTTGAAAGAGCAACTCGAGTTCTCACAAAGCTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACCAGTACCAGTGATGAGAGCAACATGAGTGGCTCAAGTTGCGGCAGTAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATTCGACATGCTCAAATGCAGCACGGAGTTTTGGGTTTGAGACATTTCAATCTTTTGAAGAAACTTGGTTGCGGAGACATTGGGACTGTATATCTTGCCGAACTAATTGGCACAAGTTGTTTGTTTGCTATTAAGGTCATGGACATCGAATTTTTGGCACGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATCTTAAGGATGCTGGACCATCCGTTTCTTCCTACATTGTATGTGCAATTTACATCAGATAATCTTTCATGTTTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATGTTTTTCAGAGCTAGCAGCAAGGTTTTATGTTGCTGAAGTCCTCCTTGCTCTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCTGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACTGATTTTGATCTGTCGTTGAGGTGTGCTGTTAGCCCAACACTTCTGAAATCATCTTCTAATATTGACCCTGCAAAAGTTTCTGGGCTTGGTGCACAATCAAGTTGCATTGAGCCATTGTGCATTCAACCAACTTGTCAAGTTTCATGCTTCAGTCCCAGATTCCTACCTGCTGCTGCAAAAGCAAGAAAATTAAAAGTCGACCCTCTAGCCCAGATCAAATCACTTCCGCAGCTTGTGGCTGAGCCCACTGATGCAAGGTCAAACTCATTTGTTGGTACACATGAATACTTAGCGCCCGAGATCATCAAAGAAGAGGGACATGGTGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGAAGAACACCCTTTAAAGGTTCTAACAACGAAGAAACATTAGCAAACGTGGTGTTGCAAAGTCTTGGATTCCCTGATGACCCATTTGTCAGTTTCGAAGCAAGGGATCTGATTAGAGGGTTGTTAGTTAAAGAACCTGAAAACCGTTTGGGTTCACAGAAAGGGGCTGCCGAGATTAAACAACATCCCTTCTTTGAGGGCCTTAACTGGGCCTTAATTCGTTGCGCTATCCCACCAGAACTTCCAGAGTTTTGTGATTTTGGAGTTTTAGACATGGCATCACAAGGCAAGGGTGCAAAGTATTTAGAATGTAATGTAGGACAGCACGTGGAATTCGAGTTGTTTTAA
Protein sequence

>Msa0143290

MGSLSGTCEIVEVREDRSIGKGAIQICQSKSQKKMSEKKNKKPLAPNLGYKDKIDDEINKLFQSIARKSSSRDLGISQDGTSHKLKNTLKKPMTMGVPRSPQVGNSEAVNLKQALRDLCISKASEVASMKRLSKSIASPRISEVGRIQTLYSTVVDEASHSGPHIAESKGRRMEISLVSEKSQSLSFNKTSQSHQTTQITSSSQAINSAWEIAVATNQLHSGTSSSRSDAACSSSRVGSQSQRVVPVQPEKQTPASSPSLSNTAESKLELSVNASSPKKLGNKVAVSNSGRKGRLQTASSSSTSVNGSRVNKQPHHTPRTIKMVIKNKNPSKKKVKEDSVSASCDPTSNEVSKSVPGTAQLVCERCRCALEDTKEEKNQEVMALDSTSPGNGVNFSNVHSSSYKPYSASNSGNIGKAVAKVEKIQKNTKLKEQLEFSQSSKSSQGEYSSSTSTSDESNMSGSSCGSRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDIEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFSELAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSSNIDPAKVSGLGAQSSCIEPLCIQPTCQVSCFSPRFLPAAAKARKLKVDPLAQIKSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLGFPDDPFVSFEARDLIRGLLVKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPEFCDFGVLDMASQGKGAKYLECNVGQHVEFELF*