Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0174370 | XP_003591407.1 | 98.335 | 781 | 5 | 1 | 1 | 781 | 1 | 773 | 0.0 | 1571 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0174370 | sp|Q0WQ75|VPS51_ARATH | 65.190 | 790 | 241 | 10 | 9 | 781 | 8 | 780 | 0.0 | 1024 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0174370 | G7IDQ8 | 98.335 | 781 | 5 | 1 | 1 | 781 | 1 | 773 | 0.0 | 1571 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0174370 | Msa0757800 | 0.802523 | 5.387147e-49 | -8.615850e-47 |
Msa0174370 | Msa1365760 | 0.819090 | 1.393683e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0174370 | MtrunA17_Chr1g0194711 | 97.567 | 781 | 4 | 2 | 1 | 781 | 1 | 766 | 0.0 | 1552 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0174370 | AT4G02030.1 | 65.190 | 790 | 241 | 10 | 9 | 781 | 8 | 780 | 0.0 | 1024 |
Msa0174370 | AT4G02030.2 | 63.190 | 815 | 241 | 11 | 9 | 781 | 8 | 805 | 0.0 | 1008 |
Find 165 sgRNAs with CRISPR-Local
Find 661 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCAACTATTTCCCTTATA+GGG | 0.151677 | 1_4:+60025020 | None:intergenic |
TCTTCAACTATTTCCCTTAT+AGG | 0.173079 | 1_4:+60025019 | None:intergenic |
CATCTTCTGCAAGACATTTC+AGG | 0.175998 | 1_4:-60027329 | Msa0174370:intron |
GAAGGTTTATAAATCGAATT+TGG | 0.209971 | 1_4:-60033652 | Msa0174370:intron |
ATCCACTTCGATTAAAAGTT+TGG | 0.231217 | 1_4:+60025080 | None:intergenic |
TCATCGAGAGAAGCGTATTT+AGG | 0.234180 | 1_4:+60033803 | None:intergenic |
TGACTAATCATTACATATTC+AGG | 0.239821 | 1_4:+60024416 | None:intergenic |
AAGGGCAAGGAGCCAGCTTC+TGG | 0.249954 | 1_4:-60025335 | Msa0174370:CDS |
TTTCTTACAAGTCCTGAAAA+AGG | 0.250474 | 1_4:-60027003 | Msa0174370:CDS |
AAGAGAGTTATTTGTTGATT+TGG | 0.273495 | 1_4:-60026707 | Msa0174370:CDS |
TGCTCTTCTAGTGATATTTC+CGG | 0.275316 | 1_4:-60028686 | Msa0174370:CDS |
AATTATTTCTTCCTGAAAAT+AGG | 0.291970 | 1_4:+60026635 | None:intergenic |
TATGGAAACTGGATAGTTTC+AGG | 0.303218 | 1_4:-60024458 | Msa0174370:three_prime_UTR |
TGAAGAATTTGAAGCTAAAC+TGG | 0.308207 | 1_4:+60033999 | None:intergenic |
CAACACAACAGAGTTCAAAA+TGG | 0.315642 | 1_4:-60033936 | Msa0174370:exon |
GATCAAATTTGCTCAAGATT+TGG | 0.317279 | 1_4:-60028647 | Msa0174370:CDS |
TCCATTGGAGCCTCCTATAC+TGG | 0.319337 | 1_4:-60024769 | Msa0174370:CDS |
GGCAGCAACTCATGAATTTA+TGG | 0.320539 | 1_4:-60028719 | Msa0174370:CDS |
AGTTCCTAAGGACCCCTATA+AGG | 0.323442 | 1_4:-60025033 | Msa0174370:CDS |
ATCTAGACCTGCATTTGTTC+CGG | 0.333083 | 1_4:-60026326 | Msa0174370:CDS |
CATCGAGAGAAGCGTATTTA+GGG | 0.343440 | 1_4:+60033804 | None:intergenic |
TGGAATCAAGAACAGCTTCT+AGG | 0.343664 | 1_4:+60026961 | None:intergenic |
GACTAACATAATGCACAATC+AGG | 0.354535 | 1_4:+60024356 | None:intergenic |
AGAGGTTTACAACACCGAAT+TGG | 0.358846 | 1_4:-60025838 | Msa0174370:CDS |
AGGATGAAAAGTAACATTTC+AGG | 0.360428 | 1_4:-60033310 | Msa0174370:CDS |
ATGCACTTGCCAAGTCTATC+AGG | 0.360884 | 1_4:+60032741 | None:intergenic |
TAATCTTCTTCGCAAAGTTC+AGG | 0.361843 | 1_4:-60033016 | Msa0174370:intron |
TGAACCATTGTTTATTTCCT+CGG | 0.362479 | 1_4:+60029544 | None:intergenic |
TGATATTTACAGGAGTTGTC+TGG | 0.363716 | 1_4:-60027566 | Msa0174370:intron |
ACTTCTTGCTTGATGAGGTT+GGG | 0.365195 | 1_4:-60024982 | Msa0174370:CDS |
TCCTGGCCTTGTCCTAGTGC+TGG | 0.365219 | 1_4:-60026557 | Msa0174370:CDS |
ATCAAGAAGCAATCCCTTGC+GGG | 0.367586 | 1_4:-60025386 | Msa0174370:CDS |
ACAATCCATTACAGACATTC+AGG | 0.368263 | 1_4:-60029573 | Msa0174370:CDS |
TTGGAGGAATTGGAAGGGTC+TGG | 0.376148 | 1_4:+60033842 | None:intergenic |
TTCAGGGATGGAGACTAATA+TGG | 0.378226 | 1_4:-60033293 | Msa0174370:CDS |
GGATATCCAGTTGAATTTGT+TGG | 0.381501 | 1_4:+60025056 | None:intergenic |
GTGTTGTAAACCTCTTCTTC+AGG | 0.383008 | 1_4:+60025846 | None:intergenic |
AGAACACCGAGTAAATCTTC+TGG | 0.386716 | 1_4:+60028484 | None:intergenic |
CGATCAATACATGAACATTC+TGG | 0.387356 | 1_4:-60033756 | Msa0174370:intron |
GATCGCAGAGTTGGAGGAAT+TGG | 0.389281 | 1_4:+60033832 | None:intergenic |
TCCTCTTTCTATCAGGCATA+TGG | 0.393277 | 1_4:-60032559 | Msa0174370:intron |
ATAGGAGGCTCCAATGGAAT+TGG | 0.395022 | 1_4:+60024774 | None:intergenic |
CCTAGTGCTGGCACAATTGT+CGG | 0.395692 | 1_4:-60026545 | Msa0174370:CDS |
CTAGATGTGTTTCCAGAAGC+TGG | 0.396388 | 1_4:+60025323 | None:intergenic |
GAGAAATCTGTAGAAAATTC+CGG | 0.399984 | 1_4:-60026303 | Msa0174370:CDS |
TCTAGACCTGCATTTGTTCC+GGG | 0.403764 | 1_4:-60026325 | Msa0174370:CDS |
TCAGGATAAGTGAAATCCTC+TGG | 0.410654 | 1_4:+60025864 | None:intergenic |
GAGGTTTACAACACCGAATT+GGG | 0.410869 | 1_4:-60025837 | Msa0174370:CDS |
TACATCAGATGAAGTACAAT+TGG | 0.411378 | 1_4:-60033912 | Msa0174370:CDS |
CCGGAAAATCCAACTGCTTA+AGG | 0.413095 | 1_4:+60030302 | None:intergenic |
ACACTTCTCTATTTGACAAA+AGG | 0.414313 | 1_4:-60033068 | Msa0174370:CDS |
TTTCCCTTATAGGGGTCCTT+AGG | 0.415796 | 1_4:+60025029 | None:intergenic |
GACTTCTTGCTTGATGAGGT+TGG | 0.416635 | 1_4:-60024983 | Msa0174370:CDS |
TGGTTAGAGAGAGCTGCTTC+TGG | 0.419415 | 1_4:+60027513 | None:intergenic |
TCGTAGAATTAGTGATGGTT+TGG | 0.419478 | 1_4:-60024577 | Msa0174370:three_prime_UTR |
TACAACACCGAATTGGGTTA+AGG | 0.424939 | 1_4:-60025831 | Msa0174370:intron |
TCCCTTGCGGGAGGAGAAGT+TGG | 0.427620 | 1_4:-60025374 | Msa0174370:CDS |
AGCTATTCAAGTACATGGTT+TGG | 0.427838 | 1_4:-60026608 | Msa0174370:CDS |
GAACCATTGTTTATTTCCTC+GGG | 0.432864 | 1_4:+60029545 | None:intergenic |
CTGGTAAGACTTCATCTATC+AGG | 0.435374 | 1_4:+60027532 | None:intergenic |
TGGATTCCAACAAATTCAAC+TGG | 0.439659 | 1_4:-60025062 | Msa0174370:CDS |
GAGGAAATAAACAATGGTTC+AGG | 0.440575 | 1_4:-60029542 | Msa0174370:CDS |
TTATAGGGGTCCTTAGGAAC+TGG | 0.440883 | 1_4:+60025035 | None:intergenic |
TCCTCAGCTATTCAAGTACA+TGG | 0.446202 | 1_4:-60026613 | Msa0174370:CDS |
CAAACTTGTACAAGCAAAGT+TGG | 0.456417 | 1_4:-60024745 | Msa0174370:CDS |
GTTCCTAAGGACCCCTATAA+GGG | 0.461615 | 1_4:-60025032 | Msa0174370:CDS |
CAGAATGTTCATGTATTGAT+CGG | 0.469227 | 1_4:+60033757 | None:intergenic |
GGAATCAAGAACAGCTTCTA+GGG | 0.470050 | 1_4:+60026962 | None:intergenic |
AGGCTGACCTTAACCCAATT+CGG | 0.471401 | 1_4:+60025824 | None:intergenic |
AGGAGGCATGAACGTCTTGC+TGG | 0.471550 | 1_4:-60026919 | Msa0174370:intron |
TTGGCAATTGATTGTTAACT+TGG | 0.476905 | 1_4:-60024558 | Msa0174370:three_prime_UTR |
TGCTGTGCTCCTTAAGCAGT+TGG | 0.478591 | 1_4:-60030311 | Msa0174370:CDS |
CCGACAATTGTGCCAGCACT+AGG | 0.481310 | 1_4:+60026545 | None:intergenic |
CAAGTACATGGTTTGGCAGA+AGG | 0.482157 | 1_4:-60026601 | Msa0174370:CDS |
TTTGTTGATTTGGTTCAAGA+AGG | 0.483059 | 1_4:-60026697 | Msa0174370:CDS |
CCCTTGCGGGAGGAGAAGTT+GGG | 0.483687 | 1_4:-60025373 | Msa0174370:CDS |
ACTTCAACGACATGTTGAAA+TGG | 0.484246 | 1_4:-60033622 | Msa0174370:CDS |
AGGGTCTGGAGAGTAGAAAC+TGG | 0.485286 | 1_4:+60033856 | None:intergenic |
TGTATTTATATCAGCAGGTC+GGG | 0.488709 | 1_4:+60024660 | None:intergenic |
TGTACAAGTTTGTCCAGTAT+AGG | 0.489895 | 1_4:+60024756 | None:intergenic |
AGGCGTATGCAGACGCAGTC+AGG | 0.490139 | 1_4:-60032710 | Msa0174370:CDS |
AAACGTGTATTTATATCAGC+AGG | 0.492562 | 1_4:+60024655 | None:intergenic |
TCTAACACTACCACCAGAAA+AGG | 0.496688 | 1_4:+60026357 | None:intergenic |
GAACACCGAGTAAATCTTCT+GGG | 0.497513 | 1_4:+60028485 | None:intergenic |
AATGAATAACCTCAAGAGAA+TGG | 0.498087 | 1_4:+60027493 | None:intergenic |
AACACAACAGAGTTCAAAAT+GGG | 0.498706 | 1_4:-60033935 | Msa0174370:exon |
ATGGAAACTGGATAGTTTCA+GGG | 0.502033 | 1_4:-60024457 | Msa0174370:three_prime_UTR |
TGTAGAAAATTCCGGTCAGC+TGG | 0.506209 | 1_4:-60026295 | Msa0174370:CDS |
GGATGAAAAGTAACATTTCA+GGG | 0.506373 | 1_4:-60033309 | Msa0174370:CDS |
GACTAATCATTACATATTCA+GGG | 0.507346 | 1_4:+60024417 | None:intergenic |
CACTTCTCTATTTGACAAAA+GGG | 0.511687 | 1_4:-60033067 | Msa0174370:CDS |
AGAATGTTCATGTATTGATC+GGG | 0.516406 | 1_4:+60033758 | None:intergenic |
AGCAAAGTTGGCTAAAACCA+AGG | 0.519616 | 1_4:-60024733 | Msa0174370:CDS |
TTCAACTATTTCCCTTATAG+GGG | 0.520741 | 1_4:+60025021 | None:intergenic |
ATATGGAGATTCATCATTCA+AGG | 0.525968 | 1_4:-60032542 | Msa0174370:CDS |
ACAAACATGTGCACTTCTCT+CGG | 0.527354 | 1_4:+60025714 | None:intergenic |
GCTCACCTGAATGTCTGTAA+TGG | 0.528279 | 1_4:+60029568 | None:intergenic |
ATTTCTCCCGGAACAAATGC+AGG | 0.529783 | 1_4:+60026319 | None:intergenic |
AGGGGAAGTGATCGCAGAGT+TGG | 0.530506 | 1_4:+60033823 | None:intergenic |
GGAAGTGATCGCAGAGTTGG+AGG | 0.530551 | 1_4:+60033826 | None:intergenic |
GTTTATAAATCGAATTTGGA+AGG | 0.532058 | 1_4:-60033648 | Msa0174370:CDS |
GATATTTACAGGAGTTGTCT+GGG | 0.534454 | 1_4:-60027565 | Msa0174370:intron |
GATATATGTTACAAGTTACA+AGG | 0.537032 | 1_4:+60024510 | None:intergenic |
GAGAAGATGCTGAAGGAGAA+AGG | 0.538349 | 1_4:+60029516 | None:intergenic |
GTGTCTTGATCCAATTCCAT+TGG | 0.539009 | 1_4:-60024784 | Msa0174370:CDS |
AACTGGATATCCAGTTCCTA+AGG | 0.540797 | 1_4:-60025045 | Msa0174370:CDS |
GGGTAGGTCAAATACTCAAA+GGG | 0.544064 | 1_4:-60025353 | Msa0174370:CDS |
ACCCAACTTCTCCTCCCGCA+AGG | 0.545104 | 1_4:+60025372 | None:intergenic |
GCCAGCACTAGGACAAGGCC+AGG | 0.546060 | 1_4:+60026556 | None:intergenic |
TTCGATTAAAAGTTTGGAGA+CGG | 0.551357 | 1_4:+60025086 | None:intergenic |
GAAAAGTAACATTTCAGGGA+TGG | 0.551848 | 1_4:-60033305 | Msa0174370:CDS |
TATTTCTTCCTGAAAATAGG+AGG | 0.552504 | 1_4:+60026638 | None:intergenic |
CTTGAAAGCATACCAGGTGC+AGG | 0.556507 | 1_4:+60026263 | None:intergenic |
GAGTTATTGTGAACATTGAG+AGG | 0.561223 | 1_4:+60024308 | None:intergenic |
TCCAGTATAGGAGGCTCCAA+TGG | 0.562674 | 1_4:+60024768 | None:intergenic |
AAGGTATACGTAAGCACCGC+AGG | 0.565472 | 1_4:-60025435 | Msa0174370:CDS |
TGGGTAGGTCAAATACTCAA+AGG | 0.566001 | 1_4:-60025354 | Msa0174370:CDS |
TCTCTCTAACCATTCTCTTG+AGG | 0.566962 | 1_4:-60027502 | Msa0174370:intron |
TTTCACTTATCCTGAAGAAG+AGG | 0.570507 | 1_4:-60025856 | Msa0174370:CDS |
TCCTTCAGCATCTTCTCACA+AGG | 0.574342 | 1_4:-60029510 | Msa0174370:intron |
ATCTTTCGTAGAATTAGTGA+TGG | 0.575664 | 1_4:-60024582 | Msa0174370:three_prime_UTR |
ACAAGTTTGTCCAGTATAGG+AGG | 0.576530 | 1_4:+60024759 | None:intergenic |
TATGATCTTCCTGATAGACT+TGG | 0.583092 | 1_4:-60032750 | Msa0174370:CDS |
CAATAAGTTCATCAGCGCTA+CGG | 0.585400 | 1_4:-60033544 | Msa0174370:CDS |
CAGGATAAGTGAAATCCTCT+GGG | 0.586086 | 1_4:+60025865 | None:intergenic |
GGTTGACTTCTTGCTTGATG+AGG | 0.587881 | 1_4:-60024987 | Msa0174370:CDS |
GCAGAGTTGGAGGAATTGGA+AGG | 0.588452 | 1_4:+60033836 | None:intergenic |
CCCAACTTCTCCTCCCGCAA+GGG | 0.588561 | 1_4:+60025373 | None:intergenic |
GTGTATTTATATCAGCAGGT+CGG | 0.606462 | 1_4:+60024659 | None:intergenic |
CATCAAGAAGCAATCCCTTG+CGG | 0.609700 | 1_4:-60025387 | Msa0174370:CDS |
ACCATGTACTTGAATAGCTG+AGG | 0.613701 | 1_4:+60026612 | None:intergenic |
AGATAATGTCTGTTCAGTCA+AGG | 0.615990 | 1_4:-60033104 | Msa0174370:CDS |
GCGCTACGGATACTATAAAG+AGG | 0.616730 | 1_4:-60033530 | Msa0174370:intron |
TGGGAGAAACAGTGTTGCTG+TGG | 0.618738 | 1_4:-60024963 | Msa0174370:intron |
ACTAACATAATGCACAATCA+GGG | 0.618843 | 1_4:+60024357 | None:intergenic |
TGGCAAGTGCATCAAGTCAG+AGG | 0.622529 | 1_4:-60032730 | Msa0174370:CDS |
TATGGAACAGCTTCTCGACA+AGG | 0.628435 | 1_4:-60033275 | Msa0174370:intron |
TTTATATCAGCAGGTCGGGA+AGG | 0.628685 | 1_4:+60024664 | None:intergenic |
GGTCAAATACTCAAAGGGCA+AGG | 0.632029 | 1_4:-60025348 | Msa0174370:CDS |
CAGAGTTGGAGGAATTGGAA+GGG | 0.634974 | 1_4:+60033837 | None:intergenic |
TTCCGTTACTATCAGTCCTG+CGG | 0.636795 | 1_4:+60025419 | None:intergenic |
CGGAGGAGTACGTGAAGACA+CGG | 0.637187 | 1_4:-60028513 | Msa0174370:CDS |
AACCATTGTTTATTTCCTCG+GGG | 0.639761 | 1_4:+60029546 | None:intergenic |
AGTACAAAAGCAGTTCTGCA+AGG | 0.651701 | 1_4:-60026939 | Msa0174370:CDS |
TGGAAACTGGATAGTTTCAG+GGG | 0.653535 | 1_4:-60024456 | Msa0174370:three_prime_UTR |
AAAGATGACGAATACAACAA+AGG | 0.655081 | 1_4:+60024599 | None:intergenic |
ATTCACCCAGAAGATTTACT+CGG | 0.660202 | 1_4:-60028490 | Msa0174370:CDS |
AGCAACTCATGAATTTATGG+AGG | 0.667015 | 1_4:-60028716 | Msa0174370:CDS |
AAGAAGCAATCCCTTGCGGG+AGG | 0.667453 | 1_4:-60025383 | Msa0174370:CDS |
GAAATATCACTAGAAGAGCA+CGG | 0.674119 | 1_4:+60028689 | None:intergenic |
CACCGCAGGACTGATAGTAA+CGG | 0.677495 | 1_4:-60025421 | Msa0174370:CDS |
ATCAATACAAGTGAGAGCAG+AGG | 0.680679 | 1_4:-60030335 | Msa0174370:CDS |
AGCCCCGAGGAAATAAACAA+TGG | 0.694626 | 1_4:-60029548 | Msa0174370:CDS |
AATAGTTGAAGATGAAGCTG+CGG | 0.696631 | 1_4:-60025008 | Msa0174370:CDS |
TGCGGGAGGAGAAGTTGGGT+AGG | 0.698188 | 1_4:-60025369 | Msa0174370:CDS |
TTGATCGGGATCGAATTCAG+AGG | 0.698708 | 1_4:+60033772 | None:intergenic |
AGCATATTGAGAAACTGCAT+AGG | 0.699757 | 1_4:-60033044 | Msa0174370:CDS |
ATCGAGAGAAGCGTATTTAG+GGG | 0.703352 | 1_4:+60033805 | None:intergenic |
ATTGTGCCAGCACTAGGACA+AGG | 0.706373 | 1_4:+60026551 | None:intergenic |
ACAAAAGCAGTTCTGCAAGG+AGG | 0.709324 | 1_4:-60026936 | Msa0174370:CDS |
CGGTGCTTACGTATACCTTG+AGG | 0.713106 | 1_4:+60025439 | None:intergenic |
ACCTTGTGAGAAGATGCTGA+AGG | 0.717212 | 1_4:+60029509 | None:intergenic |
AGACATTCAGGTGAGCCCCG+AGG | 0.746995 | 1_4:-60029561 | Msa0174370:CDS |
TGATTGTCGCTACTGCAGAG+CGG | 0.754543 | 1_4:-60024806 | Msa0174370:CDS |
ACATAAATATGAGAACCCAG+AGG | 0.800648 | 1_4:-60025880 | Msa0174370:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+TGG | - | chr1_4:60026303-60026322 | Msa0174370:CDS | 0.0% |
!! | ATATATATATATATATATAT+GGG | - | chr1_4:60026302-60026321 | Msa0174370:CDS | 0.0% |
!! | TATATATATATATATATATA+GGG | + | chr1_4:60026303-60026322 | None:intergenic | 0.0% |
!! | ATATATATATATATATATAT+AGG | + | chr1_4:60026302-60026321 | None:intergenic | 0.0% |
!! | TAATTAATTGATTATTATGA+AGG | - | chr1_4:60024746-60024765 | Msa0174370:CDS | 10.0% |
!! | ATTACATTTCAAATAATTAT+CGG | - | chr1_4:60024973-60024992 | Msa0174370:CDS | 10.0% |
!!! | TACTGTTTTTTATTTATTTA+TGG | - | chr1_4:60028141-60028160 | Msa0174370:intron | 10.0% |
!!! | ATCTTTCAAATTTTTTAAAA+GGG | + | chr1_4:60028622-60028641 | None:intergenic | 10.0% |
!!! | AATCTTTCAAATTTTTTAAA+AGG | + | chr1_4:60028623-60028642 | None:intergenic | 10.0% |
!!! | AAAATATATTTTCTAACAAT+AGG | + | chr1_4:60031002-60031021 | None:intergenic | 10.0% |
!!! | TATTTGATTTTTATATTCTT+TGG | - | chr1_4:60033580-60033599 | Msa0174370:CDS | 10.0% |
!!! | ATTTGATTTTTATATTCTTT+GGG | - | chr1_4:60033581-60033600 | Msa0174370:CDS | 10.0% |
!! | AAAATAAGTGAAATGAAAAA+AGG | - | chr1_4:60025243-60025262 | Msa0174370:intron | 15.0% |
!!! | AACCATTAATTTTAATTCTA+GGG | + | chr1_4:60026699-60026718 | None:intergenic | 15.0% |
!! | ATTATAGATATTATGAAAGA+CGG | + | chr1_4:60026875-60026894 | None:intergenic | 15.0% |
!!! | AATAGTTAGTTTATTATCAT+TGG | - | chr1_4:60028000-60028019 | Msa0174370:intron | 15.0% |
!! | ATGGGAATATTTATAATTAT+AGG | - | chr1_4:60029527-60029546 | Msa0174370:CDS | 15.0% |
!! | AAAATATTAACTAAAGTCTT+AGG | + | chr1_4:60030182-60030201 | None:intergenic | 15.0% |
!! | AATCTAAATCAATTTCTTAT+AGG | - | chr1_4:60030220-60030239 | Msa0174370:intron | 15.0% |
!! | TATATTTGAATGATATTTAC+AGG | - | chr1_4:60030840-60030859 | Msa0174370:intron | 15.0% |
!! | AGGTTTAATTCATTATTAAA+TGG | - | chr1_4:60032285-60032304 | Msa0174370:intron | 15.0% |
!! | GGTTTAATTCATTATTAAAT+GGG | - | chr1_4:60032286-60032305 | Msa0174370:intron | 15.0% |
!!! | TATTTATTTTATACAGCATA+AGG | - | chr1_4:60032677-60032696 | Msa0174370:intron | 15.0% |
!! | GTGATTTAAATATAAACAAT+TGG | - | chr1_4:60033213-60033232 | Msa0174370:intron | 15.0% |
!!! | AATCTCTTCATAAAATTTTT+TGG | - | chr1_4:60033719-60033738 | Msa0174370:intron | 15.0% |
!!! | ATCTCTTCATAAAATTTTTT+GGG | - | chr1_4:60033720-60033739 | Msa0174370:intron | 15.0% |
!!! | TATTATTTTTTTAGACAGTA+TGG | - | chr1_4:60033940-60033959 | Msa0174370:five_prime_UTR | 15.0% |
!!! | TATTTTTTGTGATGTGAAAA+TGG | + | chr1_4:60024332-60024351 | None:intergenic | 20.0% |
!! | AAATGAAAAAAGGAAGATAA+GGG | - | chr1_4:60025253-60025272 | Msa0174370:intron | 20.0% |
!!! | AGAATAAGTTTTTCATTGTT+AGG | + | chr1_4:60025515-60025534 | None:intergenic | 20.0% |
!!! | AAAAACTTATTCTTTTAGTG+TGG | - | chr1_4:60025522-60025541 | Msa0174370:intron | 20.0% |
!! | ATTGAATTAGAAACCATATA+AGG | + | chr1_4:60025772-60025791 | None:intergenic | 20.0% |
!! | TAATGTAATAAAAAACTTGC+AGG | - | chr1_4:60025928-60025947 | Msa0174370:intron | 20.0% |
!! | AATATAGCCAAATAATAACT+TGG | + | chr1_4:60026040-60026059 | None:intergenic | 20.0% |
!! | TAACTAAATAAGATAGCATA+TGG | + | chr1_4:60026129-60026148 | None:intergenic | 20.0% |
!! | AAAACACTAGCATAAAATAT+AGG | - | chr1_4:60026253-60026272 | Msa0174370:intron | 20.0% |
!! | AAACACTAGCATAAAATATA+GGG | - | chr1_4:60026254-60026273 | Msa0174370:intron | 20.0% |
!!! | CAACCATTAATTTTAATTCT+AGG | + | chr1_4:60026700-60026719 | None:intergenic | 20.0% |
!!! | AGGGAATTATTTTTTTTGAA+TGG | - | chr1_4:60026974-60026993 | Msa0174370:CDS | 20.0% |
!! | TGAATTGAATTACATGAATT+GGG | + | chr1_4:60027145-60027164 | None:intergenic | 20.0% |
!! | TTGAATTGAATTACATGAAT+TGG | + | chr1_4:60027146-60027165 | None:intergenic | 20.0% |
!! | AAAACATTATGTTTGTGTAT+TGG | + | chr1_4:60027217-60027236 | None:intergenic | 20.0% |
!!! | TCTTAGTATTCTTTTTGTAT+GGG | + | chr1_4:60027534-60027553 | None:intergenic | 20.0% |
!!! | TTTTGGGATTATTTCTATAA+GGG | + | chr1_4:60027587-60027606 | None:intergenic | 20.0% |
!!! | ATTTTGGGATTATTTCTATA+AGG | + | chr1_4:60027588-60027607 | None:intergenic | 20.0% |
!! | CTTTACATTTCAATGAATAA+AGG | - | chr1_4:60027652-60027671 | Msa0174370:intron | 20.0% |
!!! | TTTTTAATTGGGCATTATTA+AGG | - | chr1_4:60027850-60027869 | Msa0174370:intron | 20.0% |
!!! | TTTTAATTGGGCATTATTAA+GGG | - | chr1_4:60027851-60027870 | Msa0174370:intron | 20.0% |
!! | AAATAAAAAACAGTACAAAC+CGG | + | chr1_4:60028136-60028155 | None:intergenic | 20.0% |
!!! | TTCAAATTTTTTAAAAGGGT+AGG | + | chr1_4:60028618-60028637 | None:intergenic | 20.0% |
!!! | TTAGTATTTTTATCTACCAT+AGG | - | chr1_4:60029800-60029819 | Msa0174370:intron | 20.0% |
!!! | AATTAAATTATCTTTTGTCC+AGG | + | chr1_4:60030639-60030658 | None:intergenic | 20.0% |
!! | TTCTTTGATAGATTTATTCA+TGG | - | chr1_4:60030707-60030726 | Msa0174370:intron | 20.0% |
!! | TCTTTGATAGATTTATTCAT+GGG | - | chr1_4:60030708-60030727 | Msa0174370:intron | 20.0% |
!! | TTATAAGTTCAAGGAAAAAA+TGG | + | chr1_4:60030760-60030779 | None:intergenic | 20.0% |
!!! | ATATATTTTCTAACAATAGG+AGG | + | chr1_4:60030999-60031018 | None:intergenic | 20.0% |
!!! | AATTATTTCTTCCTGAAAAT+AGG | + | chr1_4:60031784-60031803 | None:intergenic | 20.0% |
!! | ATAAAAATCAAATAGCCATT+AGG | + | chr1_4:60033574-60033593 | None:intergenic | 20.0% |
!!! | TTGAAATTTTGATACAATGA+AGG | + | chr1_4:60034033-60034052 | None:intergenic | 20.0% |
!!! | TAAACTGGTTTTTGAGATTT+GGG | + | chr1_4:60024405-60024424 | None:intergenic | 25.0% |
! | GAAGGTTTATAAATCGAATT+TGG | - | chr1_4:60024764-60024783 | Msa0174370:CDS | 25.0% |
! | GTTTATAAATCGAATTTGGA+AGG | - | chr1_4:60024768-60024787 | Msa0174370:CDS | 25.0% |
! | TAACTGTAGCATTAGATTTA+TGG | - | chr1_4:60025164-60025183 | Msa0174370:intron | 25.0% |
! | GAAATGAAAAAAGGAAGATA+AGG | - | chr1_4:60025252-60025271 | Msa0174370:intron | 25.0% |
! | TAGAAAGATTATTCAACACA+GGG | + | chr1_4:60025549-60025568 | None:intergenic | 25.0% |
! | GAAAAAGCAACCTTAAAAAT+CGG | + | chr1_4:60025750-60025769 | None:intergenic | 25.0% |
! | CGTGTAAAAGTAATAATCAA+AGG | + | chr1_4:60025795-60025814 | None:intergenic | 25.0% |
!! | TTATCATGCTCTTTAGAAAT+GGG | - | chr1_4:60025966-60025985 | Msa0174370:intron | 25.0% |
! | TTAGCTTCCAAGTTATTATT+TGG | - | chr1_4:60026030-60026049 | Msa0174370:intron | 25.0% |
! | ATAAAAGACACCTTCATAAA+AGG | - | chr1_4:60026526-60026545 | Msa0174370:CDS | 25.0% |
! | AGCCCTAGAATTAAAATTAA+TGG | - | chr1_4:60026694-60026713 | Msa0174370:CDS | 25.0% |
! | ATTACATGTTCATCTACATA+AGG | - | chr1_4:60026954-60026973 | Msa0174370:CDS | 25.0% |
! | TTACATGTTCATCTACATAA+GGG | - | chr1_4:60026955-60026974 | Msa0174370:CDS | 25.0% |
!!! | GAATTTTTTACATGTTTTGC+AGG | + | chr1_4:60027123-60027142 | None:intergenic | 25.0% |
!!! | ATTTGAGATTTTAATGCTCA+AGG | - | chr1_4:60027261-60027280 | Msa0174370:intron | 25.0% |
! | GTATGGGTCATATATATATA+GGG | + | chr1_4:60027518-60027537 | None:intergenic | 25.0% |
! | TGTATGGGTCATATATATAT+AGG | + | chr1_4:60027519-60027538 | None:intergenic | 25.0% |
!! | GTCTTAGTATTCTTTTTGTA+TGG | + | chr1_4:60027535-60027554 | None:intergenic | 25.0% |
! | AAAGAATACTAAGACTAAGA+AGG | - | chr1_4:60027540-60027559 | Msa0174370:CDS | 25.0% |
! | TTTAATTGGGCATTATTAAG+GGG | - | chr1_4:60027852-60027871 | Msa0174370:intron | 25.0% |
!!! | AAGAAGTATTTCACATCATA+AGG | + | chr1_4:60028224-60028243 | None:intergenic | 25.0% |
! | ATTCTCTTCTCTCTATTAAA+AGG | + | chr1_4:60028290-60028309 | None:intergenic | 25.0% |
!!! | AGAATGAACATTGTTTCTTT+TGG | - | chr1_4:60028305-60028324 | Msa0174370:intron | 25.0% |
!!! | GAATGAACATTGTTTCTTTT+GGG | - | chr1_4:60028306-60028325 | Msa0174370:intron | 25.0% |
! | GAACTTAAAAATTGTATTGG+AGG | - | chr1_4:60028472-60028491 | Msa0174370:intron | 25.0% |
! | TTAAAAATTGTATTGGAGGA+GGG | - | chr1_4:60028476-60028495 | Msa0174370:intron | 25.0% |
!! | TTATTTTCTTTTTTCCTGAG+AGG | - | chr1_4:60028761-60028780 | Msa0174370:intron | 25.0% |
! | ACATCATTTCTGTTGAAATT+TGG | - | chr1_4:60029024-60029043 | Msa0174370:intron | 25.0% |
! | CATCATTTCTGTTGAAATTT+GGG | - | chr1_4:60029025-60029044 | Msa0174370:intron | 25.0% |
! | ATCATTTCTGTTGAAATTTG+GGG | - | chr1_4:60029026-60029045 | Msa0174370:intron | 25.0% |
!! | GTGTAAAAAGAAAGGAATTT+TGG | + | chr1_4:60029579-60029598 | None:intergenic | 25.0% |
! | TAAGTTACGTGTAAAAAGAA+AGG | + | chr1_4:60029587-60029606 | None:intergenic | 25.0% |
! | TAAAAAATCTGTACTAGTGA+AGG | + | chr1_4:60029615-60029634 | None:intergenic | 25.0% |
! | GGTAGATAAAAATACTAACT+TGG | + | chr1_4:60029798-60029817 | None:intergenic | 25.0% |
! | TTTACCAGCAATAGATAAAA+TGG | + | chr1_4:60029829-60029848 | None:intergenic | 25.0% |
! | GCATATTATATAACAGACAT+AGG | + | chr1_4:60030083-60030102 | None:intergenic | 25.0% |
!!! | CTTTTTGTCCAATTTAACTT+TGG | - | chr1_4:60030132-60030151 | Msa0174370:intron | 25.0% |
! | GTATATAACAGCAATAAATG+GGG | + | chr1_4:60030421-60030440 | None:intergenic | 25.0% |
! | CGTATATAACAGCAATAAAT+GGG | + | chr1_4:60030422-60030441 | None:intergenic | 25.0% |
! | TAAAATCAAATTTCCTTCTG+TGG | - | chr1_4:60030805-60030824 | Msa0174370:intron | 25.0% |
! | TTAAAGCTAAAAGCAAATAC+TGG | + | chr1_4:60031137-60031156 | None:intergenic | 25.0% |
!! | AACATTTTGTAATTCTCCTA+TGG | + | chr1_4:60031184-60031203 | None:intergenic | 25.0% |
! | GAATTACAAAATGTTGAAAC+TGG | - | chr1_4:60031189-60031208 | Msa0174370:intron | 25.0% |
!! | TCAATAGCATTTTGTGATTT+CGG | + | chr1_4:60031267-60031286 | None:intergenic | 25.0% |
!!! | AGTCATCATCTAAAATTTTG+CGG | + | chr1_4:60031670-60031689 | None:intergenic | 25.0% |
!! | AAAATTTTAGATGATGACTC+TGG | - | chr1_4:60031671-60031690 | Msa0174370:intron | 25.0% |
!! | AAATTTTAGATGATGACTCT+GGG | - | chr1_4:60031672-60031691 | Msa0174370:intron | 25.0% |
!! | AAGAGAGTTATTTGTTGATT+TGG | - | chr1_4:60031709-60031728 | Msa0174370:intron | 25.0% |
!! | AGTTCATATTTTCCTTTCAA+TGG | - | chr1_4:60032174-60032193 | Msa0174370:intron | 25.0% |
!! | TTTCTATTGACTATGAACTT+CGG | + | chr1_4:60032256-60032275 | None:intergenic | 25.0% |
! | AAGTTCATAGTCAATAGAAA+TGG | - | chr1_4:60032256-60032275 | Msa0174370:intron | 25.0% |
! | GTCAATAGAAATGGAAATAA+AGG | - | chr1_4:60032265-60032284 | Msa0174370:intron | 25.0% |
! | ATTATTAAATGGGTAGTGAA+AGG | - | chr1_4:60032296-60032315 | Msa0174370:intron | 25.0% |
!!! | TTTTAAGAAGAGCATATAAC+AGG | + | chr1_4:60032615-60032634 | None:intergenic | 25.0% |
!!! | TGTTGATTTTTTTCTTCAAG+AGG | - | chr1_4:60032722-60032741 | Msa0174370:CDS | 25.0% |
! | ATTAATGAAAGAAAACAGAG+CGG | + | chr1_4:60032774-60032793 | None:intergenic | 25.0% |
! | TGAAATTGAAATACAATGCA+CGG | - | chr1_4:60032820-60032839 | Msa0174370:intron | 25.0% |
! | GATATTTAATTGCTGTAAAC+TGG | - | chr1_4:60032883-60032902 | Msa0174370:intron | 25.0% |
! | CACAAAAATAGAATATACAC+AGG | - | chr1_4:60033147-60033166 | Msa0174370:intron | 25.0% |
! | AGAACATAAAAAAAGAGCTA+AGG | - | chr1_4:60033791-60033810 | Msa0174370:CDS | 25.0% |
! | GATATATGTTACAAGTTACA+AGG | + | chr1_4:60033909-60033928 | None:intergenic | 25.0% |
! | GACTAATCATTACATATTCA+GGG | + | chr1_4:60034002-60034021 | None:intergenic | 25.0% |
! | TGACTAATCATTACATATTC+AGG | + | chr1_4:60034003-60034022 | None:intergenic | 25.0% |
!!! | AAACTGGTTTTTGAGATTTG+GGG | + | chr1_4:60024404-60024423 | None:intergenic | 30.0% |
!!! | CTAAACTGGTTTTTGAGATT+TGG | + | chr1_4:60024406-60024425 | None:intergenic | 30.0% |
! | TGAAGAATTTGAAGCTAAAC+TGG | + | chr1_4:60024420-60024439 | None:intergenic | 30.0% |
AACACAACAGAGTTCAAAAT+GGG | - | chr1_4:60024481-60024500 | Msa0174370:three_prime_UTR | 30.0% | |
TACATCAGATGAAGTACAAT+TGG | - | chr1_4:60024504-60024523 | Msa0174370:three_prime_UTR | 30.0% | |
! | AGAATGTTCATGTATTGATC+GGG | + | chr1_4:60024661-60024680 | None:intergenic | 30.0% |
! | CAGAATGTTCATGTATTGAT+CGG | + | chr1_4:60024662-60024681 | None:intergenic | 30.0% |
CAAGAGAAAAATAGCTATGA+AGG | + | chr1_4:60025032-60025051 | None:intergenic | 30.0% | |
TCAACAAAACCCAAATACAA+CGG | + | chr1_4:60025084-60025103 | None:intergenic | 30.0% | |
AGGATGAAAAGTAACATTTC+AGG | - | chr1_4:60025106-60025125 | Msa0174370:CDS | 30.0% | |
GGATGAAAAGTAACATTTCA+GGG | - | chr1_4:60025107-60025126 | Msa0174370:CDS | 30.0% | |
AGATAAGGGTTGAATTTGAT+AGG | - | chr1_4:60025267-60025286 | Msa0174370:intron | 30.0% | |
ACACTTCTCTATTTGACAAA+AGG | - | chr1_4:60025348-60025367 | Msa0174370:CDS | 30.0% | |
CACTTCTCTATTTGACAAAA+GGG | - | chr1_4:60025349-60025368 | Msa0174370:CDS | 30.0% | |
ACATACAATGAACAATGACA+TGG | + | chr1_4:60025441-60025460 | None:intergenic | 30.0% | |
ATATTAAATGCGATGCAAGT+TGG | - | chr1_4:60025473-60025492 | Msa0174370:CDS | 30.0% | |
AGAAAGATTATTCAACACAG+GGG | + | chr1_4:60025548-60025567 | None:intergenic | 30.0% | |
GTAGAAAGATTATTCAACAC+AGG | + | chr1_4:60025550-60025569 | None:intergenic | 30.0% | |
! | TCACAGAAACACTTGTTAAA+AGG | + | chr1_4:60025598-60025617 | None:intergenic | 30.0% |
TATAAACTACTCTTCGACAA+GGG | + | chr1_4:60025646-60025665 | None:intergenic | 30.0% | |
ATATAAACTACTCTTCGACA+AGG | + | chr1_4:60025647-60025666 | None:intergenic | 30.0% | |
!!! | AAGGTTGCTTTTTCCTTATA+TGG | - | chr1_4:60025756-60025775 | Msa0174370:intron | 30.0% |
ATATGGAGATTCATCATTCA+AGG | - | chr1_4:60025874-60025893 | Msa0174370:CDS | 30.0% | |
! | CTTATCATGCTCTTTAGAAA+TGG | - | chr1_4:60025965-60025984 | Msa0174370:intron | 30.0% |
TAAATAATCCATATTTCCCC+TGG | + | chr1_4:60026013-60026032 | None:intergenic | 30.0% | |
! | TTATAAGTTTTGCCCATGTT+GGG | + | chr1_4:60026195-60026214 | None:intergenic | 30.0% |
! | TTTATAAGTTTTGCCCATGT+TGG | + | chr1_4:60026196-60026215 | None:intergenic | 30.0% |
! | TTTTAACAAGTCACACCTTA+AGG | - | chr1_4:60026411-60026430 | Msa0174370:intron | 30.0% |
AAAGTGAAAATCACACCTTA+AGG | + | chr1_4:60026429-60026448 | None:intergenic | 30.0% | |
ACACCTTCATAAAAGTAAGT+TGG | - | chr1_4:60026471-60026490 | Msa0174370:intron | 30.0% | |
!! | ACACCAACTTACTTTTATGA+AGG | + | chr1_4:60026477-60026496 | None:intergenic | 30.0% |
! | ATAGAAGACACCTTTTATGA+AGG | + | chr1_4:60026539-60026558 | None:intergenic | 30.0% |
ATAGATATTATGAAAGACGG+TGG | + | chr1_4:60026872-60026891 | None:intergenic | 30.0% | |
AATCTCAAATCAAAGACCAA+CGG | + | chr1_4:60027251-60027270 | None:intergenic | 30.0% | |
AACCATGATTGTAGAAGATA+AGG | - | chr1_4:60027305-60027324 | Msa0174370:intron | 30.0% | |
TCAACCATGAATTTATTCCA+AGG | - | chr1_4:60027435-60027454 | Msa0174370:intron | 30.0% | |
CAACCATGAATTTATTCCAA+GGG | - | chr1_4:60027436-60027455 | Msa0174370:intron | 30.0% | |
!!! | TTTTTTCTTCTCTCTAACCA+GGG | - | chr1_4:60028037-60028056 | Msa0174370:intron | 30.0% |
! | CTTCTTTTTATTGCTCTGTA+TGG | - | chr1_4:60028238-60028257 | Msa0174370:intron | 30.0% |
TCTTCTCTCTATTAAAAGGA+GGG | + | chr1_4:60028286-60028305 | None:intergenic | 30.0% | |
TGGAAGAAATAGAGGAAAAT+GGG | - | chr1_4:60028390-60028409 | Msa0174370:intron | 30.0% | |
GGGGAACTTAAAAATTGTAT+TGG | - | chr1_4:60028469-60028488 | Msa0174370:intron | 30.0% | |
CTTAAAAATTGTATTGGAGG+AGG | - | chr1_4:60028475-60028494 | Msa0174370:intron | 30.0% | |
GAACTAAATCAATAACACCA+AGG | + | chr1_4:60028718-60028737 | None:intergenic | 30.0% | |
! | AGAGGAAGTTTTCTATTTGT+TGG | - | chr1_4:60028779-60028798 | Msa0174370:intron | 30.0% |
TGAACCATTGTTTATTTCCT+CGG | + | chr1_4:60028875-60028894 | None:intergenic | 30.0% | |
! | TTTGCTGTCAACATCTTAAA+GGG | + | chr1_4:60028980-60028999 | None:intergenic | 30.0% |
CTTGAGAAGAGTTTATAAAG+AGG | + | chr1_4:60029097-60029116 | None:intergenic | 30.0% | |
TCCAACAATTTCAATCAAGA+TGG | - | chr1_4:60029252-60029271 | Msa0174370:intron | 30.0% | |
ACCATCTTGATTGAAATTGT+TGG | + | chr1_4:60029256-60029275 | None:intergenic | 30.0% | |
TGATTCTGTGAAGTAATGTA+CGG | - | chr1_4:60029278-60029297 | Msa0174370:intron | 30.0% | |
TCTCTTCCATTTCCTATTAT+AGG | - | chr1_4:60029676-60029695 | Msa0174370:intron | 30.0% | |
! | GATCAAATTTGCTCAAGATT+TGG | - | chr1_4:60029769-60029788 | Msa0174370:intron | 30.0% |
ATAGATAAAATGGCTTCCTA+TGG | + | chr1_4:60029819-60029838 | None:intergenic | 30.0% | |
!!! | TTACTTTTTCAATGTTTGCC+AGG | - | chr1_4:60029867-60029886 | Msa0174370:intron | 30.0% |
AAGATCTGCCAAAGTTAAAT+TGG | + | chr1_4:60030143-60030162 | None:intergenic | 30.0% | |
AAAGACAAGCAAAAACCAAA+TGG | + | chr1_4:60030314-60030333 | None:intergenic | 30.0% | |
GCGTATATAACAGCAATAAA+TGG | + | chr1_4:60030423-60030442 | None:intergenic | 30.0% | |
AAATCCCAGTTTAGCATAAA+TGG | + | chr1_4:60030447-60030466 | None:intergenic | 30.0% | |
! | ACACTTCCTTTTAAACATCT+TGG | - | chr1_4:60030550-60030569 | Msa0174370:intron | 30.0% |
TTGTTGCCAAGATGTTTAAA+AGG | + | chr1_4:60030559-60030578 | None:intergenic | 30.0% | |
TATTTCAACTGTATCAGACA+GGG | + | chr1_4:60030664-60030683 | None:intergenic | 30.0% | |
ATATTTCAACTGTATCAGAC+AGG | + | chr1_4:60030665-60030684 | None:intergenic | 30.0% | |
CAACAAGAGTTATAAGTTCA+AGG | + | chr1_4:60030769-60030788 | None:intergenic | 30.0% | |
AATGAATAACCTCAAGAGAA+TGG | + | chr1_4:60030926-60030945 | None:intergenic | 30.0% | |
GAATTTGAAAACTACAGCTA+AGG | + | chr1_4:60030977-60030996 | None:intergenic | 30.0% | |
TTCATCCTCTGAATATTTGT+AGG | - | chr1_4:60031020-60031039 | Msa0174370:intron | 30.0% | |
AAATGTTGAAACTGGAAAAC+TGG | - | chr1_4:60031197-60031216 | Msa0174370:intron | 30.0% | |
AATGTTGAAACTGGAAAACT+GGG | - | chr1_4:60031198-60031217 | Msa0174370:intron | 30.0% | |
TGATTTCTCTTGGAAAAATC+TGG | - | chr1_4:60031332-60031351 | Msa0174370:intron | 30.0% | |
TTTCTTACAAGTCCTGAAAA+AGG | - | chr1_4:60031413-60031432 | Msa0174370:intron | 30.0% | |
!! | TTTGTTGATTTGGTTCAAGA+AGG | - | chr1_4:60031719-60031738 | Msa0174370:intron | 30.0% |
TATTTCTTCCTGAAAATAGG+AGG | + | chr1_4:60031781-60031800 | None:intergenic | 30.0% | |
! | TTGGATTTGATTTCTGAAAG+TGG | - | chr1_4:60031952-60031971 | Msa0174370:intron | 30.0% |
TGAAAGTGGATAAATTTGTG+TGG | - | chr1_4:60031966-60031985 | Msa0174370:intron | 30.0% | |
AGATTACAAGGAAACTTATG+AGG | + | chr1_4:60032022-60032041 | None:intergenic | 30.0% | |
TAAGTTTCCTTGTAATCTTC+AGG | - | chr1_4:60032024-60032043 | Msa0174370:intron | 30.0% | |
! | AATTTTCTACAGATTTCTCC+CGG | + | chr1_4:60032112-60032131 | None:intergenic | 30.0% |
GAGAAATCTGTAGAAAATTC+CGG | - | chr1_4:60032113-60032132 | Msa0174370:intron | 30.0% | |
CACAAGTGTAATTTCTCTTA+AGG | - | chr1_4:60032351-60032370 | Msa0174370:intron | 30.0% | |
TGCTCTTCTTAAAAACAGAT+TGG | - | chr1_4:60032621-60032640 | Msa0174370:intron | 30.0% | |
!!! | GATTTTTTTCTTCAAGAGGT+TGG | - | chr1_4:60032726-60032745 | Msa0174370:CDS | 30.0% |
ATTTAATTGCTGTAAACTGG+AGG | - | chr1_4:60032886-60032905 | Msa0174370:intron | 30.0% | |
CATTATGTATAACTTCAAGC+TGG | + | chr1_4:60032940-60032959 | None:intergenic | 30.0% | |
! | CAAATTCTTGTACACTTTTC+AGG | + | chr1_4:60033309-60033328 | None:intergenic | 30.0% |
TTCGATTAAAAGTTTGGAGA+CGG | + | chr1_4:60033333-60033352 | None:intergenic | 30.0% | |
ATCCACTTCGATTAAAAGTT+TGG | + | chr1_4:60033339-60033358 | None:intergenic | 30.0% | |
TTCAACTATTTCCCTTATAG+GGG | + | chr1_4:60033398-60033417 | None:intergenic | 30.0% | |
CTTCAACTATTTCCCTTATA+GGG | + | chr1_4:60033399-60033418 | None:intergenic | 30.0% | |
TCTTCAACTATTTCCCTTAT+AGG | + | chr1_4:60033400-60033419 | None:intergenic | 30.0% | |
! | TTTTTATATTCTTTGGGCAC+AGG | - | chr1_4:60033587-60033606 | Msa0174370:CDS | 30.0% |
AAACGTGTATTTATATCAGC+AGG | + | chr1_4:60033764-60033783 | None:intergenic | 30.0% | |
AAAGATGACGAATACAACAA+AGG | + | chr1_4:60033820-60033839 | None:intergenic | 30.0% | |
ATCTTTCGTAGAATTAGTGA+TGG | - | chr1_4:60033834-60033853 | Msa0174370:CDS | 30.0% | |
TTGGCAATTGATTGTTAACT+TGG | - | chr1_4:60033858-60033877 | Msa0174370:CDS | 30.0% | |
! | TTTTTAGACAGTATGGAAAC+TGG | - | chr1_4:60033947-60033966 | Msa0174370:five_prime_UTR | 30.0% |
ACTAACATAATGCACAATCA+GGG | + | chr1_4:60034062-60034081 | None:intergenic | 30.0% | |
!!! | GAGAGGTTATTTTAGTTTCA+AGG | + | chr1_4:60034094-60034113 | None:intergenic | 30.0% |
CAACACAACAGAGTTCAAAA+TGG | - | chr1_4:60024480-60024499 | Msa0174370:three_prime_UTR | 35.0% | |
CGATCAATACATGAACATTC+TGG | - | chr1_4:60024660-60024679 | Msa0174370:three_prime_UTR | 35.0% | |
ACTTCAACGACATGTTGAAA+TGG | - | chr1_4:60024794-60024813 | Msa0174370:CDS | 35.0% | |
TGTGAAAGAACCGTTGTATT+TGG | - | chr1_4:60025071-60025090 | Msa0174370:CDS | 35.0% | |
GTGAAAGAACCGTTGTATTT+GGG | - | chr1_4:60025072-60025091 | Msa0174370:CDS | 35.0% | |
!!! | GTATTTGGGTTTTGTTGAAC+AGG | - | chr1_4:60025086-60025105 | Msa0174370:CDS | 35.0% |
GAAAAGTAACATTTCAGGGA+TGG | - | chr1_4:60025111-60025130 | Msa0174370:CDS | 35.0% | |
AGATAATGTCTGTTCAGTCA+AGG | - | chr1_4:60025312-60025331 | Msa0174370:CDS | 35.0% | |
AGCATATTGAGAAACTGCAT+AGG | - | chr1_4:60025372-60025391 | Msa0174370:CDS | 35.0% | |
TAATCTTCTTCGCAAAGTTC+AGG | - | chr1_4:60025400-60025419 | Msa0174370:CDS | 35.0% | |
CTTGCATCGCATTTAATATG+TGG | + | chr1_4:60025472-60025491 | None:intergenic | 35.0% | |
!! | CAAGTTGGATTTTTGCTGAA+TGG | - | chr1_4:60025488-60025507 | Msa0174370:intron | 35.0% |
TATGATCTTCCTGATAGACT+TGG | - | chr1_4:60025666-60025685 | Msa0174370:intron | 35.0% | |
TACACGCAACATATCAATCT+AGG | - | chr1_4:60025809-60025828 | Msa0174370:intron | 35.0% | |
AGGTCTCAGATGAAATATCT+TGG | - | chr1_4:60025829-60025848 | Msa0174370:intron | 35.0% | |
GGTTATATCCTCTTTCTATC+AGG | - | chr1_4:60025850-60025869 | Msa0174370:CDS | 35.0% | |
TACCATGTTATGAGCTGATA+TGG | + | chr1_4:60026087-60026106 | None:intergenic | 35.0% | |
! | GTTGGGAAAACTGGTTTATA+AGG | + | chr1_4:60026178-60026197 | None:intergenic | 35.0% |
! | ATAAACCAGTTTTCCCAACA+TGG | - | chr1_4:60026179-60026198 | Msa0174370:intron | 35.0% |
! | TAAACCAGTTTTCCCAACAT+GGG | - | chr1_4:60026180-60026199 | Msa0174370:intron | 35.0% |
TGTTAAAAGACACCACCAAA+GGG | + | chr1_4:60026399-60026418 | None:intergenic | 35.0% | |
TTGTTAAAAGACACCACCAA+AGG | + | chr1_4:60026400-60026419 | None:intergenic | 35.0% | |
ATAGACTTGAACAGTTGTGA+GGG | + | chr1_4:60026772-60026791 | None:intergenic | 35.0% | |
TATAGACTTGAACAGTTGTG+AGG | + | chr1_4:60026773-60026792 | None:intergenic | 35.0% | |
TTACTGGTGGAAAGATGAAA+AGG | + | chr1_4:60026806-60026825 | None:intergenic | 35.0% | |
! | TTTTCCATGGTGATAGTTAC+TGG | + | chr1_4:60026822-60026841 | None:intergenic | 35.0% |
! | CAACTTTGCATTGATGTTAC+AGG | - | chr1_4:60027029-60027048 | Msa0174370:intron | 35.0% |
AATCCAACACATTGAGAGAA+GGG | - | chr1_4:60027164-60027183 | Msa0174370:intron | 35.0% | |
ATCTCAAATCAAAGACCAAC+GGG | + | chr1_4:60027250-60027269 | None:intergenic | 35.0% | |
CTCCTTATCTTCTACAATCA+TGG | + | chr1_4:60027310-60027329 | None:intergenic | 35.0% | |
!! | GGGATTATTTCTATAAGGGT+TGG | + | chr1_4:60027583-60027602 | None:intergenic | 35.0% |
!!! | GACACGGTTCATCTTATTTT+GGG | + | chr1_4:60027603-60027622 | None:intergenic | 35.0% |
!! | AGACACGGTTCATCTTATTT+TGG | + | chr1_4:60027604-60027623 | None:intergenic | 35.0% |
ACTTGTTCAATGCATGTTCA+AGG | - | chr1_4:60027883-60027902 | Msa0174370:intron | 35.0% | |
CTTGTTCAATGCATGTTCAA+GGG | - | chr1_4:60027884-60027903 | Msa0174370:intron | 35.0% | |
TTGTTCAATGCATGTTCAAG+GGG | - | chr1_4:60027885-60027904 | Msa0174370:intron | 35.0% | |
!!! | CTTTTTTCTTCTCTCTAACC+AGG | - | chr1_4:60028036-60028055 | Msa0174370:intron | 35.0% |
! | TTTTTCTTCTCTCTAACCAG+GGG | - | chr1_4:60028038-60028057 | Msa0174370:intron | 35.0% |
AGTATTTCACATCATAAGGC+TGG | + | chr1_4:60028220-60028239 | None:intergenic | 35.0% | |
!!! | TTGCTCTGTATGGTTAGTTT+TGG | - | chr1_4:60028248-60028267 | Msa0174370:intron | 35.0% |
!!! | TGCTCTGTATGGTTAGTTTT+GGG | - | chr1_4:60028249-60028268 | Msa0174370:intron | 35.0% |
CTCTTCTCTCTATTAAAAGG+AGG | + | chr1_4:60028287-60028306 | None:intergenic | 35.0% | |
GTGGAAGAAATAGAGGAAAA+TGG | - | chr1_4:60028389-60028408 | Msa0174370:intron | 35.0% | |
AAGAAATAGAGGAAAATGGG+AGG | - | chr1_4:60028393-60028412 | Msa0174370:intron | 35.0% | |
AGAAATAGAGGAAAATGGGA+GGG | - | chr1_4:60028394-60028413 | Msa0174370:intron | 35.0% | |
AATACTAAACCCTCCTCATT+TGG | - | chr1_4:60028447-60028466 | Msa0174370:intron | 35.0% | |
ATACTAAACCCTCCTCATTT+GGG | - | chr1_4:60028448-60028467 | Msa0174370:intron | 35.0% | |
!!! | TTTTTAAGTTCCCCCAAATG+AGG | + | chr1_4:60028463-60028482 | None:intergenic | 35.0% |
GTGGAAAATATGAGGGAAAA+TGG | + | chr1_4:60028649-60028668 | None:intergenic | 35.0% | |
CAAATAGAAAACTTCCTCTC+AGG | + | chr1_4:60028778-60028797 | None:intergenic | 35.0% | |
!! | GAAGTTTTCTATTTGTTGGC+AGG | - | chr1_4:60028783-60028802 | Msa0174370:intron | 35.0% |
ACAATCCATTACAGACATTC+AGG | - | chr1_4:60028843-60028862 | Msa0174370:intron | 35.0% | |
AACCATTGTTTATTTCCTCG+GGG | + | chr1_4:60028873-60028892 | None:intergenic | 35.0% | |
GAACCATTGTTTATTTCCTC+GGG | + | chr1_4:60028874-60028893 | None:intergenic | 35.0% | |
GAGGAAATAAACAATGGTTC+AGG | - | chr1_4:60028874-60028893 | Msa0174370:intron | 35.0% | |
TTGCTGTCAACATCTTAAAG+GGG | + | chr1_4:60028979-60028998 | None:intergenic | 35.0% | |
!! | GTTTGCTGTCAACATCTTAA+AGG | + | chr1_4:60028981-60029000 | None:intergenic | 35.0% |
GAGAAGAGTTTATAAAGAGG+AGG | + | chr1_4:60029094-60029113 | None:intergenic | 35.0% | |
GGAATGACCTATCTTCTATA+AGG | + | chr1_4:60029348-60029367 | None:intergenic | 35.0% | |
CAAATCATCTTCTCATAGAG+TGG | + | chr1_4:60029369-60029388 | None:intergenic | 35.0% | |
CTCTATGAGAAGATGATTTG+TGG | - | chr1_4:60029369-60029388 | Msa0174370:intron | 35.0% | |
TTGTGGTTCTTAAACTGTTG+AGG | - | chr1_4:60029386-60029405 | Msa0174370:intron | 35.0% | |
! | GAACTTGAAAATTGCTGACT+TGG | - | chr1_4:60029419-60029438 | Msa0174370:intron | 35.0% |
TTGCTGCCTATAATAGGAAA+TGG | + | chr1_4:60029685-60029704 | None:intergenic | 35.0% | |
AGCAACTCATGAATTTATGG+AGG | - | chr1_4:60029700-60029719 | Msa0174370:intron | 35.0% | |
GAAATATCACTAGAAGAGCA+CGG | + | chr1_4:60029730-60029749 | None:intergenic | 35.0% | |
TGCTCTTCTAGTGATATTTC+CGG | - | chr1_4:60029730-60029749 | Msa0174370:intron | 35.0% | |
!! | ATCAACTGCTTTTCTGAATC+CGG | + | chr1_4:60029752-60029771 | None:intergenic | 35.0% |
!! | GAAGCCATTTTATCTATTGC+TGG | - | chr1_4:60029822-60029841 | Msa0174370:intron | 35.0% |
ATTCACCCAGAAGATTTACT+CGG | - | chr1_4:60029926-60029945 | Msa0174370:intron | 35.0% | |
!! | TTTGCTACTTTCCCAATTTC+TGG | - | chr1_4:60029971-60029990 | Msa0174370:intron | 35.0% |
CAAGCATATGTCCAGAAATT+GGG | + | chr1_4:60029985-60030004 | None:intergenic | 35.0% | |
TCAAGCATATGTCCAGAAAT+TGG | + | chr1_4:60029986-60030005 | None:intergenic | 35.0% | |
AGTTCCACATTAAGTAGATG+TGG | - | chr1_4:60030040-60030059 | Msa0174370:intron | 35.0% | |
TGCATATAATCAGGAGAACA+GGG | + | chr1_4:60030290-60030309 | None:intergenic | 35.0% | |
ATGCATATAATCAGGAGAAC+AGG | + | chr1_4:60030291-60030310 | None:intergenic | 35.0% | |
CCAAATGGATGCATATAATC+AGG | + | chr1_4:60030299-60030318 | None:intergenic | 35.0% | |
CCTGATTATATGCATCCATT+TGG | - | chr1_4:60030296-60030315 | Msa0174370:intron | 35.0% | |
!! | TTGGTTTTTGCTTGTCTTTC+TGG | - | chr1_4:60030315-60030334 | Msa0174370:CDS | 35.0% |
AGTTCAAGGAAAAAATGGCT+TGG | + | chr1_4:60030755-60030774 | None:intergenic | 35.0% | |
TGATATTTACAGGAGTTGTC+TGG | - | chr1_4:60030850-60030869 | Msa0174370:intron | 35.0% | |
GATATTTACAGGAGTTGTCT+GGG | - | chr1_4:60030851-60030870 | Msa0174370:intron | 35.0% | |
AGGTTATTCATTGATGCCAT+TGG | - | chr1_4:60030934-60030953 | Msa0174370:intron | 35.0% | |
CAGAATCAAATTTGAGCCAA+TGG | + | chr1_4:60030953-60030972 | None:intergenic | 35.0% | |
CGTAATCACATGATTTCTCT+TGG | - | chr1_4:60031322-60031341 | Msa0174370:intron | 35.0% | |
TTTCTCTTGGAAAAATCTGG+TGG | - | chr1_4:60031335-60031354 | Msa0174370:intron | 35.0% | |
TTACAAGTCCTGAAAAAGGA+TGG | - | chr1_4:60031417-60031436 | Msa0174370:intron | 35.0% | |
! | ATTTTATCTCTCTCCCTTCA+GGG | - | chr1_4:60031641-60031660 | Msa0174370:intron | 35.0% |
AGCTATTCAAGTACATGGTT+TGG | - | chr1_4:60031808-60031827 | Msa0174370:intron | 35.0% | |
! | ATCGATGAAAAAGCTTTTCC+TGG | - | chr1_4:60031842-60031861 | Msa0174370:intron | 35.0% |
ATCAAATCCAAGTCTACAAG+TGG | + | chr1_4:60031943-60031962 | None:intergenic | 35.0% | |
! | GCTATTTCCTGAAGATTACA+AGG | + | chr1_4:60032034-60032053 | None:intergenic | 35.0% |
! | TATGAACTTGAAAGCATACC+AGG | + | chr1_4:60032162-60032181 | None:intergenic | 35.0% |
TGAACTGCAATTCCATTGAA+AGG | + | chr1_4:60032189-60032208 | None:intergenic | 35.0% | |
TTAAATGGGTAGTGAAAGGA+TGG | - | chr1_4:60032300-60032319 | Msa0174370:intron | 35.0% | |
!! | TTCCTTGAATGCTTTGGTTT+TGG | - | chr1_4:60032443-60032462 | Msa0174370:intron | 35.0% |
! | AACCAAAACCAAAGCATTCA+AGG | + | chr1_4:60032448-60032467 | None:intergenic | 35.0% |
!!! | GAATGCTTTGGTTTTGGTTT+TGG | - | chr1_4:60032449-60032468 | Msa0174370:intron | 35.0% |
ACATAAATATGAGAACCCAG+AGG | - | chr1_4:60032536-60032555 | Msa0174370:CDS | 35.0% | |
TTTCACTTATCCTGAAGAAG+AGG | - | chr1_4:60032560-60032579 | Msa0174370:intron | 35.0% | |
!! | GAATATACACAGGTATTGAG+TGG | - | chr1_4:60033157-60033176 | Msa0174370:intron | 35.0% |
TGTCGGCAAAAATGATATGA+TGG | + | chr1_4:60033246-60033265 | None:intergenic | 35.0% | |
! | CTCCAAACTTTTAATCGAAG+TGG | - | chr1_4:60033334-60033353 | Msa0174370:intron | 35.0% |
TGGATTCCAACAAATTCAAC+TGG | - | chr1_4:60033354-60033373 | Msa0174370:intron | 35.0% | |
GGATATCCAGTTGAATTTGT+TGG | + | chr1_4:60033363-60033382 | None:intergenic | 35.0% | |
AATAGTTGAAGATGAAGCTG+CGG | - | chr1_4:60033408-60033427 | Msa0174370:intron | 35.0% | |
TGTACAAGTTTGTCCAGTAT+AGG | + | chr1_4:60033663-60033682 | None:intergenic | 35.0% | |
CAAACTTGTACAAGCAAAGT+TGG | - | chr1_4:60033671-60033690 | Msa0174370:intron | 35.0% | |
!! | GATTGTTGTGTTTTGTTCCT+TGG | + | chr1_4:60033703-60033722 | None:intergenic | 35.0% |
TGTATTTATATCAGCAGGTC+GGG | + | chr1_4:60033759-60033778 | None:intergenic | 35.0% | |
GTGTATTTATATCAGCAGGT+CGG | + | chr1_4:60033760-60033779 | None:intergenic | 35.0% | |
TCGTAGAATTAGTGATGGTT+TGG | - | chr1_4:60033839-60033858 | Msa0174370:CDS | 35.0% | |
TATGGAAACTGGATAGTTTC+AGG | - | chr1_4:60033958-60033977 | Msa0174370:five_prime_UTR | 35.0% | |
ATGGAAACTGGATAGTTTCA+GGG | - | chr1_4:60033959-60033978 | Msa0174370:five_prime_UTR | 35.0% | |
GACTAACATAATGCACAATC+AGG | + | chr1_4:60034063-60034082 | None:intergenic | 35.0% | |
! | ATCGAGAGAAGCGTATTTAG+GGG | + | chr1_4:60024614-60024633 | None:intergenic | 40.0% |
! | CATCGAGAGAAGCGTATTTA+GGG | + | chr1_4:60024615-60024634 | None:intergenic | 40.0% |
! | TCATCGAGAGAAGCGTATTT+AGG | + | chr1_4:60024616-60024635 | None:intergenic | 40.0% |
CAATAAGTTCATCAGCGCTA+CGG | - | chr1_4:60024872-60024891 | Msa0174370:intron | 40.0% | |
ACACCTTCGATCAGAAATGT+CGG | + | chr1_4:60024922-60024941 | None:intergenic | 40.0% | |
TTCAGGGATGGAGACTAATA+TGG | - | chr1_4:60025123-60025142 | Msa0174370:CDS | 40.0% | |
CTTAAAAATCGGCATTGCTC+CGG | + | chr1_4:60025739-60025758 | None:intergenic | 40.0% | |
TCCTCTTTCTATCAGGCATA+TGG | - | chr1_4:60025857-60025876 | Msa0174370:CDS | 40.0% | |
TCCATATGCCTGATAGAAAG+AGG | + | chr1_4:60025861-60025880 | None:intergenic | 40.0% | |
ATCAGTCAACATTTCAAGCC+AGG | - | chr1_4:60025992-60026011 | Msa0174370:intron | 40.0% | |
TCAGTCAACATTTCAAGCCA+GGG | - | chr1_4:60025993-60026012 | Msa0174370:intron | 40.0% | |
ATTTCAAGCCAGGGGAAATA+TGG | - | chr1_4:60026002-60026021 | Msa0174370:intron | 40.0% | |
AGCCATATCAGCTCATAACA+TGG | - | chr1_4:60026082-60026101 | Msa0174370:intron | 40.0% | |
ATAACATGGTATGAGACCCT+TGG | - | chr1_4:60026096-60026115 | Msa0174370:intron | 40.0% | |
! | TTTTGTTACAAGCCACCCTT+TGG | - | chr1_4:60026381-60026400 | Msa0174370:intron | 40.0% |
TAGACTTGAACAGTTGTGAG+GGG | + | chr1_4:60026771-60026790 | None:intergenic | 40.0% | |
!! | GTGCTTGTTGGTATTTTCCA+TGG | + | chr1_4:60026835-60026854 | None:intergenic | 40.0% |
TATTATGAAAGACGGTGGCA+TGG | + | chr1_4:60026867-60026886 | None:intergenic | 40.0% | |
! | GCATTGATGTTACAGGTACA+AGG | - | chr1_4:60027036-60027055 | Msa0174370:intron | 40.0% |
! | GTTTTGCAGGTTTCGATTAC+AGG | + | chr1_4:60027110-60027129 | None:intergenic | 40.0% |
CAATCCAACACATTGAGAGA+AGG | - | chr1_4:60027163-60027182 | Msa0174370:intron | 40.0% | |
ATCCAACACATTGAGAGAAG+GGG | - | chr1_4:60027165-60027184 | Msa0174370:intron | 40.0% | |
!!! | GTTTTTTACAGCAAACCCGT+TGG | - | chr1_4:60027232-60027251 | Msa0174370:intron | 40.0% |
CAGCCCTTGGAATAAATTCA+TGG | + | chr1_4:60027442-60027461 | None:intergenic | 40.0% | |
ATTCTTATGCGAGAGTGAGA+GGG | + | chr1_4:60027473-60027492 | None:intergenic | 40.0% | |
TATTCTTATGCGAGAGTGAG+AGG | + | chr1_4:60027474-60027493 | None:intergenic | 40.0% | |
TCTCACTCTCGCATAAGAAT+AGG | - | chr1_4:60027473-60027492 | Msa0174370:intron | 40.0% | |
ACCGTGTCTCTTAAAACTAC+TGG | - | chr1_4:60027615-60027634 | Msa0174370:intron | 40.0% | |
!!! | CCCAGTAGTTTTAAGAGACA+CGG | + | chr1_4:60027619-60027638 | None:intergenic | 40.0% |
CCGTGTCTCTTAAAACTACT+GGG | - | chr1_4:60027616-60027635 | Msa0174370:intron | 40.0% | |
CGTGTCTCTTAAAACTACTG+GGG | - | chr1_4:60027617-60027636 | Msa0174370:intron | 40.0% | |
GACTGTCATCCTATAAAGCA+AGG | + | chr1_4:60027951-60027970 | None:intergenic | 40.0% | |
ATCAATACAAGTGAGAGCAG+AGG | - | chr1_4:60028081-60028100 | Msa0174370:intron | 40.0% | |
! | CCTTAAGCAGTTGGATTTTC+CGG | - | chr1_4:60028114-60028133 | Msa0174370:intron | 40.0% |
GGAAAAAAGGAATGAGCAAG+TGG | - | chr1_4:60028370-60028389 | Msa0174370:intron | 40.0% | |
TGAGCAAGTGGAAGAAATAG+AGG | - | chr1_4:60028382-60028401 | Msa0174370:intron | 40.0% | |
GAAATAGAGGAAAATGGGAG+GGG | - | chr1_4:60028395-60028414 | Msa0174370:intron | 40.0% | |
TACTAAACCCTCCTCATTTG+GGG | - | chr1_4:60028449-60028468 | Msa0174370:intron | 40.0% | |
! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr1_4:60028482-60028501 | Msa0174370:CDS | 40.0% |
! | TTGTATTGGAGGAGGGTTTT+GGG | - | chr1_4:60028483-60028502 | Msa0174370:CDS | 40.0% |
TTGAGGGGTGGAAAATATGA+GGG | + | chr1_4:60028656-60028675 | None:intergenic | 40.0% | |
TTTGAGGGGTGGAAAATATG+AGG | + | chr1_4:60028657-60028676 | None:intergenic | 40.0% | |
TCAACATCTTAAAGGGGCAA+GGG | + | chr1_4:60028973-60028992 | None:intergenic | 40.0% | |
!! | CAGTTTTGTAAGGACGAGTT+AGG | + | chr1_4:60029052-60029071 | None:intergenic | 40.0% |
CTAACTCGTCCTTACAAAAC+TGG | - | chr1_4:60029050-60029069 | Msa0174370:intron | 40.0% | |
!! | CCTTACAAGCCAGTTTTGTA+AGG | + | chr1_4:60029062-60029081 | None:intergenic | 40.0% |
!! | CCTTACAAAACTGGCTTGTA+AGG | - | chr1_4:60029059-60029078 | Msa0174370:intron | 40.0% |
!! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr1_4:60029153-60029172 | None:intergenic | 40.0% |
!! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr1_4:60029154-60029173 | None:intergenic | 40.0% |
CTGCAATTAAGGCTAACCAA+AGG | - | chr1_4:60029184-60029203 | Msa0174370:intron | 40.0% | |
CTAACCAAAGGTCGCAATTT+AGG | - | chr1_4:60029196-60029215 | Msa0174370:intron | 40.0% | |
TGGAAATTCCGCCTTAATTG+CGG | + | chr1_4:60029236-60029255 | None:intergenic | 40.0% | |
CAATTCTGGATGCCTATCTT+AGG | - | chr1_4:60029313-60029332 | Msa0174370:intron | 40.0% | |
GGGTCATCCTTATAGAAGAT+AGG | - | chr1_4:60029338-60029357 | Msa0174370:intron | 40.0% | |
!! | TTGCTGACTTGGCTAATAAC+AGG | - | chr1_4:60029430-60029449 | Msa0174370:intron | 40.0% |
CATGAGTTGCTGCCTATAAT+AGG | + | chr1_4:60029691-60029710 | None:intergenic | 40.0% | |
GGCAGCAACTCATGAATTTA+TGG | - | chr1_4:60029697-60029716 | Msa0174370:intron | 40.0% | |
GAACACCGAGTAAATCTTCT+GGG | + | chr1_4:60029934-60029953 | None:intergenic | 40.0% | |
AGAACACCGAGTAAATCTTC+TGG | + | chr1_4:60029935-60029954 | None:intergenic | 40.0% | |
TGTGCCACATCTACTTAATG+TGG | + | chr1_4:60030047-60030066 | None:intergenic | 40.0% | |
! | GGTGCATTCATGGAAAGTAT+AGG | + | chr1_4:60030266-60030285 | None:intergenic | 40.0% |
ATATAATCAGGAGAACAGGG+TGG | + | chr1_4:60030287-60030306 | None:intergenic | 40.0% | |
TGGATGTCTTTATTGCAACG+TGG | - | chr1_4:60030335-60030354 | Msa0174370:CDS | 40.0% | |
ACGCACCATTTATGCTAAAC+TGG | - | chr1_4:60030439-60030458 | Msa0174370:intron | 40.0% | |
CGCACCATTTATGCTAAACT+GGG | - | chr1_4:60030440-60030459 | Msa0174370:intron | 40.0% | |
TCATCTGAAAATGTGATGCC+TGG | - | chr1_4:60030618-60030637 | Msa0174370:intron | 40.0% | |
ATCATAGTCAAAGCCACAGA+AGG | + | chr1_4:60030821-60030840 | None:intergenic | 40.0% | |
CTGGTAAGACTTCATCTATC+AGG | + | chr1_4:60030887-60030906 | None:intergenic | 40.0% | |
TCTCTCTAACCATTCTCTTG+AGG | - | chr1_4:60030914-60030933 | Msa0174370:intron | 40.0% | |
TGCAGCCTACAAATATTCAG+AGG | + | chr1_4:60031028-60031047 | None:intergenic | 40.0% | |
CATCTTCTGCAAGACATTTC+AGG | - | chr1_4:60031087-60031106 | Msa0174370:intron | 40.0% | |
TATTTACTGTACCACGCCAT+AGG | - | chr1_4:60031165-60031184 | Msa0174370:intron | 40.0% | |
TTTGTAATTCTCCTATGGCG+TGG | + | chr1_4:60031179-60031198 | None:intergenic | 40.0% | |
TCGAAAACAAGTTGTCAGCT+TGG | + | chr1_4:60031238-60031257 | None:intergenic | 40.0% | |
GGAATCAAGAACAGCTTCTA+GGG | + | chr1_4:60031457-60031476 | None:intergenic | 40.0% | |
TGGAATCAAGAACAGCTTCT+AGG | + | chr1_4:60031458-60031477 | None:intergenic | 40.0% | |
!! | TTGCAGAACTGCTTTTGTAC+TGG | + | chr1_4:60031478-60031497 | None:intergenic | 40.0% |
AGTACAAAAGCAGTTCTGCA+AGG | - | chr1_4:60031477-60031496 | Msa0174370:intron | 40.0% | |
! | CATTTTATCTCTCTCCCTTC+AGG | - | chr1_4:60031640-60031659 | Msa0174370:intron | 40.0% |
! | GATCAGTTCCTCCTATTTTC+AGG | - | chr1_4:60031770-60031789 | Msa0174370:intron | 40.0% |
TCCTCAGCTATTCAAGTACA+TGG | - | chr1_4:60031803-60031822 | Msa0174370:intron | 40.0% | |
ACCATGTACTTGAATAGCTG+AGG | + | chr1_4:60031807-60031826 | None:intergenic | 40.0% | |
! | TCCTTGCCTCAGTGATTTTT+GGG | + | chr1_4:60031919-60031938 | None:intergenic | 40.0% |
! | ATCCTTGCCTCAGTGATTTT+TGG | + | chr1_4:60031920-60031939 | None:intergenic | 40.0% |
AACTTATGAGGAATGCAGTG+AGG | + | chr1_4:60032010-60032029 | None:intergenic | 40.0% | |
! | GAAATAGCTGCTTCCTTTTC+TGG | - | chr1_4:60032046-60032065 | Msa0174370:intron | 40.0% |
TCTAACACTACCACCAGAAA+AGG | + | chr1_4:60032062-60032081 | None:intergenic | 40.0% | |
!! | TTTTCTGGTGGTAGTGTTAG+AGG | - | chr1_4:60032061-60032080 | Msa0174370:intron | 40.0% |
ATCTAGACCTGCATTTGTTC+CGG | - | chr1_4:60032090-60032109 | Msa0174370:intron | 40.0% | |
! | TCGTCTAGCTTGATTTCCAA+AGG | - | chr1_4:60032377-60032396 | Msa0174370:intron | 40.0% |
CAGGATAAGTGAAATCCTCT+GGG | + | chr1_4:60032554-60032573 | None:intergenic | 40.0% | |
TCAGGATAAGTGAAATCCTC+TGG | + | chr1_4:60032555-60032574 | None:intergenic | 40.0% | |
GTGTTGTAAACCTCTTCTTC+AGG | + | chr1_4:60032573-60032592 | None:intergenic | 40.0% | |
AGAGGTTTACAACACCGAAT+TGG | - | chr1_4:60032578-60032597 | Msa0174370:intron | 40.0% | |
GAGGTTTACAACACCGAATT+GGG | - | chr1_4:60032579-60032598 | Msa0174370:intron | 40.0% | |
TACAACACCGAATTGGGTTA+AGG | - | chr1_4:60032585-60032604 | Msa0174370:intron | 40.0% | |
ACAAACATGTGCACTTCTCT+CGG | + | chr1_4:60032705-60032724 | None:intergenic | 40.0% | |
TGGGTAGGTCAAATACTCAA+AGG | - | chr1_4:60033062-60033081 | Msa0174370:CDS | 40.0% | |
GGGTAGGTCAAATACTCAAA+GGG | - | chr1_4:60033063-60033082 | Msa0174370:CDS | 40.0% | |
! | GGTATTGAGTGGCATCATAT+TGG | - | chr1_4:60033168-60033187 | Msa0174370:intron | 40.0% |
AACTGGATATCCAGTTCCTA+AGG | - | chr1_4:60033371-60033390 | Msa0174370:intron | 40.0% | |
ACTTCTTGCTTGATGAGGTT+GGG | - | chr1_4:60033434-60033453 | Msa0174370:intron | 40.0% | |
CTTCTCTATGCATCTCCTAA+TGG | - | chr1_4:60033556-60033575 | Msa0174370:CDS | 40.0% | |
GTGTCTTGATCCAATTCCAT+TGG | - | chr1_4:60033632-60033651 | Msa0174370:CDS | 40.0% | |
ACAAGTTTGTCCAGTATAGG+AGG | + | chr1_4:60033660-60033679 | None:intergenic | 40.0% | |
AGCAAAGTTGGCTAAAACCA+AGG | - | chr1_4:60033683-60033702 | Msa0174370:intron | 40.0% | |
TGGAAACTGGATAGTTTCAG+GGG | - | chr1_4:60033960-60033979 | Msa0174370:five_prime_UTR | 40.0% | |
CAGAGTTGGAGGAATTGGAA+GGG | + | chr1_4:60024582-60024601 | None:intergenic | 45.0% | |
TTGATCGGGATCGAATTCAG+AGG | + | chr1_4:60024647-60024666 | None:intergenic | 45.0% | |
GCGCTACGGATACTATAAAG+AGG | - | chr1_4:60024886-60024905 | Msa0174370:intron | 45.0% | |
ACACCGACATTTCTGATCGA+AGG | - | chr1_4:60024916-60024935 | Msa0174370:intron | 45.0% | |
! | TTTCTGATCGAAGGTGTGTC+CGG | - | chr1_4:60024925-60024944 | Msa0174370:intron | 45.0% |
TATGGAACAGCTTCTCGACA+AGG | - | chr1_4:60025141-60025160 | Msa0174370:CDS | 45.0% | |
ATGCACTTGCCAAGTCTATC+AGG | + | chr1_4:60025678-60025697 | None:intergenic | 45.0% | |
!!! | CGGAGCAATGCCGATTTTTA+AGG | - | chr1_4:60025737-60025756 | Msa0174370:intron | 45.0% |
CAGTCAACATTTCAAGCCAG+GGG | - | chr1_4:60025994-60026013 | Msa0174370:intron | 45.0% | |
TTTGCCCATGTTGGGAAAAC+TGG | + | chr1_4:60026187-60026206 | None:intergenic | 45.0% | |
!! | GAAGCTCATTGACTCTGATG+TGG | - | chr1_4:60026223-60026242 | Msa0174370:intron | 45.0% |
TAAAAGACACCACCAAAGGG+TGG | + | chr1_4:60026396-60026415 | None:intergenic | 45.0% | |
AAAGCCTATACGTGAGTGAG+AGG | - | chr1_4:60026661-60026680 | Msa0174370:CDS | 45.0% | |
AAGCCTATACGTGAGTGAGA+GGG | - | chr1_4:60026662-60026681 | Msa0174370:CDS | 45.0% | |
TCCACCAGTAACTATCACCA+TGG | - | chr1_4:60026815-60026834 | Msa0174370:intron | 45.0% | |
TCCATGGTGATAGTTACTGG+TGG | + | chr1_4:60026819-60026838 | None:intergenic | 45.0% | |
GGTTTCGATTACAGGAGGTA+AGG | + | chr1_4:60027102-60027121 | None:intergenic | 45.0% | |
TTGCAGGTTTCGATTACAGG+AGG | + | chr1_4:60027107-60027126 | None:intergenic | 45.0% | |
TCCAACACATTGAGAGAAGG+GGG | - | chr1_4:60027166-60027185 | Msa0174370:intron | 45.0% | |
TAAGGAGCTGCAGTTCACAA+AGG | - | chr1_4:60027323-60027342 | Msa0174370:intron | 45.0% | |
AAGGAGCTGCAGTTCACAAA+GGG | - | chr1_4:60027324-60027343 | Msa0174370:intron | 45.0% | |
TGCAGTTCACAAAGGGTGAA+GGG | - | chr1_4:60027331-60027350 | Msa0174370:CDS | 45.0% | |
CAAAGGGTGAAGGGAGAAAA+CGG | - | chr1_4:60027340-60027359 | Msa0174370:CDS | 45.0% | |
ACGGTGTGTAAGAGGAAAAC+AGG | - | chr1_4:60027359-60027378 | Msa0174370:CDS | 45.0% | |
CGGTGTGTAAGAGGAAAACA+GGG | - | chr1_4:60027360-60027379 | Msa0174370:CDS | 45.0% | |
GGTGTGTAAGAGGAAAACAG+GGG | - | chr1_4:60027361-60027380 | Msa0174370:CDS | 45.0% | |
! | ATAGCTTGCAGACAGACCAA+GGG | + | chr1_4:60027809-60027828 | None:intergenic | 45.0% |
!! | ATGCATGTTCAAGGGGTGTT+TGG | - | chr1_4:60027892-60027911 | Msa0174370:intron | 45.0% |
!! | TGCATGTTCAAGGGGTGTTT+GGG | - | chr1_4:60027893-60027912 | Msa0174370:intron | 45.0% |
!! | GAGAGGTGTCCTTGCTTTAT+AGG | - | chr1_4:60027939-60027958 | Msa0174370:intron | 45.0% |
AATCTGAGAATAGCTTCCCC+TGG | + | chr1_4:60028057-60028076 | None:intergenic | 45.0% | |
CCGGAAAATCCAACTGCTTA+AGG | + | chr1_4:60028117-60028136 | None:intergenic | 45.0% | |
! | ATTAAAAGGAGGGCACACGA+AGG | + | chr1_4:60028276-60028295 | None:intergenic | 45.0% |
!! | TTGGGCTTTGTTTGCGAGTT+TGG | - | chr1_4:60028324-60028343 | Msa0174370:intron | 45.0% |
!! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr1_4:60028328-60028347 | Msa0174370:intron | 45.0% |
! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr1_4:60028329-60028348 | Msa0174370:intron | 45.0% |
ACTAAACCCTCCTCATTTGG+GGG | - | chr1_4:60028450-60028469 | Msa0174370:intron | 45.0% | |
TAAGTTCCCCCAAATGAGGA+GGG | + | chr1_4:60028459-60028478 | None:intergenic | 45.0% | |
TTAAGTTCCCCCAAATGAGG+AGG | + | chr1_4:60028460-60028479 | None:intergenic | 45.0% | |
! | TGTATTGGAGGAGGGTTTTG+GGG | - | chr1_4:60028484-60028503 | Msa0174370:CDS | 45.0% |
! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr1_4:60028329-60028348 | None:intergenic | 45.0% |
!! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr1_4:60028328-60028347 | None:intergenic | 45.0% |
!! | CAAGGCTTTGTTTGCGAGTT+TGG | + | chr1_4:60028700-60028719 | None:intergenic | 45.0% |
CAAACTCGCAAACAAAGCCT+TGG | - | chr1_4:60028698-60028717 | Msa0174370:CDS | 45.0% | |
GCTCACCTGAATGTCTGTAA+TGG | + | chr1_4:60028851-60028870 | None:intergenic | 45.0% | |
AGCCCCGAGGAAATAAACAA+TGG | - | chr1_4:60028868-60028887 | Msa0174370:intron | 45.0% | |
GAGAAGATGCTGAAGGAGAA+AGG | + | chr1_4:60028903-60028922 | None:intergenic | 45.0% | |
TCCTTCAGCATCTTCTCACA+AGG | - | chr1_4:60028906-60028925 | Msa0174370:intron | 45.0% | |
ACCTTGTGAGAAGATGCTGA+AGG | + | chr1_4:60028910-60028929 | None:intergenic | 45.0% | |
GTCAACATCTTAAAGGGGCA+AGG | + | chr1_4:60028974-60028993 | None:intergenic | 45.0% | |
!! | CAAAACTGGCTTGTAAGGTG+AGG | - | chr1_4:60029064-60029083 | Msa0174370:intron | 45.0% |
! | AGAGTGCTATCTATCCGATG+TGG | - | chr1_4:60029115-60029134 | Msa0174370:intron | 45.0% |
GAGTGCTATCTATCCGATGT+GGG | - | chr1_4:60029116-60029135 | Msa0174370:intron | 45.0% | |
!! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr1_4:60029152-60029171 | None:intergenic | 45.0% |
!! | CCTTCATTGTGTTGGCTTTG+AGG | + | chr1_4:60029155-60029174 | None:intergenic | 45.0% |
CCTCAAAGCCAACACAATGA+AGG | - | chr1_4:60029152-60029171 | Msa0174370:intron | 45.0% | |
! | AGCCAACACAATGAAGGTGT+TGG | - | chr1_4:60029158-60029177 | Msa0174370:intron | 45.0% |
CTCCAACACCTTCATTGTGT+TGG | + | chr1_4:60029163-60029182 | None:intergenic | 45.0% | |
!! | CAACACAATGAAGGTGTTGG+AGG | - | chr1_4:60029161-60029180 | Msa0174370:intron | 45.0% |
! | GGCTCTGATCTGAACAATTC+TGG | - | chr1_4:60029299-60029318 | Msa0174370:intron | 45.0% |
TCTGGATGCCTATCTTAGGT+TGG | - | chr1_4:60029317-60029336 | Msa0174370:intron | 45.0% | |
CTGGATGCCTATCTTAGGTT+GGG | - | chr1_4:60029318-60029337 | Msa0174370:intron | 45.0% | |
AGGATGACCCAACCTAAGAT+AGG | + | chr1_4:60029328-60029347 | None:intergenic | 45.0% | |
! | TGCCAGGAATTTTGCAACTG+CGG | - | chr1_4:60029883-60029902 | Msa0174370:intron | 45.0% |
AGGCCTGAATGTGTTGAAAG+TGG | - | chr1_4:60030240-60030259 | Msa0174370:intron | 45.0% | |
! | AGGCCACTTTCAACACATTC+AGG | + | chr1_4:60030246-60030265 | None:intergenic | 45.0% |
ACAAAAGCAGTTCTGCAAGG+AGG | - | chr1_4:60031480-60031499 | Msa0174370:intron | 45.0% | |
! | AATTTTGCGGAAGCCCTGAA+GGG | + | chr1_4:60031657-60031676 | None:intergenic | 45.0% |
! | AAATTTTGCGGAAGCCCTGA+AGG | + | chr1_4:60031658-60031677 | None:intergenic | 45.0% |
! | CAAGTACATGGTTTGGCAGA+AGG | - | chr1_4:60031815-60031834 | Msa0174370:intron | 45.0% |
TGTCGTCCCAAAAATCACTG+AGG | - | chr1_4:60031910-60031929 | Msa0174370:intron | 45.0% | |
TCCCAAAAATCACTGAGGCA+AGG | - | chr1_4:60031915-60031934 | Msa0174370:intron | 45.0% | |
CAAGGATCCACTTGTAGACT+TGG | - | chr1_4:60031933-60031952 | Msa0174370:intron | 45.0% | |
GAATGCAGTGAGGATATGGA+AGG | + | chr1_4:60032000-60032019 | None:intergenic | 45.0% | |
TGAGGAATGCAGTGAGGATA+TGG | + | chr1_4:60032004-60032023 | None:intergenic | 45.0% | |
! | ATAGCTGCTTCCTTTTCTGG+TGG | - | chr1_4:60032049-60032068 | Msa0174370:intron | 45.0% |
TCTAGACCTGCATTTGTTCC+GGG | - | chr1_4:60032091-60032110 | Msa0174370:intron | 45.0% | |
ATTTCTCCCGGAACAAATGC+AGG | + | chr1_4:60032100-60032119 | None:intergenic | 45.0% | |
TGTAGAAAATTCCGGTCAGC+TGG | - | chr1_4:60032121-60032140 | Msa0174370:intron | 45.0% | |
! | GGAATTTTTCACCAGCTGAC+CGG | + | chr1_4:60032135-60032154 | None:intergenic | 45.0% |
TGGTGAAAAATTCCTGCACC+TGG | - | chr1_4:60032141-60032160 | Msa0174370:intron | 45.0% | |
ATGGGTAGTGAAAGGATGGT+AGG | - | chr1_4:60032304-60032323 | Msa0174370:intron | 45.0% | |
TGGGTAGTGAAAGGATGGTA+GGG | - | chr1_4:60032305-60032324 | Msa0174370:intron | 45.0% | |
!! | GTGAAGCTTGCTAGTTCCTT+TGG | + | chr1_4:60032396-60032415 | None:intergenic | 45.0% |
GTGCTCTTCCTTGAATGCTT+TGG | - | chr1_4:60032437-60032456 | Msa0174370:intron | 45.0% | |
AGGCTGACCTTAACCCAATT+CGG | + | chr1_4:60032595-60032614 | None:intergenic | 45.0% | |
! | GTGAAGCAGATTTTGCCTCA+AGG | - | chr1_4:60032962-60032981 | Msa0174370:intron | 45.0% |
TTCCGTTACTATCAGTCCTG+CGG | + | chr1_4:60033000-60033019 | None:intergenic | 45.0% | |
CATCAAGAAGCAATCCCTTG+CGG | - | chr1_4:60033029-60033048 | Msa0174370:CDS | 45.0% | |
ATCAAGAAGCAATCCCTTGC+GGG | - | chr1_4:60033030-60033049 | Msa0174370:CDS | 45.0% | |
GGTCAAATACTCAAAGGGCA+AGG | - | chr1_4:60033068-60033087 | Msa0174370:CDS | 45.0% | |
CTAGATGTGTTTCCAGAAGC+TGG | + | chr1_4:60033096-60033115 | None:intergenic | 45.0% | |
! | CATTTTTGCCGACAAACTGC+AGG | - | chr1_4:60033252-60033271 | Msa0174370:intron | 45.0% |
AACAGACTCCTGCAGTTTGT+CGG | + | chr1_4:60033263-60033282 | None:intergenic | 45.0% | |
TTATAGGGGTCCTTAGGAAC+TGG | + | chr1_4:60033384-60033403 | None:intergenic | 45.0% | |
AGTTCCTAAGGACCCCTATA+AGG | - | chr1_4:60033383-60033402 | Msa0174370:intron | 45.0% | |
GTTCCTAAGGACCCCTATAA+GGG | - | chr1_4:60033384-60033403 | Msa0174370:intron | 45.0% | |
TTTCCCTTATAGGGGTCCTT+AGG | + | chr1_4:60033390-60033409 | None:intergenic | 45.0% | |
! | GGTTGACTTCTTGCTTGATG+AGG | - | chr1_4:60033429-60033448 | Msa0174370:intron | 45.0% |
GACTTCTTGCTTGATGAGGT+TGG | - | chr1_4:60033433-60033452 | Msa0174370:intron | 45.0% | |
TTTGTTGCAACCTCATCCCT+AGG | - | chr1_4:60033516-60033535 | Msa0174370:intron | 45.0% | |
GAGAAGACAAGGAGAAGCTA+GGG | + | chr1_4:60033542-60033561 | None:intergenic | 45.0% | |
AGAGAAGACAAGGAGAAGCT+AGG | + | chr1_4:60033543-60033562 | None:intergenic | 45.0% | |
GGAGATGCATAGAGAAGACA+AGG | + | chr1_4:60033553-60033572 | None:intergenic | 45.0% | |
ATAGGAGGCTCCAATGGAAT+TGG | + | chr1_4:60033645-60033664 | None:intergenic | 45.0% | |
TTTATATCAGCAGGTCGGGA+AGG | + | chr1_4:60033755-60033774 | None:intergenic | 45.0% | |
!!! | AAATAATTATTTTTTTTTGA+AGG | - | chr1_4:60024347-60024366 | Msa0174370:three_prime_UTR | 5.0% |
!!! | AAAAAAAATAGTTTTTTAAT+TGG | - | chr1_4:60027838-60027857 | Msa0174370:intron | 5.0% |
!!! | AAAAAAATAGTTTTTTAATT+GGG | - | chr1_4:60027839-60027858 | Msa0174370:intron | 5.0% |
AGGGTCTGGAGAGTAGAAAC+TGG | + | chr1_4:60024563-60024582 | None:intergenic | 50.0% | |
TTGGAGGAATTGGAAGGGTC+TGG | + | chr1_4:60024577-60024596 | None:intergenic | 50.0% | |
GCAGAGTTGGAGGAATTGGA+AGG | + | chr1_4:60024583-60024602 | None:intergenic | 50.0% | |
GATCGCAGAGTTGGAGGAAT+TGG | + | chr1_4:60024587-60024606 | None:intergenic | 50.0% | |
TGTCAGTGTCAGACACACAC+CGG | + | chr1_4:60024947-60024966 | None:intergenic | 50.0% | |
CGGCGTGTTAGTGTTGTGTT+CGG | - | chr1_4:60024993-60025012 | Msa0174370:CDS | 50.0% | |
TGGCAAGTGCATCAAGTCAG+AGG | - | chr1_4:60025686-60025705 | Msa0174370:intron | 50.0% | |
! | GACGCAGTCAGGTTTTACAC+CGG | - | chr1_4:60025717-60025736 | Msa0174370:CDS | 50.0% |
ACATGGTATGAGACCCTTGG+CGG | - | chr1_4:60026099-60026118 | Msa0174370:intron | 50.0% | |
AGCATATGGCTATCCGCCAA+GGG | + | chr1_4:60026115-60026134 | None:intergenic | 50.0% | |
TAGCATATGGCTATCCGCCA+AGG | + | chr1_4:60026116-60026135 | None:intergenic | 50.0% | |
TGTTACAAGCCACCCTTTGG+TGG | - | chr1_4:60026384-60026403 | Msa0174370:intron | 50.0% | |
TGACCCTCTCACTCACGTAT+AGG | + | chr1_4:60026668-60026687 | None:intergenic | 50.0% | |
TGGTAGTAGCTGGTGCTTGT+TGG | + | chr1_4:60026847-60026866 | None:intergenic | 50.0% | |
TCCCCCTTCTCTCAATGTGT+TGG | + | chr1_4:60027170-60027189 | None:intergenic | 50.0% | |
CTGCAGTTCACAAAGGGTGA+AGG | - | chr1_4:60027330-60027349 | Msa0174370:CDS | 50.0% | |
GGGAGAAAACGGTGTGTAAG+AGG | - | chr1_4:60027351-60027370 | Msa0174370:CDS | 50.0% | |
!! | GATAGAAGTGTCCTACCGAG+AGG | - | chr1_4:60027768-60027787 | Msa0174370:intron | 50.0% |
! | CATAGCTTGCAGACAGACCA+AGG | + | chr1_4:60027810-60027829 | None:intergenic | 50.0% |
TGTCACCCAACACTGCAGTT+TGG | - | chr1_4:60027917-60027936 | Msa0174370:intron | 50.0% | |
CCTCTCCAAACTGCAGTGTT+GGG | + | chr1_4:60027925-60027944 | None:intergenic | 50.0% | |
ACCTCTCCAAACTGCAGTGT+TGG | + | chr1_4:60027926-60027945 | None:intergenic | 50.0% | |
TGCTGTGCTCCTTAAGCAGT+TGG | - | chr1_4:60028105-60028124 | Msa0174370:intron | 50.0% | |
!! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr1_4:60028327-60028346 | Msa0174370:intron | 50.0% |
TTTGCGAGTTTGGAGGGGAA+GGG | - | chr1_4:60028334-60028353 | Msa0174370:intron | 50.0% | |
AGGGGAAGGCTTGGGAAAAA+AGG | - | chr1_4:60028357-60028376 | Msa0174370:intron | 50.0% | |
ATAGAGGAAAATGGGAGGGG+AGG | - | chr1_4:60028398-60028417 | Msa0174370:intron | 50.0% | |
TAGAGGAAAATGGGAGGGGA+GGG | - | chr1_4:60028399-60028418 | Msa0174370:intron | 50.0% | |
! | AAAATGGGAGGGGAGGGTTT+TGG | - | chr1_4:60028405-60028424 | Msa0174370:intron | 50.0% |
! | AAATGGGAGGGGAGGGTTTT+GGG | - | chr1_4:60028406-60028425 | Msa0174370:intron | 50.0% |
!! | GTATTGGAGGAGGGTTTTGG+GGG | - | chr1_4:60028485-60028504 | Msa0174370:CDS | 50.0% |
!!! | TATTGGAGGAGGGTTTTGGG+GGG | - | chr1_4:60028486-60028505 | Msa0174370:CDS | 50.0% |
! | AGGGGAAGGAAAGGCTTTGA+GGG | + | chr1_4:60028672-60028691 | None:intergenic | 50.0% |
!! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr1_4:60028327-60028346 | None:intergenic | 50.0% |
ACATCTTAAAGGGGCAAGGG+AGG | + | chr1_4:60028970-60028989 | None:intergenic | 50.0% | |
! | GGGTGGATTTAGTCCCACAT+CGG | + | chr1_4:60029132-60029151 | None:intergenic | 50.0% |
! | GGTGTTGGAGGCTGCAATTA+AGG | - | chr1_4:60029173-60029192 | Msa0174370:intron | 50.0% |
GTCGCCTAAATTGCGACCTT+TGG | + | chr1_4:60029203-60029222 | None:intergenic | 50.0% | |
AGGTCGCAATTTAGGCGACT+AGG | - | chr1_4:60029204-60029223 | Msa0174370:intron | 50.0% | |
GGTCGCAATTTAGGCGACTA+GGG | - | chr1_4:60029205-60029224 | Msa0174370:intron | 50.0% | |
GTCGCAATTTAGGCGACTAG+GGG | - | chr1_4:60029206-60029225 | Msa0174370:intron | 50.0% | |
CTCCGCAGTTGCAAAATTCC+TGG | + | chr1_4:60029888-60029907 | None:intergenic | 50.0% | |
! | CAGGAATTTTGCAACTGCGG+AGG | - | chr1_4:60029886-60029905 | Msa0174370:intron | 50.0% |
AGAACAGGGTGGTGCATTCA+TGG | + | chr1_4:60030276-60030295 | None:intergenic | 50.0% | |
TGGTTAGAGAGAGCTGCTTC+TGG | + | chr1_4:60030906-60030925 | None:intergenic | 50.0% | |
! | GCTCTGCTCCATCCTTTTTC+AGG | + | chr1_4:60031428-60031447 | None:intergenic | 50.0% |
ATTGTGCCAGCACTAGGACA+AGG | + | chr1_4:60031868-60031887 | None:intergenic | 50.0% | |
!! | CCTAGTGCTGGCACAATTGT+CGG | - | chr1_4:60031871-60031890 | Msa0174370:intron | 50.0% |
! | CTTGAAAGCATACCAGGTGC+AGG | + | chr1_4:60032156-60032175 | None:intergenic | 50.0% |
CGGTGCTTACGTATACCTTG+AGG | + | chr1_4:60032980-60032999 | None:intergenic | 50.0% | |
! | AAGGTATACGTAAGCACCGC+AGG | - | chr1_4:60032981-60033000 | Msa0174370:intron | 50.0% |
CACCGCAGGACTGATAGTAA+CGG | - | chr1_4:60032995-60033014 | Msa0174370:intron | 50.0% | |
! | TGGGAGAAACAGTGTTGCTG+TGG | - | chr1_4:60033453-60033472 | Msa0174370:intron | 50.0% |
TGATTGTCGCTACTGCAGAG+CGG | - | chr1_4:60033610-60033629 | Msa0174370:CDS | 50.0% | |
TCCATTGGAGCCTCCTATAC+TGG | - | chr1_4:60033647-60033666 | Msa0174370:CDS | 50.0% | |
TCCAGTATAGGAGGCTCCAA+TGG | + | chr1_4:60033651-60033670 | None:intergenic | 50.0% | |
GGAAGTGATCGCAGAGTTGG+AGG | + | chr1_4:60024593-60024612 | None:intergenic | 55.0% | |
AGGGGAAGTGATCGCAGAGT+TGG | + | chr1_4:60024596-60024615 | None:intergenic | 55.0% | |
GAGGGTCGATTATCAGCCCT+TGG | + | chr1_4:60027455-60027474 | None:intergenic | 55.0% | |
!! | AGAAGTGTCCTACCGAGAGG+AGG | - | chr1_4:60027771-60027790 | Msa0174370:intron | 55.0% |
ATTGAGCCGACACCTCCTCT+CGG | + | chr1_4:60027786-60027805 | None:intergenic | 55.0% | |
CCCAACACTGCAGTTTGGAG+AGG | - | chr1_4:60027922-60027941 | Msa0174370:intron | 55.0% | |
GTTTGCGAGTTTGGAGGGGA+AGG | - | chr1_4:60028333-60028352 | Msa0174370:intron | 55.0% | |
! | AATGGGAGGGGAGGGTTTTG+GGG | - | chr1_4:60028407-60028426 | Msa0174370:intron | 55.0% |
!!! | AGGAGGGTTTTGGGGGGTTT+TGG | - | chr1_4:60028492-60028511 | Msa0174370:CDS | 55.0% |
!!! | AGGGTTTTGGGGGGTTTTGG+AGG | - | chr1_4:60028495-60028514 | Msa0174370:CDS | 55.0% |
!!! | GGGTTTTGGGGGGTTTTGGA+GGG | - | chr1_4:60028496-60028515 | Msa0174370:CDS | 55.0% |
!! | GAAGGAAAGGCTTTGAGGGG+TGG | + | chr1_4:60028668-60028687 | None:intergenic | 55.0% |
!! | GGGGAAGGAAAGGCTTTGAG+GGG | + | chr1_4:60028671-60028690 | None:intergenic | 55.0% |
GAGGGGAAGGAAAGGCTTTG+AGG | + | chr1_4:60028673-60028692 | None:intergenic | 55.0% | |
TTTGCGAGTTTGGAGGGGAG+GGG | + | chr1_4:60028690-60028709 | None:intergenic | 55.0% | |
GTTTGCGAGTTTGGAGGGGA+GGG | + | chr1_4:60028333-60028352 | None:intergenic | 55.0% | |
TGTTTGCGAGTTTGGAGGGG+AGG | + | chr1_4:60028332-60028351 | None:intergenic | 55.0% | |
TCTTAAAGGGGCAAGGGAGG+AGG | + | chr1_4:60028967-60028986 | None:intergenic | 55.0% | |
!! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr1_4:60029149-60029168 | None:intergenic | 55.0% |
GCAATTTAGGCGACTAGGGG+CGG | - | chr1_4:60029209-60029228 | Msa0174370:intron | 55.0% | |
! | CGGAGGAGTACGTGAAGACA+CGG | - | chr1_4:60029903-60029922 | Msa0174370:intron | 55.0% |
! | AGGAGGCATGAACGTCTTGC+TGG | - | chr1_4:60031497-60031516 | Msa0174370:intron | 55.0% |
CCGACAATTGTGCCAGCACT+AGG | + | chr1_4:60031874-60031893 | None:intergenic | 55.0% | |
AAGAAGCAATCCCTTGCGGG+AGG | - | chr1_4:60033033-60033052 | Msa0174370:CDS | 55.0% | |
CAAGGAGAAGCTAGGGCCTA+GGG | + | chr1_4:60033535-60033554 | None:intergenic | 55.0% | |
ACAAGGAGAAGCTAGGGCCT+AGG | + | chr1_4:60033536-60033555 | None:intergenic | 55.0% | |
AGGCGTATGCAGACGCAGTC+AGG | - | chr1_4:60025706-60025725 | Msa0174370:CDS | 60.0% | |
GACGGTGGCATGGTAGTAGC+TGG | + | chr1_4:60026857-60026876 | None:intergenic | 60.0% | |
! | GTCCTACCGAGAGGAGGTGT+CGG | - | chr1_4:60027777-60027796 | Msa0174370:intron | 60.0% |
!! | GAGGTGTCGGCTCAATCCCT+TGG | - | chr1_4:60027790-60027809 | Msa0174370:intron | 60.0% |
CGAGTTTGGAGGGGAAGGGA+GGG | - | chr1_4:60028338-60028357 | Msa0174370:intron | 60.0% | |
GAGTTTGGAGGGGAAGGGAG+GGG | - | chr1_4:60028339-60028358 | Msa0174370:intron | 60.0% | |
!! | ATGGGAGGGGAGGGTTTTGG+GGG | - | chr1_4:60028408-60028427 | Msa0174370:intron | 60.0% |
TTGGAGGGGAGGGGAAGGAA+AGG | + | chr1_4:60028681-60028700 | None:intergenic | 60.0% | |
AGACATTCAGGTGAGCCCCG+AGG | - | chr1_4:60028855-60028874 | Msa0174370:intron | 60.0% | |
CTAGGGGCGGACCGCAATTA+AGG | - | chr1_4:60029222-60029241 | Msa0174370:intron | 60.0% | |
!! | TCCTGGCCTTGTCCTAGTGC+TGG | - | chr1_4:60031859-60031878 | Msa0174370:intron | 60.0% |
TCCCTTGCGGGAGGAGAAGT+TGG | - | chr1_4:60033042-60033061 | Msa0174370:CDS | 60.0% | |
CCCAACTTCTCCTCCCGCAA+GGG | + | chr1_4:60033046-60033065 | None:intergenic | 60.0% | |
CCCTTGCGGGAGGAGAAGTT+GGG | - | chr1_4:60033043-60033062 | Msa0174370:CDS | 60.0% | |
ACCCAACTTCTCCTCCCGCA+AGG | + | chr1_4:60033047-60033066 | None:intergenic | 60.0% | |
TGCGGGAGGAGAAGTTGGGT+AGG | - | chr1_4:60033047-60033066 | Msa0174370:CDS | 60.0% | |
AAGGGCAAGGAGCCAGCTTC+TGG | - | chr1_4:60033081-60033100 | Msa0174370:CDS | 60.0% | |
GAAGCTAGGGCCTAGGGATG+AGG | + | chr1_4:60033529-60033548 | None:intergenic | 60.0% | |
AGCCGACACCTCCTCTCGGT+AGG | + | chr1_4:60027782-60027801 | None:intergenic | 65.0% | |
GCGAGTTTGGAGGGGAAGGG+AGG | - | chr1_4:60028337-60028356 | Msa0174370:intron | 65.0% | |
TTGGAGGGGAAGGGAGGGGA+AGG | - | chr1_4:60028343-60028362 | Msa0174370:intron | 65.0% | |
GGGAAGGGAGGGGAAGGCTT+GGG | - | chr1_4:60028349-60028368 | Msa0174370:intron | 65.0% | |
!!! | TGGGAGGGGAGGGTTTTGGG+GGG | - | chr1_4:60028409-60028428 | Msa0174370:intron | 65.0% |
CGAGTTTGGAGGGGAGGGGA+AGG | + | chr1_4:60028686-60028705 | None:intergenic | 65.0% | |
GGGGCGGACCGCAATTAAGG+CGG | - | chr1_4:60029225-60029244 | Msa0174370:intron | 65.0% | |
GCCAGCACTAGGACAAGGCC+AGG | + | chr1_4:60031863-60031882 | None:intergenic | 65.0% | |
GGGGAAGGGAGGGGAAGGCT+TGG | - | chr1_4:60028348-60028367 | Msa0174370:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 60024318 | 60034120 | 60024318 | ID=Msa0174370;Name=Msa0174370 |
chr1_4 | mRNA | 60024318 | 60034120 | 60024318 | ID=Msa0174370-mRNA-1;Parent=Msa0174370;Name=Msa0174370-mRNA-1;_AED=0.15;_eAED=0.15;_QI=158|0.95|0.95|1|0.95|0.90|21|389|781 |
chr1_4 | exon | 60024318 | 60024829 | 60024318 | ID=Msa0174370-mRNA-1:exon:18907;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60024964 | 60025164 | 60024964 | ID=Msa0174370-mRNA-1:exon:18906;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60025270 | 60025497 | 60025270 | ID=Msa0174370-mRNA-1:exon:18905;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60025695 | 60025745 | 60025695 | ID=Msa0174370-mRNA-1:exon:18904;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60025832 | 60025903 | 60025832 | ID=Msa0174370-mRNA-1:exon:18903;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60026276 | 60026392 | 60026276 | ID=Msa0174370-mRNA-1:exon:18902;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60026507 | 60026776 | 60026507 | ID=Msa0174370-mRNA-1:exon:18901;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60026920 | 60027029 | 60026920 | ID=Msa0174370-mRNA-1:exon:18900;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60027330 | 60027396 | 60027330 | ID=Msa0174370-mRNA-1:exon:18899;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60027503 | 60027576 | 60027503 | ID=Msa0174370-mRNA-1:exon:18898;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60028482 | 60028549 | 60028482 | ID=Msa0174370-mRNA-1:exon:18897;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60028640 | 60028740 | 60028640 | ID=Msa0174370-mRNA-1:exon:18896;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60029511 | 60029633 | 60029511 | ID=Msa0174370-mRNA-1:exon:18895;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60030303 | 60030380 | 60030303 | ID=Msa0174370-mRNA-1:exon:18894;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60032489 | 60032566 | 60032489 | ID=Msa0174370-mRNA-1:exon:18893;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60032680 | 60032778 | 60032680 | ID=Msa0174370-mRNA-1:exon:18892;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60033017 | 60033124 | 60033017 | ID=Msa0174370-mRNA-1:exon:18891;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60033276 | 60033330 | 60033276 | ID=Msa0174370-mRNA-1:exon:18890;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60033531 | 60033670 | 60033531 | ID=Msa0174370-mRNA-1:exon:18889;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60033757 | 60034069 | 60033757 | ID=Msa0174370-mRNA-1:exon:18888;Parent=Msa0174370-mRNA-1 |
chr1_4 | exon | 60034093 | 60034120 | 60034093 | ID=Msa0174370-mRNA-1:exon:18887;Parent=Msa0174370-mRNA-1 |
chr1_4 | five_prime_UTR | 60034093 | 60034120 | 60034093 | ID=Msa0174370-mRNA-1:five_prime_utr;Parent=Msa0174370-mRNA-1 |
chr1_4 | five_prime_UTR | 60033940 | 60034069 | 60033940 | ID=Msa0174370-mRNA-1:five_prime_utr;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60033757 | 60033939 | 60033757 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60033531 | 60033670 | 60033531 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60033276 | 60033330 | 60033276 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60033017 | 60033124 | 60033017 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60032680 | 60032778 | 60032680 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60032489 | 60032566 | 60032489 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60030303 | 60030380 | 60030303 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60029511 | 60029633 | 60029511 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60028640 | 60028740 | 60028640 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60028482 | 60028549 | 60028482 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60027503 | 60027576 | 60027503 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60027330 | 60027396 | 60027330 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60026920 | 60027029 | 60026920 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60026507 | 60026776 | 60026507 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60026276 | 60026392 | 60026276 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60025832 | 60025903 | 60025832 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60025695 | 60025745 | 60025695 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60025270 | 60025497 | 60025270 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60024964 | 60025164 | 60024964 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | CDS | 60024707 | 60024829 | 60024707 | ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1 |
chr1_4 | three_prime_UTR | 60024318 | 60024706 | 60024318 | ID=Msa0174370-mRNA-1:three_prime_utr;Parent=Msa0174370-mRNA-1 |
Gene Sequence |
Protein sequence |