AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0174370


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174370 MtrunA17_Chr1g0194711 97.567 781 4 2 1 781 1 766 0.0 1552
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174370 AT4G02030.1 65.190 790 241 10 9 781 8 780 0.0 1024
Msa0174370 AT4G02030.2 63.190 815 241 11 9 781 8 805 0.0 1008

Find 165 sgRNAs with CRISPR-Local

Find 661 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAACTATTTCCCTTATA+GGG 0.151677 1_4:+60025020 None:intergenic
TCTTCAACTATTTCCCTTAT+AGG 0.173079 1_4:+60025019 None:intergenic
CATCTTCTGCAAGACATTTC+AGG 0.175998 1_4:-60027329 Msa0174370:intron
GAAGGTTTATAAATCGAATT+TGG 0.209971 1_4:-60033652 Msa0174370:intron
ATCCACTTCGATTAAAAGTT+TGG 0.231217 1_4:+60025080 None:intergenic
TCATCGAGAGAAGCGTATTT+AGG 0.234180 1_4:+60033803 None:intergenic
TGACTAATCATTACATATTC+AGG 0.239821 1_4:+60024416 None:intergenic
AAGGGCAAGGAGCCAGCTTC+TGG 0.249954 1_4:-60025335 Msa0174370:CDS
TTTCTTACAAGTCCTGAAAA+AGG 0.250474 1_4:-60027003 Msa0174370:CDS
AAGAGAGTTATTTGTTGATT+TGG 0.273495 1_4:-60026707 Msa0174370:CDS
TGCTCTTCTAGTGATATTTC+CGG 0.275316 1_4:-60028686 Msa0174370:CDS
AATTATTTCTTCCTGAAAAT+AGG 0.291970 1_4:+60026635 None:intergenic
TATGGAAACTGGATAGTTTC+AGG 0.303218 1_4:-60024458 Msa0174370:three_prime_UTR
TGAAGAATTTGAAGCTAAAC+TGG 0.308207 1_4:+60033999 None:intergenic
CAACACAACAGAGTTCAAAA+TGG 0.315642 1_4:-60033936 Msa0174370:exon
GATCAAATTTGCTCAAGATT+TGG 0.317279 1_4:-60028647 Msa0174370:CDS
TCCATTGGAGCCTCCTATAC+TGG 0.319337 1_4:-60024769 Msa0174370:CDS
GGCAGCAACTCATGAATTTA+TGG 0.320539 1_4:-60028719 Msa0174370:CDS
AGTTCCTAAGGACCCCTATA+AGG 0.323442 1_4:-60025033 Msa0174370:CDS
ATCTAGACCTGCATTTGTTC+CGG 0.333083 1_4:-60026326 Msa0174370:CDS
CATCGAGAGAAGCGTATTTA+GGG 0.343440 1_4:+60033804 None:intergenic
TGGAATCAAGAACAGCTTCT+AGG 0.343664 1_4:+60026961 None:intergenic
GACTAACATAATGCACAATC+AGG 0.354535 1_4:+60024356 None:intergenic
AGAGGTTTACAACACCGAAT+TGG 0.358846 1_4:-60025838 Msa0174370:CDS
AGGATGAAAAGTAACATTTC+AGG 0.360428 1_4:-60033310 Msa0174370:CDS
ATGCACTTGCCAAGTCTATC+AGG 0.360884 1_4:+60032741 None:intergenic
TAATCTTCTTCGCAAAGTTC+AGG 0.361843 1_4:-60033016 Msa0174370:intron
TGAACCATTGTTTATTTCCT+CGG 0.362479 1_4:+60029544 None:intergenic
TGATATTTACAGGAGTTGTC+TGG 0.363716 1_4:-60027566 Msa0174370:intron
ACTTCTTGCTTGATGAGGTT+GGG 0.365195 1_4:-60024982 Msa0174370:CDS
TCCTGGCCTTGTCCTAGTGC+TGG 0.365219 1_4:-60026557 Msa0174370:CDS
ATCAAGAAGCAATCCCTTGC+GGG 0.367586 1_4:-60025386 Msa0174370:CDS
ACAATCCATTACAGACATTC+AGG 0.368263 1_4:-60029573 Msa0174370:CDS
TTGGAGGAATTGGAAGGGTC+TGG 0.376148 1_4:+60033842 None:intergenic
TTCAGGGATGGAGACTAATA+TGG 0.378226 1_4:-60033293 Msa0174370:CDS
GGATATCCAGTTGAATTTGT+TGG 0.381501 1_4:+60025056 None:intergenic
GTGTTGTAAACCTCTTCTTC+AGG 0.383008 1_4:+60025846 None:intergenic
AGAACACCGAGTAAATCTTC+TGG 0.386716 1_4:+60028484 None:intergenic
CGATCAATACATGAACATTC+TGG 0.387356 1_4:-60033756 Msa0174370:intron
GATCGCAGAGTTGGAGGAAT+TGG 0.389281 1_4:+60033832 None:intergenic
TCCTCTTTCTATCAGGCATA+TGG 0.393277 1_4:-60032559 Msa0174370:intron
ATAGGAGGCTCCAATGGAAT+TGG 0.395022 1_4:+60024774 None:intergenic
CCTAGTGCTGGCACAATTGT+CGG 0.395692 1_4:-60026545 Msa0174370:CDS
CTAGATGTGTTTCCAGAAGC+TGG 0.396388 1_4:+60025323 None:intergenic
GAGAAATCTGTAGAAAATTC+CGG 0.399984 1_4:-60026303 Msa0174370:CDS
TCTAGACCTGCATTTGTTCC+GGG 0.403764 1_4:-60026325 Msa0174370:CDS
TCAGGATAAGTGAAATCCTC+TGG 0.410654 1_4:+60025864 None:intergenic
GAGGTTTACAACACCGAATT+GGG 0.410869 1_4:-60025837 Msa0174370:CDS
TACATCAGATGAAGTACAAT+TGG 0.411378 1_4:-60033912 Msa0174370:CDS
CCGGAAAATCCAACTGCTTA+AGG 0.413095 1_4:+60030302 None:intergenic
ACACTTCTCTATTTGACAAA+AGG 0.414313 1_4:-60033068 Msa0174370:CDS
TTTCCCTTATAGGGGTCCTT+AGG 0.415796 1_4:+60025029 None:intergenic
GACTTCTTGCTTGATGAGGT+TGG 0.416635 1_4:-60024983 Msa0174370:CDS
TGGTTAGAGAGAGCTGCTTC+TGG 0.419415 1_4:+60027513 None:intergenic
TCGTAGAATTAGTGATGGTT+TGG 0.419478 1_4:-60024577 Msa0174370:three_prime_UTR
TACAACACCGAATTGGGTTA+AGG 0.424939 1_4:-60025831 Msa0174370:intron
TCCCTTGCGGGAGGAGAAGT+TGG 0.427620 1_4:-60025374 Msa0174370:CDS
AGCTATTCAAGTACATGGTT+TGG 0.427838 1_4:-60026608 Msa0174370:CDS
GAACCATTGTTTATTTCCTC+GGG 0.432864 1_4:+60029545 None:intergenic
CTGGTAAGACTTCATCTATC+AGG 0.435374 1_4:+60027532 None:intergenic
TGGATTCCAACAAATTCAAC+TGG 0.439659 1_4:-60025062 Msa0174370:CDS
GAGGAAATAAACAATGGTTC+AGG 0.440575 1_4:-60029542 Msa0174370:CDS
TTATAGGGGTCCTTAGGAAC+TGG 0.440883 1_4:+60025035 None:intergenic
TCCTCAGCTATTCAAGTACA+TGG 0.446202 1_4:-60026613 Msa0174370:CDS
CAAACTTGTACAAGCAAAGT+TGG 0.456417 1_4:-60024745 Msa0174370:CDS
GTTCCTAAGGACCCCTATAA+GGG 0.461615 1_4:-60025032 Msa0174370:CDS
CAGAATGTTCATGTATTGAT+CGG 0.469227 1_4:+60033757 None:intergenic
GGAATCAAGAACAGCTTCTA+GGG 0.470050 1_4:+60026962 None:intergenic
AGGCTGACCTTAACCCAATT+CGG 0.471401 1_4:+60025824 None:intergenic
AGGAGGCATGAACGTCTTGC+TGG 0.471550 1_4:-60026919 Msa0174370:intron
TTGGCAATTGATTGTTAACT+TGG 0.476905 1_4:-60024558 Msa0174370:three_prime_UTR
TGCTGTGCTCCTTAAGCAGT+TGG 0.478591 1_4:-60030311 Msa0174370:CDS
CCGACAATTGTGCCAGCACT+AGG 0.481310 1_4:+60026545 None:intergenic
CAAGTACATGGTTTGGCAGA+AGG 0.482157 1_4:-60026601 Msa0174370:CDS
TTTGTTGATTTGGTTCAAGA+AGG 0.483059 1_4:-60026697 Msa0174370:CDS
CCCTTGCGGGAGGAGAAGTT+GGG 0.483687 1_4:-60025373 Msa0174370:CDS
ACTTCAACGACATGTTGAAA+TGG 0.484246 1_4:-60033622 Msa0174370:CDS
AGGGTCTGGAGAGTAGAAAC+TGG 0.485286 1_4:+60033856 None:intergenic
TGTATTTATATCAGCAGGTC+GGG 0.488709 1_4:+60024660 None:intergenic
TGTACAAGTTTGTCCAGTAT+AGG 0.489895 1_4:+60024756 None:intergenic
AGGCGTATGCAGACGCAGTC+AGG 0.490139 1_4:-60032710 Msa0174370:CDS
AAACGTGTATTTATATCAGC+AGG 0.492562 1_4:+60024655 None:intergenic
TCTAACACTACCACCAGAAA+AGG 0.496688 1_4:+60026357 None:intergenic
GAACACCGAGTAAATCTTCT+GGG 0.497513 1_4:+60028485 None:intergenic
AATGAATAACCTCAAGAGAA+TGG 0.498087 1_4:+60027493 None:intergenic
AACACAACAGAGTTCAAAAT+GGG 0.498706 1_4:-60033935 Msa0174370:exon
ATGGAAACTGGATAGTTTCA+GGG 0.502033 1_4:-60024457 Msa0174370:three_prime_UTR
TGTAGAAAATTCCGGTCAGC+TGG 0.506209 1_4:-60026295 Msa0174370:CDS
GGATGAAAAGTAACATTTCA+GGG 0.506373 1_4:-60033309 Msa0174370:CDS
GACTAATCATTACATATTCA+GGG 0.507346 1_4:+60024417 None:intergenic
CACTTCTCTATTTGACAAAA+GGG 0.511687 1_4:-60033067 Msa0174370:CDS
AGAATGTTCATGTATTGATC+GGG 0.516406 1_4:+60033758 None:intergenic
AGCAAAGTTGGCTAAAACCA+AGG 0.519616 1_4:-60024733 Msa0174370:CDS
TTCAACTATTTCCCTTATAG+GGG 0.520741 1_4:+60025021 None:intergenic
ATATGGAGATTCATCATTCA+AGG 0.525968 1_4:-60032542 Msa0174370:CDS
ACAAACATGTGCACTTCTCT+CGG 0.527354 1_4:+60025714 None:intergenic
GCTCACCTGAATGTCTGTAA+TGG 0.528279 1_4:+60029568 None:intergenic
ATTTCTCCCGGAACAAATGC+AGG 0.529783 1_4:+60026319 None:intergenic
AGGGGAAGTGATCGCAGAGT+TGG 0.530506 1_4:+60033823 None:intergenic
GGAAGTGATCGCAGAGTTGG+AGG 0.530551 1_4:+60033826 None:intergenic
GTTTATAAATCGAATTTGGA+AGG 0.532058 1_4:-60033648 Msa0174370:CDS
GATATTTACAGGAGTTGTCT+GGG 0.534454 1_4:-60027565 Msa0174370:intron
GATATATGTTACAAGTTACA+AGG 0.537032 1_4:+60024510 None:intergenic
GAGAAGATGCTGAAGGAGAA+AGG 0.538349 1_4:+60029516 None:intergenic
GTGTCTTGATCCAATTCCAT+TGG 0.539009 1_4:-60024784 Msa0174370:CDS
AACTGGATATCCAGTTCCTA+AGG 0.540797 1_4:-60025045 Msa0174370:CDS
GGGTAGGTCAAATACTCAAA+GGG 0.544064 1_4:-60025353 Msa0174370:CDS
ACCCAACTTCTCCTCCCGCA+AGG 0.545104 1_4:+60025372 None:intergenic
GCCAGCACTAGGACAAGGCC+AGG 0.546060 1_4:+60026556 None:intergenic
TTCGATTAAAAGTTTGGAGA+CGG 0.551357 1_4:+60025086 None:intergenic
GAAAAGTAACATTTCAGGGA+TGG 0.551848 1_4:-60033305 Msa0174370:CDS
TATTTCTTCCTGAAAATAGG+AGG 0.552504 1_4:+60026638 None:intergenic
CTTGAAAGCATACCAGGTGC+AGG 0.556507 1_4:+60026263 None:intergenic
GAGTTATTGTGAACATTGAG+AGG 0.561223 1_4:+60024308 None:intergenic
TCCAGTATAGGAGGCTCCAA+TGG 0.562674 1_4:+60024768 None:intergenic
AAGGTATACGTAAGCACCGC+AGG 0.565472 1_4:-60025435 Msa0174370:CDS
TGGGTAGGTCAAATACTCAA+AGG 0.566001 1_4:-60025354 Msa0174370:CDS
TCTCTCTAACCATTCTCTTG+AGG 0.566962 1_4:-60027502 Msa0174370:intron
TTTCACTTATCCTGAAGAAG+AGG 0.570507 1_4:-60025856 Msa0174370:CDS
TCCTTCAGCATCTTCTCACA+AGG 0.574342 1_4:-60029510 Msa0174370:intron
ATCTTTCGTAGAATTAGTGA+TGG 0.575664 1_4:-60024582 Msa0174370:three_prime_UTR
ACAAGTTTGTCCAGTATAGG+AGG 0.576530 1_4:+60024759 None:intergenic
TATGATCTTCCTGATAGACT+TGG 0.583092 1_4:-60032750 Msa0174370:CDS
CAATAAGTTCATCAGCGCTA+CGG 0.585400 1_4:-60033544 Msa0174370:CDS
CAGGATAAGTGAAATCCTCT+GGG 0.586086 1_4:+60025865 None:intergenic
GGTTGACTTCTTGCTTGATG+AGG 0.587881 1_4:-60024987 Msa0174370:CDS
GCAGAGTTGGAGGAATTGGA+AGG 0.588452 1_4:+60033836 None:intergenic
CCCAACTTCTCCTCCCGCAA+GGG 0.588561 1_4:+60025373 None:intergenic
GTGTATTTATATCAGCAGGT+CGG 0.606462 1_4:+60024659 None:intergenic
CATCAAGAAGCAATCCCTTG+CGG 0.609700 1_4:-60025387 Msa0174370:CDS
ACCATGTACTTGAATAGCTG+AGG 0.613701 1_4:+60026612 None:intergenic
AGATAATGTCTGTTCAGTCA+AGG 0.615990 1_4:-60033104 Msa0174370:CDS
GCGCTACGGATACTATAAAG+AGG 0.616730 1_4:-60033530 Msa0174370:intron
TGGGAGAAACAGTGTTGCTG+TGG 0.618738 1_4:-60024963 Msa0174370:intron
ACTAACATAATGCACAATCA+GGG 0.618843 1_4:+60024357 None:intergenic
TGGCAAGTGCATCAAGTCAG+AGG 0.622529 1_4:-60032730 Msa0174370:CDS
TATGGAACAGCTTCTCGACA+AGG 0.628435 1_4:-60033275 Msa0174370:intron
TTTATATCAGCAGGTCGGGA+AGG 0.628685 1_4:+60024664 None:intergenic
GGTCAAATACTCAAAGGGCA+AGG 0.632029 1_4:-60025348 Msa0174370:CDS
CAGAGTTGGAGGAATTGGAA+GGG 0.634974 1_4:+60033837 None:intergenic
TTCCGTTACTATCAGTCCTG+CGG 0.636795 1_4:+60025419 None:intergenic
CGGAGGAGTACGTGAAGACA+CGG 0.637187 1_4:-60028513 Msa0174370:CDS
AACCATTGTTTATTTCCTCG+GGG 0.639761 1_4:+60029546 None:intergenic
AGTACAAAAGCAGTTCTGCA+AGG 0.651701 1_4:-60026939 Msa0174370:CDS
TGGAAACTGGATAGTTTCAG+GGG 0.653535 1_4:-60024456 Msa0174370:three_prime_UTR
AAAGATGACGAATACAACAA+AGG 0.655081 1_4:+60024599 None:intergenic
ATTCACCCAGAAGATTTACT+CGG 0.660202 1_4:-60028490 Msa0174370:CDS
AGCAACTCATGAATTTATGG+AGG 0.667015 1_4:-60028716 Msa0174370:CDS
AAGAAGCAATCCCTTGCGGG+AGG 0.667453 1_4:-60025383 Msa0174370:CDS
GAAATATCACTAGAAGAGCA+CGG 0.674119 1_4:+60028689 None:intergenic
CACCGCAGGACTGATAGTAA+CGG 0.677495 1_4:-60025421 Msa0174370:CDS
ATCAATACAAGTGAGAGCAG+AGG 0.680679 1_4:-60030335 Msa0174370:CDS
AGCCCCGAGGAAATAAACAA+TGG 0.694626 1_4:-60029548 Msa0174370:CDS
AATAGTTGAAGATGAAGCTG+CGG 0.696631 1_4:-60025008 Msa0174370:CDS
TGCGGGAGGAGAAGTTGGGT+AGG 0.698188 1_4:-60025369 Msa0174370:CDS
TTGATCGGGATCGAATTCAG+AGG 0.698708 1_4:+60033772 None:intergenic
AGCATATTGAGAAACTGCAT+AGG 0.699757 1_4:-60033044 Msa0174370:CDS
ATCGAGAGAAGCGTATTTAG+GGG 0.703352 1_4:+60033805 None:intergenic
ATTGTGCCAGCACTAGGACA+AGG 0.706373 1_4:+60026551 None:intergenic
ACAAAAGCAGTTCTGCAAGG+AGG 0.709324 1_4:-60026936 Msa0174370:CDS
CGGTGCTTACGTATACCTTG+AGG 0.713106 1_4:+60025439 None:intergenic
ACCTTGTGAGAAGATGCTGA+AGG 0.717212 1_4:+60029509 None:intergenic
AGACATTCAGGTGAGCCCCG+AGG 0.746995 1_4:-60029561 Msa0174370:CDS
TGATTGTCGCTACTGCAGAG+CGG 0.754543 1_4:-60024806 Msa0174370:CDS
ACATAAATATGAGAACCCAG+AGG 0.800648 1_4:-60025880 Msa0174370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr1_4:60026303-60026322 Msa0174370:CDS 0.0%
!! ATATATATATATATATATAT+GGG - chr1_4:60026302-60026321 Msa0174370:CDS 0.0%
!! TATATATATATATATATATA+GGG + chr1_4:60026303-60026322 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr1_4:60026302-60026321 None:intergenic 0.0%
!! TAATTAATTGATTATTATGA+AGG - chr1_4:60024746-60024765 Msa0174370:CDS 10.0%
!! ATTACATTTCAAATAATTAT+CGG - chr1_4:60024973-60024992 Msa0174370:CDS 10.0%
!!! TACTGTTTTTTATTTATTTA+TGG - chr1_4:60028141-60028160 Msa0174370:intron 10.0%
!!! ATCTTTCAAATTTTTTAAAA+GGG + chr1_4:60028622-60028641 None:intergenic 10.0%
!!! AATCTTTCAAATTTTTTAAA+AGG + chr1_4:60028623-60028642 None:intergenic 10.0%
!!! AAAATATATTTTCTAACAAT+AGG + chr1_4:60031002-60031021 None:intergenic 10.0%
!!! TATTTGATTTTTATATTCTT+TGG - chr1_4:60033580-60033599 Msa0174370:CDS 10.0%
!!! ATTTGATTTTTATATTCTTT+GGG - chr1_4:60033581-60033600 Msa0174370:CDS 10.0%
!! AAAATAAGTGAAATGAAAAA+AGG - chr1_4:60025243-60025262 Msa0174370:intron 15.0%
!!! AACCATTAATTTTAATTCTA+GGG + chr1_4:60026699-60026718 None:intergenic 15.0%
!! ATTATAGATATTATGAAAGA+CGG + chr1_4:60026875-60026894 None:intergenic 15.0%
!!! AATAGTTAGTTTATTATCAT+TGG - chr1_4:60028000-60028019 Msa0174370:intron 15.0%
!! ATGGGAATATTTATAATTAT+AGG - chr1_4:60029527-60029546 Msa0174370:CDS 15.0%
!! AAAATATTAACTAAAGTCTT+AGG + chr1_4:60030182-60030201 None:intergenic 15.0%
!! AATCTAAATCAATTTCTTAT+AGG - chr1_4:60030220-60030239 Msa0174370:intron 15.0%
!! TATATTTGAATGATATTTAC+AGG - chr1_4:60030840-60030859 Msa0174370:intron 15.0%
!! AGGTTTAATTCATTATTAAA+TGG - chr1_4:60032285-60032304 Msa0174370:intron 15.0%
!! GGTTTAATTCATTATTAAAT+GGG - chr1_4:60032286-60032305 Msa0174370:intron 15.0%
!!! TATTTATTTTATACAGCATA+AGG - chr1_4:60032677-60032696 Msa0174370:intron 15.0%
!! GTGATTTAAATATAAACAAT+TGG - chr1_4:60033213-60033232 Msa0174370:intron 15.0%
!!! AATCTCTTCATAAAATTTTT+TGG - chr1_4:60033719-60033738 Msa0174370:intron 15.0%
!!! ATCTCTTCATAAAATTTTTT+GGG - chr1_4:60033720-60033739 Msa0174370:intron 15.0%
!!! TATTATTTTTTTAGACAGTA+TGG - chr1_4:60033940-60033959 Msa0174370:five_prime_UTR 15.0%
!!! TATTTTTTGTGATGTGAAAA+TGG + chr1_4:60024332-60024351 None:intergenic 20.0%
!! AAATGAAAAAAGGAAGATAA+GGG - chr1_4:60025253-60025272 Msa0174370:intron 20.0%
!!! AGAATAAGTTTTTCATTGTT+AGG + chr1_4:60025515-60025534 None:intergenic 20.0%
!!! AAAAACTTATTCTTTTAGTG+TGG - chr1_4:60025522-60025541 Msa0174370:intron 20.0%
!! ATTGAATTAGAAACCATATA+AGG + chr1_4:60025772-60025791 None:intergenic 20.0%
!! TAATGTAATAAAAAACTTGC+AGG - chr1_4:60025928-60025947 Msa0174370:intron 20.0%
!! AATATAGCCAAATAATAACT+TGG + chr1_4:60026040-60026059 None:intergenic 20.0%
!! TAACTAAATAAGATAGCATA+TGG + chr1_4:60026129-60026148 None:intergenic 20.0%
!! AAAACACTAGCATAAAATAT+AGG - chr1_4:60026253-60026272 Msa0174370:intron 20.0%
!! AAACACTAGCATAAAATATA+GGG - chr1_4:60026254-60026273 Msa0174370:intron 20.0%
!!! CAACCATTAATTTTAATTCT+AGG + chr1_4:60026700-60026719 None:intergenic 20.0%
!!! AGGGAATTATTTTTTTTGAA+TGG - chr1_4:60026974-60026993 Msa0174370:CDS 20.0%
!! TGAATTGAATTACATGAATT+GGG + chr1_4:60027145-60027164 None:intergenic 20.0%
!! TTGAATTGAATTACATGAAT+TGG + chr1_4:60027146-60027165 None:intergenic 20.0%
!! AAAACATTATGTTTGTGTAT+TGG + chr1_4:60027217-60027236 None:intergenic 20.0%
!!! TCTTAGTATTCTTTTTGTAT+GGG + chr1_4:60027534-60027553 None:intergenic 20.0%
!!! TTTTGGGATTATTTCTATAA+GGG + chr1_4:60027587-60027606 None:intergenic 20.0%
!!! ATTTTGGGATTATTTCTATA+AGG + chr1_4:60027588-60027607 None:intergenic 20.0%
!! CTTTACATTTCAATGAATAA+AGG - chr1_4:60027652-60027671 Msa0174370:intron 20.0%
!!! TTTTTAATTGGGCATTATTA+AGG - chr1_4:60027850-60027869 Msa0174370:intron 20.0%
!!! TTTTAATTGGGCATTATTAA+GGG - chr1_4:60027851-60027870 Msa0174370:intron 20.0%
!! AAATAAAAAACAGTACAAAC+CGG + chr1_4:60028136-60028155 None:intergenic 20.0%
!!! TTCAAATTTTTTAAAAGGGT+AGG + chr1_4:60028618-60028637 None:intergenic 20.0%
!!! TTAGTATTTTTATCTACCAT+AGG - chr1_4:60029800-60029819 Msa0174370:intron 20.0%
!!! AATTAAATTATCTTTTGTCC+AGG + chr1_4:60030639-60030658 None:intergenic 20.0%
!! TTCTTTGATAGATTTATTCA+TGG - chr1_4:60030707-60030726 Msa0174370:intron 20.0%
!! TCTTTGATAGATTTATTCAT+GGG - chr1_4:60030708-60030727 Msa0174370:intron 20.0%
!! TTATAAGTTCAAGGAAAAAA+TGG + chr1_4:60030760-60030779 None:intergenic 20.0%
!!! ATATATTTTCTAACAATAGG+AGG + chr1_4:60030999-60031018 None:intergenic 20.0%
!!! AATTATTTCTTCCTGAAAAT+AGG + chr1_4:60031784-60031803 None:intergenic 20.0%
!! ATAAAAATCAAATAGCCATT+AGG + chr1_4:60033574-60033593 None:intergenic 20.0%
!!! TTGAAATTTTGATACAATGA+AGG + chr1_4:60034033-60034052 None:intergenic 20.0%
!!! TAAACTGGTTTTTGAGATTT+GGG + chr1_4:60024405-60024424 None:intergenic 25.0%
! GAAGGTTTATAAATCGAATT+TGG - chr1_4:60024764-60024783 Msa0174370:CDS 25.0%
! GTTTATAAATCGAATTTGGA+AGG - chr1_4:60024768-60024787 Msa0174370:CDS 25.0%
! TAACTGTAGCATTAGATTTA+TGG - chr1_4:60025164-60025183 Msa0174370:intron 25.0%
! GAAATGAAAAAAGGAAGATA+AGG - chr1_4:60025252-60025271 Msa0174370:intron 25.0%
! TAGAAAGATTATTCAACACA+GGG + chr1_4:60025549-60025568 None:intergenic 25.0%
! GAAAAAGCAACCTTAAAAAT+CGG + chr1_4:60025750-60025769 None:intergenic 25.0%
! CGTGTAAAAGTAATAATCAA+AGG + chr1_4:60025795-60025814 None:intergenic 25.0%
!! TTATCATGCTCTTTAGAAAT+GGG - chr1_4:60025966-60025985 Msa0174370:intron 25.0%
! TTAGCTTCCAAGTTATTATT+TGG - chr1_4:60026030-60026049 Msa0174370:intron 25.0%
! ATAAAAGACACCTTCATAAA+AGG - chr1_4:60026526-60026545 Msa0174370:CDS 25.0%
! AGCCCTAGAATTAAAATTAA+TGG - chr1_4:60026694-60026713 Msa0174370:CDS 25.0%
! ATTACATGTTCATCTACATA+AGG - chr1_4:60026954-60026973 Msa0174370:CDS 25.0%
! TTACATGTTCATCTACATAA+GGG - chr1_4:60026955-60026974 Msa0174370:CDS 25.0%
!!! GAATTTTTTACATGTTTTGC+AGG + chr1_4:60027123-60027142 None:intergenic 25.0%
!!! ATTTGAGATTTTAATGCTCA+AGG - chr1_4:60027261-60027280 Msa0174370:intron 25.0%
! GTATGGGTCATATATATATA+GGG + chr1_4:60027518-60027537 None:intergenic 25.0%
! TGTATGGGTCATATATATAT+AGG + chr1_4:60027519-60027538 None:intergenic 25.0%
!! GTCTTAGTATTCTTTTTGTA+TGG + chr1_4:60027535-60027554 None:intergenic 25.0%
! AAAGAATACTAAGACTAAGA+AGG - chr1_4:60027540-60027559 Msa0174370:CDS 25.0%
! TTTAATTGGGCATTATTAAG+GGG - chr1_4:60027852-60027871 Msa0174370:intron 25.0%
!!! AAGAAGTATTTCACATCATA+AGG + chr1_4:60028224-60028243 None:intergenic 25.0%
! ATTCTCTTCTCTCTATTAAA+AGG + chr1_4:60028290-60028309 None:intergenic 25.0%
!!! AGAATGAACATTGTTTCTTT+TGG - chr1_4:60028305-60028324 Msa0174370:intron 25.0%
!!! GAATGAACATTGTTTCTTTT+GGG - chr1_4:60028306-60028325 Msa0174370:intron 25.0%
! GAACTTAAAAATTGTATTGG+AGG - chr1_4:60028472-60028491 Msa0174370:intron 25.0%
! TTAAAAATTGTATTGGAGGA+GGG - chr1_4:60028476-60028495 Msa0174370:intron 25.0%
!! TTATTTTCTTTTTTCCTGAG+AGG - chr1_4:60028761-60028780 Msa0174370:intron 25.0%
! ACATCATTTCTGTTGAAATT+TGG - chr1_4:60029024-60029043 Msa0174370:intron 25.0%
! CATCATTTCTGTTGAAATTT+GGG - chr1_4:60029025-60029044 Msa0174370:intron 25.0%
! ATCATTTCTGTTGAAATTTG+GGG - chr1_4:60029026-60029045 Msa0174370:intron 25.0%
!! GTGTAAAAAGAAAGGAATTT+TGG + chr1_4:60029579-60029598 None:intergenic 25.0%
! TAAGTTACGTGTAAAAAGAA+AGG + chr1_4:60029587-60029606 None:intergenic 25.0%
! TAAAAAATCTGTACTAGTGA+AGG + chr1_4:60029615-60029634 None:intergenic 25.0%
! GGTAGATAAAAATACTAACT+TGG + chr1_4:60029798-60029817 None:intergenic 25.0%
! TTTACCAGCAATAGATAAAA+TGG + chr1_4:60029829-60029848 None:intergenic 25.0%
! GCATATTATATAACAGACAT+AGG + chr1_4:60030083-60030102 None:intergenic 25.0%
!!! CTTTTTGTCCAATTTAACTT+TGG - chr1_4:60030132-60030151 Msa0174370:intron 25.0%
! GTATATAACAGCAATAAATG+GGG + chr1_4:60030421-60030440 None:intergenic 25.0%
! CGTATATAACAGCAATAAAT+GGG + chr1_4:60030422-60030441 None:intergenic 25.0%
! TAAAATCAAATTTCCTTCTG+TGG - chr1_4:60030805-60030824 Msa0174370:intron 25.0%
! TTAAAGCTAAAAGCAAATAC+TGG + chr1_4:60031137-60031156 None:intergenic 25.0%
!! AACATTTTGTAATTCTCCTA+TGG + chr1_4:60031184-60031203 None:intergenic 25.0%
! GAATTACAAAATGTTGAAAC+TGG - chr1_4:60031189-60031208 Msa0174370:intron 25.0%
!! TCAATAGCATTTTGTGATTT+CGG + chr1_4:60031267-60031286 None:intergenic 25.0%
!!! AGTCATCATCTAAAATTTTG+CGG + chr1_4:60031670-60031689 None:intergenic 25.0%
!! AAAATTTTAGATGATGACTC+TGG - chr1_4:60031671-60031690 Msa0174370:intron 25.0%
!! AAATTTTAGATGATGACTCT+GGG - chr1_4:60031672-60031691 Msa0174370:intron 25.0%
!! AAGAGAGTTATTTGTTGATT+TGG - chr1_4:60031709-60031728 Msa0174370:intron 25.0%
!! AGTTCATATTTTCCTTTCAA+TGG - chr1_4:60032174-60032193 Msa0174370:intron 25.0%
!! TTTCTATTGACTATGAACTT+CGG + chr1_4:60032256-60032275 None:intergenic 25.0%
! AAGTTCATAGTCAATAGAAA+TGG - chr1_4:60032256-60032275 Msa0174370:intron 25.0%
! GTCAATAGAAATGGAAATAA+AGG - chr1_4:60032265-60032284 Msa0174370:intron 25.0%
! ATTATTAAATGGGTAGTGAA+AGG - chr1_4:60032296-60032315 Msa0174370:intron 25.0%
!!! TTTTAAGAAGAGCATATAAC+AGG + chr1_4:60032615-60032634 None:intergenic 25.0%
!!! TGTTGATTTTTTTCTTCAAG+AGG - chr1_4:60032722-60032741 Msa0174370:CDS 25.0%
! ATTAATGAAAGAAAACAGAG+CGG + chr1_4:60032774-60032793 None:intergenic 25.0%
! TGAAATTGAAATACAATGCA+CGG - chr1_4:60032820-60032839 Msa0174370:intron 25.0%
! GATATTTAATTGCTGTAAAC+TGG - chr1_4:60032883-60032902 Msa0174370:intron 25.0%
! CACAAAAATAGAATATACAC+AGG - chr1_4:60033147-60033166 Msa0174370:intron 25.0%
! AGAACATAAAAAAAGAGCTA+AGG - chr1_4:60033791-60033810 Msa0174370:CDS 25.0%
! GATATATGTTACAAGTTACA+AGG + chr1_4:60033909-60033928 None:intergenic 25.0%
! GACTAATCATTACATATTCA+GGG + chr1_4:60034002-60034021 None:intergenic 25.0%
! TGACTAATCATTACATATTC+AGG + chr1_4:60034003-60034022 None:intergenic 25.0%
!!! AAACTGGTTTTTGAGATTTG+GGG + chr1_4:60024404-60024423 None:intergenic 30.0%
!!! CTAAACTGGTTTTTGAGATT+TGG + chr1_4:60024406-60024425 None:intergenic 30.0%
! TGAAGAATTTGAAGCTAAAC+TGG + chr1_4:60024420-60024439 None:intergenic 30.0%
AACACAACAGAGTTCAAAAT+GGG - chr1_4:60024481-60024500 Msa0174370:three_prime_UTR 30.0%
TACATCAGATGAAGTACAAT+TGG - chr1_4:60024504-60024523 Msa0174370:three_prime_UTR 30.0%
! AGAATGTTCATGTATTGATC+GGG + chr1_4:60024661-60024680 None:intergenic 30.0%
! CAGAATGTTCATGTATTGAT+CGG + chr1_4:60024662-60024681 None:intergenic 30.0%
CAAGAGAAAAATAGCTATGA+AGG + chr1_4:60025032-60025051 None:intergenic 30.0%
TCAACAAAACCCAAATACAA+CGG + chr1_4:60025084-60025103 None:intergenic 30.0%
AGGATGAAAAGTAACATTTC+AGG - chr1_4:60025106-60025125 Msa0174370:CDS 30.0%
GGATGAAAAGTAACATTTCA+GGG - chr1_4:60025107-60025126 Msa0174370:CDS 30.0%
AGATAAGGGTTGAATTTGAT+AGG - chr1_4:60025267-60025286 Msa0174370:intron 30.0%
ACACTTCTCTATTTGACAAA+AGG - chr1_4:60025348-60025367 Msa0174370:CDS 30.0%
CACTTCTCTATTTGACAAAA+GGG - chr1_4:60025349-60025368 Msa0174370:CDS 30.0%
ACATACAATGAACAATGACA+TGG + chr1_4:60025441-60025460 None:intergenic 30.0%
ATATTAAATGCGATGCAAGT+TGG - chr1_4:60025473-60025492 Msa0174370:CDS 30.0%
AGAAAGATTATTCAACACAG+GGG + chr1_4:60025548-60025567 None:intergenic 30.0%
GTAGAAAGATTATTCAACAC+AGG + chr1_4:60025550-60025569 None:intergenic 30.0%
! TCACAGAAACACTTGTTAAA+AGG + chr1_4:60025598-60025617 None:intergenic 30.0%
TATAAACTACTCTTCGACAA+GGG + chr1_4:60025646-60025665 None:intergenic 30.0%
ATATAAACTACTCTTCGACA+AGG + chr1_4:60025647-60025666 None:intergenic 30.0%
!!! AAGGTTGCTTTTTCCTTATA+TGG - chr1_4:60025756-60025775 Msa0174370:intron 30.0%
ATATGGAGATTCATCATTCA+AGG - chr1_4:60025874-60025893 Msa0174370:CDS 30.0%
! CTTATCATGCTCTTTAGAAA+TGG - chr1_4:60025965-60025984 Msa0174370:intron 30.0%
TAAATAATCCATATTTCCCC+TGG + chr1_4:60026013-60026032 None:intergenic 30.0%
! TTATAAGTTTTGCCCATGTT+GGG + chr1_4:60026195-60026214 None:intergenic 30.0%
! TTTATAAGTTTTGCCCATGT+TGG + chr1_4:60026196-60026215 None:intergenic 30.0%
! TTTTAACAAGTCACACCTTA+AGG - chr1_4:60026411-60026430 Msa0174370:intron 30.0%
AAAGTGAAAATCACACCTTA+AGG + chr1_4:60026429-60026448 None:intergenic 30.0%
ACACCTTCATAAAAGTAAGT+TGG - chr1_4:60026471-60026490 Msa0174370:intron 30.0%
!! ACACCAACTTACTTTTATGA+AGG + chr1_4:60026477-60026496 None:intergenic 30.0%
! ATAGAAGACACCTTTTATGA+AGG + chr1_4:60026539-60026558 None:intergenic 30.0%
ATAGATATTATGAAAGACGG+TGG + chr1_4:60026872-60026891 None:intergenic 30.0%
AATCTCAAATCAAAGACCAA+CGG + chr1_4:60027251-60027270 None:intergenic 30.0%
AACCATGATTGTAGAAGATA+AGG - chr1_4:60027305-60027324 Msa0174370:intron 30.0%
TCAACCATGAATTTATTCCA+AGG - chr1_4:60027435-60027454 Msa0174370:intron 30.0%
CAACCATGAATTTATTCCAA+GGG - chr1_4:60027436-60027455 Msa0174370:intron 30.0%
!!! TTTTTTCTTCTCTCTAACCA+GGG - chr1_4:60028037-60028056 Msa0174370:intron 30.0%
! CTTCTTTTTATTGCTCTGTA+TGG - chr1_4:60028238-60028257 Msa0174370:intron 30.0%
TCTTCTCTCTATTAAAAGGA+GGG + chr1_4:60028286-60028305 None:intergenic 30.0%
TGGAAGAAATAGAGGAAAAT+GGG - chr1_4:60028390-60028409 Msa0174370:intron 30.0%
GGGGAACTTAAAAATTGTAT+TGG - chr1_4:60028469-60028488 Msa0174370:intron 30.0%
CTTAAAAATTGTATTGGAGG+AGG - chr1_4:60028475-60028494 Msa0174370:intron 30.0%
GAACTAAATCAATAACACCA+AGG + chr1_4:60028718-60028737 None:intergenic 30.0%
! AGAGGAAGTTTTCTATTTGT+TGG - chr1_4:60028779-60028798 Msa0174370:intron 30.0%
TGAACCATTGTTTATTTCCT+CGG + chr1_4:60028875-60028894 None:intergenic 30.0%
! TTTGCTGTCAACATCTTAAA+GGG + chr1_4:60028980-60028999 None:intergenic 30.0%
CTTGAGAAGAGTTTATAAAG+AGG + chr1_4:60029097-60029116 None:intergenic 30.0%
TCCAACAATTTCAATCAAGA+TGG - chr1_4:60029252-60029271 Msa0174370:intron 30.0%
ACCATCTTGATTGAAATTGT+TGG + chr1_4:60029256-60029275 None:intergenic 30.0%
TGATTCTGTGAAGTAATGTA+CGG - chr1_4:60029278-60029297 Msa0174370:intron 30.0%
TCTCTTCCATTTCCTATTAT+AGG - chr1_4:60029676-60029695 Msa0174370:intron 30.0%
! GATCAAATTTGCTCAAGATT+TGG - chr1_4:60029769-60029788 Msa0174370:intron 30.0%
ATAGATAAAATGGCTTCCTA+TGG + chr1_4:60029819-60029838 None:intergenic 30.0%
!!! TTACTTTTTCAATGTTTGCC+AGG - chr1_4:60029867-60029886 Msa0174370:intron 30.0%
AAGATCTGCCAAAGTTAAAT+TGG + chr1_4:60030143-60030162 None:intergenic 30.0%
AAAGACAAGCAAAAACCAAA+TGG + chr1_4:60030314-60030333 None:intergenic 30.0%
GCGTATATAACAGCAATAAA+TGG + chr1_4:60030423-60030442 None:intergenic 30.0%
AAATCCCAGTTTAGCATAAA+TGG + chr1_4:60030447-60030466 None:intergenic 30.0%
! ACACTTCCTTTTAAACATCT+TGG - chr1_4:60030550-60030569 Msa0174370:intron 30.0%
TTGTTGCCAAGATGTTTAAA+AGG + chr1_4:60030559-60030578 None:intergenic 30.0%
TATTTCAACTGTATCAGACA+GGG + chr1_4:60030664-60030683 None:intergenic 30.0%
ATATTTCAACTGTATCAGAC+AGG + chr1_4:60030665-60030684 None:intergenic 30.0%
CAACAAGAGTTATAAGTTCA+AGG + chr1_4:60030769-60030788 None:intergenic 30.0%
AATGAATAACCTCAAGAGAA+TGG + chr1_4:60030926-60030945 None:intergenic 30.0%
GAATTTGAAAACTACAGCTA+AGG + chr1_4:60030977-60030996 None:intergenic 30.0%
TTCATCCTCTGAATATTTGT+AGG - chr1_4:60031020-60031039 Msa0174370:intron 30.0%
AAATGTTGAAACTGGAAAAC+TGG - chr1_4:60031197-60031216 Msa0174370:intron 30.0%
AATGTTGAAACTGGAAAACT+GGG - chr1_4:60031198-60031217 Msa0174370:intron 30.0%
TGATTTCTCTTGGAAAAATC+TGG - chr1_4:60031332-60031351 Msa0174370:intron 30.0%
TTTCTTACAAGTCCTGAAAA+AGG - chr1_4:60031413-60031432 Msa0174370:intron 30.0%
!! TTTGTTGATTTGGTTCAAGA+AGG - chr1_4:60031719-60031738 Msa0174370:intron 30.0%
TATTTCTTCCTGAAAATAGG+AGG + chr1_4:60031781-60031800 None:intergenic 30.0%
! TTGGATTTGATTTCTGAAAG+TGG - chr1_4:60031952-60031971 Msa0174370:intron 30.0%
TGAAAGTGGATAAATTTGTG+TGG - chr1_4:60031966-60031985 Msa0174370:intron 30.0%
AGATTACAAGGAAACTTATG+AGG + chr1_4:60032022-60032041 None:intergenic 30.0%
TAAGTTTCCTTGTAATCTTC+AGG - chr1_4:60032024-60032043 Msa0174370:intron 30.0%
! AATTTTCTACAGATTTCTCC+CGG + chr1_4:60032112-60032131 None:intergenic 30.0%
GAGAAATCTGTAGAAAATTC+CGG - chr1_4:60032113-60032132 Msa0174370:intron 30.0%
CACAAGTGTAATTTCTCTTA+AGG - chr1_4:60032351-60032370 Msa0174370:intron 30.0%
TGCTCTTCTTAAAAACAGAT+TGG - chr1_4:60032621-60032640 Msa0174370:intron 30.0%
!!! GATTTTTTTCTTCAAGAGGT+TGG - chr1_4:60032726-60032745 Msa0174370:CDS 30.0%
ATTTAATTGCTGTAAACTGG+AGG - chr1_4:60032886-60032905 Msa0174370:intron 30.0%
CATTATGTATAACTTCAAGC+TGG + chr1_4:60032940-60032959 None:intergenic 30.0%
! CAAATTCTTGTACACTTTTC+AGG + chr1_4:60033309-60033328 None:intergenic 30.0%
TTCGATTAAAAGTTTGGAGA+CGG + chr1_4:60033333-60033352 None:intergenic 30.0%
ATCCACTTCGATTAAAAGTT+TGG + chr1_4:60033339-60033358 None:intergenic 30.0%
TTCAACTATTTCCCTTATAG+GGG + chr1_4:60033398-60033417 None:intergenic 30.0%
CTTCAACTATTTCCCTTATA+GGG + chr1_4:60033399-60033418 None:intergenic 30.0%
TCTTCAACTATTTCCCTTAT+AGG + chr1_4:60033400-60033419 None:intergenic 30.0%
! TTTTTATATTCTTTGGGCAC+AGG - chr1_4:60033587-60033606 Msa0174370:CDS 30.0%
AAACGTGTATTTATATCAGC+AGG + chr1_4:60033764-60033783 None:intergenic 30.0%
AAAGATGACGAATACAACAA+AGG + chr1_4:60033820-60033839 None:intergenic 30.0%
ATCTTTCGTAGAATTAGTGA+TGG - chr1_4:60033834-60033853 Msa0174370:CDS 30.0%
TTGGCAATTGATTGTTAACT+TGG - chr1_4:60033858-60033877 Msa0174370:CDS 30.0%
! TTTTTAGACAGTATGGAAAC+TGG - chr1_4:60033947-60033966 Msa0174370:five_prime_UTR 30.0%
ACTAACATAATGCACAATCA+GGG + chr1_4:60034062-60034081 None:intergenic 30.0%
!!! GAGAGGTTATTTTAGTTTCA+AGG + chr1_4:60034094-60034113 None:intergenic 30.0%
CAACACAACAGAGTTCAAAA+TGG - chr1_4:60024480-60024499 Msa0174370:three_prime_UTR 35.0%
CGATCAATACATGAACATTC+TGG - chr1_4:60024660-60024679 Msa0174370:three_prime_UTR 35.0%
ACTTCAACGACATGTTGAAA+TGG - chr1_4:60024794-60024813 Msa0174370:CDS 35.0%
TGTGAAAGAACCGTTGTATT+TGG - chr1_4:60025071-60025090 Msa0174370:CDS 35.0%
GTGAAAGAACCGTTGTATTT+GGG - chr1_4:60025072-60025091 Msa0174370:CDS 35.0%
!!! GTATTTGGGTTTTGTTGAAC+AGG - chr1_4:60025086-60025105 Msa0174370:CDS 35.0%
GAAAAGTAACATTTCAGGGA+TGG - chr1_4:60025111-60025130 Msa0174370:CDS 35.0%
AGATAATGTCTGTTCAGTCA+AGG - chr1_4:60025312-60025331 Msa0174370:CDS 35.0%
AGCATATTGAGAAACTGCAT+AGG - chr1_4:60025372-60025391 Msa0174370:CDS 35.0%
TAATCTTCTTCGCAAAGTTC+AGG - chr1_4:60025400-60025419 Msa0174370:CDS 35.0%
CTTGCATCGCATTTAATATG+TGG + chr1_4:60025472-60025491 None:intergenic 35.0%
!! CAAGTTGGATTTTTGCTGAA+TGG - chr1_4:60025488-60025507 Msa0174370:intron 35.0%
TATGATCTTCCTGATAGACT+TGG - chr1_4:60025666-60025685 Msa0174370:intron 35.0%
TACACGCAACATATCAATCT+AGG - chr1_4:60025809-60025828 Msa0174370:intron 35.0%
AGGTCTCAGATGAAATATCT+TGG - chr1_4:60025829-60025848 Msa0174370:intron 35.0%
GGTTATATCCTCTTTCTATC+AGG - chr1_4:60025850-60025869 Msa0174370:CDS 35.0%
TACCATGTTATGAGCTGATA+TGG + chr1_4:60026087-60026106 None:intergenic 35.0%
! GTTGGGAAAACTGGTTTATA+AGG + chr1_4:60026178-60026197 None:intergenic 35.0%
! ATAAACCAGTTTTCCCAACA+TGG - chr1_4:60026179-60026198 Msa0174370:intron 35.0%
! TAAACCAGTTTTCCCAACAT+GGG - chr1_4:60026180-60026199 Msa0174370:intron 35.0%
TGTTAAAAGACACCACCAAA+GGG + chr1_4:60026399-60026418 None:intergenic 35.0%
TTGTTAAAAGACACCACCAA+AGG + chr1_4:60026400-60026419 None:intergenic 35.0%
ATAGACTTGAACAGTTGTGA+GGG + chr1_4:60026772-60026791 None:intergenic 35.0%
TATAGACTTGAACAGTTGTG+AGG + chr1_4:60026773-60026792 None:intergenic 35.0%
TTACTGGTGGAAAGATGAAA+AGG + chr1_4:60026806-60026825 None:intergenic 35.0%
! TTTTCCATGGTGATAGTTAC+TGG + chr1_4:60026822-60026841 None:intergenic 35.0%
! CAACTTTGCATTGATGTTAC+AGG - chr1_4:60027029-60027048 Msa0174370:intron 35.0%
AATCCAACACATTGAGAGAA+GGG - chr1_4:60027164-60027183 Msa0174370:intron 35.0%
ATCTCAAATCAAAGACCAAC+GGG + chr1_4:60027250-60027269 None:intergenic 35.0%
CTCCTTATCTTCTACAATCA+TGG + chr1_4:60027310-60027329 None:intergenic 35.0%
!! GGGATTATTTCTATAAGGGT+TGG + chr1_4:60027583-60027602 None:intergenic 35.0%
!!! GACACGGTTCATCTTATTTT+GGG + chr1_4:60027603-60027622 None:intergenic 35.0%
!! AGACACGGTTCATCTTATTT+TGG + chr1_4:60027604-60027623 None:intergenic 35.0%
ACTTGTTCAATGCATGTTCA+AGG - chr1_4:60027883-60027902 Msa0174370:intron 35.0%
CTTGTTCAATGCATGTTCAA+GGG - chr1_4:60027884-60027903 Msa0174370:intron 35.0%
TTGTTCAATGCATGTTCAAG+GGG - chr1_4:60027885-60027904 Msa0174370:intron 35.0%
!!! CTTTTTTCTTCTCTCTAACC+AGG - chr1_4:60028036-60028055 Msa0174370:intron 35.0%
! TTTTTCTTCTCTCTAACCAG+GGG - chr1_4:60028038-60028057 Msa0174370:intron 35.0%
AGTATTTCACATCATAAGGC+TGG + chr1_4:60028220-60028239 None:intergenic 35.0%
!!! TTGCTCTGTATGGTTAGTTT+TGG - chr1_4:60028248-60028267 Msa0174370:intron 35.0%
!!! TGCTCTGTATGGTTAGTTTT+GGG - chr1_4:60028249-60028268 Msa0174370:intron 35.0%
CTCTTCTCTCTATTAAAAGG+AGG + chr1_4:60028287-60028306 None:intergenic 35.0%
GTGGAAGAAATAGAGGAAAA+TGG - chr1_4:60028389-60028408 Msa0174370:intron 35.0%
AAGAAATAGAGGAAAATGGG+AGG - chr1_4:60028393-60028412 Msa0174370:intron 35.0%
AGAAATAGAGGAAAATGGGA+GGG - chr1_4:60028394-60028413 Msa0174370:intron 35.0%
AATACTAAACCCTCCTCATT+TGG - chr1_4:60028447-60028466 Msa0174370:intron 35.0%
ATACTAAACCCTCCTCATTT+GGG - chr1_4:60028448-60028467 Msa0174370:intron 35.0%
!!! TTTTTAAGTTCCCCCAAATG+AGG + chr1_4:60028463-60028482 None:intergenic 35.0%
GTGGAAAATATGAGGGAAAA+TGG + chr1_4:60028649-60028668 None:intergenic 35.0%
CAAATAGAAAACTTCCTCTC+AGG + chr1_4:60028778-60028797 None:intergenic 35.0%
!! GAAGTTTTCTATTTGTTGGC+AGG - chr1_4:60028783-60028802 Msa0174370:intron 35.0%
ACAATCCATTACAGACATTC+AGG - chr1_4:60028843-60028862 Msa0174370:intron 35.0%
AACCATTGTTTATTTCCTCG+GGG + chr1_4:60028873-60028892 None:intergenic 35.0%
GAACCATTGTTTATTTCCTC+GGG + chr1_4:60028874-60028893 None:intergenic 35.0%
GAGGAAATAAACAATGGTTC+AGG - chr1_4:60028874-60028893 Msa0174370:intron 35.0%
TTGCTGTCAACATCTTAAAG+GGG + chr1_4:60028979-60028998 None:intergenic 35.0%
!! GTTTGCTGTCAACATCTTAA+AGG + chr1_4:60028981-60029000 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG + chr1_4:60029094-60029113 None:intergenic 35.0%
GGAATGACCTATCTTCTATA+AGG + chr1_4:60029348-60029367 None:intergenic 35.0%
CAAATCATCTTCTCATAGAG+TGG + chr1_4:60029369-60029388 None:intergenic 35.0%
CTCTATGAGAAGATGATTTG+TGG - chr1_4:60029369-60029388 Msa0174370:intron 35.0%
TTGTGGTTCTTAAACTGTTG+AGG - chr1_4:60029386-60029405 Msa0174370:intron 35.0%
! GAACTTGAAAATTGCTGACT+TGG - chr1_4:60029419-60029438 Msa0174370:intron 35.0%
TTGCTGCCTATAATAGGAAA+TGG + chr1_4:60029685-60029704 None:intergenic 35.0%
AGCAACTCATGAATTTATGG+AGG - chr1_4:60029700-60029719 Msa0174370:intron 35.0%
GAAATATCACTAGAAGAGCA+CGG + chr1_4:60029730-60029749 None:intergenic 35.0%
TGCTCTTCTAGTGATATTTC+CGG - chr1_4:60029730-60029749 Msa0174370:intron 35.0%
!! ATCAACTGCTTTTCTGAATC+CGG + chr1_4:60029752-60029771 None:intergenic 35.0%
!! GAAGCCATTTTATCTATTGC+TGG - chr1_4:60029822-60029841 Msa0174370:intron 35.0%
ATTCACCCAGAAGATTTACT+CGG - chr1_4:60029926-60029945 Msa0174370:intron 35.0%
!! TTTGCTACTTTCCCAATTTC+TGG - chr1_4:60029971-60029990 Msa0174370:intron 35.0%
CAAGCATATGTCCAGAAATT+GGG + chr1_4:60029985-60030004 None:intergenic 35.0%
TCAAGCATATGTCCAGAAAT+TGG + chr1_4:60029986-60030005 None:intergenic 35.0%
AGTTCCACATTAAGTAGATG+TGG - chr1_4:60030040-60030059 Msa0174370:intron 35.0%
TGCATATAATCAGGAGAACA+GGG + chr1_4:60030290-60030309 None:intergenic 35.0%
ATGCATATAATCAGGAGAAC+AGG + chr1_4:60030291-60030310 None:intergenic 35.0%
CCAAATGGATGCATATAATC+AGG + chr1_4:60030299-60030318 None:intergenic 35.0%
CCTGATTATATGCATCCATT+TGG - chr1_4:60030296-60030315 Msa0174370:intron 35.0%
!! TTGGTTTTTGCTTGTCTTTC+TGG - chr1_4:60030315-60030334 Msa0174370:CDS 35.0%
AGTTCAAGGAAAAAATGGCT+TGG + chr1_4:60030755-60030774 None:intergenic 35.0%
TGATATTTACAGGAGTTGTC+TGG - chr1_4:60030850-60030869 Msa0174370:intron 35.0%
GATATTTACAGGAGTTGTCT+GGG - chr1_4:60030851-60030870 Msa0174370:intron 35.0%
AGGTTATTCATTGATGCCAT+TGG - chr1_4:60030934-60030953 Msa0174370:intron 35.0%
CAGAATCAAATTTGAGCCAA+TGG + chr1_4:60030953-60030972 None:intergenic 35.0%
CGTAATCACATGATTTCTCT+TGG - chr1_4:60031322-60031341 Msa0174370:intron 35.0%
TTTCTCTTGGAAAAATCTGG+TGG - chr1_4:60031335-60031354 Msa0174370:intron 35.0%
TTACAAGTCCTGAAAAAGGA+TGG - chr1_4:60031417-60031436 Msa0174370:intron 35.0%
! ATTTTATCTCTCTCCCTTCA+GGG - chr1_4:60031641-60031660 Msa0174370:intron 35.0%
AGCTATTCAAGTACATGGTT+TGG - chr1_4:60031808-60031827 Msa0174370:intron 35.0%
! ATCGATGAAAAAGCTTTTCC+TGG - chr1_4:60031842-60031861 Msa0174370:intron 35.0%
ATCAAATCCAAGTCTACAAG+TGG + chr1_4:60031943-60031962 None:intergenic 35.0%
! GCTATTTCCTGAAGATTACA+AGG + chr1_4:60032034-60032053 None:intergenic 35.0%
! TATGAACTTGAAAGCATACC+AGG + chr1_4:60032162-60032181 None:intergenic 35.0%
TGAACTGCAATTCCATTGAA+AGG + chr1_4:60032189-60032208 None:intergenic 35.0%
TTAAATGGGTAGTGAAAGGA+TGG - chr1_4:60032300-60032319 Msa0174370:intron 35.0%
!! TTCCTTGAATGCTTTGGTTT+TGG - chr1_4:60032443-60032462 Msa0174370:intron 35.0%
! AACCAAAACCAAAGCATTCA+AGG + chr1_4:60032448-60032467 None:intergenic 35.0%
!!! GAATGCTTTGGTTTTGGTTT+TGG - chr1_4:60032449-60032468 Msa0174370:intron 35.0%
ACATAAATATGAGAACCCAG+AGG - chr1_4:60032536-60032555 Msa0174370:CDS 35.0%
TTTCACTTATCCTGAAGAAG+AGG - chr1_4:60032560-60032579 Msa0174370:intron 35.0%
!! GAATATACACAGGTATTGAG+TGG - chr1_4:60033157-60033176 Msa0174370:intron 35.0%
TGTCGGCAAAAATGATATGA+TGG + chr1_4:60033246-60033265 None:intergenic 35.0%
! CTCCAAACTTTTAATCGAAG+TGG - chr1_4:60033334-60033353 Msa0174370:intron 35.0%
TGGATTCCAACAAATTCAAC+TGG - chr1_4:60033354-60033373 Msa0174370:intron 35.0%
GGATATCCAGTTGAATTTGT+TGG + chr1_4:60033363-60033382 None:intergenic 35.0%
AATAGTTGAAGATGAAGCTG+CGG - chr1_4:60033408-60033427 Msa0174370:intron 35.0%
TGTACAAGTTTGTCCAGTAT+AGG + chr1_4:60033663-60033682 None:intergenic 35.0%
CAAACTTGTACAAGCAAAGT+TGG - chr1_4:60033671-60033690 Msa0174370:intron 35.0%
!! GATTGTTGTGTTTTGTTCCT+TGG + chr1_4:60033703-60033722 None:intergenic 35.0%
TGTATTTATATCAGCAGGTC+GGG + chr1_4:60033759-60033778 None:intergenic 35.0%
GTGTATTTATATCAGCAGGT+CGG + chr1_4:60033760-60033779 None:intergenic 35.0%
TCGTAGAATTAGTGATGGTT+TGG - chr1_4:60033839-60033858 Msa0174370:CDS 35.0%
TATGGAAACTGGATAGTTTC+AGG - chr1_4:60033958-60033977 Msa0174370:five_prime_UTR 35.0%
ATGGAAACTGGATAGTTTCA+GGG - chr1_4:60033959-60033978 Msa0174370:five_prime_UTR 35.0%
GACTAACATAATGCACAATC+AGG + chr1_4:60034063-60034082 None:intergenic 35.0%
! ATCGAGAGAAGCGTATTTAG+GGG + chr1_4:60024614-60024633 None:intergenic 40.0%
! CATCGAGAGAAGCGTATTTA+GGG + chr1_4:60024615-60024634 None:intergenic 40.0%
! TCATCGAGAGAAGCGTATTT+AGG + chr1_4:60024616-60024635 None:intergenic 40.0%
CAATAAGTTCATCAGCGCTA+CGG - chr1_4:60024872-60024891 Msa0174370:intron 40.0%
ACACCTTCGATCAGAAATGT+CGG + chr1_4:60024922-60024941 None:intergenic 40.0%
TTCAGGGATGGAGACTAATA+TGG - chr1_4:60025123-60025142 Msa0174370:CDS 40.0%
CTTAAAAATCGGCATTGCTC+CGG + chr1_4:60025739-60025758 None:intergenic 40.0%
TCCTCTTTCTATCAGGCATA+TGG - chr1_4:60025857-60025876 Msa0174370:CDS 40.0%
TCCATATGCCTGATAGAAAG+AGG + chr1_4:60025861-60025880 None:intergenic 40.0%
ATCAGTCAACATTTCAAGCC+AGG - chr1_4:60025992-60026011 Msa0174370:intron 40.0%
TCAGTCAACATTTCAAGCCA+GGG - chr1_4:60025993-60026012 Msa0174370:intron 40.0%
ATTTCAAGCCAGGGGAAATA+TGG - chr1_4:60026002-60026021 Msa0174370:intron 40.0%
AGCCATATCAGCTCATAACA+TGG - chr1_4:60026082-60026101 Msa0174370:intron 40.0%
ATAACATGGTATGAGACCCT+TGG - chr1_4:60026096-60026115 Msa0174370:intron 40.0%
! TTTTGTTACAAGCCACCCTT+TGG - chr1_4:60026381-60026400 Msa0174370:intron 40.0%
TAGACTTGAACAGTTGTGAG+GGG + chr1_4:60026771-60026790 None:intergenic 40.0%
!! GTGCTTGTTGGTATTTTCCA+TGG + chr1_4:60026835-60026854 None:intergenic 40.0%
TATTATGAAAGACGGTGGCA+TGG + chr1_4:60026867-60026886 None:intergenic 40.0%
! GCATTGATGTTACAGGTACA+AGG - chr1_4:60027036-60027055 Msa0174370:intron 40.0%
! GTTTTGCAGGTTTCGATTAC+AGG + chr1_4:60027110-60027129 None:intergenic 40.0%
CAATCCAACACATTGAGAGA+AGG - chr1_4:60027163-60027182 Msa0174370:intron 40.0%
ATCCAACACATTGAGAGAAG+GGG - chr1_4:60027165-60027184 Msa0174370:intron 40.0%
!!! GTTTTTTACAGCAAACCCGT+TGG - chr1_4:60027232-60027251 Msa0174370:intron 40.0%
CAGCCCTTGGAATAAATTCA+TGG + chr1_4:60027442-60027461 None:intergenic 40.0%
ATTCTTATGCGAGAGTGAGA+GGG + chr1_4:60027473-60027492 None:intergenic 40.0%
TATTCTTATGCGAGAGTGAG+AGG + chr1_4:60027474-60027493 None:intergenic 40.0%
TCTCACTCTCGCATAAGAAT+AGG - chr1_4:60027473-60027492 Msa0174370:intron 40.0%
ACCGTGTCTCTTAAAACTAC+TGG - chr1_4:60027615-60027634 Msa0174370:intron 40.0%
!!! CCCAGTAGTTTTAAGAGACA+CGG + chr1_4:60027619-60027638 None:intergenic 40.0%
CCGTGTCTCTTAAAACTACT+GGG - chr1_4:60027616-60027635 Msa0174370:intron 40.0%
CGTGTCTCTTAAAACTACTG+GGG - chr1_4:60027617-60027636 Msa0174370:intron 40.0%
GACTGTCATCCTATAAAGCA+AGG + chr1_4:60027951-60027970 None:intergenic 40.0%
ATCAATACAAGTGAGAGCAG+AGG - chr1_4:60028081-60028100 Msa0174370:intron 40.0%
! CCTTAAGCAGTTGGATTTTC+CGG - chr1_4:60028114-60028133 Msa0174370:intron 40.0%
GGAAAAAAGGAATGAGCAAG+TGG - chr1_4:60028370-60028389 Msa0174370:intron 40.0%
TGAGCAAGTGGAAGAAATAG+AGG - chr1_4:60028382-60028401 Msa0174370:intron 40.0%
GAAATAGAGGAAAATGGGAG+GGG - chr1_4:60028395-60028414 Msa0174370:intron 40.0%
TACTAAACCCTCCTCATTTG+GGG - chr1_4:60028449-60028468 Msa0174370:intron 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - chr1_4:60028482-60028501 Msa0174370:CDS 40.0%
! TTGTATTGGAGGAGGGTTTT+GGG - chr1_4:60028483-60028502 Msa0174370:CDS 40.0%
TTGAGGGGTGGAAAATATGA+GGG + chr1_4:60028656-60028675 None:intergenic 40.0%
TTTGAGGGGTGGAAAATATG+AGG + chr1_4:60028657-60028676 None:intergenic 40.0%
TCAACATCTTAAAGGGGCAA+GGG + chr1_4:60028973-60028992 None:intergenic 40.0%
!! CAGTTTTGTAAGGACGAGTT+AGG + chr1_4:60029052-60029071 None:intergenic 40.0%
CTAACTCGTCCTTACAAAAC+TGG - chr1_4:60029050-60029069 Msa0174370:intron 40.0%
!! CCTTACAAGCCAGTTTTGTA+AGG + chr1_4:60029062-60029081 None:intergenic 40.0%
!! CCTTACAAAACTGGCTTGTA+AGG - chr1_4:60029059-60029078 Msa0174370:intron 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG + chr1_4:60029153-60029172 None:intergenic 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG + chr1_4:60029154-60029173 None:intergenic 40.0%
CTGCAATTAAGGCTAACCAA+AGG - chr1_4:60029184-60029203 Msa0174370:intron 40.0%
CTAACCAAAGGTCGCAATTT+AGG - chr1_4:60029196-60029215 Msa0174370:intron 40.0%
TGGAAATTCCGCCTTAATTG+CGG + chr1_4:60029236-60029255 None:intergenic 40.0%
CAATTCTGGATGCCTATCTT+AGG - chr1_4:60029313-60029332 Msa0174370:intron 40.0%
GGGTCATCCTTATAGAAGAT+AGG - chr1_4:60029338-60029357 Msa0174370:intron 40.0%
!! TTGCTGACTTGGCTAATAAC+AGG - chr1_4:60029430-60029449 Msa0174370:intron 40.0%
CATGAGTTGCTGCCTATAAT+AGG + chr1_4:60029691-60029710 None:intergenic 40.0%
GGCAGCAACTCATGAATTTA+TGG - chr1_4:60029697-60029716 Msa0174370:intron 40.0%
GAACACCGAGTAAATCTTCT+GGG + chr1_4:60029934-60029953 None:intergenic 40.0%
AGAACACCGAGTAAATCTTC+TGG + chr1_4:60029935-60029954 None:intergenic 40.0%
TGTGCCACATCTACTTAATG+TGG + chr1_4:60030047-60030066 None:intergenic 40.0%
! GGTGCATTCATGGAAAGTAT+AGG + chr1_4:60030266-60030285 None:intergenic 40.0%
ATATAATCAGGAGAACAGGG+TGG + chr1_4:60030287-60030306 None:intergenic 40.0%
TGGATGTCTTTATTGCAACG+TGG - chr1_4:60030335-60030354 Msa0174370:CDS 40.0%
ACGCACCATTTATGCTAAAC+TGG - chr1_4:60030439-60030458 Msa0174370:intron 40.0%
CGCACCATTTATGCTAAACT+GGG - chr1_4:60030440-60030459 Msa0174370:intron 40.0%
TCATCTGAAAATGTGATGCC+TGG - chr1_4:60030618-60030637 Msa0174370:intron 40.0%
ATCATAGTCAAAGCCACAGA+AGG + chr1_4:60030821-60030840 None:intergenic 40.0%
CTGGTAAGACTTCATCTATC+AGG + chr1_4:60030887-60030906 None:intergenic 40.0%
TCTCTCTAACCATTCTCTTG+AGG - chr1_4:60030914-60030933 Msa0174370:intron 40.0%
TGCAGCCTACAAATATTCAG+AGG + chr1_4:60031028-60031047 None:intergenic 40.0%
CATCTTCTGCAAGACATTTC+AGG - chr1_4:60031087-60031106 Msa0174370:intron 40.0%
TATTTACTGTACCACGCCAT+AGG - chr1_4:60031165-60031184 Msa0174370:intron 40.0%
TTTGTAATTCTCCTATGGCG+TGG + chr1_4:60031179-60031198 None:intergenic 40.0%
TCGAAAACAAGTTGTCAGCT+TGG + chr1_4:60031238-60031257 None:intergenic 40.0%
GGAATCAAGAACAGCTTCTA+GGG + chr1_4:60031457-60031476 None:intergenic 40.0%
TGGAATCAAGAACAGCTTCT+AGG + chr1_4:60031458-60031477 None:intergenic 40.0%
!! TTGCAGAACTGCTTTTGTAC+TGG + chr1_4:60031478-60031497 None:intergenic 40.0%
AGTACAAAAGCAGTTCTGCA+AGG - chr1_4:60031477-60031496 Msa0174370:intron 40.0%
! CATTTTATCTCTCTCCCTTC+AGG - chr1_4:60031640-60031659 Msa0174370:intron 40.0%
! GATCAGTTCCTCCTATTTTC+AGG - chr1_4:60031770-60031789 Msa0174370:intron 40.0%
TCCTCAGCTATTCAAGTACA+TGG - chr1_4:60031803-60031822 Msa0174370:intron 40.0%
ACCATGTACTTGAATAGCTG+AGG + chr1_4:60031807-60031826 None:intergenic 40.0%
! TCCTTGCCTCAGTGATTTTT+GGG + chr1_4:60031919-60031938 None:intergenic 40.0%
! ATCCTTGCCTCAGTGATTTT+TGG + chr1_4:60031920-60031939 None:intergenic 40.0%
AACTTATGAGGAATGCAGTG+AGG + chr1_4:60032010-60032029 None:intergenic 40.0%
! GAAATAGCTGCTTCCTTTTC+TGG - chr1_4:60032046-60032065 Msa0174370:intron 40.0%
TCTAACACTACCACCAGAAA+AGG + chr1_4:60032062-60032081 None:intergenic 40.0%
!! TTTTCTGGTGGTAGTGTTAG+AGG - chr1_4:60032061-60032080 Msa0174370:intron 40.0%
ATCTAGACCTGCATTTGTTC+CGG - chr1_4:60032090-60032109 Msa0174370:intron 40.0%
! TCGTCTAGCTTGATTTCCAA+AGG - chr1_4:60032377-60032396 Msa0174370:intron 40.0%
CAGGATAAGTGAAATCCTCT+GGG + chr1_4:60032554-60032573 None:intergenic 40.0%
TCAGGATAAGTGAAATCCTC+TGG + chr1_4:60032555-60032574 None:intergenic 40.0%
GTGTTGTAAACCTCTTCTTC+AGG + chr1_4:60032573-60032592 None:intergenic 40.0%
AGAGGTTTACAACACCGAAT+TGG - chr1_4:60032578-60032597 Msa0174370:intron 40.0%
GAGGTTTACAACACCGAATT+GGG - chr1_4:60032579-60032598 Msa0174370:intron 40.0%
TACAACACCGAATTGGGTTA+AGG - chr1_4:60032585-60032604 Msa0174370:intron 40.0%
ACAAACATGTGCACTTCTCT+CGG + chr1_4:60032705-60032724 None:intergenic 40.0%
TGGGTAGGTCAAATACTCAA+AGG - chr1_4:60033062-60033081 Msa0174370:CDS 40.0%
GGGTAGGTCAAATACTCAAA+GGG - chr1_4:60033063-60033082 Msa0174370:CDS 40.0%
! GGTATTGAGTGGCATCATAT+TGG - chr1_4:60033168-60033187 Msa0174370:intron 40.0%
AACTGGATATCCAGTTCCTA+AGG - chr1_4:60033371-60033390 Msa0174370:intron 40.0%
ACTTCTTGCTTGATGAGGTT+GGG - chr1_4:60033434-60033453 Msa0174370:intron 40.0%
CTTCTCTATGCATCTCCTAA+TGG - chr1_4:60033556-60033575 Msa0174370:CDS 40.0%
GTGTCTTGATCCAATTCCAT+TGG - chr1_4:60033632-60033651 Msa0174370:CDS 40.0%
ACAAGTTTGTCCAGTATAGG+AGG + chr1_4:60033660-60033679 None:intergenic 40.0%
AGCAAAGTTGGCTAAAACCA+AGG - chr1_4:60033683-60033702 Msa0174370:intron 40.0%
TGGAAACTGGATAGTTTCAG+GGG - chr1_4:60033960-60033979 Msa0174370:five_prime_UTR 40.0%
CAGAGTTGGAGGAATTGGAA+GGG + chr1_4:60024582-60024601 None:intergenic 45.0%
TTGATCGGGATCGAATTCAG+AGG + chr1_4:60024647-60024666 None:intergenic 45.0%
GCGCTACGGATACTATAAAG+AGG - chr1_4:60024886-60024905 Msa0174370:intron 45.0%
ACACCGACATTTCTGATCGA+AGG - chr1_4:60024916-60024935 Msa0174370:intron 45.0%
! TTTCTGATCGAAGGTGTGTC+CGG - chr1_4:60024925-60024944 Msa0174370:intron 45.0%
TATGGAACAGCTTCTCGACA+AGG - chr1_4:60025141-60025160 Msa0174370:CDS 45.0%
ATGCACTTGCCAAGTCTATC+AGG + chr1_4:60025678-60025697 None:intergenic 45.0%
!!! CGGAGCAATGCCGATTTTTA+AGG - chr1_4:60025737-60025756 Msa0174370:intron 45.0%
CAGTCAACATTTCAAGCCAG+GGG - chr1_4:60025994-60026013 Msa0174370:intron 45.0%
TTTGCCCATGTTGGGAAAAC+TGG + chr1_4:60026187-60026206 None:intergenic 45.0%
!! GAAGCTCATTGACTCTGATG+TGG - chr1_4:60026223-60026242 Msa0174370:intron 45.0%
TAAAAGACACCACCAAAGGG+TGG + chr1_4:60026396-60026415 None:intergenic 45.0%
AAAGCCTATACGTGAGTGAG+AGG - chr1_4:60026661-60026680 Msa0174370:CDS 45.0%
AAGCCTATACGTGAGTGAGA+GGG - chr1_4:60026662-60026681 Msa0174370:CDS 45.0%
TCCACCAGTAACTATCACCA+TGG - chr1_4:60026815-60026834 Msa0174370:intron 45.0%
TCCATGGTGATAGTTACTGG+TGG + chr1_4:60026819-60026838 None:intergenic 45.0%
GGTTTCGATTACAGGAGGTA+AGG + chr1_4:60027102-60027121 None:intergenic 45.0%
TTGCAGGTTTCGATTACAGG+AGG + chr1_4:60027107-60027126 None:intergenic 45.0%
TCCAACACATTGAGAGAAGG+GGG - chr1_4:60027166-60027185 Msa0174370:intron 45.0%
TAAGGAGCTGCAGTTCACAA+AGG - chr1_4:60027323-60027342 Msa0174370:intron 45.0%
AAGGAGCTGCAGTTCACAAA+GGG - chr1_4:60027324-60027343 Msa0174370:intron 45.0%
TGCAGTTCACAAAGGGTGAA+GGG - chr1_4:60027331-60027350 Msa0174370:CDS 45.0%
CAAAGGGTGAAGGGAGAAAA+CGG - chr1_4:60027340-60027359 Msa0174370:CDS 45.0%
ACGGTGTGTAAGAGGAAAAC+AGG - chr1_4:60027359-60027378 Msa0174370:CDS 45.0%
CGGTGTGTAAGAGGAAAACA+GGG - chr1_4:60027360-60027379 Msa0174370:CDS 45.0%
GGTGTGTAAGAGGAAAACAG+GGG - chr1_4:60027361-60027380 Msa0174370:CDS 45.0%
! ATAGCTTGCAGACAGACCAA+GGG + chr1_4:60027809-60027828 None:intergenic 45.0%
!! ATGCATGTTCAAGGGGTGTT+TGG - chr1_4:60027892-60027911 Msa0174370:intron 45.0%
!! TGCATGTTCAAGGGGTGTTT+GGG - chr1_4:60027893-60027912 Msa0174370:intron 45.0%
!! GAGAGGTGTCCTTGCTTTAT+AGG - chr1_4:60027939-60027958 Msa0174370:intron 45.0%
AATCTGAGAATAGCTTCCCC+TGG + chr1_4:60028057-60028076 None:intergenic 45.0%
CCGGAAAATCCAACTGCTTA+AGG + chr1_4:60028117-60028136 None:intergenic 45.0%
! ATTAAAAGGAGGGCACACGA+AGG + chr1_4:60028276-60028295 None:intergenic 45.0%
!! TTGGGCTTTGTTTGCGAGTT+TGG - chr1_4:60028324-60028343 Msa0174370:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr1_4:60028328-60028347 Msa0174370:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr1_4:60028329-60028348 Msa0174370:intron 45.0%
ACTAAACCCTCCTCATTTGG+GGG - chr1_4:60028450-60028469 Msa0174370:intron 45.0%
TAAGTTCCCCCAAATGAGGA+GGG + chr1_4:60028459-60028478 None:intergenic 45.0%
TTAAGTTCCCCCAAATGAGG+AGG + chr1_4:60028460-60028479 None:intergenic 45.0%
! TGTATTGGAGGAGGGTTTTG+GGG - chr1_4:60028484-60028503 Msa0174370:CDS 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG + chr1_4:60028329-60028348 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + chr1_4:60028328-60028347 None:intergenic 45.0%
!! CAAGGCTTTGTTTGCGAGTT+TGG + chr1_4:60028700-60028719 None:intergenic 45.0%
CAAACTCGCAAACAAAGCCT+TGG - chr1_4:60028698-60028717 Msa0174370:CDS 45.0%
GCTCACCTGAATGTCTGTAA+TGG + chr1_4:60028851-60028870 None:intergenic 45.0%
AGCCCCGAGGAAATAAACAA+TGG - chr1_4:60028868-60028887 Msa0174370:intron 45.0%
GAGAAGATGCTGAAGGAGAA+AGG + chr1_4:60028903-60028922 None:intergenic 45.0%
TCCTTCAGCATCTTCTCACA+AGG - chr1_4:60028906-60028925 Msa0174370:intron 45.0%
ACCTTGTGAGAAGATGCTGA+AGG + chr1_4:60028910-60028929 None:intergenic 45.0%
GTCAACATCTTAAAGGGGCA+AGG + chr1_4:60028974-60028993 None:intergenic 45.0%
!! CAAAACTGGCTTGTAAGGTG+AGG - chr1_4:60029064-60029083 Msa0174370:intron 45.0%
! AGAGTGCTATCTATCCGATG+TGG - chr1_4:60029115-60029134 Msa0174370:intron 45.0%
GAGTGCTATCTATCCGATGT+GGG - chr1_4:60029116-60029135 Msa0174370:intron 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG + chr1_4:60029152-60029171 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG + chr1_4:60029155-60029174 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG - chr1_4:60029152-60029171 Msa0174370:intron 45.0%
! AGCCAACACAATGAAGGTGT+TGG - chr1_4:60029158-60029177 Msa0174370:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG + chr1_4:60029163-60029182 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - chr1_4:60029161-60029180 Msa0174370:intron 45.0%
! GGCTCTGATCTGAACAATTC+TGG - chr1_4:60029299-60029318 Msa0174370:intron 45.0%
TCTGGATGCCTATCTTAGGT+TGG - chr1_4:60029317-60029336 Msa0174370:intron 45.0%
CTGGATGCCTATCTTAGGTT+GGG - chr1_4:60029318-60029337 Msa0174370:intron 45.0%
AGGATGACCCAACCTAAGAT+AGG + chr1_4:60029328-60029347 None:intergenic 45.0%
! TGCCAGGAATTTTGCAACTG+CGG - chr1_4:60029883-60029902 Msa0174370:intron 45.0%
AGGCCTGAATGTGTTGAAAG+TGG - chr1_4:60030240-60030259 Msa0174370:intron 45.0%
! AGGCCACTTTCAACACATTC+AGG + chr1_4:60030246-60030265 None:intergenic 45.0%
ACAAAAGCAGTTCTGCAAGG+AGG - chr1_4:60031480-60031499 Msa0174370:intron 45.0%
! AATTTTGCGGAAGCCCTGAA+GGG + chr1_4:60031657-60031676 None:intergenic 45.0%
! AAATTTTGCGGAAGCCCTGA+AGG + chr1_4:60031658-60031677 None:intergenic 45.0%
! CAAGTACATGGTTTGGCAGA+AGG - chr1_4:60031815-60031834 Msa0174370:intron 45.0%
TGTCGTCCCAAAAATCACTG+AGG - chr1_4:60031910-60031929 Msa0174370:intron 45.0%
TCCCAAAAATCACTGAGGCA+AGG - chr1_4:60031915-60031934 Msa0174370:intron 45.0%
CAAGGATCCACTTGTAGACT+TGG - chr1_4:60031933-60031952 Msa0174370:intron 45.0%
GAATGCAGTGAGGATATGGA+AGG + chr1_4:60032000-60032019 None:intergenic 45.0%
TGAGGAATGCAGTGAGGATA+TGG + chr1_4:60032004-60032023 None:intergenic 45.0%
! ATAGCTGCTTCCTTTTCTGG+TGG - chr1_4:60032049-60032068 Msa0174370:intron 45.0%
TCTAGACCTGCATTTGTTCC+GGG - chr1_4:60032091-60032110 Msa0174370:intron 45.0%
ATTTCTCCCGGAACAAATGC+AGG + chr1_4:60032100-60032119 None:intergenic 45.0%
TGTAGAAAATTCCGGTCAGC+TGG - chr1_4:60032121-60032140 Msa0174370:intron 45.0%
! GGAATTTTTCACCAGCTGAC+CGG + chr1_4:60032135-60032154 None:intergenic 45.0%
TGGTGAAAAATTCCTGCACC+TGG - chr1_4:60032141-60032160 Msa0174370:intron 45.0%
ATGGGTAGTGAAAGGATGGT+AGG - chr1_4:60032304-60032323 Msa0174370:intron 45.0%
TGGGTAGTGAAAGGATGGTA+GGG - chr1_4:60032305-60032324 Msa0174370:intron 45.0%
!! GTGAAGCTTGCTAGTTCCTT+TGG + chr1_4:60032396-60032415 None:intergenic 45.0%
GTGCTCTTCCTTGAATGCTT+TGG - chr1_4:60032437-60032456 Msa0174370:intron 45.0%
AGGCTGACCTTAACCCAATT+CGG + chr1_4:60032595-60032614 None:intergenic 45.0%
! GTGAAGCAGATTTTGCCTCA+AGG - chr1_4:60032962-60032981 Msa0174370:intron 45.0%
TTCCGTTACTATCAGTCCTG+CGG + chr1_4:60033000-60033019 None:intergenic 45.0%
CATCAAGAAGCAATCCCTTG+CGG - chr1_4:60033029-60033048 Msa0174370:CDS 45.0%
ATCAAGAAGCAATCCCTTGC+GGG - chr1_4:60033030-60033049 Msa0174370:CDS 45.0%
GGTCAAATACTCAAAGGGCA+AGG - chr1_4:60033068-60033087 Msa0174370:CDS 45.0%
CTAGATGTGTTTCCAGAAGC+TGG + chr1_4:60033096-60033115 None:intergenic 45.0%
! CATTTTTGCCGACAAACTGC+AGG - chr1_4:60033252-60033271 Msa0174370:intron 45.0%
AACAGACTCCTGCAGTTTGT+CGG + chr1_4:60033263-60033282 None:intergenic 45.0%
TTATAGGGGTCCTTAGGAAC+TGG + chr1_4:60033384-60033403 None:intergenic 45.0%
AGTTCCTAAGGACCCCTATA+AGG - chr1_4:60033383-60033402 Msa0174370:intron 45.0%
GTTCCTAAGGACCCCTATAA+GGG - chr1_4:60033384-60033403 Msa0174370:intron 45.0%
TTTCCCTTATAGGGGTCCTT+AGG + chr1_4:60033390-60033409 None:intergenic 45.0%
! GGTTGACTTCTTGCTTGATG+AGG - chr1_4:60033429-60033448 Msa0174370:intron 45.0%
GACTTCTTGCTTGATGAGGT+TGG - chr1_4:60033433-60033452 Msa0174370:intron 45.0%
TTTGTTGCAACCTCATCCCT+AGG - chr1_4:60033516-60033535 Msa0174370:intron 45.0%
GAGAAGACAAGGAGAAGCTA+GGG + chr1_4:60033542-60033561 None:intergenic 45.0%
AGAGAAGACAAGGAGAAGCT+AGG + chr1_4:60033543-60033562 None:intergenic 45.0%
GGAGATGCATAGAGAAGACA+AGG + chr1_4:60033553-60033572 None:intergenic 45.0%
ATAGGAGGCTCCAATGGAAT+TGG + chr1_4:60033645-60033664 None:intergenic 45.0%
TTTATATCAGCAGGTCGGGA+AGG + chr1_4:60033755-60033774 None:intergenic 45.0%
!!! AAATAATTATTTTTTTTTGA+AGG - chr1_4:60024347-60024366 Msa0174370:three_prime_UTR 5.0%
!!! AAAAAAAATAGTTTTTTAAT+TGG - chr1_4:60027838-60027857 Msa0174370:intron 5.0%
!!! AAAAAAATAGTTTTTTAATT+GGG - chr1_4:60027839-60027858 Msa0174370:intron 5.0%
AGGGTCTGGAGAGTAGAAAC+TGG + chr1_4:60024563-60024582 None:intergenic 50.0%
TTGGAGGAATTGGAAGGGTC+TGG + chr1_4:60024577-60024596 None:intergenic 50.0%
GCAGAGTTGGAGGAATTGGA+AGG + chr1_4:60024583-60024602 None:intergenic 50.0%
GATCGCAGAGTTGGAGGAAT+TGG + chr1_4:60024587-60024606 None:intergenic 50.0%
TGTCAGTGTCAGACACACAC+CGG + chr1_4:60024947-60024966 None:intergenic 50.0%
CGGCGTGTTAGTGTTGTGTT+CGG - chr1_4:60024993-60025012 Msa0174370:CDS 50.0%
TGGCAAGTGCATCAAGTCAG+AGG - chr1_4:60025686-60025705 Msa0174370:intron 50.0%
! GACGCAGTCAGGTTTTACAC+CGG - chr1_4:60025717-60025736 Msa0174370:CDS 50.0%
ACATGGTATGAGACCCTTGG+CGG - chr1_4:60026099-60026118 Msa0174370:intron 50.0%
AGCATATGGCTATCCGCCAA+GGG + chr1_4:60026115-60026134 None:intergenic 50.0%
TAGCATATGGCTATCCGCCA+AGG + chr1_4:60026116-60026135 None:intergenic 50.0%
TGTTACAAGCCACCCTTTGG+TGG - chr1_4:60026384-60026403 Msa0174370:intron 50.0%
TGACCCTCTCACTCACGTAT+AGG + chr1_4:60026668-60026687 None:intergenic 50.0%
TGGTAGTAGCTGGTGCTTGT+TGG + chr1_4:60026847-60026866 None:intergenic 50.0%
TCCCCCTTCTCTCAATGTGT+TGG + chr1_4:60027170-60027189 None:intergenic 50.0%
CTGCAGTTCACAAAGGGTGA+AGG - chr1_4:60027330-60027349 Msa0174370:CDS 50.0%
GGGAGAAAACGGTGTGTAAG+AGG - chr1_4:60027351-60027370 Msa0174370:CDS 50.0%
!! GATAGAAGTGTCCTACCGAG+AGG - chr1_4:60027768-60027787 Msa0174370:intron 50.0%
! CATAGCTTGCAGACAGACCA+AGG + chr1_4:60027810-60027829 None:intergenic 50.0%
TGTCACCCAACACTGCAGTT+TGG - chr1_4:60027917-60027936 Msa0174370:intron 50.0%
CCTCTCCAAACTGCAGTGTT+GGG + chr1_4:60027925-60027944 None:intergenic 50.0%
ACCTCTCCAAACTGCAGTGT+TGG + chr1_4:60027926-60027945 None:intergenic 50.0%
TGCTGTGCTCCTTAAGCAGT+TGG - chr1_4:60028105-60028124 Msa0174370:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr1_4:60028327-60028346 Msa0174370:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr1_4:60028334-60028353 Msa0174370:intron 50.0%
AGGGGAAGGCTTGGGAAAAA+AGG - chr1_4:60028357-60028376 Msa0174370:intron 50.0%
ATAGAGGAAAATGGGAGGGG+AGG - chr1_4:60028398-60028417 Msa0174370:intron 50.0%
TAGAGGAAAATGGGAGGGGA+GGG - chr1_4:60028399-60028418 Msa0174370:intron 50.0%
! AAAATGGGAGGGGAGGGTTT+TGG - chr1_4:60028405-60028424 Msa0174370:intron 50.0%
! AAATGGGAGGGGAGGGTTTT+GGG - chr1_4:60028406-60028425 Msa0174370:intron 50.0%
!! GTATTGGAGGAGGGTTTTGG+GGG - chr1_4:60028485-60028504 Msa0174370:CDS 50.0%
!!! TATTGGAGGAGGGTTTTGGG+GGG - chr1_4:60028486-60028505 Msa0174370:CDS 50.0%
! AGGGGAAGGAAAGGCTTTGA+GGG + chr1_4:60028672-60028691 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + chr1_4:60028327-60028346 None:intergenic 50.0%
ACATCTTAAAGGGGCAAGGG+AGG + chr1_4:60028970-60028989 None:intergenic 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + chr1_4:60029132-60029151 None:intergenic 50.0%
! GGTGTTGGAGGCTGCAATTA+AGG - chr1_4:60029173-60029192 Msa0174370:intron 50.0%
GTCGCCTAAATTGCGACCTT+TGG + chr1_4:60029203-60029222 None:intergenic 50.0%
AGGTCGCAATTTAGGCGACT+AGG - chr1_4:60029204-60029223 Msa0174370:intron 50.0%
GGTCGCAATTTAGGCGACTA+GGG - chr1_4:60029205-60029224 Msa0174370:intron 50.0%
GTCGCAATTTAGGCGACTAG+GGG - chr1_4:60029206-60029225 Msa0174370:intron 50.0%
CTCCGCAGTTGCAAAATTCC+TGG + chr1_4:60029888-60029907 None:intergenic 50.0%
! CAGGAATTTTGCAACTGCGG+AGG - chr1_4:60029886-60029905 Msa0174370:intron 50.0%
AGAACAGGGTGGTGCATTCA+TGG + chr1_4:60030276-60030295 None:intergenic 50.0%
TGGTTAGAGAGAGCTGCTTC+TGG + chr1_4:60030906-60030925 None:intergenic 50.0%
! GCTCTGCTCCATCCTTTTTC+AGG + chr1_4:60031428-60031447 None:intergenic 50.0%
ATTGTGCCAGCACTAGGACA+AGG + chr1_4:60031868-60031887 None:intergenic 50.0%
!! CCTAGTGCTGGCACAATTGT+CGG - chr1_4:60031871-60031890 Msa0174370:intron 50.0%
! CTTGAAAGCATACCAGGTGC+AGG + chr1_4:60032156-60032175 None:intergenic 50.0%
CGGTGCTTACGTATACCTTG+AGG + chr1_4:60032980-60032999 None:intergenic 50.0%
! AAGGTATACGTAAGCACCGC+AGG - chr1_4:60032981-60033000 Msa0174370:intron 50.0%
CACCGCAGGACTGATAGTAA+CGG - chr1_4:60032995-60033014 Msa0174370:intron 50.0%
! TGGGAGAAACAGTGTTGCTG+TGG - chr1_4:60033453-60033472 Msa0174370:intron 50.0%
TGATTGTCGCTACTGCAGAG+CGG - chr1_4:60033610-60033629 Msa0174370:CDS 50.0%
TCCATTGGAGCCTCCTATAC+TGG - chr1_4:60033647-60033666 Msa0174370:CDS 50.0%
TCCAGTATAGGAGGCTCCAA+TGG + chr1_4:60033651-60033670 None:intergenic 50.0%
GGAAGTGATCGCAGAGTTGG+AGG + chr1_4:60024593-60024612 None:intergenic 55.0%
AGGGGAAGTGATCGCAGAGT+TGG + chr1_4:60024596-60024615 None:intergenic 55.0%
GAGGGTCGATTATCAGCCCT+TGG + chr1_4:60027455-60027474 None:intergenic 55.0%
!! AGAAGTGTCCTACCGAGAGG+AGG - chr1_4:60027771-60027790 Msa0174370:intron 55.0%
ATTGAGCCGACACCTCCTCT+CGG + chr1_4:60027786-60027805 None:intergenic 55.0%
CCCAACACTGCAGTTTGGAG+AGG - chr1_4:60027922-60027941 Msa0174370:intron 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr1_4:60028333-60028352 Msa0174370:intron 55.0%
! AATGGGAGGGGAGGGTTTTG+GGG - chr1_4:60028407-60028426 Msa0174370:intron 55.0%
!!! AGGAGGGTTTTGGGGGGTTT+TGG - chr1_4:60028492-60028511 Msa0174370:CDS 55.0%
!!! AGGGTTTTGGGGGGTTTTGG+AGG - chr1_4:60028495-60028514 Msa0174370:CDS 55.0%
!!! GGGTTTTGGGGGGTTTTGGA+GGG - chr1_4:60028496-60028515 Msa0174370:CDS 55.0%
!! GAAGGAAAGGCTTTGAGGGG+TGG + chr1_4:60028668-60028687 None:intergenic 55.0%
!! GGGGAAGGAAAGGCTTTGAG+GGG + chr1_4:60028671-60028690 None:intergenic 55.0%
GAGGGGAAGGAAAGGCTTTG+AGG + chr1_4:60028673-60028692 None:intergenic 55.0%
TTTGCGAGTTTGGAGGGGAG+GGG + chr1_4:60028690-60028709 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+GGG + chr1_4:60028333-60028352 None:intergenic 55.0%
TGTTTGCGAGTTTGGAGGGG+AGG + chr1_4:60028332-60028351 None:intergenic 55.0%
TCTTAAAGGGGCAAGGGAGG+AGG + chr1_4:60028967-60028986 None:intergenic 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG + chr1_4:60029149-60029168 None:intergenic 55.0%
GCAATTTAGGCGACTAGGGG+CGG - chr1_4:60029209-60029228 Msa0174370:intron 55.0%
! CGGAGGAGTACGTGAAGACA+CGG - chr1_4:60029903-60029922 Msa0174370:intron 55.0%
! AGGAGGCATGAACGTCTTGC+TGG - chr1_4:60031497-60031516 Msa0174370:intron 55.0%
CCGACAATTGTGCCAGCACT+AGG + chr1_4:60031874-60031893 None:intergenic 55.0%
AAGAAGCAATCCCTTGCGGG+AGG - chr1_4:60033033-60033052 Msa0174370:CDS 55.0%
CAAGGAGAAGCTAGGGCCTA+GGG + chr1_4:60033535-60033554 None:intergenic 55.0%
ACAAGGAGAAGCTAGGGCCT+AGG + chr1_4:60033536-60033555 None:intergenic 55.0%
AGGCGTATGCAGACGCAGTC+AGG - chr1_4:60025706-60025725 Msa0174370:CDS 60.0%
GACGGTGGCATGGTAGTAGC+TGG + chr1_4:60026857-60026876 None:intergenic 60.0%
! GTCCTACCGAGAGGAGGTGT+CGG - chr1_4:60027777-60027796 Msa0174370:intron 60.0%
!! GAGGTGTCGGCTCAATCCCT+TGG - chr1_4:60027790-60027809 Msa0174370:intron 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG - chr1_4:60028338-60028357 Msa0174370:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr1_4:60028339-60028358 Msa0174370:intron 60.0%
!! ATGGGAGGGGAGGGTTTTGG+GGG - chr1_4:60028408-60028427 Msa0174370:intron 60.0%
TTGGAGGGGAGGGGAAGGAA+AGG + chr1_4:60028681-60028700 None:intergenic 60.0%
AGACATTCAGGTGAGCCCCG+AGG - chr1_4:60028855-60028874 Msa0174370:intron 60.0%
CTAGGGGCGGACCGCAATTA+AGG - chr1_4:60029222-60029241 Msa0174370:intron 60.0%
!! TCCTGGCCTTGTCCTAGTGC+TGG - chr1_4:60031859-60031878 Msa0174370:intron 60.0%
TCCCTTGCGGGAGGAGAAGT+TGG - chr1_4:60033042-60033061 Msa0174370:CDS 60.0%
CCCAACTTCTCCTCCCGCAA+GGG + chr1_4:60033046-60033065 None:intergenic 60.0%
CCCTTGCGGGAGGAGAAGTT+GGG - chr1_4:60033043-60033062 Msa0174370:CDS 60.0%
ACCCAACTTCTCCTCCCGCA+AGG + chr1_4:60033047-60033066 None:intergenic 60.0%
TGCGGGAGGAGAAGTTGGGT+AGG - chr1_4:60033047-60033066 Msa0174370:CDS 60.0%
AAGGGCAAGGAGCCAGCTTC+TGG - chr1_4:60033081-60033100 Msa0174370:CDS 60.0%
GAAGCTAGGGCCTAGGGATG+AGG + chr1_4:60033529-60033548 None:intergenic 60.0%
AGCCGACACCTCCTCTCGGT+AGG + chr1_4:60027782-60027801 None:intergenic 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG - chr1_4:60028337-60028356 Msa0174370:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+AGG - chr1_4:60028343-60028362 Msa0174370:intron 65.0%
GGGAAGGGAGGGGAAGGCTT+GGG - chr1_4:60028349-60028368 Msa0174370:intron 65.0%
!!! TGGGAGGGGAGGGTTTTGGG+GGG - chr1_4:60028409-60028428 Msa0174370:intron 65.0%
CGAGTTTGGAGGGGAGGGGA+AGG + chr1_4:60028686-60028705 None:intergenic 65.0%
GGGGCGGACCGCAATTAAGG+CGG - chr1_4:60029225-60029244 Msa0174370:intron 65.0%
GCCAGCACTAGGACAAGGCC+AGG + chr1_4:60031863-60031882 None:intergenic 65.0%
GGGGAAGGGAGGGGAAGGCT+TGG - chr1_4:60028348-60028367 Msa0174370:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 60024318 60034120 60024318 ID=Msa0174370;Name=Msa0174370
chr1_4 mRNA 60024318 60034120 60024318 ID=Msa0174370-mRNA-1;Parent=Msa0174370;Name=Msa0174370-mRNA-1;_AED=0.15;_eAED=0.15;_QI=158|0.95|0.95|1|0.95|0.90|21|389|781
chr1_4 exon 60024318 60024829 60024318 ID=Msa0174370-mRNA-1:exon:18907;Parent=Msa0174370-mRNA-1
chr1_4 exon 60024964 60025164 60024964 ID=Msa0174370-mRNA-1:exon:18906;Parent=Msa0174370-mRNA-1
chr1_4 exon 60025270 60025497 60025270 ID=Msa0174370-mRNA-1:exon:18905;Parent=Msa0174370-mRNA-1
chr1_4 exon 60025695 60025745 60025695 ID=Msa0174370-mRNA-1:exon:18904;Parent=Msa0174370-mRNA-1
chr1_4 exon 60025832 60025903 60025832 ID=Msa0174370-mRNA-1:exon:18903;Parent=Msa0174370-mRNA-1
chr1_4 exon 60026276 60026392 60026276 ID=Msa0174370-mRNA-1:exon:18902;Parent=Msa0174370-mRNA-1
chr1_4 exon 60026507 60026776 60026507 ID=Msa0174370-mRNA-1:exon:18901;Parent=Msa0174370-mRNA-1
chr1_4 exon 60026920 60027029 60026920 ID=Msa0174370-mRNA-1:exon:18900;Parent=Msa0174370-mRNA-1
chr1_4 exon 60027330 60027396 60027330 ID=Msa0174370-mRNA-1:exon:18899;Parent=Msa0174370-mRNA-1
chr1_4 exon 60027503 60027576 60027503 ID=Msa0174370-mRNA-1:exon:18898;Parent=Msa0174370-mRNA-1
chr1_4 exon 60028482 60028549 60028482 ID=Msa0174370-mRNA-1:exon:18897;Parent=Msa0174370-mRNA-1
chr1_4 exon 60028640 60028740 60028640 ID=Msa0174370-mRNA-1:exon:18896;Parent=Msa0174370-mRNA-1
chr1_4 exon 60029511 60029633 60029511 ID=Msa0174370-mRNA-1:exon:18895;Parent=Msa0174370-mRNA-1
chr1_4 exon 60030303 60030380 60030303 ID=Msa0174370-mRNA-1:exon:18894;Parent=Msa0174370-mRNA-1
chr1_4 exon 60032489 60032566 60032489 ID=Msa0174370-mRNA-1:exon:18893;Parent=Msa0174370-mRNA-1
chr1_4 exon 60032680 60032778 60032680 ID=Msa0174370-mRNA-1:exon:18892;Parent=Msa0174370-mRNA-1
chr1_4 exon 60033017 60033124 60033017 ID=Msa0174370-mRNA-1:exon:18891;Parent=Msa0174370-mRNA-1
chr1_4 exon 60033276 60033330 60033276 ID=Msa0174370-mRNA-1:exon:18890;Parent=Msa0174370-mRNA-1
chr1_4 exon 60033531 60033670 60033531 ID=Msa0174370-mRNA-1:exon:18889;Parent=Msa0174370-mRNA-1
chr1_4 exon 60033757 60034069 60033757 ID=Msa0174370-mRNA-1:exon:18888;Parent=Msa0174370-mRNA-1
chr1_4 exon 60034093 60034120 60034093 ID=Msa0174370-mRNA-1:exon:18887;Parent=Msa0174370-mRNA-1
chr1_4 five_prime_UTR 60034093 60034120 60034093 ID=Msa0174370-mRNA-1:five_prime_utr;Parent=Msa0174370-mRNA-1
chr1_4 five_prime_UTR 60033940 60034069 60033940 ID=Msa0174370-mRNA-1:five_prime_utr;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60033757 60033939 60033757 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60033531 60033670 60033531 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60033276 60033330 60033276 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60033017 60033124 60033017 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60032680 60032778 60032680 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60032489 60032566 60032489 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60030303 60030380 60030303 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60029511 60029633 60029511 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60028640 60028740 60028640 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60028482 60028549 60028482 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60027503 60027576 60027503 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60027330 60027396 60027330 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60026920 60027029 60026920 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60026507 60026776 60026507 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60026276 60026392 60026276 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60025832 60025903 60025832 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60025695 60025745 60025695 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60025270 60025497 60025270 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60024964 60025164 60024964 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 CDS 60024707 60024829 60024707 ID=Msa0174370-mRNA-1:cds;Parent=Msa0174370-mRNA-1
chr1_4 three_prime_UTR 60024318 60024706 60024318 ID=Msa0174370-mRNA-1:three_prime_utr;Parent=Msa0174370-mRNA-1
Gene Sequence

>Msa0174370

ATGGGTACATCAGATGAAGTACAATTGGACGATAAAGCAAAGAGAATGCGCGATCTGCTTTCCAGTTTCTACTCTCCAGACCCTTCCAATTCCTCCAACTCTGCGATCACTTCCCCTAAATACGCTTCTCTCGATGACATTAACTCCTCTGAATTCGATCCCGATCAATACATGAACATTCTGGTTTATAAATCGAATTTGGAAGGTTTACTTCAACGACATGTTGAAATGGCAGCTGAAATTAAGAATCTTGATACTGATTTGCAAATGCTTGTTTATGAGAATTACAATAAGTTCATCAGCGCTACGGATACTATAAAGAGGATGAAAAGTAACATTTCAGGGATGGAGACTAATATGGAACAGCTTCTCGACAAGATAATGTCTGTTCAGTCAAGGAGTGACAACGTGAACACTTCTCTATTTGACAAAAGGGAGCATATTGAGAAACTGCATAGGACTTGTAATCTTCTTCGCAAAGTTCAGTTTATATATGATCTTCCTGATAGACTTGGCAAGTGCATCAAGTCAGAGGCGTATGCAGACGCAGTCAGGTTTTACACCGGAGCAATGCCGATTTTTAAGGCATATGGAGATTCATCATTCAAGGACTGTAAGCAAGCATCTGAAGAAGCGATAGCTAATGTAATAAAAAACTTGCAGGGGAAGCTATTCTCAGATTCTGAATCAATACAAGTGAGAGCAGAGGCTGCTGTGCTCCTTAAGCAGTTGGATTTTCCGGTGAACAATTTGAAGACAAAATTACTTGAGAAATTAGAACAATCCATTACAGACATTCAGGTGAGCCCCGAGGAAATAAACAATGGTTCAGGAGACCTTTCTCCTTCAGCATCTTCTCACAAGGCAGCAACTCATGAATTTATGGAGGCTGTCCGTGCTCTTCTAGTGATATTTCCGGATTCAGAAAAGCAGTTGATCAAATTTGCTCAAGATTTGGTTACCAAGAATTTTGCAACTGCGGAGGAGTACGTGAAGACACGGATTCACCCAGAAGATTTACTCGGTGTTCTTCGAGTTGTCTGGGATGATGTACTCCTGATAGATGAAGTCTTACCAGAAGCAGCTCTCTCTAACCATTCTCTTGAGGCTGCAAATGTTGTTGTCAAGTTGTATGTTAGAAGTGCATTTTCTCATCTTCTGCAAGACATTTCAGATTCTTTCTTACAAGTCCTGAAAAAGGATGGAGCAGAGCAGTACTCCCTAGAAGCTGTTCTTGATTCCAGTACAAAAGCAGTTCTGCAAGGAGGCATGAACGTCTTGCTGGGCTTCCGCAAAATTTTAGATGATGACTCTGGGATCTTAGTTAGACAAAGAGAGTTATTTGTTGATTTGGTTCAAGAAGGATTTCAAACTTTTTTTAAGCAACTTGAAGATCAGTTCCTCCTATTTTCAGGAAGAAATAATTCCTCAGCTATTCAAGTACATGGTTTGGCAGAAGGAGCTATCGATGAAAAAGCTTTTCCTGGCCTTGTCCTAGTGCTGGCACAATTGTCGGCTTTTATTGAACAAACTGTCGTCCCAAAAATCACTGAGGAAATAGCTGCTTCCTTTTCTGGTGGTAGTGTTAGAGGCTATGAATCTAGACCTGCATTTGTTCCGGGAGAAATCTGTAGAAAATTCCGGTCAGCTGGTGAAAAATTCCTGCACCTGTACATAAATATGAGAACCCAGAGGATTTCACTTATCCTGAAGAAGAGGTTTACAACACCGAATTGGGTTAAGCATAAGGAGCCGAGAGAAGTGCACATGTTTGTTGATTTTTTTCTTCAAGAGCTTGAAGTTATACATAATGAAGTGAAGCAGATTTTGCCTCAAGGTATACGTAAGCACCGCAGGACTGATAGTAACGGAAGCAGTGTTTCATCAAGAAGCAATCCCTTGCGGGAGGAGAAGTTGGGTAGGTCAAATACTCAAAGGGCAAGGAGCCAGCTTCTGGAAACACATCTAGCAAAACTGTTTAAGCAAAAAGTTGAAATTTTCACAAAAATAGAATATACACAGGAGTCTGTTGTTACTACAATAGTGAAATTCTGCCTGAAAAGTGTACAAGAATTTGTCCGTCTCCAAACTTTTAATCGAAGTGGATTCCAACAAATTCAACTGGATATCCAGTTCCTAAGGACCCCTATAAGGGAAATAGTTGAAGATGAAGCTGCGGTTGACTTCTTGCTTGATGAGGTTGGGAGAAACAGTGTTGCTGTGGTGATTGTCGCTACTGCAGAGCGGTGTCTTGATCCAATTCCATTGGAGCCTCCTATACTGGACAAACTTGTACAAGCAAAGTTGGCTAAAACCAAGGAACAAAACACAACAATCTCTTCATAA

Protein sequence

>Msa0174370

MGTSDEVQLDDKAKRMRDLLSSFYSPDPSNSSNSAITSPKYASLDDINSSEFDPDQYMNILVYKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMETNMEQLLDKIMSVQSRSDNVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLGKCIKSEAYADAVRFYTGAMPIFKAYGDSSFKDCKQASEEAIANVIKNLQGKLFSDSESIQVRAEAAVLLKQLDFPVNNLKTKLLEKLEQSITDIQVSPEEINNGSGDLSPSASSHKAATHEFMEAVRALLVIFPDSEKQLIKFAQDLVTKNFATAEEYVKTRIHPEDLLGVLRVVWDDVLLIDEVLPEAALSNHSLEAANVVVKLYVRSAFSHLLQDISDSFLQVLKKDGAEQYSLEAVLDSSTKAVLQGGMNVLLGFRKILDDDSGILVRQRELFVDLVQEGFQTFFKQLEDQFLLFSGRNNSSAIQVHGLAEGAIDEKAFPGLVLVLAQLSAFIEQTVVPKITEEIAASFSGGSVRGYESRPAFVPGEICRKFRSAGEKFLHLYINMRTQRISLILKKRFTTPNWVKHKEPREVHMFVDFFLQELEVIHNEVKQILPQGIRKHRRTDSNGSSVSSRSNPLREEKLGRSNTQRARSQLLETHLAKLFKQKVEIFTKIEYTQESVVTTIVKFCLKSVQEFVRLQTFNRSGFQQIQLDIQFLRTPIREIVEDEAAVDFLLDEVGRNSVAVVIVATAERCLDPIPLEPPILDKLVQAKLAKTKEQNTTISS*