AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0184310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0184310 MtrunA17_Chr5g0406251 91.468 293 5 1 1 273 1 293 0.0 547
Msa0184310 MtrunA17_Chr1g0211611 57.288 295 102 4 2 272 4 298 9.03e-96 293
Msa0184310 MtrunA17_Chr1g0202101 41.518 224 107 4 29 228 25 248 1.78e-38 141
Msa0184310 MtrunA17_Chr1g0157231 65.789 76 25 1 160 234 1 76 3.40e-24 100
Msa0184310 MtrunA17_Chr1g0157241 47.917 96 48 1 6 99 3 98 9.05e-24 94.0
Msa0184310 MtrunA17_Chr3g0143541 69.048 42 13 0 172 213 33 74 7.07e-13 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0184310 AT2G17700.1 58.042 286 99 6 1 270 1 281 1.12e-101 307
Msa0184310 AT4G35780.1 58.885 287 86 8 8 270 9 287 2.21e-100 305
Msa0184310 AT4G38470.3 53.979 289 110 7 1 270 1 285 2.90e-85 264
Msa0184310 AT4G38470.2 53.633 289 111 7 1 270 1 285 7.74e-85 264
Msa0184310 AT4G38470.1 53.633 289 111 7 1 270 1 285 1.32e-84 264

Find 147 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGTGAATAATATTATTT+TGG 0.138672 1_4:+73666563 None:intergenic
GATGCATACCTGTTAAAATT+TGG 0.175682 1_4:+73670994 None:intergenic
TGGTACTGATTCTGTGATTT+TGG 0.178849 1_4:+73672739 None:intergenic
GAAAGAAAGAGAAGAGAAAA+AGG 0.181331 1_4:+73672612 None:intergenic
CAACCACCACTGCTCTTATA+TGG 0.196623 1_4:+73664604 None:intergenic
CCAAATCTTTGTATTGTTAC+TGG 0.215233 1_4:-73667368 Msa0184310:intron
TTGGTCAAGGTTGCTGATTT+TGG 0.233442 1_4:-73666079 Msa0184310:three_prime_UTR
TGCGAAGACGCTCTTGTTCC+TGG 0.243795 1_4:-73672356 Msa0184310:CDS
CACCAACTGCTGCTTGTAAT+GGG 0.280382 1_4:+73665051 None:intergenic
AACCAAACTCAATTGATCTT+TGG 0.298813 1_4:+73664541 None:intergenic
AATATCACTTTGATGTTTAC+CGG 0.306230 1_4:-73664291 Msa0184310:three_prime_UTR
TAGGAAACTGAGGAGCTTAA+AGG 0.312768 1_4:-73669297 Msa0184310:CDS
GACCAAAGATCAATTGAGTT+TGG 0.329670 1_4:-73664543 Msa0184310:three_prime_UTR
GGTAAACATCAAAGTGATAT+TGG 0.332699 1_4:+73664293 None:intergenic
GAAAAGGCTGGTCTCTCCTT+TGG 0.340978 1_4:+73664852 None:intergenic
AACTGAAAACATCTGCCTTC+TGG 0.342226 1_4:+73665252 None:intergenic
GGATCAATATCTGTCAAATC+AGG 0.346033 1_4:-73668969 Msa0184310:CDS
CCAGTAACAATACAAAGATT+TGG 0.347163 1_4:+73667368 None:intergenic
AAAGTTGGATCTGGATCATT+TGG 0.349148 1_4:-73668822 Msa0184310:three_prime_UTR
AAGAATGTTGTTCAGTTCAT+TGG 0.353356 1_4:-73667407 Msa0184310:three_prime_UTR
ACTTCAATACTTGGTGAGAT+TGG 0.354675 1_4:-73669502 Msa0184310:CDS
TGCATACAAATACCATTTGA+TGG 0.357701 1_4:-73668890 Msa0184310:CDS
CTGGATGTCTTCGTCGTTGA+GGG 0.360869 1_4:-73669430 Msa0184310:CDS
TGTAGTAGTTCAGAAATTCT+TGG 0.367558 1_4:+73664894 None:intergenic
TGAAATGCAGGACGATTTGC+AGG 0.367645 1_4:+73671922 None:intergenic
ACATCTGCCTTCTGGTCATA+TGG 0.369157 1_4:+73665260 None:intergenic
ATCACCTGACTAAGGAGTTT+AGG 0.372336 1_4:+73670487 None:intergenic
TGTACAAGGCTTGATAGATT+TGG 0.379940 1_4:-73664239 Msa0184310:three_prime_UTR
GGAGTGATGACAGCTGAAAC+TGG 0.383152 1_4:-73666031 Msa0184310:three_prime_UTR
AATGGTATTTGTATGCAATC+AGG 0.400143 1_4:+73668896 None:intergenic
CATTTGATGGAGCTGATGTC+TGG 0.405484 1_4:-73668877 Msa0184310:CDS
AGGCAATAGCAGAGTAGAAC+AGG 0.411117 1_4:+73664499 None:intergenic
TCAGACTGTACAGGACAAAA+AGG 0.411888 1_4:+73664564 None:intergenic
AGGCTTGTCAATTGTTGAAA+AGG 0.412277 1_4:+73670507 None:intergenic
CTGCTGCTTTGGAATTGGAT+TGG 0.417239 1_4:+73672719 None:intergenic
ACACCAACTGCTGCTTGTAA+TGG 0.418160 1_4:+73665050 None:intergenic
AACAAGAGCGTCTTCGCAAT+CGG 0.420155 1_4:+73672361 None:intergenic
TGCAAGAGCTTCAAGGTTAG+AGG 0.420394 1_4:+73671071 None:intergenic
ATCAAAGTGATATTGGATAC+AGG 0.422329 1_4:+73664300 None:intergenic
TGAAGACGGAGACAATACTA+TGG 0.422490 1_4:-73671025 Msa0184310:CDS
TTTCAGTTAACTTCAATACT+TGG 0.427810 1_4:-73669511 Msa0184310:intron
GTGCAAATAGTTCATTCCCT+TGG 0.427844 1_4:+73666585 None:intergenic
TATGAAAACAAAGTTGGATC+TGG 0.429837 1_4:-73668831 Msa0184310:three_prime_UTR
TCTTAACTATTCTTTAAAGC+AGG 0.432556 1_4:-73671300 Msa0184310:CDS
TATGAAGTGCAAGAGCTTCA+AGG 0.440203 1_4:+73671064 None:intergenic
GCCAGAGTGCAAACTCAGTC+TGG 0.441380 1_4:-73666052 Msa0184310:three_prime_UTR
AGTTCATTGGTGCTTGTACT+CGG 0.441416 1_4:-73667394 Msa0184310:three_prime_UTR
CTAAAATATGAAAACAAAGT+TGG 0.441634 1_4:-73668837 Msa0184310:exon
ATTCATCCACCACCTACGTT+TGG 0.450188 1_4:-73671099 Msa0184310:CDS
AATTTCAATTATTTCAGAAA+AGG 0.452807 1_4:+73664836 None:intergenic
ACCAAAATAATATTATTCAC+AGG 0.461164 1_4:-73666564 Msa0184310:three_prime_UTR
CTGAACTACTACAGCGGTGC+TGG 0.464205 1_4:-73664884 Msa0184310:three_prime_UTR
CATTCCCTTGGAAACATCAA+TGG 0.470441 1_4:+73666597 None:intergenic
AACCACCACTGCTCTTATAT+GGG 0.472737 1_4:+73664605 None:intergenic
CTGGTTTCGATGATCAACTC+TGG 0.474777 1_4:-73672337 Msa0184310:CDS
AGTCTGGTATTGATCATTTG+AGG 0.479687 1_4:+73668934 None:intergenic
TCAATTATTTCAGAAAAGGC+TGG 0.482656 1_4:+73664840 None:intergenic
CAGTGGTGGTTGAAAATTCA+AGG 0.483983 1_4:-73664392 Msa0184310:three_prime_UTR
AAGAATTTATCACCTGACTA+AGG 0.491282 1_4:+73670479 None:intergenic
CCTCAACGACGAAGACATCC+AGG 0.491722 1_4:+73669431 None:intergenic
ATATCTGTACTTATGCGTTC+AGG 0.492325 1_4:+73668655 None:intergenic
GGGAGGATTCCATCCTAGTC+TGG 0.493173 1_4:+73668918 None:intergenic
CTTAACTATTCTTTAAAGCA+GGG 0.495977 1_4:-73671299 Msa0184310:CDS
TCTCCAACACATAGCAAAAG+AGG 0.496421 1_4:-73664814 Msa0184310:intron
ATGGTATTTGTATGCAATCA+GGG 0.497073 1_4:+73668897 None:intergenic
TGTGCATCATCTTTCTCAGA+AGG 0.499983 1_4:+73671329 None:intergenic
CAGACATCAGCTCCATCAAA+TGG 0.501454 1_4:+73668878 None:intergenic
ACTTCAATCGTCTTCCCGCT+AGG 0.504252 1_4:-73672310 Msa0184310:intron
CACAGGAAGTTTATATCATG+AGG 0.504699 1_4:-73668618 Msa0184310:intron
GCTTAAAGGTGTGTTGGAAA+AGG 0.506636 1_4:-73669283 Msa0184310:CDS
CCTGGATGTCTTCGTCGTTG+AGG 0.506878 1_4:-73669431 Msa0184310:CDS
TTGTTACGCTCGCTCTCTCA+TGG 0.507320 1_4:-73672501 Msa0184310:exon
CAAGCCTAAACTCCTTAGTC+AGG 0.511913 1_4:-73670491 Msa0184310:intron
TAAATTGCTATTAGGGTCTA+CGG 0.513896 1_4:-73664941 Msa0184310:intron
AATGGGGTCAAGTAAGAGTA+AGG 0.518427 1_4:+73665068 None:intergenic
GATCTTTGGTCAGACTGTAC+AGG 0.530537 1_4:+73664555 None:intergenic
AGTAGCCATTGATGTTTCCA+AGG 0.531408 1_4:-73666602 Msa0184310:three_prime_UTR
TGAGGAGCTTAAAGGTGTGT+TGG 0.532691 1_4:-73669289 Msa0184310:CDS
CAAGACTGCCAATCTTCTGA+TGG 0.535133 1_4:-73666536 Msa0184310:three_prime_UTR
CTTCAAGTTTCTGACGGTGA+TGG 0.536588 1_4:+73672417 None:intergenic
CAAATGATCAATACCAGACT+AGG 0.538167 1_4:-73668931 Msa0184310:CDS
ATGTCTTCGTCGTTGAGGGA+TGG 0.538232 1_4:-73669426 Msa0184310:CDS
AGCAGTTGGTGTGGTGCAGA+AGG 0.540517 1_4:-73665039 Msa0184310:intron
CTGAATAACAATAGTTGAGA+GGG 0.544754 1_4:+73664439 None:intergenic
CTGAAACTGGAACATACCGC+TGG 0.555978 1_4:-73666018 Msa0184310:three_prime_UTR
TGAAAAGGTAATCTCGTGCA+TGG 0.557242 1_4:+73670522 None:intergenic
ACTAAACGAACTTGAAATGC+AGG 0.567369 1_4:+73671910 None:intergenic
TCATAAGAGATTGCTCGAGT+TGG 0.568149 1_4:-73671953 Msa0184310:CDS
CGTTGAGGGATGGCCTAATG+AGG 0.571774 1_4:-73669416 Msa0184310:intron
CAGAGTTGATCATCGAAACC+AGG 0.575806 1_4:+73672338 None:intergenic
GAAGAACCAAACGTAGGTGG+TGG 0.576641 1_4:+73671093 None:intergenic
TGTAAACTTCAAGTTTCTGA+CGG 0.576800 1_4:+73672411 None:intergenic
TTAACTATTCTTTAAAGCAG+GGG 0.580836 1_4:-73671298 Msa0184310:intron
ATGGGTATCAATATCAGTGA+TGG 0.582525 1_4:+73664623 None:intergenic
GACGGATGCAAGAGCAGTGG+TGG 0.583773 1_4:-73664406 Msa0184310:three_prime_UTR
TTCCTCTCATCACTTAGGCG+TGG 0.584086 1_4:-73664646 Msa0184310:three_prime_UTR
AGTTTCTGACGGTGATGGCG+AGG 0.586082 1_4:+73672422 None:intergenic
CAGGGAAAACCCATCAGAGG+TGG 0.589385 1_4:+73669450 None:intergenic
CAGTTATTGCAGTCAAGATG+TGG 0.590402 1_4:-73668695 Msa0184310:three_prime_UTR
TCCAGACTGAGTTTGCACTC+TGG 0.592327 1_4:+73666051 None:intergenic
TGAGAGAATGAAAACCTAGC+GGG 0.593092 1_4:+73672296 None:intergenic
TCAAAGTGATATTGGATACA+GGG 0.594784 1_4:+73664301 None:intergenic
GTATGCATTGGATGTGAATG+TGG 0.595523 1_4:-73671998 Msa0184310:CDS
GATCAATATCTGTCAAATCA+GGG 0.595669 1_4:-73668968 Msa0184310:CDS
GTTTCAGAGTTTATGTCGAG+AGG 0.597271 1_4:-73666685 Msa0184310:intron
GCTACTGCATAGGTATGCAT+TGG 0.597919 1_4:-73672010 Msa0184310:intron
TGATCAATACCAGACTAGGA+TGG 0.599216 1_4:-73668927 Msa0184310:CDS
GTAACAATACAAAGATTTGG+AGG 0.600790 1_4:+73667371 None:intergenic
TCAGAAGATTGGCAGTCTTG+AGG 0.601551 1_4:+73666539 None:intergenic
ATTGTTATTCAGAAGCGAGT+AGG 0.601868 1_4:-73664428 Msa0184310:three_prime_UTR
ATACCGCTGGATGGCTCCTG+AGG 0.602142 1_4:-73666005 Msa0184310:intron
AACTGGAACATACCGCTGGA+TGG 0.602404 1_4:-73666014 Msa0184310:three_prime_UTR
ACCCCATTACAAGCAGCAGT+TGG 0.604156 1_4:-73665053 Msa0184310:three_prime_UTR
TATCCTTCAACAGTTGGTCA+AGG 0.605155 1_4:-73666092 Msa0184310:intron
ATTTGATGGAGCTGATGTCT+GGG 0.606179 1_4:-73668876 Msa0184310:CDS
CCAAAATAATATTATTCACA+GGG 0.607549 1_4:-73666563 Msa0184310:three_prime_UTR
GTAGCCATTGATGTTTCCAA+GGG 0.609070 1_4:-73666601 Msa0184310:three_prime_UTR
TACCCATATAAGAGCAGTGG+TGG 0.611085 1_4:-73664607 Msa0184310:three_prime_UTR
ACCAACTGCTGCTTGTAATG+GGG 0.611610 1_4:+73665052 None:intergenic
ACTTGACTTCGTAGATTCAG+AGG 0.618214 1_4:-73668718 Msa0184310:intron
TATGCTGAAAGAGTTTGCAC+AGG 0.620613 1_4:-73668635 Msa0184310:three_prime_UTR
GAAAAGGTAATCTCGTGCAT+GGG 0.623367 1_4:+73670523 None:intergenic
TCTGAATAACAATAGTTGAG+AGG 0.625694 1_4:+73664438 None:intergenic
AAACGTGGTAAACAAAGCAA+AGG 0.628015 1_4:+73664352 None:intergenic
ATTACAAGCAGCAGTTGGTG+TGG 0.628172 1_4:-73665048 Msa0184310:three_prime_UTR
TCTGAAATTGAATTACACGT+AGG 0.632620 1_4:+73664211 None:intergenic
GAAGACGGAGACAATACTAT+GGG 0.633998 1_4:-73671024 Msa0184310:CDS
GTGCTGGCAACAAGATCCAA+AGG 0.636417 1_4:-73664868 Msa0184310:three_prime_UTR
TATTTGTATGCAATCAGGGG+AGG 0.641010 1_4:+73668901 None:intergenic
ACGGTTTCCTCTCATCACTT+AGG 0.644133 1_4:-73664651 Msa0184310:three_prime_UTR
ACACAAACCATATGACCAGA+AGG 0.644562 1_4:-73665267 Msa0184310:three_prime_UTR
ACGATGTCACGAGATGTACA+AGG 0.644803 1_4:-73664253 Msa0184310:three_prime_UTR
TTATTCAGAAGCGAGTAGGA+CGG 0.646707 1_4:-73664424 Msa0184310:three_prime_UTR
TGATACCCATATAAGAGCAG+TGG 0.651229 1_4:-73664610 Msa0184310:three_prime_UTR
ATCCAGGGAAAACCCATCAG+AGG 0.663368 1_4:+73669447 None:intergenic
GAGGAAGAACCAAACGTAGG+TGG 0.665644 1_4:+73671090 None:intergenic
CATAAAGATAAGTCATCACA+CGG 0.667424 1_4:-73664670 Msa0184310:three_prime_UTR
TGGTATTTGTATGCAATCAG+GGG 0.668001 1_4:+73668898 None:intergenic
CAAAGTGATATTGGATACAG+GGG 0.668504 1_4:+73664302 None:intergenic
CTCAACGACGAAGACATCCA+GGG 0.678141 1_4:+73669432 None:intergenic
GAATTTCTGAACTACTACAG+CGG 0.681521 1_4:-73664890 Msa0184310:three_prime_UTR
GGCCACGCCTAAGTGATGAG+AGG 0.683467 1_4:+73664644 None:intergenic
GAGAACGACATTGAGAGTTG+CGG 0.691553 1_4:-73672473 Msa0184310:CDS
TAGGACGGATGCAAGAGCAG+TGG 0.696825 1_4:-73664409 Msa0184310:three_prime_UTR
ATACCTCAGGAGCCATCCAG+CGG 0.707173 1_4:+73666002 None:intergenic
TGAGAGTTGCGGAAGCAGAG+CGG 0.745274 1_4:-73672462 Msa0184310:CDS
TTAGAGGAAGAACCAAACGT+AGG 0.767944 1_4:+73671087 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAAAATATAATATTGAT+GGG + chr1_4:73665748-73665767 None:intergenic 10.0%
!! AAATGAAAATATAATATTGA+TGG + chr1_4:73665749-73665768 None:intergenic 10.0%
!! AATACAGTATAAAATAAAAT+GGG + chr1_4:73666548-73666567 None:intergenic 10.0%
!!! ATTTTAATGTGAAATTAAAA+AGG - chr1_4:73668558-73668577 Msa0184310:intron 10.0%
!!! TTTTTAAAACTTAAAGAATT+AGG + chr1_4:73668902-73668921 None:intergenic 10.0%
!!! TTTTAAAAACTTAAAGAATT+AGG + chr1_4:73669056-73669075 None:intergenic 10.0%
!! ATATATAATTCTAAATTGTA+TGG - chr1_4:73669101-73669120 Msa0184310:intron 10.0%
!!! TATTTTATTTTAAATGTATC+AGG - chr1_4:73671062-73671081 Msa0184310:CDS 10.0%
!!! ATTTTATTTTAAATGTATCA+GGG - chr1_4:73671063-73671082 Msa0184310:CDS 10.0%
!!! ATGTTAATGTTTTTTTTATA+TGG - chr1_4:73671278-73671297 Msa0184310:intron 10.0%
!! ACAAAAAATAGAATATATAA+TGG + chr1_4:73671829-73671848 None:intergenic 10.0%
!! AATTGAAAAGGAAATTAAAA+AGG - chr1_4:73664797-73664816 Msa0184310:intron 15.0%
!! ACATTAAAAAAATAAACTAG+TGG + chr1_4:73665778-73665797 None:intergenic 15.0%
!! AATAAAAATAACATTGAAGA+CGG - chr1_4:73665887-73665906 Msa0184310:intron 15.0%
!!! AAATGATGTTTTTAAATCAT+TGG - chr1_4:73666494-73666513 Msa0184310:intron 15.0%
!!! AATGATGTTTTTAAATCATT+GGG - chr1_4:73666495-73666514 Msa0184310:intron 15.0%
!! ATACAGTATAAAATAAAATG+GGG + chr1_4:73666547-73666566 None:intergenic 15.0%
!! GAATACAGTATAAAATAAAA+TGG + chr1_4:73666549-73666568 None:intergenic 15.0%
!!! TTATTTTATACTGTATTCTT+CGG - chr1_4:73666551-73666570 Msa0184310:three_prime_UTR 15.0%
!! TATTTGTCAAATTCATTAAA+TGG + chr1_4:73667263-73667282 None:intergenic 15.0%
!! AACAATTAAAAACAAGAAAA+AGG + chr1_4:73668489-73668508 None:intergenic 15.0%
!! TCACATTAAAATAAACTATA+GGG + chr1_4:73668550-73668569 None:intergenic 15.0%
!! TTCACATTAAAATAAACTAT+AGG + chr1_4:73668551-73668570 None:intergenic 15.0%
!!! TTTTATTTTAAATGTATCAG+GGG - chr1_4:73671064-73671083 Msa0184310:CDS 15.0%
!!! TTTTTTTCTTTTCATAATTG+AGG - chr1_4:73671366-73671385 Msa0184310:intron 15.0%
!! TAAAAAAGATTTATTCTTTC+TGG - chr1_4:73671390-73671409 Msa0184310:intron 15.0%
!! AAAAAAGATTTATTCTTTCT+GGG - chr1_4:73671391-73671410 Msa0184310:intron 15.0%
!! AATTTCAATTATTTCAGAAA+AGG + chr1_4:73672093-73672112 None:intergenic 15.0%
!! TAACATCATAAAAAAAAAAG+AGG - chr1_4:73672143-73672162 Msa0184310:intron 15.0%
!! AATTTCAGAAAGAAAAAAAA+GGG - chr1_4:73672729-73672748 Msa0184310:five_prime_UTR 15.0%
!! GAATTATGATGAAATTGAAA+AGG - chr1_4:73664785-73664804 Msa0184310:intron 20.0%
!! GTTATTATTGACATAAGATT+TGG - chr1_4:73665134-73665153 Msa0184310:intron 20.0%
!!! TAAGTTTTTTGAGACTATTT+CGG - chr1_4:73665253-73665272 Msa0184310:three_prime_UTR 20.0%
!! TTAAAAAAATAAACTAGTGG+TGG + chr1_4:73665775-73665794 None:intergenic 20.0%
!!! TTTTTAACAATACTAAGACA+AGG + chr1_4:73666023-73666042 None:intergenic 20.0%
!! CTTAAAATTGTATATCATGA+AGG - chr1_4:73666250-73666269 Msa0184310:intron 20.0%
!!! TTGTTGTTTAAAATTTTGAC+TGG - chr1_4:73666350-73666369 Msa0184310:intron 20.0%
!!! ATCATTTTACAGAAGTATAA+CGG + chr1_4:73666481-73666500 None:intergenic 20.0%
!! GTAAAAAAAAATGAATGCTT+GGG + chr1_4:73666805-73666824 None:intergenic 20.0%
!! ATATATGGTCAATTTATTCT+TGG + chr1_4:73666827-73666846 None:intergenic 20.0%
!! TATTAGAGTTTATATCTATG+GGG + chr1_4:73666908-73666927 None:intergenic 20.0%
!! GTATTAGAGTTTATATCTAT+GGG + chr1_4:73666909-73666928 None:intergenic 20.0%
!! CATAGATATAAACTCTAATA+CGG - chr1_4:73666908-73666927 Msa0184310:intron 20.0%
!!! TTTACTCTTGATCTTTTTTT+AGG - chr1_4:73666997-73667016 Msa0184310:intron 20.0%
!! GAATTTGACAAATATGTTAT+TGG - chr1_4:73667269-73667288 Msa0184310:intron 20.0%
!! ATTTCAAAATACAAAGTTCT+AGG - chr1_4:73667702-73667721 Msa0184310:intron 20.0%
!! TTTCAAAATACAAAGTTCTA+GGG - chr1_4:73667703-73667722 Msa0184310:intron 20.0%
!! AAAAGGAACTGATAATAATT+TGG - chr1_4:73667822-73667841 Msa0184310:intron 20.0%
!! CTAAAATATGAAAACAAAGT+TGG - chr1_4:73668089-73668108 Msa0184310:intron 20.0%
!! GAAAAAAAAATCTCAGTAAT+AGG + chr1_4:73668374-73668393 None:intergenic 20.0%
!! TTAATGTGAAATTAAAAAGG+TGG - chr1_4:73668561-73668580 Msa0184310:intron 20.0%
!! CATCTTGATATAAATTGTAT+TGG - chr1_4:73668601-73668620 Msa0184310:intron 20.0%
!!! AATAATATCTCCAAATTTTG+TGG - chr1_4:73669300-73669319 Msa0184310:intron 20.0%
!!! AGATAAGTCATAATTTGTAA+AGG + chr1_4:73669476-73669495 None:intergenic 20.0%
!! TACAAATTATGACTTATCTT+TGG - chr1_4:73669477-73669496 Msa0184310:CDS 20.0%
!!! TATCAAACAAATTCTAGAAA+GGG + chr1_4:73669796-73669815 None:intergenic 20.0%
!!! ATATCAAACAAATTCTAGAA+AGG + chr1_4:73669797-73669816 None:intergenic 20.0%
!! CAAATATCTATAAACGATAT+TGG + chr1_4:73669832-73669851 None:intergenic 20.0%
!! CAATATCGTTTATAGATATT+TGG - chr1_4:73669830-73669849 Msa0184310:intron 20.0%
!! ACCAAAATAATATTATTCAC+AGG - chr1_4:73670362-73670381 Msa0184310:intron 20.0%
!! CCAAAATAATATTATTCACA+GGG - chr1_4:73670363-73670382 Msa0184310:intron 20.0%
!! AACAAATTCTATAATCAACT+AGG + chr1_4:73670629-73670648 None:intergenic 20.0%
!!! ATAAAATGTTGAGATGTTTT+GGG + chr1_4:73670793-73670812 None:intergenic 20.0%
!!! AATAAAATGTTGAGATGTTT+TGG + chr1_4:73670794-73670813 None:intergenic 20.0%
!!! TTTATTTTAAATGTATCAGG+GGG - chr1_4:73671065-73671084 Msa0184310:CDS 20.0%
!! TTATCCTAATCTCTTAAATT+AGG - chr1_4:73671172-73671191 Msa0184310:intron 20.0%
!! ATATTTGATTCACATTGTTT+GGG - chr1_4:73671301-73671320 Msa0184310:CDS 20.0%
!!! GCTTATATGATAATGATATT+TGG - chr1_4:73671544-73671563 Msa0184310:intron 20.0%
!! AGAAAGAAAAAAAACAGAAA+AGG + chr1_4:73671573-73671592 None:intergenic 20.0%
!! GAAACAGAAAATTGTTAAAT+AGG + chr1_4:73672207-73672226 None:intergenic 20.0%
!! CAATTTCAGAAAGAAAAAAA+AGG - chr1_4:73672728-73672747 Msa0184310:five_prime_UTR 20.0%
!!! CATTTTGACAACTTTTTGAA+CGG + chr1_4:73664690-73664709 None:intergenic 25.0%
! TGACATAAGATTTGGAAATT+TGG - chr1_4:73665142-73665161 Msa0184310:intron 25.0%
! TTAAATGAATTGTAGCATAG+TGG - chr1_4:73665187-73665206 Msa0184310:intron 25.0%
! AATAAGATGTTTATCCAAAC+AGG - chr1_4:73665484-73665503 Msa0184310:intron 25.0%
! ATAAGATGTTTATCCAAACA+GGG - chr1_4:73665485-73665504 Msa0184310:intron 25.0%
! TACAGATATGAATCAATCTA+AGG + chr1_4:73665511-73665530 None:intergenic 25.0%
! ATCTGTATTGTCTTTAATAC+AGG - chr1_4:73665524-73665543 Msa0184310:intron 25.0%
!!! TCTTAACTATTCTTTAAAGC+AGG - chr1_4:73665626-73665645 Msa0184310:intron 25.0%
!!! CTTAACTATTCTTTAAAGCA+GGG - chr1_4:73665627-73665646 Msa0184310:intron 25.0%
!!! TTAACTATTCTTTAAAGCAG+GGG - chr1_4:73665628-73665647 Msa0184310:intron 25.0%
! TGAAAGAAAATAAAACTGAC+TGG + chr1_4:73665671-73665690 None:intergenic 25.0%
!!! ATGTTATCTCTCTTTTTTCT+TGG - chr1_4:73665794-73665813 Msa0184310:intron 25.0%
!!! TGTTATCTCTCTTTTTTCTT+GGG - chr1_4:73665795-73665814 Msa0184310:intron 25.0%
! GCATCTTAATAAATTCAGTT+TGG - chr1_4:73665950-73665969 Msa0184310:intron 25.0%
!! AATAAAATTTCACGTCCTTT+TGG - chr1_4:73666114-73666133 Msa0184310:intron 25.0%
!!! GAACATTTAGTTCTATTGTT+AGG - chr1_4:73666142-73666161 Msa0184310:intron 25.0%
! TATTAACTGCTATAAGCTAA+TGG + chr1_4:73666316-73666335 None:intergenic 25.0%
!! CTTCTCACTTATTACATTTT+AGG - chr1_4:73666380-73666399 Msa0184310:intron 25.0%
!! ATTGCCTTTTGTATTAATCT+TGG - chr1_4:73666676-73666695 Msa0184310:three_prime_UTR 25.0%
! ATGTCCAAGATTAATACAAA+AGG + chr1_4:73666683-73666702 None:intergenic 25.0%
! GGTAAAAAAAAATGAATGCT+TGG + chr1_4:73666806-73666825 None:intergenic 25.0%
! CGTATTAGAGTTTATATCTA+TGG + chr1_4:73666910-73666929 None:intergenic 25.0%
! TAAAATGCTAAATGCTAAAG+AGG - chr1_4:73666969-73666988 Msa0184310:intron 25.0%
! AAGTTTCAAACAATTACAAG+AGG - chr1_4:73667088-73667107 Msa0184310:intron 25.0%
! TTCAATTTGCAAAATGAACA+AGG + chr1_4:73667121-73667140 None:intergenic 25.0%
!! TTGTTCATTTTGCAAATTGA+AGG - chr1_4:73667120-73667139 Msa0184310:intron 25.0%
! CTCAATTATTCATTTGACAA+AGG - chr1_4:73667148-73667167 Msa0184310:intron 25.0%
! TTTGACAAATATGTTATTGG+TGG - chr1_4:73667272-73667291 Msa0184310:intron 25.0%
!! GTTTGTGTAAAAAAAGGTAT+AGG + chr1_4:73667302-73667321 None:intergenic 25.0%
! TTTCAGTTAACTTCAATACT+TGG - chr1_4:73667415-73667434 Msa0184310:three_prime_UTR 25.0%
!!! AAAGGAAATTTTGAAGGTTA+AGG - chr1_4:73667661-73667680 Msa0184310:intron 25.0%
! TACCTATTCAAGATTAAGAA+GGG - chr1_4:73667770-73667789 Msa0184310:intron 25.0%
!!! CTTTGTTTTCATATTTTAGC+TGG + chr1_4:73668088-73668107 None:intergenic 25.0%
! ATACACACTTTAATTGCAAA+AGG + chr1_4:73668461-73668480 None:intergenic 25.0%
! AAGATGAAAAAACAATCCAA+AGG + chr1_4:73668704-73668723 None:intergenic 25.0%
!! ATATTTGAATCTGAAATGCA+TGG + chr1_4:73669083-73669102 None:intergenic 25.0%
! ATCTAGATTATTAAAATGCC+TGG - chr1_4:73669155-73669174 Msa0184310:intron 25.0%
! TCTAGATTATTAAAATGCCT+GGG - chr1_4:73669156-73669175 Msa0184310:intron 25.0%
!! GTTTGACTTAATTTCAATCT+TGG - chr1_4:73669194-73669213 Msa0184310:intron 25.0%
! ACTTAATTTCAATCTTGGAA+GGG - chr1_4:73669199-73669218 Msa0184310:intron 25.0%
!! AAGATAGATACTTTTCTCTA+AGG + chr1_4:73669238-73669257 None:intergenic 25.0%
!!! AAACATTCAGAAGTATTTGA+TGG + chr1_4:73669332-73669351 None:intergenic 25.0%
! TAAAACTAACTCGGATAAAA+AGG + chr1_4:73669415-73669434 None:intergenic 25.0%
! CCATATTACTAAAACTAACT+CGG + chr1_4:73669424-73669443 None:intergenic 25.0%
!! GTTTCATACTTTAGTTCAAA+GGG - chr1_4:73669622-73669641 Msa0184310:intron 25.0%
! ATGTTGAGATTTGTGTAATT+AGG - chr1_4:73669952-73669971 Msa0184310:intron 25.0%
! AAGCATTATAAAGACTACAT+TGG + chr1_4:73670067-73670086 None:intergenic 25.0%
! AATGTAGTCTTTATAATGCT+TGG - chr1_4:73670066-73670085 Msa0184310:intron 25.0%
! ATGTAGTCTTTATAATGCTT+GGG - chr1_4:73670067-73670086 Msa0184310:intron 25.0%
!! CCCTGTGAATAATATTATTT+TGG + chr1_4:73670366-73670385 None:intergenic 25.0%
! AATAACAATGAAAATGCAAC+AGG + chr1_4:73670462-73670481 None:intergenic 25.0%
!! TGTTGCATTTTCATTGTTAT+TGG - chr1_4:73670461-73670480 Msa0184310:intron 25.0%
!!! TTACTTCTGTTGGTAATATT+TGG - chr1_4:73670493-73670512 Msa0184310:CDS 25.0%
! ATAATTTACTACTAGAACTC+TGG - chr1_4:73670662-73670681 Msa0184310:intron 25.0%
!! TATTCTTCTGCTTGATATTT+TGG - chr1_4:73670968-73670987 Msa0184310:intron 25.0%
!! ATTCTTCTGCTTGATATTTT+GGG - chr1_4:73670969-73670988 Msa0184310:intron 25.0%
!!! TTATTTTAAATGTATCAGGG+GGG - chr1_4:73671066-73671085 Msa0184310:CDS 25.0%
! AAGTAAAATGCAAGTAAAAC+TGG - chr1_4:73671113-73671132 Msa0184310:intron 25.0%
!! TTTCAATATTTTGTGAACTC+CGG + chr1_4:73671147-73671166 None:intergenic 25.0%
! AGAACCTAATTTAAGAGATT+AGG + chr1_4:73671179-73671198 None:intergenic 25.0%
! AATCTCTTAAATTAGGTTCT+TGG - chr1_4:73671179-73671198 Msa0184310:intron 25.0%
!!! ACCATGGACAATATTTTTAA+GGG + chr1_4:73671209-73671228 None:intergenic 25.0%
! GATATTTGATTCACATTGTT+TGG - chr1_4:73671300-73671319 Msa0184310:CDS 25.0%
!!! AGAATATATAATGGATTAGC+AGG + chr1_4:73671820-73671839 None:intergenic 25.0%
!! ATTCTTGGATGTGTATTTTT+GGG + chr1_4:73672020-73672039 None:intergenic 25.0%
!! AATTCTTGGATGTGTATTTT+TGG + chr1_4:73672021-73672040 None:intergenic 25.0%
!!! TGCTATTGCCTTAATTTTTT+TGG - chr1_4:73672439-73672458 Msa0184310:CDS 25.0%
! AATATCACTTTGATGTTTAC+CGG - chr1_4:73672635-73672654 Msa0184310:five_prime_UTR 25.0%
!!! TCGTCATATAATGTTTTTAC+CGG + chr1_4:73672657-73672676 None:intergenic 25.0%
!!! ATAATTTTTTGCTGCTGCTT+TGG + chr1_4:73664221-73664240 None:intergenic 30.0%
GAAAGAAAGAGAAGAGAAAA+AGG + chr1_4:73664317-73664336 None:intergenic 30.0%
CTTCTTCTTCTTCTTCTTAA+CGG - chr1_4:73664377-73664396 Msa0184310:three_prime_UTR 30.0%
! TGTAAACTTCAAGTTTCTGA+CGG + chr1_4:73664518-73664537 None:intergenic 30.0%
! CAACTTTTTGAACGGTAATT+TGG + chr1_4:73664682-73664701 None:intergenic 30.0%
!! ATTTCAAGTTCGTTTAGTAC+AGG - chr1_4:73665021-73665040 Msa0184310:intron 30.0%
TATCTACATCGAGTTCATAA+CGG + chr1_4:73665100-73665119 None:intergenic 30.0%
AGACTATTTCGGAAAACTAA+TGG - chr1_4:73665264-73665283 Msa0184310:three_prime_UTR 30.0%
GAGAACTTATGAAAATAAGC+TGG + chr1_4:73665339-73665358 None:intergenic 30.0%
TATCCCAATTCTTGTTGAAT+TGG - chr1_4:73665721-73665740 Msa0184310:intron 30.0%
GATGCATACCTGTTAAAATT+TGG + chr1_4:73665935-73665954 None:intergenic 30.0%
AAGAATTTATCACCTGACTA+AGG + chr1_4:73666450-73666469 None:intergenic 30.0%
!!! TTCTAGCCTTTTGATTTAGT+TGG - chr1_4:73666608-73666627 Msa0184310:three_prime_UTR 30.0%
AGTTCACCAACTAAATCAAA+AGG + chr1_4:73666617-73666636 None:intergenic 30.0%
ATAGCTCTTGCCAATTATTA+TGG - chr1_4:73666701-73666720 Msa0184310:intron 30.0%
CTTTCTTGCACATTCATATA+TGG + chr1_4:73666842-73666861 None:intergenic 30.0%
TGACAAAGGATCAAATTACT+TGG - chr1_4:73667162-73667181 Msa0184310:intron 30.0%
!!! ACCTTTTTTTACACAAACGA+TGG - chr1_4:73667304-73667323 Msa0184310:intron 30.0%
TCCATCGTTTGTGTAAAAAA+AGG + chr1_4:73667308-73667327 None:intergenic 30.0%
TGAAATGCATACATAGTCAA+GGG + chr1_4:73667400-73667419 None:intergenic 30.0%
! TGTCTTTTCCTTTTGTCATT+AGG - chr1_4:73667610-73667629 Msa0184310:intron 30.0%
! GTTGGAAAAGGAAATTTTGA+AGG - chr1_4:73667655-73667674 Msa0184310:intron 30.0%
!!! ATACAAAGTTCTAGGGTTTT+TGG - chr1_4:73667710-73667729 Msa0184310:intron 30.0%
!!! TACAAAGTTCTAGGGTTTTT+GGG - chr1_4:73667711-73667730 Msa0184310:intron 30.0%
GTACCTATTCAAGATTAAGA+AGG - chr1_4:73667769-73667788 Msa0184310:intron 30.0%
TTCCCTTCTTAATCTTGAAT+AGG + chr1_4:73667775-73667794 None:intergenic 30.0%
ATATGAAATACCCATTCTGT+AGG - chr1_4:73667936-73667955 Msa0184310:intron 30.0%
AGATATTGATCCTACAGAAT+GGG + chr1_4:73667949-73667968 None:intergenic 30.0%
GATCAATATCTGTCAAATCA+GGG - chr1_4:73667958-73667977 Msa0184310:intron 30.0%
ATGGTATTTGTATGCAATCA+GGG + chr1_4:73668032-73668051 None:intergenic 30.0%
AATGGTATTTGTATGCAATC+AGG + chr1_4:73668033-73668052 None:intergenic 30.0%
TGCATACAAATACCATTTGA+TGG - chr1_4:73668036-73668055 Msa0184310:intron 30.0%
!!! TTTTCATATTTTAGCTGGCT+GGG + chr1_4:73668083-73668102 None:intergenic 30.0%
TATGAAAACAAAGTTGGATC+TGG - chr1_4:73668095-73668114 Msa0184310:intron 30.0%
TTTATATCATGAGGTTTGTC+TGG - chr1_4:73668317-73668336 Msa0184310:intron 30.0%
!! TCTGGATAGTGGAATATAAT+TGG - chr1_4:73668335-73668354 Msa0184310:intron 30.0%
ACAAAGGATAAATGCAAGAA+GGG + chr1_4:73668415-73668434 None:intergenic 30.0%
AACAAAGGATAAATGCAAGA+AGG + chr1_4:73668416-73668435 None:intergenic 30.0%
! CATTTATCCTTTGTTATCTG+AGG - chr1_4:73668421-73668440 Msa0184310:intron 30.0%
TTTCTATCCTCAGATAACAA+AGG + chr1_4:73668431-73668450 None:intergenic 30.0%
TTGTTATCTGAGGATAGAAA+AGG - chr1_4:73668431-73668450 Msa0184310:intron 30.0%
ATTGGAGATTCATTATCTGT+TGG - chr1_4:73668619-73668638 Msa0184310:three_prime_UTR 30.0%
CAACAGATAGTTCAAAAAGA+AGG + chr1_4:73668730-73668749 None:intergenic 30.0%
! CTTCTTTTTGAACTATCTGT+TGG - chr1_4:73668728-73668747 Msa0184310:intron 30.0%
! ATTACCAAAGAGATTTTCTC+AGG - chr1_4:73668796-73668815 Msa0184310:intron 30.0%
AATCAAAGTATGCTTCAGTT+TGG + chr1_4:73668874-73668893 None:intergenic 30.0%
! ATATCTGAATCTGAAATGCA+TGG + chr1_4:73668929-73668948 None:intergenic 30.0%
ATTCTACAATGCCAATTTCA+GGG + chr1_4:73669137-73669156 None:intergenic 30.0%
CTAGATTATTAAAATGCCTG+GGG - chr1_4:73669157-73669176 Msa0184310:intron 30.0%
GACTTAATTTCAATCTTGGA+AGG - chr1_4:73669198-73669217 Msa0184310:intron 30.0%
CTTAATTTCAATCTTGGAAG+GGG - chr1_4:73669200-73669219 Msa0184310:intron 30.0%
!!! CCGAGTTAGTTTTAGTAATA+TGG - chr1_4:73669421-73669440 Msa0184310:CDS 30.0%
AAGAATGTTGTTCAGTTCAT+TGG - chr1_4:73669519-73669538 Msa0184310:intron 30.0%
GTAACAATACAAAGATTTGG+AGG + chr1_4:73669558-73669577 None:intergenic 30.0%
CCAGTAACAATACAAAGATT+TGG + chr1_4:73669561-73669580 None:intergenic 30.0%
CCAAATCTTTGTATTGTTAC+TGG - chr1_4:73669558-73669577 Msa0184310:intron 30.0%
TTGTATTGTTACTGGTAAGT+AGG - chr1_4:73669566-73669585 Msa0184310:intron 30.0%
! CGTTTCATACTTTAGTTCAA+AGG - chr1_4:73669621-73669640 Msa0184310:intron 30.0%
ACTCATATCAGTTAGAGATA+CGG - chr1_4:73670041-73670060 Msa0184310:intron 30.0%
ATGCAATACAAATAGGAACT+TGG + chr1_4:73670143-73670162 None:intergenic 30.0%
CTTTAATTGCTAAGATGATC+TGG - chr1_4:73670169-73670188 Msa0184310:intron 30.0%
AGCATCACAGTTGAATTATT+AGG + chr1_4:73670210-73670229 None:intergenic 30.0%
!!! ATGGCTACTTTTAGTAAAGA+TGG + chr1_4:73670313-73670332 None:intergenic 30.0%
!! GTCTATGTTTTTACTTCTGT+TGG - chr1_4:73670483-73670502 Msa0184310:intron 30.0%
AGGCAATACATTAGTGATAT+AGG + chr1_4:73670559-73670578 None:intergenic 30.0%
TGGGAAAGTAAAAAATGCAA+TGG + chr1_4:73670597-73670616 None:intergenic 30.0%
ATCAACTAGGAATTGAACAT+GGG + chr1_4:73670616-73670635 None:intergenic 30.0%
AATCAACTAGGAATTGAACA+TGG + chr1_4:73670617-73670636 None:intergenic 30.0%
TTCAAGAAAAATCATACCTC+AGG + chr1_4:73670940-73670959 None:intergenic 30.0%
AGTAAAACTGGTATTCAAAC+CGG - chr1_4:73671125-73671144 Msa0184310:intron 30.0%
ACCCTTAAAAATATTGTCCA+TGG - chr1_4:73671205-73671224 Msa0184310:intron 30.0%
!! CACCATGGACAATATTTTTA+AGG + chr1_4:73671210-73671229 None:intergenic 30.0%
! TTTTAAATTCTGCTTCACCA+TGG + chr1_4:73671225-73671244 None:intergenic 30.0%
!! ATCCAAACTCTAAAACTTCA+AGG + chr1_4:73671516-73671535 None:intergenic 30.0%
TAACCTTCAAGTCAAATCAA+CGG + chr1_4:73671635-73671654 None:intergenic 30.0%
TTTGTATTCTTTCCTCTTTG+CGG - chr1_4:73671910-73671929 Msa0184310:intron 30.0%
CAATAAAATTATCCGCAAAG+AGG + chr1_4:73671925-73671944 None:intergenic 30.0%
TTACACACAATAACTCTATG+TGG - chr1_4:73671960-73671979 Msa0184310:CDS 30.0%
! ATGTGGCTTAAATTGCTATT+AGG - chr1_4:73671977-73671996 Msa0184310:CDS 30.0%
! TGTGGCTTAAATTGCTATTA+GGG - chr1_4:73671978-73671997 Msa0184310:CDS 30.0%
! TAAATTGCTATTAGGGTCTA+CGG - chr1_4:73671985-73672004 Msa0184310:CDS 30.0%
!!! TGTGTATTTTTGGGAATTGT+AGG + chr1_4:73672011-73672030 None:intergenic 30.0%
TGTAGTAGTTCAGAAATTCT+TGG + chr1_4:73672035-73672054 None:intergenic 30.0%
TCAATTATTTCAGAAAAGGC+TGG + chr1_4:73672089-73672108 None:intergenic 30.0%
ATTGTTAAATAGGCACAACT+TGG + chr1_4:73672197-73672216 None:intergenic 30.0%
! TTTTCTGTTTCATGTTTGTC+AGG - chr1_4:73672216-73672235 Msa0184310:intron 30.0%
CATAAAGATAAGTCATCACA+CGG - chr1_4:73672256-73672275 Msa0184310:intron 30.0%
AACCAAACTCAATTGATCTT+TGG + chr1_4:73672388-73672407 None:intergenic 30.0%
AGACTGTGCCAAAAAAATTA+AGG + chr1_4:73672450-73672469 None:intergenic 30.0%
CTGAATAACAATAGTTGAGA+GGG + chr1_4:73672490-73672509 None:intergenic 30.0%
TCTGAATAACAATAGTTGAG+AGG + chr1_4:73672491-73672510 None:intergenic 30.0%
!!! GTTTACCACGTTTTTTGAAT+TGG - chr1_4:73672584-73672603 Msa0184310:five_prime_UTR 30.0%
TCAAAGTGATATTGGATACA+GGG + chr1_4:73672628-73672647 None:intergenic 30.0%
ATCAAAGTGATATTGGATAC+AGG + chr1_4:73672629-73672648 None:intergenic 30.0%
GGTAAACATCAAAGTGATAT+TGG + chr1_4:73672636-73672655 None:intergenic 30.0%
! TCTGAAATTGAATTACACGT+AGG + chr1_4:73672718-73672737 None:intergenic 30.0%
!!! GTTGACGAGAAACTGTTTTT+TGG + chr1_4:73664255-73664274 None:intergenic 35.0%
ATGAGAGAATGAAAACCTAG+CGG + chr1_4:73664634-73664653 None:intergenic 35.0%
TTCAATGATTGCTACTGCAT+AGG - chr1_4:73664906-73664925 Msa0184310:three_prime_UTR 35.0%
ACTAAACGAACTTGAAATGC+AGG + chr1_4:73665019-73665038 None:intergenic 35.0%
ACTCGATGTAGATAACTAAC+TGG - chr1_4:73665106-73665125 Msa0184310:intron 35.0%
GGAATCAGCATCTTTATAAG+TGG - chr1_4:73665163-73665182 Msa0184310:intron 35.0%
ACTTATTTGAGCTTATCTCC+TGG - chr1_4:73665228-73665247 Msa0184310:three_prime_UTR 35.0%
AGTCTCAAAAAACTTATGCC+AGG + chr1_4:73665249-73665268 None:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + chr1_4:73665361-73665380 None:intergenic 35.0%
! ATACAGGTATATCCTTTTGC+TGG - chr1_4:73665540-73665559 Msa0184310:intron 35.0%
! TTATGATTTGCACCAGCAAA+AGG + chr1_4:73665555-73665574 None:intergenic 35.0%
!! TATTCTTTAAAGCAGGGGTA+TGG - chr1_4:73665633-73665652 Msa0184310:intron 35.0%
GGACCAATTCAACAAGAATT+GGG + chr1_4:73665727-73665746 None:intergenic 35.0%
!! GTGTGATGCCAAATTTTAAC+AGG - chr1_4:73665924-73665943 Msa0184310:intron 35.0%
! AAATTTCACGTCCTTTTGGT+AGG - chr1_4:73666118-73666137 Msa0184310:intron 35.0%
! AATTTCACGTCCTTTTGGTA+GGG - chr1_4:73666119-73666138 Msa0184310:intron 35.0%
CTGTATTAATACGACTGACA+AGG - chr1_4:73666225-73666244 Msa0184310:intron 35.0%
! ATGAAGGCTCACTATTTTCA+GGG - chr1_4:73666266-73666285 Msa0184310:intron 35.0%
AGGCTTGTCAATTGTTGAAA+AGG + chr1_4:73666422-73666441 None:intergenic 35.0%
! GTTTCTCTCTAGTTTCTGAA+TGG + chr1_4:73666745-73666764 None:intergenic 35.0%
ATGTAAATATTACCAGGCAG+TGG + chr1_4:73666881-73666900 None:intergenic 35.0%
GGTTGCATGTAAATATTACC+AGG + chr1_4:73666887-73666906 None:intergenic 35.0%
GATCGACTGAAATAGACTAA+AGG + chr1_4:73667031-73667050 None:intergenic 35.0%
CTGAAATGCATACATAGTCA+AGG + chr1_4:73667401-73667420 None:intergenic 35.0%
! ACTTCAATACTTGGTGAGAT+TGG - chr1_4:73667424-73667443 Msa0184310:intron 35.0%
CTCAGTTTCCTAATGACAAA+AGG + chr1_4:73667621-73667640 None:intergenic 35.0%
! CTTTTGTCATTAGGAAACTG+AGG - chr1_4:73667619-73667638 Msa0184310:intron 35.0%
!!! ACAAAGTTCTAGGGTTTTTG+GGG - chr1_4:73667712-73667731 Msa0184310:intron 35.0%
!! TCTTGCTAGCTTTGATATGA+TGG - chr1_4:73667747-73667766 Msa0184310:intron 35.0%
GAAGATGATAATCTGCAGTT+TGG - chr1_4:73667792-73667811 Msa0184310:intron 35.0%
CAGATATTGATCCTACAGAA+TGG + chr1_4:73667950-73667969 None:intergenic 35.0%
GGATCAATATCTGTCAAATC+AGG - chr1_4:73667957-73667976 Msa0184310:intron 35.0%
!! AGTCTGGTATTGATCATTTG+AGG + chr1_4:73667995-73668014 None:intergenic 35.0%
CAAATGATCAATACCAGACT+AGG - chr1_4:73667995-73668014 Msa0184310:intron 35.0%
TGGTATTTGTATGCAATCAG+GGG + chr1_4:73668031-73668050 None:intergenic 35.0%
!!! GTTTTCATATTTTAGCTGGC+TGG + chr1_4:73668084-73668103 None:intergenic 35.0%
AAAGTTGGATCTGGATCATT+TGG - chr1_4:73668104-73668123 Msa0184310:intron 35.0%
CAAGTGAAAAACGTAAAGAG+AGG + chr1_4:73668193-73668212 None:intergenic 35.0%
ATATCTGTACTTATGCGTTC+AGG + chr1_4:73668274-73668293 None:intergenic 35.0%
CACAGGAAGTTTATATCATG+AGG - chr1_4:73668308-73668327 Msa0184310:intron 35.0%
!! GGATAGTGGAATATAATTGG+TGG - chr1_4:73668338-73668357 Msa0184310:intron 35.0%
!!! TTGATTTTTTGCCTGCAACT+AGG + chr1_4:73668664-73668683 None:intergenic 35.0%
! CCAAAGGTATAAAGTACAAG+AGG + chr1_4:73668688-73668707 None:intergenic 35.0%
CCTCTTGTACTTTATACCTT+TGG - chr1_4:73668685-73668704 Msa0184310:three_prime_UTR 35.0%
TGTTGGAAAATCAACATGCA+CGG - chr1_4:73668745-73668764 Msa0184310:intron 35.0%
ATGCCAAATGAAGCATACTT+TGG - chr1_4:73669023-73669042 Msa0184310:intron 35.0%
CAACCAAAGTATGCTTCATT+TGG + chr1_4:73669029-73669048 None:intergenic 35.0%
! GAAGATTGATTCCCTGAAAT+TGG - chr1_4:73669123-73669142 Msa0184310:intron 35.0%
GATTCTACAATGCCAATTTC+AGG + chr1_4:73669138-73669157 None:intergenic 35.0%
ATGGAGGATACCACAAAATT+TGG + chr1_4:73669313-73669332 None:intergenic 35.0%
!! CATTCAGAAGTATTTGATGG+AGG + chr1_4:73669329-73669348 None:intergenic 35.0%
AATTGTCGTGTAGATCTACA+AGG + chr1_4:73669450-73669469 None:intergenic 35.0%
! CAAACAAATTCTAGAAAGGG+AGG + chr1_4:73669793-73669812 None:intergenic 35.0%
! GGCAAAGTATTTACATTGCT+TGG - chr1_4:73669851-73669870 Msa0184310:intron 35.0%
AAAAACATACACTCATGCTC+AGG + chr1_4:73669918-73669937 None:intergenic 35.0%
GTACTCGATGCAATACAAAT+AGG + chr1_4:73670150-73670169 None:intergenic 35.0%
! TGATTTTCTGCACAGACAAA+AGG - chr1_4:73670273-73670292 Msa0184310:intron 35.0%
! GATTTTCTGCACAGACAAAA+GGG - chr1_4:73670274-73670293 Msa0184310:intron 35.0%
! ATTTTCGTCCATCAGAAGAT+TGG + chr1_4:73670401-73670420 None:intergenic 35.0%
AGTATCAATGTGTGCATTCA+TGG + chr1_4:73670438-73670457 None:intergenic 35.0%
TATTGCCTATCTCGATTGTT+GGG - chr1_4:73670571-73670590 Msa0184310:intron 35.0%
ATATCATTGTGCAAAGCGAT+TGG - chr1_4:73670994-73671013 Msa0184310:intron 35.0%
TATCATTGTGCAAAGCGATT+GGG - chr1_4:73670995-73671014 Msa0184310:intron 35.0%
!! GTTTGGATATTTTTCAGCAG+TGG - chr1_4:73671023-73671042 Msa0184310:CDS 35.0%
! GGTGAAGCAGAATTTAAAAC+TGG - chr1_4:73671226-73671245 Msa0184310:intron 35.0%
!!! TGCCTTGAAGTTTTAGAGTT+TGG - chr1_4:73671511-73671530 Msa0184310:intron 35.0%
!! TTTCCGTTGATTTGACTTGA+AGG - chr1_4:73671629-73671648 Msa0184310:intron 35.0%
! AAGGCAGATGTTTTCAGTTT+TGG - chr1_4:73671678-73671697 Msa0184310:intron 35.0%
GAATTTCTGAACTACTACAG+CGG - chr1_4:73672036-73672055 Msa0184310:intron 35.0%
!! TTACCTCTTTTGCTATGTGT+TGG + chr1_4:73672118-73672137 None:intergenic 35.0%
ATGGGTATCAATATCAGTGA+TGG + chr1_4:73672306-73672325 None:intergenic 35.0%
GACCAAAGATCAATTGAGTT+TGG - chr1_4:73672383-73672402 Msa0184310:CDS 35.0%
! ATTGTTATTCAGAAGCGAGT+AGG - chr1_4:73672498-73672517 Msa0184310:exon 35.0%
AAACGTGGTAAACAAAGCAA+AGG + chr1_4:73672577-73672596 None:intergenic 35.0%
AAGCTCCAATTCAAAAAACG+TGG + chr1_4:73672592-73672611 None:intergenic 35.0%
CAAAGTGATATTGGATACAG+GGG + chr1_4:73672627-73672646 None:intergenic 35.0%
TGTACAAGGCTTGATAGATT+TGG - chr1_4:73672687-73672706 Msa0184310:five_prime_UTR 35.0%
!!! TTTTGCTGCTGCTTTGGAAT+TGG + chr1_4:73664215-73664234 None:intergenic 40.0%
TGAGAGAATGAAAACCTAGC+GGG + chr1_4:73664633-73664652 None:intergenic 40.0%
AGACTCGTACAAAATCACTC+TGG + chr1_4:73664887-73664906 None:intergenic 40.0%
GTATGCATTGGATGTGAATG+TGG - chr1_4:73664928-73664947 Msa0184310:three_prime_UTR 40.0%
TCATAAGAGATTGCTCGAGT+TGG - chr1_4:73664973-73664992 Msa0184310:intron 40.0%
GCATAGTGGTATGTTCTGTA+TGG - chr1_4:73665201-73665220 Msa0184310:intron 40.0%
! AATCAATCTAAGGCCCTGTT+TGG + chr1_4:73665501-73665520 None:intergenic 40.0%
TGTGCATCATCTTTCTCAGA+AGG + chr1_4:73665600-73665619 None:intergenic 40.0%
GGGACCAATTCAACAAGAAT+TGG + chr1_4:73665728-73665747 None:intergenic 40.0%
TTAGAGGAAGAACCAAACGT+AGG + chr1_4:73665842-73665861 None:intergenic 40.0%
TATGAAGTGCAAGAGCTTCA+AGG + chr1_4:73665865-73665884 None:intergenic 40.0%
TGAAGACGGAGACAATACTA+TGG - chr1_4:73665901-73665920 Msa0184310:intron 40.0%
GAAGACGGAGACAATACTAT+GGG - chr1_4:73665902-73665921 Msa0184310:intron 40.0%
! ATTTCACGTCCTTTTGGTAG+GGG - chr1_4:73666120-73666139 Msa0184310:intron 40.0%
CTAAATGTTCCCCTACCAAA+AGG + chr1_4:73666132-73666151 None:intergenic 40.0%
! CATGAAGGCTCACTATTTTC+AGG - chr1_4:73666265-73666284 Msa0184310:intron 40.0%
! TGAAGGCTCACTATTTTCAG+GGG - chr1_4:73666267-73666286 Msa0184310:intron 40.0%
GAAAAGGTAATCTCGTGCAT+GGG + chr1_4:73666406-73666425 None:intergenic 40.0%
TGAAAAGGTAATCTCGTGCA+TGG + chr1_4:73666407-73666426 None:intergenic 40.0%
ATCACCTGACTAAGGAGTTT+AGG + chr1_4:73666442-73666461 None:intergenic 40.0%
!! GCTATTTGCTATCATCGTGT+TGG + chr1_4:73666580-73666599 None:intergenic 40.0%
CTTCTTGCAAATTGCTATGC+TGG - chr1_4:73666635-73666654 Msa0184310:three_prime_UTR 40.0%
GTTTGACATGCACTATGACA+TGG - chr1_4:73667230-73667249 Msa0184310:intron 40.0%
! CGCTTTTATCCTACCTCATT+AGG + chr1_4:73667526-73667545 None:intergenic 40.0%
AGTAGAAGCAAGATGCTATG+TGG + chr1_4:73667591-73667610 None:intergenic 40.0%
TAGGAAACTGAGGAGCTTAA+AGG - chr1_4:73667629-73667648 Msa0184310:intron 40.0%
! GCTTAAAGGTGTGTTGGAAA+AGG - chr1_4:73667643-73667662 Msa0184310:intron 40.0%
!! TGCAGTTTGGCTTGCAAAAA+AGG - chr1_4:73667805-73667824 Msa0184310:intron 40.0%
TGATCAATACCAGACTAGGA+TGG - chr1_4:73667999-73668018 Msa0184310:intron 40.0%
TATTTGTATGCAATCAGGGG+AGG + chr1_4:73668028-73668047 None:intergenic 40.0%
ATTTGATGGAGCTGATGTCT+GGG - chr1_4:73668050-73668069 Msa0184310:intron 40.0%
ACTTGACTTCGTAGATTCAG+AGG - chr1_4:73668208-73668227 Msa0184310:intron 40.0%
CAGTTATTGCAGTCAAGATG+TGG - chr1_4:73668231-73668250 Msa0184310:intron 40.0%
TATGCTGAAAGAGTTTGCAC+AGG - chr1_4:73668291-73668310 Msa0184310:intron 40.0%
ATAAATGCAAGAAGGGAAGG+TGG + chr1_4:73668408-73668427 None:intergenic 40.0%
AGGATAAATGCAAGAAGGGA+AGG + chr1_4:73668411-73668430 None:intergenic 40.0%
AGACATTTCTTCCTAGTTGC+AGG - chr1_4:73668650-73668669 Msa0184310:three_prime_UTR 40.0%
AGAGCACAAAGATTTGTGTC+AGG + chr1_4:73668775-73668794 None:intergenic 40.0%
AGAGCCTGAGAAAATCTCTT+TGG + chr1_4:73668803-73668822 None:intergenic 40.0%
TATTAAAATGCCTGGGGTCA+AGG - chr1_4:73669163-73669182 Msa0184310:intron 40.0%
ACACATTCTCCTTTCCTGAA+TGG + chr1_4:73669272-73669291 None:intergenic 40.0%
TATGACTTATCTTTGGCTGC+AGG - chr1_4:73669484-73669503 Msa0184310:CDS 40.0%
! AGTTCATTGGTGCTTGTACT+CGG - chr1_4:73669532-73669551 Msa0184310:intron 40.0%
TTGTTACTGGTAAGTAGGAG+AGG - chr1_4:73669571-73669590 Msa0184310:intron 40.0%
TTACTACACTGTTACTGCGT+CGG - chr1_4:73669675-73669694 Msa0184310:intron 40.0%
ATGTATGCAGTATCCACCAT+CGG + chr1_4:73669727-73669746 None:intergenic 40.0%
ACAAGGCTTCCAACATTGTA+GGG + chr1_4:73669764-73669783 None:intergenic 40.0%
! TCTGAAGCATGGACAAATGT+GGG + chr1_4:73669981-73670000 None:intergenic 40.0%
! ATCTGAAGCATGGACAAATG+TGG + chr1_4:73669982-73670001 None:intergenic 40.0%
GTTTCAGAGTTTATGTCGAG+AGG - chr1_4:73670241-73670260 Msa0184310:intron 40.0%
AGTAGCCATTGATGTTTCCA+AGG - chr1_4:73670324-73670343 Msa0184310:intron 40.0%
GTAGCCATTGATGTTTCCAA+GGG - chr1_4:73670325-73670344 Msa0184310:intron 40.0%
CATTCCCTTGGAAACATCAA+TGG + chr1_4:73670332-73670351 None:intergenic 40.0%
GTGCAAATAGTTCATTCCCT+TGG + chr1_4:73670344-73670363 None:intergenic 40.0%
GTGATATAGGATTGCAACTG+AGG + chr1_4:73670546-73670565 None:intergenic 40.0%
GTATTGCCTATCTCGATTGT+TGG - chr1_4:73670570-73670589 Msa0184310:intron 40.0%
! TTCGAGATGAGTTGCAGTTT+TGG + chr1_4:73670706-73670725 None:intergenic 40.0%
AGAGCATATCCTTCAACAGT+TGG - chr1_4:73670828-73670847 Msa0184310:intron 40.0%
TATCCTTCAACAGTTGGTCA+AGG - chr1_4:73670834-73670853 Msa0184310:intron 40.0%
!!! TTGGTCAAGGTTGCTGATTT+TGG - chr1_4:73670847-73670866 Msa0184310:intron 40.0%
!!! TGGTCAAGGTTGCTGATTTT+GGG - chr1_4:73670848-73670867 Msa0184310:intron 40.0%
AAAGCGATTGGGTGATAGTT+TGG - chr1_4:73671006-73671025 Msa0184310:CDS 40.0%
AATGCATTACATGCTTGGCA+AGG + chr1_4:73671423-73671442 None:intergenic 40.0%
ACACAAACCATATGACCAGA+AGG - chr1_4:73671659-73671678 Msa0184310:intron 40.0%
AACTGAAAACATCTGCCTTC+TGG + chr1_4:73671677-73671696 None:intergenic 40.0%
!!! TCAGTTTTGGAATAGCACTC+TGG - chr1_4:73671691-73671710 Msa0184310:intron 40.0%
!!! CAGTTTTGGAATAGCACTCT+GGG - chr1_4:73671692-73671711 Msa0184310:intron 40.0%
AATGGGGTCAAGTAAGAGTA+AGG + chr1_4:73671861-73671880 None:intergenic 40.0%
TCTCCAACACATAGCAAAAG+AGG - chr1_4:73672112-73672131 Msa0184310:intron 40.0%
TGATACCCATATAAGAGCAG+TGG - chr1_4:73672316-73672335 Msa0184310:CDS 40.0%
AACCACCACTGCTCTTATAT+GGG + chr1_4:73672324-73672343 None:intergenic 40.0%
TCAGACTGTACAGGACAAAA+AGG + chr1_4:73672365-73672384 None:intergenic 40.0%
TTATTCAGAAGCGAGTAGGA+CGG - chr1_4:73672502-73672521 Msa0184310:exon 40.0%
CAGTGGTGGTTGAAAATTCA+AGG - chr1_4:73672534-73672553 Msa0184310:five_prime_UTR 40.0%
!! CTGCTGCTTTGGAATTGGAT+TGG + chr1_4:73664210-73664229 None:intergenic 45.0%
GAGAACGACATTGAGAGTTG+CGG - chr1_4:73664453-73664472 Msa0184310:three_prime_UTR 45.0%
! CTTCAAGTTTCTGACGGTGA+TGG + chr1_4:73664512-73664531 None:intergenic 45.0%
!! AACAAGAGCGTCTTCGCAAT+CGG + chr1_4:73664568-73664587 None:intergenic 45.0%
! CAGAGTTGATCATCGAAACC+AGG + chr1_4:73664591-73664610 None:intergenic 45.0%
CTGGTTTCGATGATCAACTC+TGG - chr1_4:73664589-73664608 Msa0184310:three_prime_UTR 45.0%
GCTACTGCATAGGTATGCAT+TGG - chr1_4:73664916-73664935 Msa0184310:three_prime_UTR 45.0%
TGAAATGCAGGACGATTTGC+AGG + chr1_4:73665007-73665026 None:intergenic 45.0%
ATTCATCCACCACCTACGTT+TGG - chr1_4:73665827-73665846 Msa0184310:intron 45.0%
TGCAAGAGCTTCAAGGTTAG+AGG + chr1_4:73665858-73665877 None:intergenic 45.0%
!! GAAGGCTCACTATTTTCAGG+GGG - chr1_4:73666268-73666287 Msa0184310:intron 45.0%
CAAGCCTAAACTCCTTAGTC+AGG - chr1_4:73666435-73666454 Msa0184310:intron 45.0%
GACGCAGCGTCCATAATAAT+TGG + chr1_4:73666714-73666733 None:intergenic 45.0%
CATGATTGAATACCACTGCC+TGG - chr1_4:73666866-73666885 Msa0184310:intron 45.0%
! ATGCGTTTTCCACCTCTGAT+GGG - chr1_4:73667467-73667486 Msa0184310:intron 45.0%
! TGAGGAGCTTAAAGGTGTGT+TGG - chr1_4:73667637-73667656 Msa0184310:intron 45.0%
CAGACATCAGCTCCATCAAA+TGG + chr1_4:73668051-73668070 None:intergenic 45.0%
CATTTGATGGAGCTGATGTC+TGG - chr1_4:73668049-73668068 Msa0184310:intron 45.0%
CATGAGGTTTGTCTGGATAG+TGG - chr1_4:73668324-73668343 Msa0184310:intron 45.0%
CAGTTAGAACAGCTTTGCAG+AGG + chr1_4:73668840-73668859 None:intergenic 45.0%
GTAACCTTGTCCTTGCATCA+AGG + chr1_4:73669659-73669678 None:intergenic 45.0%
CTTCCAACATTGTAGGGTGT+GGG + chr1_4:73669758-73669777 None:intergenic 45.0%
CACAAGGCTTCCAACATTGT+AGG + chr1_4:73669765-73669784 None:intergenic 45.0%
AAGCCCAAAAGCTAGCTCAA+GGG + chr1_4:73669888-73669907 None:intergenic 45.0%
TGTCCATGCTTCAGATGTCT+AGG - chr1_4:73669986-73670005 Msa0184310:intron 45.0%
!!! CACCCATTGAGCTAGCTTTT+GGG - chr1_4:73670095-73670114 Msa0184310:intron 45.0%
!!! ACCCATTGAGCTAGCTTTTG+GGG - chr1_4:73670096-73670115 Msa0184310:intron 45.0%
ACCCCAAAAGCTAGCTCAAT+GGG + chr1_4:73670100-73670119 None:intergenic 45.0%
AACCCCAAAAGCTAGCTCAA+TGG + chr1_4:73670101-73670120 None:intergenic 45.0%
!!! CTAGCTTTTGGGGTTGAGTT+GGG - chr1_4:73670106-73670125 Msa0184310:intron 45.0%
TCAGAAGATTGGCAGTCTTG+AGG + chr1_4:73670390-73670409 None:intergenic 45.0%
CAAGACTGCCAATCTTCTGA+TGG - chr1_4:73670390-73670409 Msa0184310:intron 45.0%
AATGGCCCAACAATCGAGAT+AGG + chr1_4:73670579-73670598 None:intergenic 45.0%
CAACCTTGACCAACTGTTGA+AGG + chr1_4:73670840-73670859 None:intergenic 45.0%
!!! GGTCAAGGTTGCTGATTTTG+GGG - chr1_4:73670849-73670868 Msa0184310:intron 45.0%
GCGACAATGCATTACATGCT+TGG + chr1_4:73671428-73671447 None:intergenic 45.0%
ACATCTGCCTTCTGGTCATA+TGG + chr1_4:73671669-73671688 None:intergenic 45.0%
TCAAGTAAGAGTAAGGCAGC+TGG + chr1_4:73671854-73671873 None:intergenic 45.0%
! ACCAACTGCTGCTTGTAATG+GGG + chr1_4:73671877-73671896 None:intergenic 45.0%
! CACCAACTGCTGCTTGTAAT+GGG + chr1_4:73671878-73671897 None:intergenic 45.0%
! ACACCAACTGCTGCTTGTAA+TGG + chr1_4:73671879-73671898 None:intergenic 45.0%
! ATTACAAGCAGCAGTTGGTG+TGG - chr1_4:73671878-73671897 Msa0184310:intron 45.0%
ACGGTTTCCTCTCATCACTT+AGG - chr1_4:73672275-73672294 Msa0184310:intron 45.0%
TACCCATATAAGAGCAGTGG+TGG - chr1_4:73672319-73672338 Msa0184310:CDS 45.0%
CAACCACCACTGCTCTTATA+TGG + chr1_4:73672325-73672344 None:intergenic 45.0%
GATCTTTGGTCAGACTGTAC+AGG + chr1_4:73672374-73672393 None:intergenic 45.0%
AGGCAATAGCAGAGTAGAAC+AGG + chr1_4:73672430-73672449 None:intergenic 45.0%
ACGATGTCACGAGATGTACA+AGG - chr1_4:73672673-73672692 Msa0184310:five_prime_UTR 45.0%
!! AAAAGAAAAAAAAAAAAAAA+AGG + chr1_4:73671358-73671377 None:intergenic 5.0%
TTGTTACGCTCGCTCTCTCA+TGG - chr1_4:73664425-73664444 Msa0184310:three_prime_UTR 50.0%
ACTTCAATCGTCTTCCCGCT+AGG - chr1_4:73664616-73664635 Msa0184310:three_prime_UTR 50.0%
GAAGAACCAAACGTAGGTGG+TGG + chr1_4:73665836-73665855 None:intergenic 50.0%
GAGGAAGAACCAAACGTAGG+TGG + chr1_4:73665839-73665858 None:intergenic 50.0%
! CATGCGTTTTCCACCTCTGA+TGG - chr1_4:73667466-73667485 Msa0184310:intron 50.0%
ATCCAGGGAAAACCCATCAG+AGG + chr1_4:73667482-73667501 None:intergenic 50.0%
CTCAACGACGAAGACATCCA+GGG + chr1_4:73667497-73667516 None:intergenic 50.0%
CTGGATGTCTTCGTCGTTGA+GGG - chr1_4:73667496-73667515 Msa0184310:intron 50.0%
ATGTCTTCGTCGTTGAGGGA+TGG - chr1_4:73667500-73667519 Msa0184310:intron 50.0%
CTTGTCTGCTACGACCATTC+AGG - chr1_4:73669255-73669274 Msa0184310:intron 50.0%
CTGCTACGACCATTCAGGAA+AGG - chr1_4:73669260-73669279 Msa0184310:intron 50.0%
ACACTGTTACTGCGTCGGAA+TGG - chr1_4:73669680-73669699 Msa0184310:intron 50.0%
GGTTTAGCAACCTCTTCCGA+TGG - chr1_4:73669708-73669727 Msa0184310:intron 50.0%
TTAGCAACCTCTTCCGATGG+TGG - chr1_4:73669711-73669730 Msa0184310:intron 50.0%
CAACATTGTAGGGTGTGGGA+GGG + chr1_4:73669754-73669773 None:intergenic 50.0%
GCTTCCAACATTGTAGGGTG+TGG + chr1_4:73669759-73669778 None:intergenic 50.0%
AAAAGCTAGCTCAAGGGGTG+AGG + chr1_4:73669882-73669901 None:intergenic 50.0%
!!! TCACCCCTTGAGCTAGCTTT+TGG - chr1_4:73669881-73669900 Msa0184310:intron 50.0%
!!! CACCCCTTGAGCTAGCTTTT+GGG - chr1_4:73669882-73669901 Msa0184310:intron 50.0%
AGCCCAAAAGCTAGCTCAAG+GGG + chr1_4:73669887-73669906 None:intergenic 50.0%
CAAGCCCAAAAGCTAGCTCA+AGG + chr1_4:73669889-73669908 None:intergenic 50.0%
!!! CTTGAGCTAGCTTTTGGGCT+TGG - chr1_4:73669887-73669906 Msa0184310:intron 50.0%
GAAGCATGGACAAATGTGGG+TGG + chr1_4:73669978-73669997 None:intergenic 50.0%
! TGGCCTAGACATCTGAAGCA+TGG + chr1_4:73669992-73670011 None:intergenic 50.0%
AGGCCATACACCTTAGTGTG+AGG - chr1_4:73670006-73670025 Msa0184310:intron 50.0%
GGCCATACACCTTAGTGTGA+GGG - chr1_4:73670007-73670026 Msa0184310:intron 50.0%
GCCATACACCTTAGTGTGAG+GGG - chr1_4:73670008-73670027 Msa0184310:intron 50.0%
CCATACACCTTAGTGTGAGG+GGG - chr1_4:73670009-73670028 Msa0184310:intron 50.0%
CATCAAACCCCCTCACACTA+AGG + chr1_4:73670019-73670038 None:intergenic 50.0%
CCAAAAGCTAGCTCAATGGG+TGG + chr1_4:73670097-73670116 None:intergenic 50.0%
!!! CCACCCATTGAGCTAGCTTT+TGG - chr1_4:73670094-73670113 Msa0184310:intron 50.0%
!!! GCTAGCTTTTGGGGTTGAGT+TGG - chr1_4:73670105-73670124 Msa0184310:intron 50.0%
TCCAGACTGAGTTTGCACTC+TGG + chr1_4:73670878-73670897 None:intergenic 50.0%
GGAGTGATGACAGCTGAAAC+TGG - chr1_4:73670895-73670914 Msa0184310:intron 50.0%
CTGAAACTGGAACATACCGC+TGG - chr1_4:73670908-73670927 Msa0184310:intron 50.0%
AACTGGAACATACCGCTGGA+TGG - chr1_4:73670912-73670931 Msa0184310:intron 50.0%
!! GCACTCTGGGAGCTTTTAAC+TGG - chr1_4:73671705-73671724 Msa0184310:intron 50.0%
!! CTGGGAGCTTTTAACTGGAG+AGG - chr1_4:73671710-73671729 Msa0184310:intron 50.0%
ACCCCATTACAAGCAGCAGT+TGG - chr1_4:73671873-73671892 Msa0184310:intron 50.0%
! GTGCTGGCAACAAGATCCAA+AGG - chr1_4:73672058-73672077 Msa0184310:intron 50.0%
!! GAAAAGGCTGGTCTCTCCTT+TGG + chr1_4:73672077-73672096 None:intergenic 50.0%
TTCCTCTCATCACTTAGGCG+TGG - chr1_4:73672280-73672299 Msa0184310:intron 50.0%
TGAGAGTTGCGGAAGCAGAG+CGG - chr1_4:73664464-73664483 Msa0184310:three_prime_UTR 55.0%
! AGTTTCTGACGGTGATGGCG+AGG + chr1_4:73664507-73664526 None:intergenic 55.0%
TGCGAAGACGCTCTTGTTCC+TGG - chr1_4:73664570-73664589 Msa0184310:three_prime_UTR 55.0%
CAGGGAAAACCCATCAGAGG+TGG + chr1_4:73667479-73667498 None:intergenic 55.0%
!!! CACCTCTGATGGGTTTTCCC+TGG - chr1_4:73667477-73667496 Msa0184310:intron 55.0%
CCTCAACGACGAAGACATCC+AGG + chr1_4:73667498-73667517 None:intergenic 55.0%
CCTGGATGTCTTCGTCGTTG+AGG - chr1_4:73667495-73667514 Msa0184310:intron 55.0%
CGTTGAGGGATGGCCTAATG+AGG - chr1_4:73667510-73667529 Msa0184310:intron 55.0%
GAGGGATGGCCTAATGAGGT+AGG - chr1_4:73667514-73667533 Msa0184310:intron 55.0%
GGGAGGATTCCATCCTAGTC+TGG + chr1_4:73668011-73668030 None:intergenic 55.0%
CGAGCCTTGATGCAAGGACA+AGG - chr1_4:73669652-73669671 Msa0184310:intron 55.0%
! TACTGCGTCGGAATGGACTC+TGG - chr1_4:73669687-73669706 Msa0184310:intron 55.0%
GCAGTATCCACCATCGGAAG+AGG + chr1_4:73669721-73669740 None:intergenic 55.0%
CCAACATTGTAGGGTGTGGG+AGG + chr1_4:73669755-73669774 None:intergenic 55.0%
CCTCCCACACCCTACAATGT+TGG - chr1_4:73669752-73669771 Msa0184310:intron 55.0%
AGAAAGGGAGGCTGTGCACA+AGG + chr1_4:73669781-73669800 None:intergenic 55.0%
CCCCCTCACACTAAGGTGTA+TGG + chr1_4:73670012-73670031 None:intergenic 55.0%
GCCAGAGTGCAAACTCAGTC+TGG - chr1_4:73670874-73670893 Msa0184310:intron 55.0%
ATACCTCAGGAGCCATCCAG+CGG + chr1_4:73670927-73670946 None:intergenic 55.0%
TCAGGGGGGAAGACTTTGTG+TGG - chr1_4:73671080-73671099 Msa0184310:CDS 55.0%
CAGGGGGGAAGACTTTGTGT+GGG - chr1_4:73671081-73671100 Msa0184310:CDS 55.0%
AGGGGGGAAGACTTTGTGTG+GGG - chr1_4:73671082-73671101 Msa0184310:CDS 55.0%
! AGCAGTTGGTGTGGTGCAGA+AGG - chr1_4:73671887-73671906 Msa0184310:intron 55.0%
CTGAACTACTACAGCGGTGC+TGG - chr1_4:73672042-73672061 Msa0184310:intron 55.0%
TAGGACGGATGCAAGAGCAG+TGG - chr1_4:73672517-73672536 Msa0184310:five_prime_UTR 55.0%
GAGCTGCGAGCCTTGATGCA+AGG - chr1_4:73669646-73669665 Msa0184310:intron 60.0%
ATACCGCTGGATGGCTCCTG+AGG - chr1_4:73670921-73670940 Msa0184310:intron 60.0%
GGCCACGCCTAAGTGATGAG+AGG + chr1_4:73672285-73672304 None:intergenic 60.0%
GACGGATGCAAGAGCAGTGG+TGG - chr1_4:73672520-73672539 Msa0184310:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 73664188 73672760 73664188 ID=Msa0184310;Name=Msa0184310
chr1_4 mRNA 73664188 73672760 73664188 ID=Msa0184310-mRNA-1;Parent=Msa0184310;Name=Msa0184310-mRNA-1;_AED=0.24;_eAED=0.24;_QI=256|0.93|0.87|1|0.86|0.81|16|1287|274
chr1_4 exon 73664188 73664710 73664188 ID=Msa0184310-mRNA-1:exon:25110;Parent=Msa0184310-mRNA-1
chr1_4 exon 73664815 73664949 73664815 ID=Msa0184310-mRNA-1:exon:25109;Parent=Msa0184310-mRNA-1
chr1_4 exon 73665040 73665093 73665040 ID=Msa0184310-mRNA-1:exon:25108;Parent=Msa0184310-mRNA-1
chr1_4 exon 73665217 73665297 73665217 ID=Msa0184310-mRNA-1:exon:25107;Parent=Msa0184310-mRNA-1
chr1_4 exon 73666006 73666101 73666006 ID=Msa0184310-mRNA-1:exon:25106;Parent=Msa0184310-mRNA-1
chr1_4 exon 73666525 73666700 73666525 ID=Msa0184310-mRNA-1:exon:25105;Parent=Msa0184310-mRNA-1
chr1_4 exon 73667369 73667442 73667369 ID=Msa0184310-mRNA-1:exon:25104;Parent=Msa0184310-mRNA-1
chr1_4 exon 73668619 73668726 73668619 ID=Msa0184310-mRNA-1:exon:25103;Parent=Msa0184310-mRNA-1
chr1_4 exon 73668816 73668990 73668816 ID=Msa0184310-mRNA-1:exon:25102;Parent=Msa0184310-mRNA-1
chr1_4 exon 73669266 73669316 73669266 ID=Msa0184310-mRNA-1:exon:25101;Parent=Msa0184310-mRNA-1
chr1_4 exon 73669417 73669527 73669417 ID=Msa0184310-mRNA-1:exon:25100;Parent=Msa0184310-mRNA-1
chr1_4 exon 73670492 73670546 73670492 ID=Msa0184310-mRNA-1:exon:25099;Parent=Msa0184310-mRNA-1
chr1_4 exon 73671003 73671122 73671003 ID=Msa0184310-mRNA-1:exon:25098;Parent=Msa0184310-mRNA-1
chr1_4 exon 73671299 73671353 73671299 ID=Msa0184310-mRNA-1:exon:25097;Parent=Msa0184310-mRNA-1
chr1_4 exon 73671917 73672020 73671917 ID=Msa0184310-mRNA-1:exon:25096;Parent=Msa0184310-mRNA-1
chr1_4 exon 73672311 73672760 73672311 ID=Msa0184310-mRNA-1:exon:25095;Parent=Msa0184310-mRNA-1
chr1_4 five_prime_UTR 73672505 73672760 73672505 ID=Msa0184310-mRNA-1:five_prime_utr;Parent=Msa0184310-mRNA-1
chr1_4 CDS 73672311 73672504 73672311 ID=Msa0184310-mRNA-1:cds;Parent=Msa0184310-mRNA-1
chr1_4 CDS 73671917 73672020 73671917 ID=Msa0184310-mRNA-1:cds;Parent=Msa0184310-mRNA-1
chr1_4 CDS 73671299 73671353 73671299 ID=Msa0184310-mRNA-1:cds;Parent=Msa0184310-mRNA-1
chr1_4 CDS 73671003 73671122 73671003 ID=Msa0184310-mRNA-1:cds;Parent=Msa0184310-mRNA-1
chr1_4 CDS 73670492 73670546 73670492 ID=Msa0184310-mRNA-1:cds;Parent=Msa0184310-mRNA-1
chr1_4 CDS 73669417 73669527 73669417 ID=Msa0184310-mRNA-1:cds;Parent=Msa0184310-mRNA-1
chr1_4 CDS 73669266 73669316 73669266 ID=Msa0184310-mRNA-1:cds;Parent=Msa0184310-mRNA-1
chr1_4 CDS 73668856 73668990 73668856 ID=Msa0184310-mRNA-1:cds;Parent=Msa0184310-mRNA-1
chr1_4 three_prime_UTR 73668816 73668855 73668816 ID=Msa0184310-mRNA-1:three_prime_utr;Parent=Msa0184310-mRNA-1
chr1_4 three_prime_UTR 73668619 73668726 73668619 ID=Msa0184310-mRNA-1:three_prime_utr;Parent=Msa0184310-mRNA-1
chr1_4 three_prime_UTR 73667369 73667442 73667369 ID=Msa0184310-mRNA-1:three_prime_utr;Parent=Msa0184310-mRNA-1
chr1_4 three_prime_UTR 73666525 73666700 73666525 ID=Msa0184310-mRNA-1:three_prime_utr;Parent=Msa0184310-mRNA-1
chr1_4 three_prime_UTR 73666006 73666101 73666006 ID=Msa0184310-mRNA-1:three_prime_utr;Parent=Msa0184310-mRNA-1
chr1_4 three_prime_UTR 73665217 73665297 73665217 ID=Msa0184310-mRNA-1:three_prime_utr;Parent=Msa0184310-mRNA-1
chr1_4 three_prime_UTR 73665040 73665093 73665040 ID=Msa0184310-mRNA-1:three_prime_utr;Parent=Msa0184310-mRNA-1
chr1_4 three_prime_UTR 73664815 73664949 73664815 ID=Msa0184310-mRNA-1:three_prime_utr;Parent=Msa0184310-mRNA-1
chr1_4 three_prime_UTR 73664188 73664710 73664188 ID=Msa0184310-mRNA-1:three_prime_utr;Parent=Msa0184310-mRNA-1
Gene Sequence

>Msa0184310

ATGGTGATCGAGAACGACATTGAGAGTTGCGGAAGCAGAGCGGTGCAATCACACGCGAATCCTCGCCATCACCGTCAGAAACTTGAAGTTTACAATGAAGTTCTTCGTCGAATTCAAGATTCCGATTGCGAAGACGCTCTTGTTCCTGGTTTCGATGATCAACTCTGGCTTCACTTCAATCGTCTTCCCGCTAGGTATGCATTGGATGTGAATGTGGAGAGAGCTGAAGATGTTCTTGCTCATAAGAGATTGCTCGAGTTGGCAGAAGATCCTGCAAATCGTCCTGCATTTCAAGTTCATCCTTCTGAGAAAGATGATGCACAAAGTTCTCTTAACTATTCTTTAAAGCAGGGAATTCATCCACCACCTACGTTTGGTTCTTCCTCTAACCTTGAAGCTCTTGCACTTCATACAAATAAAAATAACATTGAAGACGGAGACAATACTATGGGTGTGATGCCAAATTTTAACAGGCCCATGCACGAGATTACCTTTTCAACAATTGACAAGCCTAAACTCCTTAGTCAGTTAACTTCAATACTTGGTGAGATTGGACTGAATATTCAAGAAGCTCATGCGTTTTCCACCTCTGATGGGTTTTCCCTGGATGTCTTCGTCGTTGAGGGATGGCCTAATGAGGAAACTGAGGAGCTTAAAGGTGTGTTGGAAAAGGAAATTTTGAAGGTTAAGGATCAATATCTGTCAAATCAGGGCACACTTTATTCCTCAAATGATCAATACCAGACTAGGATGGAATCCTCCCCTGATTGCATACAAATACCATTTGATGGAGCTGATGTCTGGGAATTGATCCCAGCCAGCTAA

Protein sequence

>Msa0184310

MVIENDIESCGSRAVQSHANPRHHRQKLEVYNEVLRRIQDSDCEDALVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLELAEDPANRPAFQVHPSEKDDAQSSLNYSLKQGIHPPPTFGSSSNLEALALHTNKNNIEDGDNTMGVMPNFNRPMHEITFSTIDKPKLLSQLTSILGEIGLNIQEAHAFSTSDGFSLDVFVVEGWPNEETEELKGVLEKEILKVKDQYLSNQGTLYSSNDQYQTRMESSPDCIQIPFDGADVWELIPAS*