AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0190040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0190040 MtrunA17_Chr2g0286711 59.846 259 83 7 84 321 93 351 1.44e-89 282
Msa0190040 MtrunA17_Chr7g0231931 60.996 241 82 2 94 322 118 358 1.35e-88 280
Msa0190040 MtrunA17_Chr2g0291331 50.289 346 131 10 1 313 1 338 3.06e-88 273
Msa0190040 MtrunA17_Chr2g0291831 60.833 240 79 5 92 316 128 367 5.24e-84 262
Msa0190040 MtrunA17_Chr2g0291811 58.475 236 82 4 97 316 86 321 8.59e-75 237
Msa0190040 MtrunA17_Chr2g0291321 55.760 217 60 2 103 283 165 381 2.50e-69 221
Msa0190040 MtrunA17_Chr2g0291381 51.807 249 100 4 50 283 48 291 2.18e-68 215
Msa0190040 MtrunA17_Chr2g0310991 59.574 188 58 2 154 323 1 188 1.24e-67 210
Msa0190040 MtrunA17_Chr4g0025761 44.664 253 103 2 108 323 111 363 1.00e-63 207
Msa0190040 MtrunA17_Chr2g0291361 50.926 216 70 1 104 283 98 313 4.77e-63 202
Msa0190040 MtrunA17_Chr3g0082331 42.678 239 106 2 116 323 127 365 2.38e-57 192
Msa0190040 MtrunA17_Chr2g0291391 41.509 318 128 9 1 261 1 317 1.89e-56 186
Msa0190040 MtrunA17_Chr2g0291351 52.880 191 76 3 107 284 4 193 4.06e-53 173
Msa0190040 MtrunA17_Chr6g0459191 43.434 198 84 1 154 323 1 198 8.80e-50 168
Msa0190040 MtrunA17_Chr4g0056591 40.000 215 116 2 102 303 153 367 9.68e-45 162
Msa0190040 MtrunA17_Chr2g0311061 58.065 124 36 1 154 261 1 124 2.60e-39 135
Msa0190040 MtrunA17_Chr8g0391041 40.376 213 80 4 154 323 1 209 6.97e-39 139
Msa0190040 MtrunA17_Chr2g0310931 57.983 119 39 2 154 261 1 119 2.49e-36 127
Msa0190040 MtrunA17_Chr8g0391571 55.769 104 43 1 223 323 1 104 2.07e-30 114
Msa0190040 MtrunA17_Chr2g0291421 47.170 106 48 1 81 186 120 217 8.84e-23 94.7
Msa0190040 MtrunA17_Chr2g0310881 58.824 85 18 1 182 249 43 127 7.08e-22 90.1
Msa0190040 MtrunA17_Chr8g0391581 41.053 95 55 1 117 210 119 213 2.20e-19 85.9
Msa0190040 MtrunA17_Chr2g0291301 58.333 72 29 1 118 188 161 232 2.54e-19 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0190040 AT2G45030.1 60.417 240 83 2 94 321 121 360 1.06e-91 289
Msa0190040 AT1G45332.1 59.167 240 86 2 94 321 121 360 3.49e-90 285
Msa0190040 AT1G45332.2 59.444 180 61 2 154 321 1 180 5.04e-66 218
Msa0190040 AT1G62750.1 40.930 215 114 2 102 303 157 371 1.40e-44 162

Find 261 sgRNAs with CRISPR-Local

Find 1143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACCTTTCTTCATTAAATT+TGG 0.114078 2_1:-5490341 None:intergenic
ATCAACCGTCCGTTCTTATT+TGG 0.152791 2_1:+5497961 Msa0190040:three_prime_UTR
TGCAAAAGCTGTTCTGAATT+TGG 0.153883 2_1:+5490185 Msa0190040:three_prime_UTR
CCATGAGTCATACCCTAAAA+TGG 0.189301 2_1:+5497148 Msa0190040:three_prime_UTR
TGCGCGCTCGATTGGGAAAA+TGG 0.205556 2_1:+5490777 Msa0190040:three_prime_UTR
AAATTTGGATTTGGTTGTTT+AGG 0.207678 2_1:-5490326 None:intergenic
TTAATACACTCTCGAATTCT+AGG 0.209731 2_1:+5491328 Msa0190040:three_prime_UTR
TAATTCATGATTCAAGAAAT+TGG 0.229062 2_1:-5490211 None:intergenic
AGGGTTAGTGCTTCTGCATT+TGG 0.233521 2_1:+5490475 Msa0190040:three_prime_UTR
TACTACCCAGGCCCGGCCTT+GGG 0.235066 2_1:-5497302 None:intergenic
CTCTCAAGGTCCAAAGGTTT+TGG 0.243971 2_1:+5497248 Msa0190040:three_prime_UTR
TCCTGCACAATCTTTGAATA+TGG 0.249528 2_1:-5490577 None:intergenic
TTTCTACACTCTCGAATTCT+AGG 0.251052 2_1:+5491238 Msa0190040:three_prime_UTR
TTGAGATATCATTCAACTTC+AGG 0.253165 2_1:-5490634 None:intergenic
GGCATCGGTGGTCACATTTA+AGG 0.258271 2_1:+5491510 Msa0190040:three_prime_UTR
GATGCCACAAGTGGTTTATT+AGG 0.265901 2_1:-5491493 None:intergenic
AATTTGGATTTGGTTGTTTA+GGG 0.270250 2_1:-5490325 None:intergenic
TTCTTCATTAAATTTGGATT+TGG 0.281882 2_1:-5490335 None:intergenic
AAAGGCTTTGTCAGAATTAT+AGG 0.290236 2_1:-5491152 None:intergenic
TTCATCTTGTCTCCCACTTC+AGG 0.293145 2_1:+5490715 Msa0190040:three_prime_UTR
GTGAGGATGTTATTTGTAAC+AGG 0.308495 2_1:-5491013 None:intergenic
AAATCACCTTCCAGGCCTAT+TGG 0.330533 2_1:-5486052 None:intergenic
GCTTCCTGCACAATCTTTGA+AGG 0.332853 2_1:-5490607 None:intergenic
GTTTGTTAACGACATGTCTA+AGG 0.333001 2_1:+5491548 Msa0190040:three_prime_UTR
GGGTTAGTGCTTCTGCATTT+GGG 0.333608 2_1:+5490476 Msa0190040:three_prime_UTR
AACCTCCTAGATGGTCCCTT+GGG 0.334057 2_1:+5497784 Msa0190040:three_prime_UTR
TAGTCAATGACTCATCAAAA+TGG 0.334461 2_1:+5497101 Msa0190040:three_prime_UTR
GCCCTTGAAAATCACCTTCC+AGG 0.347392 2_1:-5486060 None:intergenic
CTACTACCCAGGCCCGGCCT+TGG 0.348186 2_1:-5497303 None:intergenic
GAAGCGGGCCTTGAGGCAAT+TGG 0.353802 2_1:+5491107 Msa0190040:three_prime_UTR
CTCAAGAACAGCCGATGATA+TGG 0.362259 2_1:-5486344 None:intergenic
CATGGGTAGTGCTTTCAAAA+AGG 0.362336 2_1:+5488948 Msa0190040:CDS
TGTTCGGTTCATTATTAAAC+AGG 0.362606 2_1:+5498105 Msa0190040:three_prime_UTR
CAACACTAAACATTAGGAAT+TGG 0.363927 2_1:-5498026 None:intergenic
AATCACTTATTTATAGCATA+AGG 0.369417 2_1:+5497066 Msa0190040:three_prime_UTR
AGCCGGGCCTCCAAAACCTT+TGG 0.380156 2_1:-5497258 None:intergenic
GGACCCAATATCTATACTAT+TGG 0.389624 2_1:+5497175 Msa0190040:three_prime_UTR
GGGGTGAAGGTATCTGATTC+AGG 0.390701 2_1:+5490106 Msa0190040:CDS
GTAGAACCTGGTGCACAAAT+AGG 0.391918 2_1:-5496746 None:intergenic
CAAATTTAAGCTATCATGTT+GGG 0.392539 2_1:+5490434 Msa0190040:three_prime_UTR
CTTCCAGGCCTATTGGAACT+TGG 0.393085 2_1:-5486045 None:intergenic
CGATTAAAACCAGATTGAAT+TGG 0.394086 2_1:-5497723 None:intergenic
CGAAGAAGTTCCAGCAGATA+TGG 0.401142 2_1:+5486231 Msa0190040:CDS
CATATCTGCTGGAACTTCTT+CGG 0.401865 2_1:-5486230 None:intergenic
GAGTCCAATAGTATAGATAT+TGG 0.406687 2_1:-5497179 None:intergenic
AAAATGCAACACTAAACATT+AGG 0.413560 2_1:-5498032 None:intergenic
GTGGTGGCTAAGGCGGTAAT+TGG 0.418199 2_1:+5497439 Msa0190040:three_prime_UTR
TCGTGCTGGGCAAATAATAA+TGG 0.421458 2_1:+5496688 Msa0190040:three_prime_UTR
ATCCATCATGCGCGCTCGAT+TGG 0.421564 2_1:+5490769 Msa0190040:three_prime_UTR
ATCGATAAACTTGATAAGAA+AGG 0.424303 2_1:+5485107 Msa0190040:CDS
GGATTTGGTTGTTTAGGGGA+TGG 0.430267 2_1:-5490320 None:intergenic
GACATTCAAGAGGCTCGTGC+TGG 0.430717 2_1:+5496674 Msa0190040:three_prime_UTR
ATACAACTCTCAAGGCTAAA+GGG 0.432929 2_1:+5490933 Msa0190040:three_prime_UTR
TCCATCATGCGCGCTCGATT+GGG 0.433288 2_1:+5490770 Msa0190040:three_prime_UTR
GGTTGGCTTCGTAAGAACTA+AGG 0.435421 2_1:+5490455 Msa0190040:three_prime_UTR
AAGCGGGCCTTGAGGCAATT+GGG 0.435937 2_1:+5491108 Msa0190040:three_prime_UTR
CTAACATAATTTCTTAGACT+TGG 0.435993 2_1:-5490824 None:intergenic
TATGTTAGAATTGTAGAGGA+TGG 0.439826 2_1:+5490839 Msa0190040:three_prime_UTR
AATACAACTCTCAAGGCTAA+AGG 0.442646 2_1:+5490932 Msa0190040:three_prime_UTR
GTCAGATTTGCGATCGGATG+TGG 0.448179 2_1:+5497491 Msa0190040:three_prime_UTR
CTCTTTGGATGATTCGAAGC+GGG 0.448249 2_1:+5491092 Msa0190040:three_prime_UTR
AATCCAAATTTAATGAAGAA+AGG 0.448342 2_1:+5490338 Msa0190040:three_prime_UTR
TTATCGATAAATACAAGTCT+TGG 0.449473 2_1:-5485092 None:intergenic
AGTCCAATAGTATAGATATT+GGG 0.450708 2_1:-5497178 None:intergenic
TTGTTCTTTCAAGTGTCAGT+GGG 0.450735 2_1:+5485018 Msa0190040:CDS
TAAAGATGCATACGTCTTGA+AGG 0.453527 2_1:-5496783 None:intergenic
GAAATTTATACCTGTACTCA+TGG 0.454005 2_1:+5488930 Msa0190040:CDS
GATCTAACTGTATGGAATAG+AGG 0.455028 2_1:+5490528 Msa0190040:three_prime_UTR
CAACCTCCTAGATGGTCCCT+TGG 0.458333 2_1:+5497783 Msa0190040:three_prime_UTR
GTCATACCCTAAAATGGGCT+TGG 0.459521 2_1:+5497154 Msa0190040:three_prime_UTR
AAATGTTTCAACCTCCTAGA+TGG 0.461716 2_1:+5497775 Msa0190040:three_prime_UTR
ACAGGGACCACAGCCACTAC+TGG 0.464480 2_1:+5490015 Msa0190040:intron
AACATGATAGCTTAAATTTG+AGG 0.467545 2_1:-5490431 None:intergenic
CATGAGTCATACCCTAAAAT+GGG 0.474346 2_1:+5497149 Msa0190040:three_prime_UTR
TTTAGGCAAGATCCAAGCTT+GGG 0.475348 2_1:+5486005 Msa0190040:intron
TGTATAGTAAATGTTAGAAC+TGG 0.476757 2_1:+5491692 Msa0190040:three_prime_UTR
TTTGATGTGATCTAACTGTA+TGG 0.478403 2_1:+5490520 Msa0190040:three_prime_UTR
TAGTTATATGTGGTGGTTGG+AGG 0.483701 2_1:+5497376 Msa0190040:three_prime_UTR
CTCTCGACAAAGCAAAGGAC+GGG 0.483882 2_1:+5490086 Msa0190040:CDS
TTAACTAATATAACCACCAT+TGG 0.484244 2_1:-5497623 None:intergenic
ACATGATAGCTTAAATTTGA+GGG 0.484466 2_1:-5490430 None:intergenic
ACTACCCAGGCCCGGCCTTG+GGG 0.485147 2_1:-5497301 None:intergenic
GCAAGCAGCTCAACCAAGCC+GGG 0.486110 2_1:-5497274 None:intergenic
GTGAAACTCAATCAATCCCT+TGG 0.486654 2_1:-5483491 None:intergenic
ATGTTGATTGATTGCTAATG+AGG 0.487104 2_1:+5490893 Msa0190040:three_prime_UTR
TCTTTCATTACATATTGACT+TGG 0.487756 2_1:+5497208 Msa0190040:three_prime_UTR
GATTTGGTTGTTTAGGGGAT+GGG 0.487980 2_1:-5490319 None:intergenic
GTAAAACTTTCTGAATTGCT+CGG 0.489417 2_1:-5483533 None:intergenic
TGCACAATGATGCCCAAGCT+TGG 0.493141 2_1:-5486017 None:intergenic
ACCAAGGCTTCCATATCTGC+TGG 0.494855 2_1:-5486241 None:intergenic
GTGGAACTTCGTGGCGGTGG+AGG 0.494907 2_1:-5483344 None:intergenic
TAATAAACCACTTGTGGCAT+CGG 0.495568 2_1:+5491495 Msa0190040:three_prime_UTR
CAAAGCCCTCTGAACGTCAA+TGG 0.496067 2_1:-5484973 None:intergenic
TCCAGCAGATATGGAAGCCT+TGG 0.497162 2_1:+5486240 Msa0190040:CDS
CTTGTTCTTTCAAGTGTCAG+TGG 0.497834 2_1:+5485017 Msa0190040:CDS
TTTGTCTCTGAGACTACAAA+TGG 0.499138 2_1:-5491185 None:intergenic
GCAACAATCCAAGTTCCAAT+AGG 0.500414 2_1:+5486037 Msa0190040:CDS
CTTGAAGTGTGCTCCTCTCA+AGG 0.501059 2_1:+5497234 Msa0190040:three_prime_UTR
CGCAAGCAGCTCAACCAAGC+CGG 0.504993 2_1:-5497275 None:intergenic
TGGTTGTTTAGGGGATGGGC+AGG 0.508986 2_1:-5490315 None:intergenic
TTCTATGAGGAAGTCCAGCT+TGG 0.510111 2_1:+5483652 Msa0190040:CDS
AATCCAAGTTCCAATAGGCC+TGG 0.510830 2_1:+5486042 Msa0190040:CDS
CAAAACCTTTGGACCTTGAG+AGG 0.512513 2_1:-5497247 None:intergenic
ACCTGATTTAAAACTACCCA+CGG 0.515094 2_1:-5485137 None:intergenic
CATCGTTTGTTGATGCATGA+TGG 0.515206 2_1:+5495715 Msa0190040:three_prime_UTR
GTAGTATTGGTGATAGGTGG+TGG 0.515733 2_1:+5497423 Msa0190040:three_prime_UTR
AGGTATAAATTTCCGTGCTA+TGG 0.517711 2_1:-5488920 None:intergenic
TACCATTCCGACTACTACCC+AGG 0.517886 2_1:-5497314 None:intergenic
AAGCCTTGGTGTTAGACAAA+AGG 0.518127 2_1:+5486254 Msa0190040:CDS
CGAGGGTGTCCTTCGAGAGG+GGG 0.518428 2_1:+5491667 Msa0190040:three_prime_UTR
GACACTTGAAAGAACAAGAA+TGG 0.520548 2_1:-5485012 None:intergenic
ACTTCACCTATTTGTGCACC+AGG 0.521221 2_1:+5496740 Msa0190040:three_prime_UTR
GAGGTGGAACTTCGTGGCGG+TGG 0.521583 2_1:-5483347 None:intergenic
AGGGCTCAATGGTGAAGGAT+TGG 0.522030 2_1:+5490548 Msa0190040:three_prime_UTR
TTTAAGCTATCATGTTGGGT+TGG 0.523133 2_1:+5490438 Msa0190040:three_prime_UTR
AAAAGCTGTTCTGAATTTGG+AGG 0.524613 2_1:+5490188 Msa0190040:three_prime_UTR
ATTTCACCATTGACGTTCAG+AGG 0.525207 2_1:+5484967 Msa0190040:CDS
GTAATTGAAGTGGTAGTTTG+TGG 0.525471 2_1:+5497557 Msa0190040:three_prime_UTR
TTAATGGTTTATACTTGTCA+AGG 0.525589 2_1:+5491453 Msa0190040:three_prime_UTR
ATGTTAGAATTGTAGAGGAT+GGG 0.525870 2_1:+5490840 Msa0190040:three_prime_UTR
CTTTCATTACATATTGACTT+GGG 0.527749 2_1:+5497209 Msa0190040:three_prime_UTR
TAAACCCCAAGGGACCATCT+AGG 0.528480 2_1:-5497789 None:intergenic
CTACCCAGGCCCGGCCTTGG+GGG 0.528713 2_1:-5497300 None:intergenic
CATATCATCGGCTGTTCTTG+AGG 0.529594 2_1:+5486345 Msa0190040:CDS
ATTAAGATTCACTGCTAAGA+TGG 0.531927 2_1:+5490230 Msa0190040:three_prime_UTR
TTTGTTGATGCATGATGGTA+AGG 0.532002 2_1:+5495720 Msa0190040:three_prime_UTR
GGTACCTTACATGTTCTAGT+AGG 0.532251 2_1:-5491131 None:intergenic
GTGATTGATGGTGGTAGTAT+TGG 0.533013 2_1:+5497410 Msa0190040:three_prime_UTR
TCAAATTTAAGCTATCATGT+TGG 0.533311 2_1:+5490433 Msa0190040:three_prime_UTR
TCCCAATCGAGCGCGCATGA+TGG 0.533440 2_1:-5490771 None:intergenic
GTAGTCATAGTGGTGATTGA+TGG 0.534766 2_1:+5497398 Msa0190040:three_prime_UTR
ATCTAACTGTATGGAATAGA+GGG 0.535332 2_1:+5490529 Msa0190040:three_prime_UTR
TGGGCCTACTAGAACATGTA+AGG 0.536832 2_1:+5491127 Msa0190040:three_prime_UTR
GTCAATTTATTGATCGTAGG+TGG 0.538544 2_1:+5497347 Msa0190040:three_prime_UTR
GTGGTAAGAGATGCGATTGA+TGG 0.538734 2_1:+5497579 Msa0190040:three_prime_UTR
CAAAGAGGAAAATTAGAGAA+GGG 0.541566 2_1:-5491076 None:intergenic
AAGTAGTTATATGTGGTGGT+TGG 0.541803 2_1:+5497373 Msa0190040:three_prime_UTR
ACTTCCTCATAGAAATCTAC+CGG 0.543375 2_1:-5483643 None:intergenic
TTTGTTTATATAAAATCAAG+AGG 0.544173 2_1:-5497905 None:intergenic
TGAAACTCAATCAATCCCTT+GGG 0.547555 2_1:-5483490 None:intergenic
AGAACGGACGGTTGATCTGA+CGG 0.547578 2_1:-5497954 None:intergenic
CTTTCTGTTCAGTTAAAAGT+CGG 0.548294 2_1:+5497820 Msa0190040:three_prime_UTR
CAAAGCAAAGGACGGGGTGA+AGG 0.549765 2_1:+5490093 Msa0190040:CDS
TCCATATTCAAAGATTGTGC+AGG 0.551318 2_1:+5490576 Msa0190040:three_prime_UTR
GTATGGAATAGAGGGCTCAA+TGG 0.551352 2_1:+5490537 Msa0190040:three_prime_UTR
GTGGATCAAGTAGTTATATG+TGG 0.552999 2_1:+5497366 Msa0190040:three_prime_UTR
GTAGTCTCAGAGACAAACTC+AGG 0.557971 2_1:+5491191 Msa0190040:three_prime_UTR
ATGGTGGTAGTATTGGTGAT+AGG 0.557992 2_1:+5497417 Msa0190040:three_prime_UTR
ATGCAGTCAGTGGGTGCAGT+CGG 0.560898 2_1:-5497998 None:intergenic
GTCGGAATGGTATTCGATGA+TGG 0.561958 2_1:+5497325 Msa0190040:three_prime_UTR
TACGAGGGTGTCCTTCGAGA+GGG 0.562005 2_1:+5491665 Msa0190040:three_prime_UTR
ACATTCAAGAGGCTCGTGCT+GGG 0.562025 2_1:+5496675 Msa0190040:three_prime_UTR
GAGTGGTTGTCGACAACCAA+TGG 0.562199 2_1:+5497607 Msa0190040:three_prime_UTR
GTTGGCTTCGTAAGAACTAA+GGG 0.563121 2_1:+5490456 Msa0190040:three_prime_UTR
CCAAAGAGGAAAATTAGAGA+AGG 0.564906 2_1:-5491077 None:intergenic
GTCATGATGGTAGTCGGTGG+TGG 0.565031 2_1:+5497469 Msa0190040:three_prime_UTR
GAAACTGTCTCAGAGGTTGA+CGG 0.566521 2_1:+5486289 Msa0190040:CDS
AATTGGAGTAGTGGTCATGA+TGG 0.567569 2_1:+5497456 Msa0190040:three_prime_UTR
AAAACCTTCAAAGATTGTGC+AGG 0.570994 2_1:+5490603 Msa0190040:three_prime_UTR
TTGGTGATAGGTGGTGGCTA+AGG 0.571092 2_1:+5497429 Msa0190040:three_prime_UTR
TTATGTAGGAAGCAGTTCGT+AGG 0.571382 2_1:+5488893 Msa0190040:intron
GTTACGGAGGTGGAACTTCG+TGG 0.574920 2_1:-5483353 None:intergenic
CGATGGCTCGTTTCTCGAGG+TGG 0.575902 2_1:+5483281 None:intergenic
GGCCGGGCCTGGGTAGTAGT+CGG 0.576167 2_1:+5497307 Msa0190040:three_prime_UTR
GTGGTAGTATTGGTGATAGG+TGG 0.577017 2_1:+5497420 Msa0190040:three_prime_UTR
GTCATAGTGGTGATTGATGG+TGG 0.577897 2_1:+5497401 Msa0190040:three_prime_UTR
GCATACTTACTAACTTCACT+CGG 0.579029 2_1:-5490064 None:intergenic
TTCCGACTACTACCCAGGCC+CGG 0.580366 2_1:-5497309 None:intergenic
AAATTTAAATACAACTCTCA+AGG 0.581156 2_1:+5490925 Msa0190040:three_prime_UTR
CAAGTTCCAATAGGCCTGGA+AGG 0.582501 2_1:+5486046 Msa0190040:CDS
GTGCTCCTCTCAAGGTCCAA+AGG 0.582935 2_1:+5497242 Msa0190040:three_prime_UTR
GCAACCCACTTGGGTTGGCG+TGG 0.583340 2_1:+5496918 Msa0190040:three_prime_UTR
AAGTGGAAGTAAGACCAAGC+TGG 0.584204 2_1:-5483666 None:intergenic
TCGGTGGTCACATTTAAGGC+GGG 0.584865 2_1:+5491514 Msa0190040:three_prime_UTR
ACCTCCTAGATGGTCCCTTG+GGG 0.585675 2_1:+5497785 Msa0190040:three_prime_UTR
ACACCATCCAGTAGTGGCTG+TGG 0.585914 2_1:-5490022 None:intergenic
AAAGCACTACCCATGAGTAC+AGG 0.587695 2_1:-5488940 None:intergenic
TTACTAACTTCACTCGGGCA+TGG 0.590021 2_1:-5490058 None:intergenic
CCTCGGAGAAGTTACGGAGG+TGG 0.590329 2_1:-5483363 None:intergenic
GTCAACCACCACTCAAACAA+CGG 0.591220 2_1:-5497530 None:intergenic
ATTTGGATTTGGTTGTTTAG+GGG 0.591774 2_1:-5490324 None:intergenic
AATAGAGGGCTCAATGGTGA+AGG 0.593429 2_1:+5490543 Msa0190040:three_prime_UTR
TTGTGGCAAAACCATATCAT+CGG 0.593745 2_1:+5486333 Msa0190040:CDS
AAGTCCTAATAAACCACTTG+TGG 0.596741 2_1:+5491489 Msa0190040:three_prime_UTR
ATGGTCAATTTATTGATCGT+AGG 0.598251 2_1:+5497344 Msa0190040:three_prime_UTR
AAATTATGTTAGAATTGTAG+AGG 0.598856 2_1:+5490835 Msa0190040:three_prime_UTR
GCGATCGACCGTTGTTTGAG+TGG 0.598942 2_1:+5497522 Msa0190040:three_prime_UTR
ACCCACTTGGGTTGGCGTGG+TGG 0.600349 2_1:+5496921 Msa0190040:three_prime_UTR
TTTCACCATTGACGTTCAGA+GGG 0.600371 2_1:+5484968 Msa0190040:CDS
TCACGATGGCTCGTTTCTCG+AGG 0.601374 2_1:+5483278 None:intergenic
ATCGGTGGTCACATTTAAGG+CGG 0.601468 2_1:+5491513 Msa0190040:three_prime_UTR
GTGATAGGTGGTGGCTAAGG+CGG 0.601749 2_1:+5497432 Msa0190040:three_prime_UTR
GTTCCCGGTAGATTTCTATG+AGG 0.601934 2_1:+5483639 Msa0190040:CDS
TCTGACAAAGCCTTTGCACA+AGG 0.602324 2_1:+5491160 Msa0190040:three_prime_UTR
ATCGACCGTTGTTTGAGTGG+TGG 0.602389 2_1:+5497525 Msa0190040:three_prime_UTR
AAAATTGAGTGCTCCTGAAG+TGG 0.602448 2_1:-5490728 None:intergenic
TAAGGCGGTAATTGGAGTAG+TGG 0.602890 2_1:+5497447 Msa0190040:three_prime_UTR
CGAAGTACACCATCCAGTAG+TGG 0.604190 2_1:-5490028 None:intergenic
GCTTTACAAGCGATTGACAG+AGG 0.606266 2_1:+5483576 Msa0190040:CDS
AAAGAGGAAAATTAGAGAAG+GGG 0.607006 2_1:-5491075 None:intergenic
TTCTTATTTGGACAATTCAG+AGG 0.608760 2_1:+5497973 Msa0190040:three_prime_UTR
GTGACCACCGATGCCACAAG+TGG 0.609235 2_1:-5491502 None:intergenic
GGTTGACGGTGAACTTGCTG+AGG 0.609257 2_1:+5486303 Msa0190040:CDS
ACGAGGGTGTCCTTCGAGAG+GGG 0.610881 2_1:+5491666 Msa0190040:three_prime_UTR
AAGTCAATTCATAAACCCCA+AGG 0.612237 2_1:-5497800 None:intergenic
TGGAGGAACGTACTGTATTG+TGG 0.612622 2_1:-5483327 None:intergenic
CGGCTCAAGGACTTTCCCAA+GGG 0.613336 2_1:+5483475 Msa0190040:CDS
GTGGTTGGAGGTAGTCATAG+TGG 0.614976 2_1:+5497388 Msa0190040:three_prime_UTR
TCGGCTCAAGGACTTTCCCA+AGG 0.616959 2_1:+5483474 Msa0190040:CDS
TAGTAGGCCCAATTGCCTCA+AGG 0.618110 2_1:-5491115 None:intergenic
ATTGAAGTGGTAGTTTGTGG+TGG 0.619314 2_1:+5497560 Msa0190040:three_prime_UTR
AAATTTATACCTGTACTCAT+GGG 0.619394 2_1:+5488931 Msa0190040:CDS
TTGGATTAAATGCAGTCAGT+GGG 0.619395 2_1:-5498007 None:intergenic
TAAACCACTTGTGGCATCGG+TGG 0.620458 2_1:+5491498 Msa0190040:three_prime_UTR
TTACGAGGGTGTCCTTCGAG+AGG 0.622783 2_1:+5491664 Msa0190040:three_prime_UTR
ATTGGATTAAATGCAGTCAG+TGG 0.624375 2_1:-5498008 None:intergenic
GTTTGAGTGGTGGTTGACGA+CGG 0.625507 2_1:+5497535 Msa0190040:three_prime_UTR
ATGATTCGAAGCGGGCCTTG+AGG 0.626333 2_1:+5491100 Msa0190040:three_prime_UTR
AAGATAAGAAAAGTAGAACC+TGG 0.626913 2_1:-5496758 None:intergenic
ACAAATGGAACCTTGTGCAA+AGG 0.626944 2_1:-5491170 None:intergenic
GCTCTCGACAAAGCAAAGGA+CGG 0.628328 2_1:+5490085 Msa0190040:CDS
CCTCTTTGGATGATTCGAAG+CGG 0.629222 2_1:+5491091 Msa0190040:three_prime_UTR
GTATGCTCTCGACAAAGCAA+AGG 0.629505 2_1:+5490081 Msa0190040:CDS
GGCCTGGGTAGTAGTCGGAA+TGG 0.629858 2_1:+5497312 Msa0190040:three_prime_UTR
TATGTAGGAAGCAGTTCGTA+GGG 0.631118 2_1:+5488894 Msa0190040:intron
TACCACCACGCCAACCCAAG+TGG 0.631612 2_1:-5496923 None:intergenic
CTGAATTGTCCAAATAAGAA+CGG 0.631890 2_1:-5497970 None:intergenic
ATAAGAAAGGAGCAAATCCG+TGG 0.633905 2_1:+5485120 Msa0190040:CDS
GGACCACAGCCACTACTGGA+TGG 0.634249 2_1:+5490019 Msa0190040:CDS
ACCACCACGCCAACCCAAGT+GGG 0.638828 2_1:-5496922 None:intergenic
TTTGGGTGAAGAATTTACGA+GGG 0.640230 2_1:+5491650 Msa0190040:intron
TGTTCTTTCAAGTGTCAGTG+GGG 0.646521 2_1:+5485019 Msa0190040:CDS
GAGGAGGACTATCACGTGGA+GGG 0.648743 2_1:+5483595 Msa0190040:CDS
GTTGACGACGGTAATTGAAG+TGG 0.651943 2_1:+5497547 Msa0190040:three_prime_UTR
CCGCTTCGAATCATCCAAAG+AGG 0.655871 2_1:-5491091 None:intergenic
TTCGTAGGGCTACCATAGCA+CGG 0.656275 2_1:+5488908 Msa0190040:CDS
ATTGTCCAAATAAGAACGGA+CGG 0.657514 2_1:-5497966 None:intergenic
AAACTTGCAGGACATTCAAG+AGG 0.659561 2_1:+5496664 Msa0190040:intron
GTGGTGGTCAGATTTGCGAT+CGG 0.659794 2_1:+5497485 Msa0190040:three_prime_UTR
ACCCCAAGGGACCATCTAGG+AGG 0.662851 2_1:-5497786 None:intergenic
TTGATTGCTAATGAGGCACA+AGG 0.667907 2_1:+5490900 Msa0190040:three_prime_UTR
GATCAAGTAGTTATATGTGG+TGG 0.668415 2_1:+5497369 Msa0190040:three_prime_UTR
GTAGTGGTCATGATGGTAGT+CGG 0.668642 2_1:+5497463 Msa0190040:three_prime_UTR
TCTCGACAAAGCAAAGGACG+GGG 0.670211 2_1:+5490087 Msa0190040:CDS
CTTCCTCATAGAAATCTACC+GGG 0.671223 2_1:-5483642 None:intergenic
AAATTGAGTGCTCCTGAAGT+GGG 0.671874 2_1:-5490727 None:intergenic
ACTCATAGAAACTGTCTCAG+AGG 0.672452 2_1:+5486282 Msa0190040:CDS
TAGTCTCAGAGACAAACTCA+GGG 0.673253 2_1:+5491192 Msa0190040:three_prime_UTR
CATACTTACTAACTTCACTC+GGG 0.674333 2_1:-5490063 None:intergenic
TGGTTGTCGACAACCAATGG+TGG 0.675951 2_1:+5497610 Msa0190040:three_prime_UTR
TTACAAGCGATTGACAGAGG+AGG 0.678603 2_1:+5483579 Msa0190040:CDS
AGTTAGATCACATCAAAACC+AGG 0.679243 2_1:-5490514 None:intergenic
AGAGGAGGACTATCACGTGG+AGG 0.686824 2_1:+5483594 Msa0190040:CDS
AGTCAATTCATAAACCCCAA+GGG 0.691412 2_1:-5497799 None:intergenic
CGAGGTGGTCATTCATACCG+CGG 0.703569 2_1:+5483296 Msa0190040:CDS
TGCGATTGATGGTGTCAGAG+TGG 0.706118 2_1:+5497590 Msa0190040:three_prime_UTR
TAAGAAAGGAGCAAATCCGT+GGG 0.710805 2_1:+5485121 Msa0190040:CDS
GACAGAGGAGGACTATCACG+TGG 0.712193 2_1:+5483591 Msa0190040:CDS
GTATTGTGGTACAATAGCCG+CGG 0.731094 2_1:-5483313 None:intergenic
GTGGTCATGATGGTAGTCGG+TGG 0.742693 2_1:+5497466 Msa0190040:three_prime_UTR
ACGGAGGTGGAACTTCGTGG+CGG 0.758712 2_1:-5483350 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTAATATATATTTTTTT+TGG + chr2_1:5491632-5491651 Msa0190040:intron 0.0%
!!! TATTAATATATATTTTTTTT+GGG + chr2_1:5491633-5491652 Msa0190040:intron 0.0%
!! AATAATTAAAAATATTCGAA+CGG + chr2_1:5485677-5485696 Msa0190040:intron 10.0%
!! AAGTCAATATAAATTATTAT+AGG - chr2_1:5485928-5485947 None:intergenic 10.0%
!!! ATAATAATTTATATTGACTT+TGG + chr2_1:5485928-5485947 Msa0190040:intron 10.0%
!!! TAATAATTTATATTGACTTT+GGG + chr2_1:5485929-5485948 Msa0190040:intron 10.0%
!!! CAGTTATAATATTTTTTTTT+TGG + chr2_1:5487542-5487561 Msa0190040:intron 10.0%
!!! ACAATATTAGATTATTTTAA+TGG + chr2_1:5491437-5491456 Msa0190040:three_prime_UTR 10.0%
!! TAGAATTTAACAATATTTAA+AGG - chr2_1:5491582-5491601 None:intergenic 10.0%
!! TGAAATGAAATATTAAATTA+GGG - chr2_1:5496163-5496182 None:intergenic 10.0%
!! ATGAAATGAAATATTAAATT+AGG - chr2_1:5496164-5496183 None:intergenic 10.0%
!!! GGATTAATATTTTTTAAAAA+TGG + chr2_1:5496401-5496420 Msa0190040:intron 10.0%
!!! TTGAAAATTATGAATTTTGT+AGG - chr2_1:5484777-5484796 None:intergenic 15.0%
!! ATTTGGGTAATATAAAAAAA+CGG + chr2_1:5485423-5485442 Msa0190040:intron 15.0%
!!! CTAAATCTATATTTAAGTTA+GGG - chr2_1:5485902-5485921 None:intergenic 15.0%
!!! ACTAAATCTATATTTAAGTT+AGG - chr2_1:5485903-5485922 None:intergenic 15.0%
!!! ACTATTTTGTTTTGTTTTTT+AGG + chr2_1:5485988-5486007 Msa0190040:intron 15.0%
!!! TTTTTTTTTTCTTTCTCTTT+TGG + chr2_1:5486390-5486409 Msa0190040:intron 15.0%
!!! AACTATTAACTTGTATATAT+GGG - chr2_1:5488034-5488053 None:intergenic 15.0%
!!! AAACTATTAACTTGTATATA+TGG - chr2_1:5488035-5488054 None:intergenic 15.0%
!! TTAAAAAAGTAAAATTCGAA+GGG - chr2_1:5488853-5488872 None:intergenic 15.0%
!! TTTAAAAAAGTAAAATTCGA+AGG - chr2_1:5488854-5488873 None:intergenic 15.0%
!!! TTTTTTTTTGAATTTTGAGT+TGG + chr2_1:5489094-5489113 Msa0190040:intron 15.0%
!!! TTTTTTTTGAATTTTGAGTT+GGG + chr2_1:5489095-5489114 Msa0190040:intron 15.0%
!! ACATTGGATTTAAATTATTT+GGG - chr2_1:5489726-5489745 None:intergenic 15.0%
!! TACATTGGATTTAAATTATT+TGG - chr2_1:5489727-5489746 None:intergenic 15.0%
!! TTAGTAAAAACAGTAATTAT+AGG - chr2_1:5491796-5491815 None:intergenic 15.0%
!!! TATCTTATTCTAGATTTTTT+TGG - chr2_1:5492132-5492151 None:intergenic 15.0%
!!! TTACATCATTTATAGTTTTT+AGG - chr2_1:5492181-5492200 None:intergenic 15.0%
!! TTAATTGAAATCAAATTGAA+GGG + chr2_1:5494462-5494481 Msa0190040:intron 15.0%
!! TGATTATTCTCTATTTATTA+AGG - chr2_1:5495298-5495317 None:intergenic 15.0%
!! TATATTCTCATTAAATTCAA+CGG + chr2_1:5495773-5495792 Msa0190040:intron 15.0%
!! ACATTTCCATTAAATTAATA+AGG - chr2_1:5495967-5495986 None:intergenic 15.0%
!!! CTATTATTGTTATTAAATAC+TGG - chr2_1:5496523-5496542 None:intergenic 15.0%
!! ATCAAACATGTTAAATATTA+CGG + chr2_1:5496604-5496623 Msa0190040:intron 15.0%
!!! TTTTTTTTGTTGTTCATAAA+TGG + chr2_1:5496959-5496978 Msa0190040:three_prime_UTR 15.0%
!! TTTGTTTATATAAAATCAAG+AGG - chr2_1:5497908-5497927 None:intergenic 15.0%
!!! TTAGTTTCATGTTTTATTGA+AGG + chr2_1:5483737-5483756 Msa0190040:intron 20.0%
!!! TAGTTTCATGTTTTATTGAA+GGG + chr2_1:5483738-5483757 Msa0190040:intron 20.0%
!!! TTTAATTTTTGGTGTTTTTC+TGG - chr2_1:5483831-5483850 None:intergenic 20.0%
!!! TGGAATTTCACTTTAATTTT+TGG - chr2_1:5483842-5483861 None:intergenic 20.0%
!!! ACTGTTAAATTGTTTTTCAA+TGG - chr2_1:5483995-5484014 None:intergenic 20.0%
!!! TCTTAATGAATTGATTTTCA+AGG + chr2_1:5484083-5484102 Msa0190040:intron 20.0%
!! AATAAGTCCTTAATAAGAAA+GGG - chr2_1:5484321-5484340 None:intergenic 20.0%
!! AAATAAGTCCTTAATAAGAA+AGG - chr2_1:5484322-5484341 None:intergenic 20.0%
!! TAATGACTTTAATATGAAGT+AGG - chr2_1:5484496-5484515 None:intergenic 20.0%
!! TAATGACTTTAATATGAAGT+AGG - chr2_1:5484496-5484515 None:intergenic 20.0%
!!! TAGATATTCAATTTTGTCTA+AGG + chr2_1:5484586-5484605 Msa0190040:intron 20.0%
!!! AGATATTCAATTTTGTCTAA+GGG + chr2_1:5484587-5484606 Msa0190040:intron 20.0%
!!! TTTGCATATTGATTAAGTTT+AGG + chr2_1:5484733-5484752 Msa0190040:intron 20.0%
!!! TTGCATATTGATTAAGTTTA+GGG + chr2_1:5484734-5484753 Msa0190040:intron 20.0%
!! ATATTGTTCCAATTTCTATT+TGG + chr2_1:5485406-5485425 Msa0190040:intron 20.0%
!! TATTGTTCCAATTTCTATTT+GGG + chr2_1:5485407-5485426 Msa0190040:intron 20.0%
!! TATATTACCCAAATAGAAAT+TGG - chr2_1:5485417-5485436 None:intergenic 20.0%
!!! TTTTTCTGATACTTTTGTAT+CGG + chr2_1:5486129-5486148 Msa0190040:intron 20.0%
!! ATAAACATGTGTTTATAAGT+GGG - chr2_1:5486570-5486589 None:intergenic 20.0%
!!! TGCCATTTTTTATTTGATAT+TGG + chr2_1:5486589-5486608 Msa0190040:intron 20.0%
!! GTCCAATATCAAATAAAAAA+TGG - chr2_1:5486594-5486613 None:intergenic 20.0%
!!! TGTTATTTCTATGTTATGTA+TGG + chr2_1:5487110-5487129 Msa0190040:intron 20.0%
!!! TTTTAGAATTTTGTATAACC+TGG + chr2_1:5487360-5487379 Msa0190040:intron 20.0%
!! AGTTATAATATTGTCATGAA+GGG + chr2_1:5487572-5487591 Msa0190040:intron 20.0%
!!! ATTTGAATGGATTATATGTA+TGG - chr2_1:5487861-5487880 None:intergenic 20.0%
!! TATGGTTTATGAAATTTGAA+TGG - chr2_1:5487874-5487893 None:intergenic 20.0%
!!! TATGGATTATAGAATTTGTA+TGG - chr2_1:5487892-5487911 None:intergenic 20.0%
!! CAAAGATTATGAAATTTGTA+TGG - chr2_1:5487910-5487929 None:intergenic 20.0%
!! GCATGAAATAAAAAATTTGA+GGG - chr2_1:5488308-5488327 None:intergenic 20.0%
!! ATACAATGATAATTGATCTA+AGG - chr2_1:5488557-5488576 None:intergenic 20.0%
!! TAAGAGTAAAACATAAATTG+AGG - chr2_1:5488713-5488732 None:intergenic 20.0%
!!! AAATGTAGTTTAGAATCTAT+TGG - chr2_1:5488770-5488789 None:intergenic 20.0%
!! TAAAAAAGTAAAATTCGAAG+GGG - chr2_1:5488852-5488871 None:intergenic 20.0%
!!! TTGATAATAATAATTTGCGA+AGG - chr2_1:5489527-5489546 None:intergenic 20.0%
!! ATTATTATTATCAATTGACG+TGG + chr2_1:5489533-5489552 Msa0190040:intron 20.0%
!! ATGAAAGATGCAATTTAAAT+GGG - chr2_1:5489803-5489822 None:intergenic 20.0%
!! AATGAAAGATGCAATTTAAA+TGG - chr2_1:5489804-5489823 None:intergenic 20.0%
!! TTATGTGAAGAATAGTAAAA+AGG - chr2_1:5489944-5489963 None:intergenic 20.0%
!! TAATTCATGATTCAAGAAAT+TGG - chr2_1:5490214-5490233 None:intergenic 20.0%
!! TTCTTCATTAAATTTGGATT+TGG - chr2_1:5490338-5490357 None:intergenic 20.0%
!! AATCCAAATTTAATGAAGAA+AGG + chr2_1:5490338-5490357 Msa0190040:three_prime_UTR 20.0%
!! TAACCTTTCTTCATTAAATT+TGG - chr2_1:5490344-5490363 None:intergenic 20.0%
!!! CCTGATTTTTTTGATTAATA+GGG - chr2_1:5490385-5490404 None:intergenic 20.0%
!! AAATTATGTTAGAATTGTAG+AGG + chr2_1:5490835-5490854 Msa0190040:three_prime_UTR 20.0%
!! AAATTTAAATACAACTCTCA+AGG + chr2_1:5490925-5490944 Msa0190040:three_prime_UTR 20.0%
!!! TTTTTACTAAATCCTGTAAT+GGG + chr2_1:5491806-5491825 Msa0190040:intron 20.0%
!!! AAACAATTGATAATACTTGT+AGG - chr2_1:5491946-5491965 None:intergenic 20.0%
!! TCATAGAAAAACATTAAGTA+GGG - chr2_1:5492008-5492027 None:intergenic 20.0%
!!! TTTTTTGGTAATGAAACAAA+TGG - chr2_1:5492117-5492136 None:intergenic 20.0%
!! TGATTACTCTCTATTTATTA+TGG - chr2_1:5492354-5492373 None:intergenic 20.0%
!! TTGATATTATATGTAACAAG+CGG - chr2_1:5492422-5492441 None:intergenic 20.0%
!! TTACATATAATATCAATTCG+AGG + chr2_1:5492426-5492445 Msa0190040:intron 20.0%
!! CACTTTCAAACAAAAAATTT+AGG - chr2_1:5493249-5493268 None:intergenic 20.0%
!!! CTAAATTTTTTGTTTGAAAG+TGG + chr2_1:5493247-5493266 Msa0190040:intron 20.0%
!! GTTAATTGAAATCAAATTGA+AGG + chr2_1:5494461-5494480 Msa0190040:intron 20.0%
!! TAATTGAAATCAAATTGAAG+GGG + chr2_1:5494463-5494482 Msa0190040:intron 20.0%
!!! TTATTTTTGTTTGAATTCGA+TGG - chr2_1:5494763-5494782 None:intergenic 20.0%
!! TAACGACCTTATTAATTTAA+TGG + chr2_1:5495958-5495977 Msa0190040:intron 20.0%
!!! TAAGGGAATATTTCTTTTTT+TGG + chr2_1:5496098-5496117 Msa0190040:intron 20.0%
!! TTACCCTTAGATATTTATTA+CGG - chr2_1:5496197-5496216 None:intergenic 20.0%
!! TAAATATCTAAGGGTAATAT+TGG + chr2_1:5496200-5496219 Msa0190040:intron 20.0%
!! TCAAACATGTTAAATATTAC+GGG + chr2_1:5496605-5496624 Msa0190040:intron 20.0%
!!! TTGCTCTTATTTTTTAAGAT+TGG + chr2_1:5496819-5496838 Msa0190040:three_prime_UTR 20.0%
!! AATCACTTATTTATAGCATA+AGG + chr2_1:5497066-5497085 Msa0190040:three_prime_UTR 20.0%
! AGGTTATTTGATCAAATAAC+TGG - chr2_1:5483862-5483881 None:intergenic 25.0%
!!! CAAATAACCTTTTTTTCTTC+TGG + chr2_1:5483872-5483891 Msa0190040:intron 25.0%
! AGTATTTATCAAAGACTCAA+TGG + chr2_1:5484201-5484220 Msa0190040:intron 25.0%
!! CCTTATTAATGTATCGATAT+TGG - chr2_1:5484229-5484248 None:intergenic 25.0%
! CCAATATCGATACATTAATA+AGG + chr2_1:5484226-5484245 Msa0190040:intron 25.0%
!! TCAATTACTTCTTTTATACG+TGG + chr2_1:5484251-5484270 Msa0190040:intron 25.0%
!! CAATTACTTCTTTTATACGT+GGG + chr2_1:5484252-5484271 Msa0190040:intron 25.0%
!! GATATTCAATTTTGTCTAAG+GGG + chr2_1:5484588-5484607 Msa0190040:intron 25.0%
!! AAATTTAAGGTGAATAAGTG+GGG - chr2_1:5484658-5484677 None:intergenic 25.0%
!! CAAATTTAAGGTGAATAAGT+GGG - chr2_1:5484659-5484678 None:intergenic 25.0%
!! TCAAATTTAAGGTGAATAAG+TGG - chr2_1:5484660-5484679 None:intergenic 25.0%
! ACCTTAAATTTGAATTTCTC+TGG + chr2_1:5484667-5484686 Msa0190040:intron 25.0%
! ACCAGAGAAATTCAAATTTA+AGG - chr2_1:5484671-5484690 None:intergenic 25.0%
! AAAAACAAATACCAACAAAG+AGG - chr2_1:5484865-5484884 None:intergenic 25.0%
! TTATCGATAAATACAAGTCT+TGG - chr2_1:5485095-5485114 None:intergenic 25.0%
! ATCGATAAACTTGATAAGAA+AGG + chr2_1:5485107-5485126 Msa0190040:CDS 25.0%
! ATAGAACACAATATTCAAAC+TGG + chr2_1:5485341-5485360 Msa0190040:intron 25.0%
! TAGAACACAATATTCAAACT+GGG + chr2_1:5485342-5485361 Msa0190040:intron 25.0%
!!! TAAAGGCATACTTTTTTCAA+TGG + chr2_1:5486101-5486120 Msa0190040:intron 25.0%
! ATAGAAGGGAATGTATTATA+GGG + chr2_1:5486435-5486454 Msa0190040:intron 25.0%
! TAAACATGTGTTTATAAGTG+GGG - chr2_1:5486569-5486588 None:intergenic 25.0%
! CATAAACATGTGTTTATAAG+TGG - chr2_1:5486571-5486590 None:intergenic 25.0%
! ATAGAAATAACACTTGGAAA+GGG - chr2_1:5487102-5487121 None:intergenic 25.0%
! CATAACATAGAAATAACACT+TGG - chr2_1:5487108-5487127 None:intergenic 25.0%
!! ATCTTAGCATGTTTTCATTT+TGG - chr2_1:5487238-5487257 None:intergenic 25.0%
! AAATGAAAACATGCTAAGAT+AGG + chr2_1:5487238-5487257 Msa0190040:intron 25.0%
! AATGAAAACATGCTAAGATA+GGG + chr2_1:5487239-5487258 Msa0190040:intron 25.0%
! AGTTATTCATCAATTTGGTT+CGG + chr2_1:5487395-5487414 Msa0190040:intron 25.0%
! CAGTTATAATATTGTCATGA+AGG + chr2_1:5487571-5487590 Msa0190040:intron 25.0%
! GTTATAATATTGTCATGAAG+GGG + chr2_1:5487573-5487592 Msa0190040:intron 25.0%
! CTGATGTAAAGCAATTAATT+AGG - chr2_1:5488080-5488099 None:intergenic 25.0%
! AATTAATTGCTTTACATCAG+CGG + chr2_1:5488080-5488099 Msa0190040:intron 25.0%
! GGCATGAAATAAAAAATTTG+AGG - chr2_1:5488309-5488328 None:intergenic 25.0%
! AAAAAAGTAAAATTCGAAGG+GGG - chr2_1:5488851-5488870 None:intergenic 25.0%
! GTTATCAATTTGTGTTATGT+AGG + chr2_1:5488879-5488898 Msa0190040:intron 25.0%
! AAATTTATACCTGTACTCAT+GGG + chr2_1:5488931-5488950 Msa0190040:CDS 25.0%
! TCATGATATCTATCCAATAA+AGG - chr2_1:5489037-5489056 None:intergenic 25.0%
!! TTTTTGCTTGAATAATACGA+CGG + chr2_1:5489646-5489665 Msa0190040:intron 25.0%
! GATTTAAATTATTTGGGAAG+TGG - chr2_1:5489720-5489739 None:intergenic 25.0%
! TTCAATGTATCTTAGGAAAT+AGG + chr2_1:5489763-5489782 Msa0190040:intron 25.0%
! TCAATGTATCTTAGGAAATA+GGG + chr2_1:5489764-5489783 Msa0190040:intron 25.0%
! TGAAAGATGCAATTTAAATG+GGG - chr2_1:5489802-5489821 None:intergenic 25.0%
! GCTTGCTTAATTTATATACA+TGG - chr2_1:5489844-5489863 None:intergenic 25.0%
!! ATATTTTTCCTTTTGTGTAC+AGG + chr2_1:5489997-5490016 Msa0190040:intron 25.0%
!! TATTTTTCCTTTTGTGTACA+GGG + chr2_1:5489998-5490017 Msa0190040:intron 25.0%
!! AATTTGGATTTGGTTGTTTA+GGG - chr2_1:5490328-5490347 None:intergenic 25.0%
!! AAATTTGGATTTGGTTGTTT+AGG - chr2_1:5490329-5490348 None:intergenic 25.0%
! CCCTATTAATCAAAAAAATC+AGG + chr2_1:5490382-5490401 Msa0190040:three_prime_UTR 25.0%
!!! GCCTGATTTTTTTGATTAAT+AGG - chr2_1:5490386-5490405 None:intergenic 25.0%
! ACATGATAGCTTAAATTTGA+GGG - chr2_1:5490433-5490452 None:intergenic 25.0%
! AACATGATAGCTTAAATTTG+AGG - chr2_1:5490434-5490453 None:intergenic 25.0%
! TCAAATTTAAGCTATCATGT+TGG + chr2_1:5490433-5490452 Msa0190040:three_prime_UTR 25.0%
! CAAATTTAAGCTATCATGTT+GGG + chr2_1:5490434-5490453 Msa0190040:three_prime_UTR 25.0%
!! TTCTTAGACTTGGATTTTAT+TGG - chr2_1:5490817-5490836 None:intergenic 25.0%
! CTAACATAATTTCTTAGACT+TGG - chr2_1:5490827-5490846 None:intergenic 25.0%
! TTAATGGTTTATACTTGTCA+AGG + chr2_1:5491453-5491472 Msa0190040:three_prime_UTR 25.0%
! TGTATAGTAAATGTTAGAAC+TGG + chr2_1:5491692-5491711 Msa0190040:three_prime_UTR 25.0%
! AGAAAAAATGGGTAAGTTTA+AGG + chr2_1:5491717-5491736 Msa0190040:intron 25.0%
!! GTTTTTACTAAATCCTGTAA+TGG + chr2_1:5491805-5491824 Msa0190040:intron 25.0%
! AAATTTATTCTTCCCATTAC+AGG - chr2_1:5491821-5491840 None:intergenic 25.0%
! TGGGAAGAATAAATTTCAAA+AGG + chr2_1:5491825-5491844 Msa0190040:intron 25.0%
! TTACAACATTAATATACCCT+CGG + chr2_1:5491867-5491886 Msa0190040:intron 25.0%
! TAAGGATTTAAATACATGCA+GGG - chr2_1:5491913-5491932 None:intergenic 25.0%
! TACCAAAAACTTATCCTATA+TGG + chr2_1:5491965-5491984 Msa0190040:intron 25.0%
!! TTCCATATAGGATAAGTTTT+TGG - chr2_1:5491970-5491989 None:intergenic 25.0%
!! AATAGATAGCTTTTCCATAT+AGG - chr2_1:5491982-5492001 None:intergenic 25.0%
! GTCATAGAAAAACATTAAGT+AGG - chr2_1:5492009-5492028 None:intergenic 25.0%
!! TAATGTTTTTCTATGACGTA+TGG + chr2_1:5492012-5492031 Msa0190040:intron 25.0%
!!! CATTTATAGTTTTTAGGTAG+TGG - chr2_1:5492175-5492194 None:intergenic 25.0%
! TGATATTATATGTAACAAGC+GGG - chr2_1:5492421-5492440 None:intergenic 25.0%
! ATATGAATATCCAACAATAC+TGG + chr2_1:5492852-5492871 Msa0190040:intron 25.0%
! ATTATGTAAAAGCTTCACAT+TGG + chr2_1:5493086-5493105 Msa0190040:intron 25.0%
! TTATGTAAAAGCTTCACATT+GGG + chr2_1:5493087-5493106 Msa0190040:intron 25.0%
! AAAATATGTTCTCGATATCT+TGG - chr2_1:5493160-5493179 None:intergenic 25.0%
!!! GTTGATTGCGTTATTTTATT+GGG - chr2_1:5493227-5493246 None:intergenic 25.0%
!!! TCAATGACCTTTGAAATTTT+GGG - chr2_1:5493758-5493777 None:intergenic 25.0%
!!! ATCAATGACCTTTGAAATTT+TGG - chr2_1:5493759-5493778 None:intergenic 25.0%
!!! TTGTGTAGAAAAGTATTCTT+TGG + chr2_1:5493902-5493921 Msa0190040:intron 25.0%
! CAAAGATGAAAACTCAATTT+AGG - chr2_1:5493959-5493978 None:intergenic 25.0%
! AAGAATCGTTCATAATTGTT+TGG - chr2_1:5494002-5494021 None:intergenic 25.0%
! TTATGAACGATTCTTCAATA+AGG + chr2_1:5494007-5494026 Msa0190040:intron 25.0%
! ATACTTGTATCCTAAATTAG+AGG + chr2_1:5494073-5494092 Msa0190040:intron 25.0%
! TACTTGTATCCTAAATTAGA+GGG + chr2_1:5494074-5494093 Msa0190040:intron 25.0%
! TATTGTGCATTCTGATATTT+GGG - chr2_1:5494114-5494133 None:intergenic 25.0%
! ATATTGTGCATTCTGATATT+TGG - chr2_1:5494115-5494134 None:intergenic 25.0%
!! TCTAGATAAGTTAAAAGTGT+TGG - chr2_1:5494248-5494267 None:intergenic 25.0%
!! AATATCATTCACCATCTTTT+GGG - chr2_1:5494280-5494299 None:intergenic 25.0%
!! AAATATCATTCACCATCTTT+TGG - chr2_1:5494281-5494300 None:intergenic 25.0%
! AAAAGATGGTGAATGATATT+TGG + chr2_1:5494280-5494299 Msa0190040:intron 25.0%
! TTTATAAAAGACCAAAGAAC+AGG - chr2_1:5494390-5494409 None:intergenic 25.0%
! TGTTACATAACATTTACTTC+AGG - chr2_1:5494420-5494439 None:intergenic 25.0%
! TACAAATAACACATAATCCA+AGG + chr2_1:5494494-5494513 Msa0190040:intron 25.0%
! AGCAAGTTATAAATAAGAGA+AGG + chr2_1:5494609-5494628 Msa0190040:intron 25.0%
!! GGTAAATTATTGTTGTGTTT+TGG - chr2_1:5494848-5494867 None:intergenic 25.0%
! CACAACAATAATTTACCAAA+AGG + chr2_1:5494851-5494870 Msa0190040:intron 25.0%
!! ACTGCATTTAAAACAACAAT+GGG + chr2_1:5495096-5495115 Msa0190040:intron 25.0%
! ATATATGCAAACTTACATAC+AGG + chr2_1:5495231-5495250 Msa0190040:intron 25.0%
! TGATGCTCTATCTAAATTAT+CGG + chr2_1:5495368-5495387 Msa0190040:intron 25.0%
! TAAGAGGAAAATACAAAATG+AGG - chr2_1:5495503-5495522 None:intergenic 25.0%
!!! TGTTGTAGCAATATTTTAAG+AGG - chr2_1:5495519-5495538 None:intergenic 25.0%
!!! AGCTTTTATTTATCTCAATG+AGG + chr2_1:5495557-5495576 Msa0190040:intron 25.0%
!!! GCTTTTATTTATCTCAATGA+GGG + chr2_1:5495558-5495577 Msa0190040:intron 25.0%
! AAGTGACAATTAAAAAGGAA+CGG - chr2_1:5495865-5495884 None:intergenic 25.0%
! TCAGAAAGTGACAATTAAAA+AGG - chr2_1:5495870-5495889 None:intergenic 25.0%
! CAATACATTATTTCCACATT+AGG - chr2_1:5496022-5496041 None:intergenic 25.0%
! CTAATGTGGAAATAATGTAT+TGG + chr2_1:5496020-5496039 Msa0190040:intron 25.0%
! AATTGATTGCACAAAGTTTA+AGG + chr2_1:5496080-5496099 Msa0190040:intron 25.0%
! ATTGATTGCACAAAGTTTAA+GGG + chr2_1:5496081-5496100 Msa0190040:intron 25.0%
! TCTCCGTAATAAATATCTAA+GGG + chr2_1:5496191-5496210 Msa0190040:intron 25.0%
! TTTGAAAGTGACAGTTAAAT+AGG + chr2_1:5496251-5496270 Msa0190040:intron 25.0%
!! TGACAATTTTACACTAAGAA+TGG - chr2_1:5496432-5496451 None:intergenic 25.0%
!! ATATTGAGAAAAGGGTATAA+CGG - chr2_1:5496574-5496593 None:intergenic 25.0%
! TTTCACACATATTGAGAAAA+GGG - chr2_1:5496582-5496601 None:intergenic 25.0%
! ATTTCACACATATTGAGAAA+AGG - chr2_1:5496583-5496602 None:intergenic 25.0%
! AGTCCAATAGTATAGATATT+GGG - chr2_1:5497181-5497200 None:intergenic 25.0%
!! TCTTTCATTACATATTGACT+TGG + chr2_1:5497208-5497227 Msa0190040:three_prime_UTR 25.0%
!!! CTTTCATTACATATTGACTT+GGG + chr2_1:5497209-5497228 Msa0190040:three_prime_UTR 25.0%
! TTAACTAATATAACCACCAT+TGG - chr2_1:5497626-5497645 None:intergenic 25.0%
! AGTAAAAAACCAATTCAATC+TGG + chr2_1:5497714-5497733 Msa0190040:three_prime_UTR 25.0%
! AAAATGCAACACTAAACATT+AGG - chr2_1:5498035-5498054 None:intergenic 25.0%
GTAAAACTTTCTGAATTGCT+CGG - chr2_1:5483536-5483555 None:intergenic 30.0%
! GAGCAATTCAGAAAGTTTTA+CGG + chr2_1:5483535-5483554 Msa0190040:CDS 30.0%
!! ATGTTTTATTGAAGGGAACA+GGG + chr2_1:5483745-5483764 Msa0190040:intron 30.0%
!!! ATTTTTGGTGTTTTTCTGGT+GGG - chr2_1:5483827-5483846 None:intergenic 30.0%
!!! AATTTTTGGTGTTTTTCTGG+TGG - chr2_1:5483828-5483847 None:intergenic 30.0%
TGAGATTCCAGAAGAAAAAA+AGG - chr2_1:5483882-5483901 None:intergenic 30.0%
!! ATTTTCAAGGAGTGACTTTT+GGG + chr2_1:5484096-5484115 Msa0190040:intron 30.0%
ATAAATGATGTGTACACGTA+GGG - chr2_1:5484163-5484182 None:intergenic 30.0%
AATAAATGATGTGTACACGT+AGG - chr2_1:5484164-5484183 None:intergenic 30.0%
TAGTTGTCCCTTTCTTATTA+AGG + chr2_1:5484311-5484330 Msa0190040:intron 30.0%
!!! CTTATTTTTTCTACCTCCAT+AGG + chr2_1:5484335-5484354 Msa0190040:intron 30.0%
CAAAAAAATAGGCCTATGAA+AGG - chr2_1:5484442-5484461 None:intergenic 30.0%
!!! CTTTCATAGGCCTATTTTTT+TGG + chr2_1:5484440-5484459 Msa0190040:intron 30.0%
GATAATACACAATATGTGCA+GGG + chr2_1:5484610-5484629 Msa0190040:intron 30.0%
ATAATACACAATATGTGCAG+GGG + chr2_1:5484611-5484630 Msa0190040:intron 30.0%
AAAATGAAGAAAACCTGTGT+GGG - chr2_1:5484807-5484826 None:intergenic 30.0%
AAAAATGAAGAAAACCTGTG+TGG - chr2_1:5484808-5484827 None:intergenic 30.0%
AAATACCAACAAAGAGGATT+TGG - chr2_1:5484859-5484878 None:intergenic 30.0%
ATCTGCGAGACAAATATTAA+AGG - chr2_1:5484918-5484937 None:intergenic 30.0%
CATTATGTGCTTATATTTGC+AGG + chr2_1:5485376-5485395 Msa0190040:intron 30.0%
GTGTTATGTGCTTATATTTG+CGG + chr2_1:5485699-5485718 Msa0190040:intron 30.0%
TGTTATGTGCTTATATTTGC+GGG + chr2_1:5485700-5485719 Msa0190040:intron 30.0%
!!! CTCTTTTGGAGTTTTATGAT+AGG + chr2_1:5486404-5486423 Msa0190040:intron 30.0%
CATAGAAGGGAATGTATTAT+AGG + chr2_1:5486434-5486453 Msa0190040:intron 30.0%
CACAATTGTGGGTATTTATT+TGG + chr2_1:5486525-5486544 Msa0190040:intron 30.0%
AAACATGTGTTTATAAGTGG+GGG - chr2_1:5486568-5486587 None:intergenic 30.0%
CAATACAGGTAATTATTCAC+AGG + chr2_1:5486728-5486747 Msa0190040:intron 30.0%
TGATGACATTGTTTACAAGT+GGG - chr2_1:5486817-5486836 None:intergenic 30.0%
ATGATGACATTGTTTACAAG+TGG - chr2_1:5486818-5486837 None:intergenic 30.0%
GGAAAAAAACTGTCTCATAT+CGG - chr2_1:5486845-5486864 None:intergenic 30.0%
!!! CAGTTTTTTTCCCTATCAAT+CGG + chr2_1:5486853-5486872 Msa0190040:intron 30.0%
!!! AGTTTTTTTCCCTATCAATC+GGG + chr2_1:5486854-5486873 Msa0190040:intron 30.0%
! ATTAAAATTACCTTCTGGAG+AGG - chr2_1:5487013-5487032 None:intergenic 30.0%
GCAACATTAAAATTACCTTC+TGG - chr2_1:5487018-5487037 None:intergenic 30.0%
CATAGAAATAACACTTGGAA+AGG - chr2_1:5487103-5487122 None:intergenic 30.0%
ATGAAAACATGCTAAGATAG+GGG + chr2_1:5487240-5487259 Msa0190040:intron 30.0%
! AAGAAATGACCATACACTTT+TGG + chr2_1:5487297-5487316 Msa0190040:intron 30.0%
! TAATTGTAGCCAAAAGTGTA+TGG - chr2_1:5487309-5487328 None:intergenic 30.0%
CAAATTGATGAATAACTGGT+TGG - chr2_1:5487392-5487411 None:intergenic 30.0%
CAACCAGTTATTCATCAATT+TGG + chr2_1:5487390-5487409 Msa0190040:intron 30.0%
GAACCAAATTGATGAATAAC+TGG - chr2_1:5487396-5487415 None:intergenic 30.0%
GATGGGATTTACACATTTAT+GGG - chr2_1:5487433-5487452 None:intergenic 30.0%
! CCAATCTATGTACTTTTGAT+CGG + chr2_1:5487457-5487476 Msa0190040:intron 30.0%
!! TATGTACTTTTGATCGGTTT+GGG + chr2_1:5487463-5487482 Msa0190040:intron 30.0%
GGTACCATATTTATCTAACA+GGG - chr2_1:5487708-5487727 None:intergenic 30.0%
!! GTTTAGAAGTTCGAGTTTTT+AGG - chr2_1:5487836-5487855 None:intergenic 30.0%
!! CATGGAACACATTTTTGTTT+TGG - chr2_1:5487970-5487989 None:intergenic 30.0%
! AGGTTAGTTCAAACAATGTT+TGG - chr2_1:5488060-5488079 None:intergenic 30.0%
AGAGCTTGAGAACTAATTAA+GGG - chr2_1:5488143-5488162 None:intergenic 30.0%
! TTAATTAGTTCTCAAGCTCT+CGG + chr2_1:5488143-5488162 Msa0190040:intron 30.0%
AATGTAGTGCATGCATAAAA+TGG - chr2_1:5488201-5488220 None:intergenic 30.0%
! TTATGCATGCACTACATTTT+AGG + chr2_1:5488203-5488222 Msa0190040:intron 30.0%
! TATGCATGCACTACATTTTA+GGG + chr2_1:5488204-5488223 Msa0190040:intron 30.0%
!!! CATTTTAGGGTTAGATTGTT+TGG + chr2_1:5488217-5488236 Msa0190040:intron 30.0%
ACGTGATAAAACATACAACA+CGG - chr2_1:5488471-5488490 None:intergenic 30.0%
! ATGCATTTTCTTCTATTCCT+TGG + chr2_1:5488492-5488511 Msa0190040:intron 30.0%
AAAAAGTAAAATTCGAAGGG+GGG - chr2_1:5488850-5488869 None:intergenic 30.0%
GAAATTTATACCTGTACTCA+TGG + chr2_1:5488930-5488949 Msa0190040:CDS 30.0%
TTGAATTCATGTGTTCTTTG+CGG + chr2_1:5488987-5489006 Msa0190040:intron 30.0%
GATAAGAGTTTATAAAGAGG+AGG - chr2_1:5489164-5489183 None:intergenic 30.0%
CCTGATAAGAGTTTATAAAG+AGG - chr2_1:5489167-5489186 None:intergenic 30.0%
CCTCTTTATAAACTCTTATC+AGG + chr2_1:5489164-5489183 Msa0190040:intron 30.0%
CTTGATAAGAGTTCATAAAG+AGG - chr2_1:5489212-5489231 None:intergenic 30.0%
AGAATCCTATCTATTCAATG+TGG + chr2_1:5489230-5489249 Msa0190040:intron 30.0%
GAATCCTATCTATTCAATGT+GGG + chr2_1:5489231-5489250 Msa0190040:intron 30.0%
TTGGAAAATATGAGGGAAAA+TGG - chr2_1:5489380-5489399 None:intergenic 30.0%
GATAACTTCATTGCGTATTA+TGG - chr2_1:5489505-5489524 None:intergenic 30.0%
TTTAAATCCAATGTAGAGCA+AGG + chr2_1:5489732-5489751 Msa0190040:intron 30.0%
GAACAAGTTCAATGTATCTT+AGG + chr2_1:5489756-5489775 Msa0190040:intron 30.0%
AAATTAAGCAAGCATGTTGT+TGG + chr2_1:5489851-5489870 Msa0190040:intron 30.0%
AATTAAGCAAGCATGTTGTT+GGG + chr2_1:5489852-5489871 Msa0190040:intron 30.0%
AGCTACTTCAATGTATCTTA+AGG - chr2_1:5489889-5489908 None:intergenic 30.0%
ATTAAGATTCACTGCTAAGA+TGG + chr2_1:5490230-5490249 Msa0190040:three_prime_UTR 30.0%
! ATTTGGATTTGGTTGTTTAG+GGG - chr2_1:5490327-5490346 None:intergenic 30.0%
! AAAAATCAGGCTGAGAATTT+TGG + chr2_1:5490395-5490414 Msa0190040:three_prime_UTR 30.0%
! AAAATCAGGCTGAGAATTTT+GGG + chr2_1:5490396-5490415 Msa0190040:three_prime_UTR 30.0%
TTTGATGTGATCTAACTGTA+TGG + chr2_1:5490520-5490539 Msa0190040:three_prime_UTR 30.0%
ATCTAACTGTATGGAATAGA+GGG + chr2_1:5490529-5490548 Msa0190040:three_prime_UTR 30.0%
TTGAGATATCATTCAACTTC+AGG - chr2_1:5490637-5490656 None:intergenic 30.0%
! TGATATCTCAATCTCTTTTG+TGG + chr2_1:5490646-5490665 Msa0190040:three_prime_UTR 30.0%
TATGTTAGAATTGTAGAGGA+TGG + chr2_1:5490839-5490858 Msa0190040:three_prime_UTR 30.0%
ATGTTAGAATTGTAGAGGAT+GGG + chr2_1:5490840-5490859 Msa0190040:three_prime_UTR 30.0%
! ATGTTGATTGATTGCTAATG+AGG + chr2_1:5490893-5490912 Msa0190040:three_prime_UTR 30.0%
AAAGAGGAAAATTAGAGAAG+GGG - chr2_1:5491078-5491097 None:intergenic 30.0%
CAAAGAGGAAAATTAGAGAA+GGG - chr2_1:5491079-5491098 None:intergenic 30.0%
! AAAGGCTTTGTCAGAATTAT+AGG - chr2_1:5491155-5491174 None:intergenic 30.0%
TTAATACACTCTCGAATTCT+AGG + chr2_1:5491328-5491347 Msa0190040:three_prime_UTR 30.0%
!!! GTGCATTTTTTTCTATTCTG+TGG - chr2_1:5491266-5491285 None:intergenic 30.0%
GTAAGGATTTAAATACATGC+AGG - chr2_1:5491914-5491933 None:intergenic 30.0%
!!! TATAGTTTTTAGGTAGTGGA+TGG - chr2_1:5492171-5492190 None:intergenic 30.0%
TCTCTCAAGAAAGCAAAATA+AGG + chr2_1:5492316-5492335 Msa0190040:intron 30.0%
ATATATATGCTCCAACTTGA+GGG - chr2_1:5492384-5492403 None:intergenic 30.0%
TATCTTCACAAAACCTCAAT+GGG - chr2_1:5492454-5492473 None:intergenic 30.0%
ATATCTTCACAAAACCTCAA+TGG - chr2_1:5492455-5492474 None:intergenic 30.0%
!! TGAAGAGGTTTTAATGATGT+TGG + chr2_1:5492500-5492519 Msa0190040:intron 30.0%
!! GAAGAGGTTTTAATGATGTT+GGG + chr2_1:5492501-5492520 Msa0190040:intron 30.0%
! CTTGAAGTTTGATAATCAGT+CGG - chr2_1:5492613-5492632 None:intergenic 30.0%
! TATCAAACTTCAAGTTCCAT+AGG + chr2_1:5492619-5492638 Msa0190040:intron 30.0%
TTGTTGGAAGAGTTGAAATT+TGG - chr2_1:5492655-5492674 None:intergenic 30.0%
! TTTATGGTTGAAGCATTTGT+TGG - chr2_1:5492671-5492690 None:intergenic 30.0%
!! ATGCTACTTGTGAACTTTTA+TGG - chr2_1:5492687-5492706 None:intergenic 30.0%
TCAGGTTATTGTGTTCTAAT+GGG - chr2_1:5492793-5492812 None:intergenic 30.0%
! TTCAGGTTATTGTGTTCTAA+TGG - chr2_1:5492794-5492813 None:intergenic 30.0%
AATGATAGAAGATCTACTTC+AGG - chr2_1:5492811-5492830 None:intergenic 30.0%
TGGATATTCATATGCAGATT+GGG - chr2_1:5492845-5492864 None:intergenic 30.0%
TTGGATATTCATATGCAGAT+TGG - chr2_1:5492846-5492865 None:intergenic 30.0%
AATATCCAACAATACTGGTA+TGG + chr2_1:5492857-5492876 Msa0190040:intron 30.0%
ATATCCAACAATACTGGTAT+GGG + chr2_1:5492858-5492877 Msa0190040:intron 30.0%
!! CAATAAACACGTCATTTTCT+AGG + chr2_1:5492887-5492906 Msa0190040:intron 30.0%
GGATCTTGAGGTATATTAAA+AGG - chr2_1:5492916-5492935 None:intergenic 30.0%
GCAGATATAAGTAGTTAGTT+GGG - chr2_1:5493043-5493062 None:intergenic 30.0%
! GTGAAGCTTTTACATAATCA+AGG - chr2_1:5493084-5493103 None:intergenic 30.0%
TATGTAAAAGCTTCACATTG+GGG + chr2_1:5493088-5493107 Msa0190040:intron 30.0%
!! GGTTGATTGCGTTATTTTAT+TGG - chr2_1:5493228-5493247 None:intergenic 30.0%
AATGGTTCAAATAGAGGAAT+TGG + chr2_1:5493390-5493409 Msa0190040:intron 30.0%
!! TACAGATGTTACTTTCTTTG+AGG - chr2_1:5493469-5493488 None:intergenic 30.0%
AGACAAAAACGATTTGTAGA+TGG + chr2_1:5493490-5493509 Msa0190040:intron 30.0%
TTAGGAAACAAGAGAGAATT+GGG + chr2_1:5493664-5493683 Msa0190040:intron 30.0%
!!! CAATGACCTTTGAAATTTTG+GGG - chr2_1:5493757-5493776 None:intergenic 30.0%
TCAAAGGTCATTGATCAATA+AGG + chr2_1:5493764-5493783 Msa0190040:intron 30.0%
GATACCATGAGAAATCAAAT+TGG + chr2_1:5493872-5493891 Msa0190040:intron 30.0%
! AACTCCAATTTGATTTCTCA+TGG - chr2_1:5493879-5493898 None:intergenic 30.0%
ATTGTGCATTCTGATATTTG+GGG - chr2_1:5494113-5494132 None:intergenic 30.0%
ATCAGAATGCACAATATCAA+AGG + chr2_1:5494118-5494137 Msa0190040:intron 30.0%
CCAAAGAACAGGAAATAAAT+TGG - chr2_1:5494379-5494398 None:intergenic 30.0%
CCAATTTATTTCCTGTTCTT+TGG + chr2_1:5494376-5494395 Msa0190040:intron 30.0%
!! GTAATGCTGTGAAGTATTTT+AGG + chr2_1:5494582-5494601 Msa0190040:intron 30.0%
!!! GGATCATGGATTTTTTATTC+GGG - chr2_1:5494664-5494683 None:intergenic 30.0%
!!! GGGATCATGGATTTTTTATT+CGG - chr2_1:5494665-5494684 None:intergenic 30.0%
TTTGCTTATCTCACTCTATA+GGG - chr2_1:5494686-5494705 None:intergenic 30.0%
ATTTGCTTATCTCACTCTAT+AGG - chr2_1:5494687-5494706 None:intergenic 30.0%
! GACCAAACTTGAAACATTTT+GGG + chr2_1:5494734-5494753 Msa0190040:intron 30.0%
CAGTTATCACTATTGTTGAA+CGG - chr2_1:5494805-5494824 None:intergenic 30.0%
! TTTTTGTTCAAGGTTCTGTT+GGG - chr2_1:5495031-5495050 None:intergenic 30.0%
! GACTGCATTTAAAACAACAA+TGG + chr2_1:5495095-5495114 Msa0190040:intron 30.0%
TCATTCTAAATTACTCAAGC+TGG - chr2_1:5495191-5495210 None:intergenic 30.0%
! ATCAATATCTAAAACCCGTA+CGG - chr2_1:5495401-5495420 None:intergenic 30.0%
CATGTAAATGATCTTATGAG+TGG - chr2_1:5495620-5495639 None:intergenic 30.0%
!! AATGTTAACTTGTGCTCTTA+AGG + chr2_1:5495982-5496001 Msa0190040:intron 30.0%
ACAAGTTTATAAGCCTAATG+TGG + chr2_1:5496006-5496025 Msa0190040:intron 30.0%
CTCTCCGTAATAAATATCTA+AGG + chr2_1:5496190-5496209 Msa0190040:intron 30.0%
TCTAAATGCGACAGTTAAAA+AGG + chr2_1:5496287-5496306 Msa0190040:intron 30.0%
CTAACTAGATATTGAACCTA+TGG + chr2_1:5496354-5496373 Msa0190040:intron 30.0%
TGTTAAATATTACGGGACAT+AGG + chr2_1:5496612-5496631 Msa0190040:intron 30.0%
AAGATAAGAAAAGTAGAACC+TGG - chr2_1:5496761-5496780 None:intergenic 30.0%
TAGTCAATGACTCATCAAAA+TGG + chr2_1:5497101-5497120 Msa0190040:three_prime_UTR 30.0%
GAGTCCAATAGTATAGATAT+TGG - chr2_1:5497182-5497201 None:intergenic 30.0%
ATGGTCAATTTATTGATCGT+AGG + chr2_1:5497344-5497363 Msa0190040:three_prime_UTR 30.0%
CGATTAAAACCAGATTGAAT+TGG - chr2_1:5497726-5497745 None:intergenic 30.0%
CTTTCTGTTCAGTTAAAAGT+CGG + chr2_1:5497820-5497839 Msa0190040:three_prime_UTR 30.0%
CTGAATTGTCCAAATAAGAA+CGG - chr2_1:5497973-5497992 None:intergenic 30.0%
! TTCTTATTTGGACAATTCAG+AGG + chr2_1:5497973-5497992 Msa0190040:three_prime_UTR 30.0%
CAACACTAAACATTAGGAAT+TGG - chr2_1:5498029-5498048 None:intergenic 30.0%
!!! TGACTGACAATTTTGTTGTT+CGG + chr2_1:5498089-5498108 Msa0190040:three_prime_UTR 30.0%
TGTTCGGTTCATTATTAAAC+AGG + chr2_1:5498105-5498124 Msa0190040:three_prime_UTR 30.0%
! TAAACAGGTGACACTTTTAT+TGG + chr2_1:5498120-5498139 Msa0190040:three_prime_UTR 30.0%
! AACGTCTCAAAAGATTTTGA+AGG + chr2_1:5498186-5498205 Msa0190040:three_prime_UTR 30.0%
! ACGTCTCAAAAGATTTTGAA+GGG + chr2_1:5498187-5498206 Msa0190040:three_prime_UTR 30.0%
TGAAACTCAATCAATCCCTT+GGG - chr2_1:5483493-5483512 None:intergenic 35.0%
! ATTCAGAAAGTTTTACGGAG+AGG + chr2_1:5483540-5483559 Msa0190040:CDS 35.0%
ACTTCCTCATAGAAATCTAC+CGG - chr2_1:5483646-5483665 None:intergenic 35.0%
!!! TTGGTCTTACTTCCACTTTT+TGG + chr2_1:5483671-5483690 Msa0190040:CDS 35.0%
!! CATGTTTTATTGAAGGGAAC+AGG + chr2_1:5483744-5483763 Msa0190040:intron 35.0%
!!! TTTTTGGTGTTTTTCTGGTG+GGG - chr2_1:5483826-5483845 None:intergenic 35.0%
!! GATTTTCAAGGAGTGACTTT+TGG + chr2_1:5484095-5484114 Msa0190040:intron 35.0%
! ATGGTAGTCGATTCCTTAAA+TGG + chr2_1:5484136-5484155 Msa0190040:intron 35.0%
!!! ATTTTTTCTACCTCCATAGG+AGG + chr2_1:5484338-5484357 Msa0190040:intron 35.0%
!!! TTTTTTCTACCTCCATAGGA+GGG + chr2_1:5484339-5484358 Msa0190040:intron 35.0%
CAGCTTGCAAAAATTTCCTT+AGG - chr2_1:5484419-5484438 None:intergenic 35.0%
ACTTTAATATGAAGTAGGCC+AGG - chr2_1:5484491-5484510 None:intergenic 35.0%
GGATAATACACAATATGTGC+AGG + chr2_1:5484609-5484628 Msa0190040:intron 35.0%
TTTGAATTTCTCTGGTCACT+AGG + chr2_1:5484675-5484694 Msa0190040:intron 35.0%
!!! AGGGCTTTGCATTTTTTTGA+TGG + chr2_1:5484987-5485006 Msa0190040:CDS 35.0%
GACACTTGAAAGAACAAGAA+TGG - chr2_1:5485015-5485034 None:intergenic 35.0%
! TTGTTCTTTCAAGTGTCAGT+GGG + chr2_1:5485018-5485037 Msa0190040:CDS 35.0%
! ACCTGATTTAAAACTACCCA+CGG - chr2_1:5485140-5485159 None:intergenic 35.0%
!! AAAGGCGTTAATGTGTTACA+TGG + chr2_1:5485588-5485607 Msa0190040:intron 35.0%
TTGTGGCAAAACCATATCAT+CGG + chr2_1:5486333-5486352 Msa0190040:CDS 35.0%
TACATTCCCTTCTATGCATT+AGG - chr2_1:5486430-5486449 None:intergenic 35.0%
GGAATGTATTATAGGGCTTT+AGG + chr2_1:5486442-5486461 Msa0190040:intron 35.0%
CACGGAAGAAAGAAAATGTA+AGG + chr2_1:5486492-5486511 Msa0190040:intron 35.0%
GAAAAGAGAGACACAATTGT+GGG + chr2_1:5486514-5486533 Msa0190040:intron 35.0%
ATATTGGACTCTTCTACCTA+GGG + chr2_1:5486605-5486624 Msa0190040:intron 35.0%
GGTATCATATTTATCTGACG+GGG - chr2_1:5486677-5486696 None:intergenic 35.0%
GGGTATCATATTTATCTGAC+GGG - chr2_1:5486678-5486697 None:intergenic 35.0%
CGGGTATCATATTTATCTGA+CGG - chr2_1:5486679-5486698 None:intergenic 35.0%
CAGGTAATTATTCACAGGTA+TGG + chr2_1:5486733-5486752 Msa0190040:intron 35.0%
GTAATTATTCACAGGTATGG+AGG + chr2_1:5486736-5486755 Msa0190040:intron 35.0%
TTAACACAACCCCACTAAAT+TGG + chr2_1:5486770-5486789 Msa0190040:intron 35.0%
ACCTCAAAAGCCAATTTAGT+GGG - chr2_1:5486783-5486802 None:intergenic 35.0%
AACCTCAAAAGCCAATTTAG+TGG - chr2_1:5486784-5486803 None:intergenic 35.0%
!!! CTAAATTGGCTTTTGAGGTT+AGG + chr2_1:5486784-5486803 Msa0190040:intron 35.0%
ATGACATTGTTTACAAGTGG+GGG - chr2_1:5486815-5486834 None:intergenic 35.0%
GATGACATTGTTTACAAGTG+GGG - chr2_1:5486816-5486835 None:intergenic 35.0%
!!! GTTTTTTTCCCTATCAATCG+GGG + chr2_1:5486855-5486874 Msa0190040:intron 35.0%
AATGTTGGAGTAAACCAACA+CGG - chr2_1:5486943-5486962 None:intergenic 35.0%
CAACAACAGTAGGACAAATA+GGG - chr2_1:5486966-5486985 None:intergenic 35.0%
TCAACAACAGTAGGACAAAT+AGG - chr2_1:5486967-5486986 None:intergenic 35.0%
AAAAACTGCTCAACAACAGT+AGG - chr2_1:5486976-5486995 None:intergenic 35.0%
! AAAGCTAGCTTGTACAGTTT+GGG - chr2_1:5487196-5487215 None:intergenic 35.0%
! TAAAGCTAGCTTGTACAGTT+TGG - chr2_1:5487197-5487216 None:intergenic 35.0%
!! GATGAATAACTGGTTGGTTT+GGG - chr2_1:5487386-5487405 None:intergenic 35.0%
! TGATGAATAACTGGTTGGTT+TGG - chr2_1:5487387-5487406 None:intergenic 35.0%
!! TTCATCAATTTGGTTCGGTT+TGG + chr2_1:5487400-5487419 Msa0190040:intron 35.0%
!! TCATCAATTTGGTTCGGTTT+GGG + chr2_1:5487401-5487420 Msa0190040:intron 35.0%
CGATGGGATTTACACATTTA+TGG - chr2_1:5487434-5487453 None:intergenic 35.0%
!! GTACATAGATTGGTTTCGAT+GGG - chr2_1:5487450-5487469 None:intergenic 35.0%
!! AGTACATAGATTGGTTTCGA+TGG - chr2_1:5487451-5487470 None:intergenic 35.0%
! CCGATCAAAAGTACATAGAT+TGG - chr2_1:5487460-5487479 None:intergenic 35.0%
! CTATGTACTTTTGATCGGTT+TGG + chr2_1:5487462-5487481 Msa0190040:intron 35.0%
TAACTGCCTAATAACTCCTA+GGG - chr2_1:5487528-5487547 None:intergenic 35.0%
ATAACTGCCTAATAACTCCT+AGG - chr2_1:5487529-5487548 None:intergenic 35.0%
TGTCTTCACATTAGTTGAGA+CGG + chr2_1:5487626-5487645 Msa0190040:intron 35.0%
TGATGACAATGGTTATCCAT+GGG + chr2_1:5487656-5487675 Msa0190040:intron 35.0%
TATCATACTACTTGTACCCA+TGG - chr2_1:5487675-5487694 None:intergenic 35.0%
CATATTTATCTAACAGGGCA+GGG - chr2_1:5487703-5487722 None:intergenic 35.0%
GGGTACCATATTTATCTAAC+AGG - chr2_1:5487709-5487728 None:intergenic 35.0%
! TACAGGTAATCCAAGAGTTT+TGG + chr2_1:5487761-5487780 Msa0190040:intron 35.0%
! ACAGGTAATCCAAGAGTTTT+GGG + chr2_1:5487762-5487781 Msa0190040:intron 35.0%
AAATCAGGTGTGTATTTGCA+TGG - chr2_1:5487988-5488007 None:intergenic 35.0%
!! ATACACACCTGATTTTTGAG+TGG + chr2_1:5487993-5488012 Msa0190040:intron 35.0%
!!! TACACACCTGATTTTTGAGT+GGG + chr2_1:5487994-5488013 Msa0190040:intron 35.0%
CGGTCGTAAATAGTCTAATT+AGG + chr2_1:5488100-5488119 Msa0190040:intron 35.0%
GAGAGCTTGAGAACTAATTA+AGG - chr2_1:5488144-5488163 None:intergenic 35.0%
AGAGATGCATGAACAAGAAT+TGG - chr2_1:5488248-5488267 None:intergenic 35.0%
AAACATACAACACGGCAAAA+GGG - chr2_1:5488463-5488482 None:intergenic 35.0%
AAAACATACAACACGGCAAA+AGG - chr2_1:5488464-5488483 None:intergenic 35.0%
! CAAAAAGCACAACAAAACCA+AGG - chr2_1:5488512-5488531 None:intergenic 35.0%
!!! CTTGGTTTTGTTGTGCTTTT+TGG + chr2_1:5488510-5488529 Msa0190040:intron 35.0%
AGGTATAAATTTCCGTGCTA+TGG - chr2_1:5488923-5488942 None:intergenic 35.0%
GCAAAGAACACATGAATTCA+AGG - chr2_1:5488988-5489007 None:intergenic 35.0%
CCAATAAAGGTGAGAAATGA+AGG - chr2_1:5489024-5489043 None:intergenic 35.0%
CCTTCATTTCTCACCTTTAT+TGG + chr2_1:5489021-5489040 Msa0190040:intron 35.0%
! AACTCTTATCAGGCTTTGTA+AGG + chr2_1:5489174-5489193 Msa0190040:intron 35.0%
GATAAGAGTTCATAAAGAGG+AGG - chr2_1:5489209-5489228 None:intergenic 35.0%
!! GCTTGGTGCGTATATATAAA+TGG + chr2_1:5489300-5489319 Msa0190040:intron 35.0%
GGTGCGTATATATAAATGGT+AGG + chr2_1:5489304-5489323 Msa0190040:intron 35.0%
TTGAGGGTTGGAAAATATGA+GGG - chr2_1:5489387-5489406 None:intergenic 35.0%
TTTGAGGGTTGGAAAATATG+AGG - chr2_1:5489388-5489407 None:intergenic 35.0%
!! TAAGGCTTTGTTTGCAAGTT+TGG - chr2_1:5489431-5489450 None:intergenic 35.0%
AAACTTGCAAACAAAGCCTT+AGG + chr2_1:5489430-5489449 Msa0190040:intron 35.0%
AACTTCATTGCGTATTATGG+TGG - chr2_1:5489502-5489521 None:intergenic 35.0%
CATACTTACTAACTTCACTC+GGG - chr2_1:5490066-5490085 None:intergenic 35.0%
GCATACTTACTAACTTCACT+CGG - chr2_1:5490067-5490086 None:intergenic 35.0%
! TGCAAAAGCTGTTCTGAATT+TGG + chr2_1:5490185-5490204 Msa0190040:three_prime_UTR 35.0%
! AAAAGCTGTTCTGAATTTGG+AGG + chr2_1:5490188-5490207 Msa0190040:three_prime_UTR 35.0%
! AAATCAGGCTGAGAATTTTG+GGG + chr2_1:5490397-5490416 Msa0190040:three_prime_UTR 35.0%
TTTAAGCTATCATGTTGGGT+TGG + chr2_1:5490438-5490457 Msa0190040:three_prime_UTR 35.0%
AGTTAGATCACATCAAAACC+AGG - chr2_1:5490517-5490536 None:intergenic 35.0%
GATCTAACTGTATGGAATAG+AGG + chr2_1:5490528-5490547 Msa0190040:three_prime_UTR 35.0%
TCCATATTCAAAGATTGTGC+AGG + chr2_1:5490576-5490595 Msa0190040:three_prime_UTR 35.0%
TCCTGCACAATCTTTGAATA+TGG - chr2_1:5490580-5490599 None:intergenic 35.0%
AAAACCTTCAAAGATTGTGC+AGG + chr2_1:5490603-5490622 Msa0190040:three_prime_UTR 35.0%
AATACAACTCTCAAGGCTAA+AGG + chr2_1:5490932-5490951 Msa0190040:three_prime_UTR 35.0%
ATACAACTCTCAAGGCTAAA+GGG + chr2_1:5490933-5490952 Msa0190040:three_prime_UTR 35.0%
! GTGAGGATGTTATTTGTAAC+AGG - chr2_1:5491016-5491035 None:intergenic 35.0%
CCAAAGAGGAAAATTAGAGA+AGG - chr2_1:5491080-5491099 None:intergenic 35.0%
! CCTTCTCTAATTTTCCTCTT+TGG + chr2_1:5491077-5491096 Msa0190040:three_prime_UTR 35.0%
!! TTTGTCTCTGAGACTACAAA+TGG - chr2_1:5491188-5491207 None:intergenic 35.0%
TTTCTACACTCTCGAATTCT+AGG + chr2_1:5491238-5491257 Msa0190040:three_prime_UTR 35.0%
AAGTCCTAATAAACCACTTG+TGG + chr2_1:5491489-5491508 Msa0190040:three_prime_UTR 35.0%
TAATAAACCACTTGTGGCAT+CGG + chr2_1:5491495-5491514 Msa0190040:three_prime_UTR 35.0%
! GTTTGTTAACGACATGTCTA+AGG + chr2_1:5491548-5491567 Msa0190040:three_prime_UTR 35.0%
!! TTTTGGGTGAAGAATTTACG+AGG + chr2_1:5491649-5491668 Msa0190040:intron 35.0%
TTTGGGTGAAGAATTTACGA+GGG + chr2_1:5491650-5491669 Msa0190040:intron 35.0%
TTAGAACTGGCGAGAAAAAA+TGG + chr2_1:5491705-5491724 Msa0190040:three_prime_UTR 35.0%
TAGAACTGGCGAGAAAAAAT+GGG + chr2_1:5491706-5491725 Msa0190040:three_prime_UTR 35.0%
CTTGTAGGAAATAGCAAGTA+AGG - chr2_1:5491931-5491950 None:intergenic 35.0%
TTAAGTGACACATTCGACAA+AGG - chr2_1:5492237-5492256 None:intergenic 35.0%
TATATATGCTCCAACTTGAG+GGG - chr2_1:5492383-5492402 None:intergenic 35.0%
GATATATATGCTCCAACTTG+AGG - chr2_1:5492385-5492404 None:intergenic 35.0%
ATCTTCACAAAACCTCAATG+GGG - chr2_1:5492453-5492472 None:intergenic 35.0%
GATATCATCTACCTGATCAT+TGG + chr2_1:5492470-5492489 Msa0190040:intron 35.0%
TTTGTCCTCTCAAGAAAAAC+TGG + chr2_1:5492567-5492586 Msa0190040:intron 35.0%
! CAAATCCAGTTTTTCTTGAG+AGG - chr2_1:5492575-5492594 None:intergenic 35.0%
! GAGTTGAAATTTGGTGAACT+AGG - chr2_1:5492646-5492665 None:intergenic 35.0%
AAAAGCAAACTGTTGTTGCA+AGG - chr2_1:5492744-5492763 None:intergenic 35.0%
TGGGAGGAAACTTAATTTCA+TGG - chr2_1:5492774-5492793 None:intergenic 35.0%
GGCAGATATAAGTAGTTAGT+TGG - chr2_1:5493044-5493063 None:intergenic 35.0%
ACTAACTACTTATATCTGCC+TGG + chr2_1:5493044-5493063 Msa0190040:intron 35.0%
CTAACTACTTATATCTGCCT+GGG + chr2_1:5493045-5493064 Msa0190040:intron 35.0%
GAAGTAGCTTAGTCTCAAAA+AGG - chr2_1:5493201-5493220 None:intergenic 35.0%
GTAGTTGACATTGTTATCAC+AGG - chr2_1:5493302-5493321 None:intergenic 35.0%
! GTAGTTGATGTCACAAAGAA+AGG + chr2_1:5493438-5493457 Msa0190040:intron 35.0%
! CCAGAGTTCAAAAAAGGTAT+CGG - chr2_1:5493525-5493544 None:intergenic 35.0%
!! CTGTCAAGTGTGTATTTTTG+GGG - chr2_1:5493552-5493571 None:intergenic 35.0%
! GCTGTCAAGTGTGTATTTTT+GGG - chr2_1:5493553-5493572 None:intergenic 35.0%
! AGCTGTCAAGTGTGTATTTT+TGG - chr2_1:5493554-5493573 None:intergenic 35.0%
TCGAAGTGGGACATAATAAA+AGG + chr2_1:5493636-5493655 Msa0190040:intron 35.0%
CGAAGTGGGACATAATAAAA+GGG + chr2_1:5493637-5493656 Msa0190040:intron 35.0%
GAAGTGGGACATAATAAAAG+GGG + chr2_1:5493638-5493657 Msa0190040:intron 35.0%
ACATAATAAAAGGGGTCGTT+AGG + chr2_1:5493646-5493665 Msa0190040:intron 35.0%
GTTAGGAAACAAGAGAGAAT+TGG + chr2_1:5493663-5493682 Msa0190040:intron 35.0%
!!! TTTGAAATTTTGGGGTGATG+CGG - chr2_1:5493749-5493768 None:intergenic 35.0%
CTTTCATCGATGATTTCTCT+CGG - chr2_1:5494046-5494065 None:intergenic 35.0%
GCAAAAACATTGCATACAGT+TGG + chr2_1:5494307-5494326 Msa0190040:intron 35.0%
AACAGGAAATAAATTGGAGC+AGG - chr2_1:5494373-5494392 None:intergenic 35.0%
!! ATGCTGTGAAGTATTTTAGG+AGG + chr2_1:5494585-5494604 Msa0190040:intron 35.0%
!! TGCTGTGAAGTATTTTAGGA+GGG + chr2_1:5494586-5494605 Msa0190040:intron 35.0%
TTGCTTATCTCACTCTATAG+GGG - chr2_1:5494685-5494704 None:intergenic 35.0%
! CGACCAAACTTGAAACATTT+TGG + chr2_1:5494733-5494752 Msa0190040:intron 35.0%
!! TGCCCAAAATGTTTCAAGTT+TGG - chr2_1:5494739-5494758 None:intergenic 35.0%
!!! TTTTGAGGTTTCCTTGTTGT+TGG - chr2_1:5494880-5494899 None:intergenic 35.0%
!!! CGTTTGAGAAGGTTTTTTTG+AGG - chr2_1:5494895-5494914 None:intergenic 35.0%
! GTTTTTGTTCAAGGTTCTGT+TGG - chr2_1:5495032-5495051 None:intergenic 35.0%
GAACCTTGAACAAAAACTGA+CGG + chr2_1:5495035-5495054 Msa0190040:intron 35.0%
AGAATAATCAACAGTGTCCA+AGG + chr2_1:5495308-5495327 Msa0190040:intron 35.0%
! ACAGTGTCCAAGGAATTTTA+AGG + chr2_1:5495318-5495337 Msa0190040:intron 35.0%
ATATTGATGCGTCGAAAACA+GGG + chr2_1:5495413-5495432 Msa0190040:intron 35.0%
TATGAAACACAGACACATCT+AGG - chr2_1:5495450-5495469 None:intergenic 35.0%
! CTGTTACGTCTTGCATATTT+TGG + chr2_1:5495470-5495489 Msa0190040:intron 35.0%
TATTTATCTCAATGAGGGCA+TGG + chr2_1:5495563-5495582 Msa0190040:intron 35.0%
! TTGAGACTAACGTGATTTTG+TGG + chr2_1:5495663-5495682 Msa0190040:intron 35.0%
TTTGTTGATGCATGATGGTA+AGG + chr2_1:5495720-5495739 Msa0190040:three_prime_UTR 35.0%
TGACAATTAAAAAGGAACGG+AGG - chr2_1:5495862-5495881 None:intergenic 35.0%
ATATCTTAACATGTGCCCTA+AGG + chr2_1:5496121-5496140 Msa0190040:intron 35.0%
TATCTTAACATGTGCCCTAA+GGG + chr2_1:5496122-5496141 Msa0190040:intron 35.0%
ATGCGACAGTTAAAAAGGAA+CGG + chr2_1:5496292-5496311 Msa0190040:intron 35.0%
!! TATTGAACCTATGGTTTGCT+CGG + chr2_1:5496363-5496382 Msa0190040:intron 35.0%
GCTCGGAAGAATAATATCTA+AGG + chr2_1:5496380-5496399 Msa0190040:intron 35.0%
! TGCACAGATACGATATGTTT+TGG - chr2_1:5496479-5496498 None:intergenic 35.0%
ATATCGTATCTGTGCATCAT+AGG + chr2_1:5496483-5496502 Msa0190040:intron 35.0%
TAAAGATGCATACGTCTTGA+AGG - chr2_1:5496786-5496805 None:intergenic 35.0%
! ATGACTCATGGTTTTCTAGA+AGG - chr2_1:5497139-5497158 None:intergenic 35.0%
CATGAGTCATACCCTAAAAT+GGG + chr2_1:5497149-5497168 Msa0190040:three_prime_UTR 35.0%
GGACCCAATATCTATACTAT+TGG + chr2_1:5497175-5497194 Msa0190040:three_prime_UTR 35.0%
GTCAATTTATTGATCGTAGG+TGG + chr2_1:5497347-5497366 Msa0190040:three_prime_UTR 35.0%
GTGGATCAAGTAGTTATATG+TGG + chr2_1:5497366-5497385 Msa0190040:three_prime_UTR 35.0%
GATCAAGTAGTTATATGTGG+TGG + chr2_1:5497369-5497388 Msa0190040:three_prime_UTR 35.0%
AAGTAGTTATATGTGGTGGT+TGG + chr2_1:5497373-5497392 Msa0190040:three_prime_UTR 35.0%
GTAATTGAAGTGGTAGTTTG+TGG + chr2_1:5497557-5497576 Msa0190040:three_prime_UTR 35.0%
AAATGTTTCAACCTCCTAGA+TGG + chr2_1:5497775-5497794 Msa0190040:three_prime_UTR 35.0%
AGTCAATTCATAAACCCCAA+GGG - chr2_1:5497802-5497821 None:intergenic 35.0%
AAGTCAATTCATAAACCCCA+AGG - chr2_1:5497803-5497822 None:intergenic 35.0%
AACGACCTAAAAATTGACGA+CGG - chr2_1:5497856-5497875 None:intergenic 35.0%
ATTGTCCAAATAAGAACGGA+CGG - chr2_1:5497969-5497988 None:intergenic 35.0%
TTGGATTAAATGCAGTCAGT+GGG - chr2_1:5498010-5498029 None:intergenic 35.0%
ATTGGATTAAATGCAGTCAG+TGG - chr2_1:5498011-5498030 None:intergenic 35.0%
! ACGTTTTCACGAACATTCAT+CGG - chr2_1:5498171-5498190 None:intergenic 35.0%
TTGAATCCTCGGAGAAGTTA+CGG - chr2_1:5483372-5483391 None:intergenic 40.0%
GTGAAACTCAATCAATCCCT+TGG - chr2_1:5483494-5483513 None:intergenic 40.0%
! GAGGGATCGAAACAATTTTG+CGG + chr2_1:5483613-5483632 Msa0190040:CDS 40.0%
!! ACAATTTTGCGGATTGTTCC+CGG + chr2_1:5483624-5483643 Msa0190040:CDS 40.0%
CTTCCTCATAGAAATCTACC+GGG - chr2_1:5483645-5483664 None:intergenic 40.0%
CTTGCAGTCTTTCCAAAAAG+TGG - chr2_1:5483686-5483705 None:intergenic 40.0%
!! CACTTTTTGGAAAGACTGCA+AGG + chr2_1:5483684-5483703 Msa0190040:CDS 40.0%
! TTTTATTGAAGGGAACAGGG+TGG + chr2_1:5483748-5483767 Msa0190040:intron 40.0%
AATGGCTATGATTGTCTCCT+GGG - chr2_1:5483977-5483996 None:intergenic 40.0%
TAAGGAATCGACTACCATTG+TGG - chr2_1:5484134-5484153 None:intergenic 40.0%
TTAGTTGTCAAGGAGAGAGA+GGG + chr2_1:5484280-5484299 Msa0190040:intron 40.0%
TGCAAAAATTTCCTTAGGCC+AGG - chr2_1:5484414-5484433 None:intergenic 40.0%
! TTTTGCAAGCTGCCTTTCAT+AGG + chr2_1:5484427-5484446 Msa0190040:intron 40.0%
!!! ATAGGCCTATTTTTTTGGCC+TGG + chr2_1:5484445-5484464 Msa0190040:intron 40.0%
ACAAGCCAGGCCAAAAAAAT+AGG - chr2_1:5484453-5484472 None:intergenic 40.0%
! GGTATGCTTTTAAACAAGCC+AGG - chr2_1:5484466-5484485 None:intergenic 40.0%
! TGTTTAAAAGCATACCTGCC+TGG + chr2_1:5484470-5484489 Msa0190040:intron 40.0%
! TTTAAGGTGAATAAGTGGGG+TGG - chr2_1:5484655-5484674 None:intergenic 40.0%
CAACAAAGAGGATTTGGATG+GGG - chr2_1:5484853-5484872 None:intergenic 40.0%
CCAACAAAGAGGATTTGGAT+GGG - chr2_1:5484854-5484873 None:intergenic 40.0%
ACCAACAAAGAGGATTTGGA+TGG - chr2_1:5484855-5484874 None:intergenic 40.0%
ATTTCACCATTGACGTTCAG+AGG + chr2_1:5484967-5484986 Msa0190040:CDS 40.0%
TTTCACCATTGACGTTCAGA+GGG + chr2_1:5484968-5484987 Msa0190040:CDS 40.0%
! CTTGTTCTTTCAAGTGTCAG+TGG + chr2_1:5485017-5485036 Msa0190040:CDS 40.0%
! TGTTCTTTCAAGTGTCAGTG+GGG + chr2_1:5485019-5485038 Msa0190040:CDS 40.0%
ATAAGAAAGGAGCAAATCCG+TGG + chr2_1:5485120-5485139 Msa0190040:CDS 40.0%
TAAGAAAGGAGCAAATCCGT+GGG + chr2_1:5485121-5485140 Msa0190040:CDS 40.0%
!!! TCCGTGGGTAGTTTTAAATC+AGG + chr2_1:5485136-5485155 Msa0190040:CDS 40.0%
AGGTAAACTTGAGACTGATG+AGG + chr2_1:5485156-5485175 Msa0190040:intron 40.0%
GGTAAACTTGAGACTGATGA+GGG + chr2_1:5485157-5485176 Msa0190040:intron 40.0%
CGAGATACTGTGATACAACA+CGG + chr2_1:5485228-5485247 Msa0190040:intron 40.0%
GAGATACTGTGATACAACAC+GGG + chr2_1:5485229-5485248 Msa0190040:intron 40.0%
! TTGTGTGGTGGTGATATAAG+CGG + chr2_1:5485287-5485306 Msa0190040:intron 40.0%
! TTTTAGGCAAGATCCAAGCT+TGG + chr2_1:5486004-5486023 Msa0190040:intron 40.0%
TTTAGGCAAGATCCAAGCTT+GGG + chr2_1:5486005-5486024 Msa0190040:intron 40.0%
GCAACAATCCAAGTTCCAAT+AGG + chr2_1:5486037-5486056 Msa0190040:CDS 40.0%
ATGCCAACGAAACTTAACCA+CGG - chr2_1:5486161-5486180 None:intergenic 40.0%
CATATCTGCTGGAACTTCTT+CGG - chr2_1:5486233-5486252 None:intergenic 40.0%
!! AAGCCTTGGTGTTAGACAAA+AGG + chr2_1:5486254-5486273 Msa0190040:CDS 40.0%
ACTCATAGAAACTGTCTCAG+AGG + chr2_1:5486282-5486301 Msa0190040:CDS 40.0%
TGATAGGCCTAATGCATAGA+AGG + chr2_1:5486420-5486439 Msa0190040:intron 40.0%
GATAGGCCTAATGCATAGAA+GGG + chr2_1:5486421-5486440 Msa0190040:intron 40.0%
GGAAAAGAGAGACACAATTG+TGG + chr2_1:5486513-5486532 Msa0190040:intron 40.0%
GATATTGGACTCTTCTACCT+AGG + chr2_1:5486604-5486623 Msa0190040:intron 40.0%
TTCTACCTAGGGATGTCAAT+GGG + chr2_1:5486616-5486635 Msa0190040:intron 40.0%
TCAATGGGTATCATGGGTAA+GGG + chr2_1:5486631-5486650 Msa0190040:intron 40.0%
TCATATTTATCTGACGGGGA+GGG - chr2_1:5486673-5486692 None:intergenic 40.0%
ATCATATTTATCTGACGGGG+AGG - chr2_1:5486674-5486693 None:intergenic 40.0%
CCTCAAAAGCCAATTTAGTG+GGG - chr2_1:5486782-5486801 None:intergenic 40.0%
TGACATTGTTTACAAGTGGG+GGG - chr2_1:5486814-5486833 None:intergenic 40.0%
GTAGGACAAATAGGGAATGT+TGG - chr2_1:5486958-5486977 None:intergenic 40.0%
GATTGCAAAAGAGGGGAAAT+CGG - chr2_1:5487040-5487059 None:intergenic 40.0%
CGAAACTGATTGCAAAAGAG+GGG - chr2_1:5487047-5487066 None:intergenic 40.0%
GCGAAACTGATTGCAAAAGA+GGG - chr2_1:5487048-5487067 None:intergenic 40.0%
AGCGAAACTGATTGCAAAAG+AGG - chr2_1:5487049-5487068 None:intergenic 40.0%
GAAATAACACTTGGAAAGGG+TGG - chr2_1:5487099-5487118 None:intergenic 40.0%
AGCTTGTACAGTTTGGGAAA+GGG - chr2_1:5487190-5487209 None:intergenic 40.0%
! TAGCTTGTACAGTTTGGGAA+AGG - chr2_1:5487191-5487210 None:intergenic 40.0%
AAACACCCCTAGGAGTTATT+AGG + chr2_1:5487519-5487538 Msa0190040:intron 40.0%
AACTGCCTAATAACTCCTAG+GGG - chr2_1:5487527-5487546 None:intergenic 40.0%
GTGATGACAATGGTTATCCA+TGG + chr2_1:5487655-5487674 Msa0190040:intron 40.0%
CCATATTTATCTAACAGGGC+AGG - chr2_1:5487704-5487723 None:intergenic 40.0%
CCTGCCCTGTTAGATAAATA+TGG + chr2_1:5487701-5487720 Msa0190040:intron 40.0%
TCTTGGATTACCTGTATTGC+GGG - chr2_1:5487757-5487776 None:intergenic 40.0%
CTCTTGGATTACCTGTATTG+CGG - chr2_1:5487758-5487777 None:intergenic 40.0%
! CAGGTAATCCAAGAGTTTTG+GGG + chr2_1:5487763-5487782 Msa0190040:intron 40.0%
!!! AAGAGTTTTGGGGTATCCAT+GGG + chr2_1:5487773-5487792 Msa0190040:intron 40.0%
!! AAAAAATTTGAGGGTGCTGC+AGG - chr2_1:5488299-5488318 None:intergenic 40.0%
TTGAGCAGCAAATTCAAGAG+AGG - chr2_1:5488354-5488373 None:intergenic 40.0%
TCATAAAAGCGGCAAGCATA+TGG - chr2_1:5488388-5488407 None:intergenic 40.0%
CTGACACATGGTCATAAAAG+CGG - chr2_1:5488399-5488418 None:intergenic 40.0%
TGACCATGTGTCAGATTCTA+AGG + chr2_1:5488405-5488424 Msa0190040:intron 40.0%
GTATCATTCACGTTGTCGTT+TGG + chr2_1:5488736-5488755 Msa0190040:intron 40.0%
TTATGTAGGAAGCAGTTCGT+AGG + chr2_1:5488893-5488912 Msa0190040:intron 40.0%
TATGTAGGAAGCAGTTCGTA+GGG + chr2_1:5488894-5488913 Msa0190040:intron 40.0%
CATGGGTAGTGCTTTCAAAA+AGG + chr2_1:5488948-5488967 Msa0190040:CDS 40.0%
CTAGCTCATCCTTACAAAAC+CGG + chr2_1:5489119-5489138 Msa0190040:intron 40.0%
!! CTTACAAAGCCGGTTTTGTA+AGG - chr2_1:5489131-5489150 None:intergenic 40.0%
! CTTACAAAACCGGCTTTGTA+AGG + chr2_1:5489129-5489148 Msa0190040:intron 40.0%
AAGGCCCACATTGAATAGAT+AGG - chr2_1:5489238-5489257 None:intergenic 40.0%
TATCTATTCAATGTGGGCCT+TGG + chr2_1:5489237-5489256 Msa0190040:intron 40.0%
ATCTATTCAATGTGGGCCTT+GGG + chr2_1:5489238-5489257 Msa0190040:intron 40.0%
CCTAACTCCTCCTTATAATC+GGG - chr2_1:5489333-5489352 None:intergenic 40.0%
GCCTAACTCCTCCTTATAAT+CGG - chr2_1:5489334-5489353 None:intergenic 40.0%
! CTTTGTTTGCAAGTTTGGAG+GGG - chr2_1:5489426-5489445 None:intergenic 40.0%
!! GCTTTGTTTGCAAGTTTGGA+GGG - chr2_1:5489427-5489446 None:intergenic 40.0%
TTGCAAACAAAGCCTTAGGA+GGG + chr2_1:5489434-5489453 Msa0190040:intron 40.0%
GTGACAAAATGAAGCAAGCA+TGG - chr2_1:5489474-5489493 None:intergenic 40.0%
ATCAATTGACGTGGCACTTA+TGG + chr2_1:5489542-5489561 Msa0190040:intron 40.0%
TTGTTCTCCTTGCTCTACAT+TGG - chr2_1:5489742-5489761 None:intergenic 40.0%
! GATTTGGTTGTTTAGGGGAT+GGG - chr2_1:5490322-5490341 None:intergenic 40.0%
! GTTGGCTTCGTAAGAACTAA+GGG + chr2_1:5490456-5490475 Msa0190040:three_prime_UTR 40.0%
! TTTTGTGGCTGTTAAGCAGA+GGG + chr2_1:5490661-5490680 Msa0190040:three_prime_UTR 40.0%
AAATTGAGTGCTCCTGAAGT+GGG - chr2_1:5490730-5490749 None:intergenic 40.0%
AAAATTGAGTGCTCCTGAAG+TGG - chr2_1:5490731-5490750 None:intergenic 40.0%
!!! CAGGAGCACTCAATTTTCAT+TGG + chr2_1:5490734-5490753 Msa0190040:three_prime_UTR 40.0%
! TTGTAGAGGATGGGAGTTTT+AGG + chr2_1:5490849-5490868 Msa0190040:three_prime_UTR 40.0%
! TGTAGAGGATGGGAGTTTTA+GGG + chr2_1:5490850-5490869 Msa0190040:three_prime_UTR 40.0%
TTGATTGCTAATGAGGCACA+AGG + chr2_1:5490900-5490919 Msa0190040:three_prime_UTR 40.0%
GGTACCTTACATGTTCTAGT+AGG - chr2_1:5491134-5491153 None:intergenic 40.0%
ACAAATGGAACCTTGTGCAA+AGG - chr2_1:5491173-5491192 None:intergenic 40.0%
TAGTCTCAGAGACAAACTCA+GGG + chr2_1:5491192-5491211 Msa0190040:three_prime_UTR 40.0%
GATGCCACAAGTGGTTTATT+AGG - chr2_1:5491496-5491515 None:intergenic 40.0%
!! CACATTTAAGGCGGGATTTT+TGG + chr2_1:5491522-5491541 Msa0190040:three_prime_UTR 40.0%
!! TTTAAGGCGGGATTTTTGGA+TGG + chr2_1:5491526-5491545 Msa0190040:three_prime_UTR 40.0%
! TCAAAAGGCGTACAACGTTA+TGG + chr2_1:5491840-5491859 Msa0190040:intron 40.0%
! CAAAAGGCGTACAACGTTAT+GGG + chr2_1:5491841-5491860 Msa0190040:intron 40.0%
CTGTGAATTGGATAATCCGA+GGG - chr2_1:5491886-5491905 None:intergenic 40.0%
ACTGTGAATTGGATAATCCG+AGG - chr2_1:5491887-5491906 None:intergenic 40.0%
!! GGTAGTGGATGGATTAATGA+AGG - chr2_1:5492160-5492179 None:intergenic 40.0%
TCGACAAAGGTGGAAATAAG+AGG - chr2_1:5492224-5492243 None:intergenic 40.0%
ATATATGCTCCAACTTGAGG+GGG - chr2_1:5492382-5492401 None:intergenic 40.0%
TCTTCACAAAACCTCAATGG+GGG - chr2_1:5492452-5492471 None:intergenic 40.0%
TTCAATGAGCTCCAATGATC+AGG - chr2_1:5492484-5492503 None:intergenic 40.0%
ATCATTGGAGCTCATTGAAG+AGG + chr2_1:5492485-5492504 Msa0190040:intron 40.0%
! ATTTGGTGAACTAGGTCCTA+TGG - chr2_1:5492638-5492657 None:intergenic 40.0%
AAGTAGCATGTGCCATAACA+CGG + chr2_1:5492698-5492717 Msa0190040:intron 40.0%
GGTTATTGTGTTCTAATGGG+AGG - chr2_1:5492790-5492809 None:intergenic 40.0%
TATTCATATGCAGATTGGGC+AGG - chr2_1:5492841-5492860 None:intergenic 40.0%
CGCTATCAACAAGCGAAATA+CGG + chr2_1:5492990-5493009 Msa0190040:intron 40.0%
TCTCGATATCTTGGAAGAGA+CGG - chr2_1:5493151-5493170 None:intergenic 40.0%
TCAGAACTACTTTGTGATCG+TGG + chr2_1:5493348-5493367 Msa0190040:intron 40.0%
GGGACAAATGGTTCAAATAG+AGG + chr2_1:5493384-5493403 Msa0190040:intron 40.0%
!!! CCGATACCTTTTTTGAACTC+TGG + chr2_1:5493522-5493541 Msa0190040:intron 40.0%
GGTACTCCAGAGTTCAAAAA+AGG - chr2_1:5493531-5493550 None:intergenic 40.0%
TAGAGCCAAAAACTCGAAGT+GGG + chr2_1:5493623-5493642 Msa0190040:intron 40.0%
!! TATGTCCCACTTCGAGTTTT+TGG - chr2_1:5493631-5493650 None:intergenic 40.0%
GCATCACCCCAAAATTTCAA+AGG + chr2_1:5493748-5493767 Msa0190040:intron 40.0%
! TTAGCGACACCATTTTGTTG+CGG + chr2_1:5493822-5493841 Msa0190040:intron 40.0%
! ATGATTTCTCTCGGTGTACT+TGG - chr2_1:5494037-5494056 None:intergenic 40.0%
GACTTAGATGACCCAAAAGA+TGG + chr2_1:5494266-5494285 Msa0190040:intron 40.0%
!! ACATTGCATACAGTTGGTGA+AGG + chr2_1:5494313-5494332 Msa0190040:intron 40.0%
!! CAGTTGGTGAAGGTAATTCA+AGG + chr2_1:5494323-5494342 Msa0190040:intron 40.0%
TCCAAGGATAGAGATGACAA+AGG + chr2_1:5494510-5494529 Msa0190040:intron 40.0%
ACCTTTGTCATCTCTATCCT+TGG - chr2_1:5494514-5494533 None:intergenic 40.0%
TGCCTTAGAACCATTAGCAA+GGG + chr2_1:5494560-5494579 Msa0190040:intron 40.0%
! TACCCTTGCTAATGGTTCTA+AGG - chr2_1:5494565-5494584 None:intergenic 40.0%
CTTGCTTCTGATCATGTAGT+TGG - chr2_1:5494639-5494658 None:intergenic 40.0%
!! TGTTTCAAGTTTGGTCGCAT+TGG - chr2_1:5494730-5494749 None:intergenic 40.0%
CACTATTGTTGAACGGCTTA+TGG - chr2_1:5494798-5494817 None:intergenic 40.0%
!!! CCTTGTTGTTGGTTTCCTTT+TGG - chr2_1:5494869-5494888 None:intergenic 40.0%
CCAAAAGGAAACCAACAACA+AGG + chr2_1:5494866-5494885 Msa0190040:intron 40.0%
ACTCTTGATCACGTTTGAGA+AGG - chr2_1:5494906-5494925 None:intergenic 40.0%
TGATCAAGAGTTGCAGAAAC+TGG + chr2_1:5494915-5494934 Msa0190040:intron 40.0%
! TGTTTTCGCTTCAGATGTGT+CGG - chr2_1:5494963-5494982 None:intergenic 40.0%
! TTTTATGGGTCTCACGTTTG+AGG - chr2_1:5494997-5495016 None:intergenic 40.0%
AAACGTGAGACCCATAAAAC+TGG + chr2_1:5494998-5495017 Msa0190040:intron 40.0%
CTTGAACAAAAACTGACGGA+GGG + chr2_1:5495039-5495058 Msa0190040:intron 40.0%
TTGAACAAAAACTGACGGAG+GGG + chr2_1:5495040-5495059 Msa0190040:intron 40.0%
AAACCCCAAAACCGAAACAA+CGG + chr2_1:5495138-5495157 Msa0190040:intron 40.0%
CGACACACCTTAAAATTCCT+TGG - chr2_1:5495328-5495347 None:intergenic 40.0%
GATATTGATGCGTCGAAAAC+AGG + chr2_1:5495412-5495431 Msa0190040:intron 40.0%
! AACACAGACACATCTAGGAT+TGG - chr2_1:5495445-5495464 None:intergenic 40.0%
AACCTGCATTTCCACAAGAA+AGG - chr2_1:5495695-5495714 None:intergenic 40.0%
! CATCGTTTGTTGATGCATGA+TGG + chr2_1:5495715-5495734 Msa0190040:three_prime_UTR 40.0%
!! AGTGTTAACTTGTGCCCTTA+GGG - chr2_1:5496139-5496158 None:intergenic 40.0%
!! TAGTGTTAACTTGTGCCCTT+AGG - chr2_1:5496140-5496159 None:intergenic 40.0%
GACAGTTAAAAAGGAACGGA+GGG + chr2_1:5496296-5496315 Msa0190040:intron 40.0%
TATTCTTCCGAGCAAACCAT+AGG - chr2_1:5496373-5496392 None:intergenic 40.0%
TCTTGAATGTCCTGCAAGTT+TGG - chr2_1:5496665-5496684 None:intergenic 40.0%
AAACTTGCAGGACATTCAAG+AGG + chr2_1:5496664-5496683 Msa0190040:intron 40.0%
TCGTGCTGGGCAAATAATAA+TGG + chr2_1:5496688-5496707 Msa0190040:three_prime_UTR 40.0%
!!! TACGTTTTTTGCAACCCACT+TGG + chr2_1:5496908-5496927 Msa0190040:three_prime_UTR 40.0%
!!! ACGTTTTTTGCAACCCACTT+GGG + chr2_1:5496909-5496928 Msa0190040:three_prime_UTR 40.0%
!!! CCATTTTAGGGTATGACTCA+TGG - chr2_1:5497151-5497170 None:intergenic 40.0%
CCATGAGTCATACCCTAAAA+TGG + chr2_1:5497148-5497167 Msa0190040:three_prime_UTR 40.0%
TAGTTATATGTGGTGGTTGG+AGG + chr2_1:5497376-5497395 Msa0190040:three_prime_UTR 40.0%
GTAGTCATAGTGGTGATTGA+TGG + chr2_1:5497398-5497417 Msa0190040:three_prime_UTR 40.0%
!! GTGATTGATGGTGGTAGTAT+TGG + chr2_1:5497410-5497429 Msa0190040:three_prime_UTR 40.0%
!! ATGGTGGTAGTATTGGTGAT+AGG + chr2_1:5497417-5497436 Msa0190040:three_prime_UTR 40.0%
AATTGGAGTAGTGGTCATGA+TGG + chr2_1:5497456-5497475 Msa0190040:three_prime_UTR 40.0%
! ATTGAAGTGGTAGTTTGTGG+TGG + chr2_1:5497560-5497579 Msa0190040:three_prime_UTR 40.0%
! TCACACCGTCGTCAATTTTT+AGG + chr2_1:5497848-5497867 Msa0190040:three_prime_UTR 40.0%
ATCAACCGTCCGTTCTTATT+TGG + chr2_1:5497961-5497980 Msa0190040:three_prime_UTR 40.0%
! CAGGTGACACTTTTATTGGT+CGG + chr2_1:5498124-5498143 Msa0190040:three_prime_UTR 40.0%
! TGACACTTTTATTGGTCGGT+TGG + chr2_1:5498128-5498147 Msa0190040:three_prime_UTR 40.0%
! TTTTCACGAACATTCATCGG+AGG - chr2_1:5498168-5498187 None:intergenic 40.0%
GTATTGTGGTACAATAGCCG+CGG - chr2_1:5483316-5483335 None:intergenic 45.0%
TGGAGGAACGTACTGTATTG+TGG - chr2_1:5483330-5483349 None:intergenic 45.0%
ACTTCTCCGAGGATTCAAAG+AGG + chr2_1:5483374-5483393 Msa0190040:intron 45.0%
! ACCTAAGCTGGTGTCAAATG+AGG + chr2_1:5483429-5483448 Msa0190040:intron 45.0%
ACCTCATTTGACACCAGCTT+AGG - chr2_1:5483433-5483452 None:intergenic 45.0%
! GTGAGGAACCTGTTTTATGC+AGG + chr2_1:5483451-5483470 Msa0190040:intron 45.0%
! GGAACCTGTTTTATGCAGGT+CGG + chr2_1:5483455-5483474 Msa0190040:intron 45.0%
! CAGAAAGTTTTACGGAGAGG+AGG + chr2_1:5483543-5483562 Msa0190040:CDS 45.0%
GCTTTACAAGCGATTGACAG+AGG + chr2_1:5483576-5483595 Msa0190040:CDS 45.0%
TTACAAGCGATTGACAGAGG+AGG + chr2_1:5483579-5483598 Msa0190040:CDS 45.0%
GTTCCCGGTAGATTTCTATG+AGG + chr2_1:5483639-5483658 Msa0190040:CDS 45.0%
TTCTATGAGGAAGTCCAGCT+TGG + chr2_1:5483652-5483671 Msa0190040:CDS 45.0%
AAGTGGAAGTAAGACCAAGC+TGG - chr2_1:5483669-5483688 None:intergenic 45.0%
CAATGGCTATGATTGTCTCC+TGG - chr2_1:5483978-5483997 None:intergenic 45.0%
GGTGCTTAGAACATCCACAA+TGG + chr2_1:5484117-5484136 Msa0190040:intron 45.0%
GTACACGTAGGGTCCATTTA+AGG - chr2_1:5484152-5484171 None:intergenic 45.0%
GTGGGATCTGTTAGTTGTCA+AGG + chr2_1:5484270-5484289 Msa0190040:intron 45.0%
GTTAGTTGTCAAGGAGAGAG+AGG + chr2_1:5484279-5484298 Msa0190040:intron 45.0%
TATTAAGGACCCTCCTATGG+AGG - chr2_1:5484351-5484370 None:intergenic 45.0%
TCCATAGGAGGGTCCTTAAT+AGG + chr2_1:5484350-5484369 Msa0190040:intron 45.0%
CCATAGGAGGGTCCTTAATA+GGG + chr2_1:5484351-5484370 Msa0190040:intron 45.0%
CATAGGAGGGTCCTTAATAG+GGG + chr2_1:5484352-5484371 Msa0190040:intron 45.0%
TCCTTAATAGGGGTGGGAAT+AGG + chr2_1:5484362-5484381 Msa0190040:intron 45.0%
AGGCTAGACCAGACTTTGAT+AGG + chr2_1:5484382-5484401 Msa0190040:intron 45.0%
TAATATGAAGTAGGCCAGGC+AGG - chr2_1:5484487-5484506 None:intergenic 45.0%
! GTTTAAAAGCATGACCTGCC+TGG + chr2_1:5484527-5484546 Msa0190040:intron 45.0%
CTGTAAATATGCTTCCAGGC+AGG - chr2_1:5484544-5484563 None:intergenic 45.0%
! CTGCCTGGAAGCATATTTAC+AGG + chr2_1:5484542-5484561 Msa0190040:intron 45.0%
AGGCCTGTAAATATGCTTCC+AGG - chr2_1:5484548-5484567 None:intergenic 45.0%
!! TTTCAAGTTCAGTCCCACAC+AGG + chr2_1:5484791-5484810 Msa0190040:intron 45.0%
CCCATCCAAATCCTCTTTGT+TGG + chr2_1:5484851-5484870 Msa0190040:intron 45.0%
GTGGTGATATAAGCGGTACT+CGG + chr2_1:5485294-5485313 Msa0190040:intron 45.0%
AATCCAAGTTCCAATAGGCC+TGG + chr2_1:5486042-5486061 Msa0190040:CDS 45.0%
AAATCACCTTCCAGGCCTAT+TGG - chr2_1:5486055-5486074 None:intergenic 45.0%
! GCCTGGAAGGTGATTTTCAA+GGG + chr2_1:5486059-5486078 Msa0190040:CDS 45.0%
!!! TTTTGTATCGGTTACTCCCG+TGG + chr2_1:5486141-5486160 Msa0190040:intron 45.0%
TGCCAACGAAACTTAACCAC+GGG - chr2_1:5486160-5486179 None:intergenic 45.0%
CGAAGAAGTTCCAGCAGATA+TGG + chr2_1:5486231-5486250 Msa0190040:CDS 45.0%
! ACGCCTTTTGTCTAACACCA+AGG - chr2_1:5486260-5486279 None:intergenic 45.0%
GAAACTGTCTCAGAGGTTGA+CGG + chr2_1:5486289-5486308 Msa0190040:CDS 45.0%
! CTTGCTGAGGCTTTTCATTG+TGG + chr2_1:5486316-5486335 Msa0190040:CDS 45.0%
CTCAAGAACAGCCGATGATA+TGG - chr2_1:5486347-5486366 None:intergenic 45.0%
! CATATCATCGGCTGTTCTTG+AGG + chr2_1:5486345-5486364 Msa0190040:CDS 45.0%
GGCATGATACACCCAAAGTT+TGG + chr2_1:5486463-5486482 Msa0190040:intron 45.0%
CTTCTACCTAGGGATGTCAA+TGG + chr2_1:5486615-5486634 Msa0190040:intron 45.0%
TGATACCCATTGACATCCCT+AGG - chr2_1:5486624-5486643 None:intergenic 45.0%
AGGGATGTCAATGGGTATCA+TGG + chr2_1:5486624-5486643 Msa0190040:intron 45.0%
GGGATGTCAATGGGTATCAT+GGG + chr2_1:5486625-5486644 Msa0190040:intron 45.0%
GTCAATGGGTATCATGGGTA+AGG + chr2_1:5486630-5486649 Msa0190040:intron 45.0%
CATATTTATCTGACGGGGAG+GGG - chr2_1:5486672-5486691 None:intergenic 45.0%
!! ACAGGTATGGAGGTATCCAT+GGG + chr2_1:5486746-5486765 Msa0190040:intron 45.0%
!!! CCCCACTAAATTGGCTTTTG+AGG + chr2_1:5486779-5486798 Msa0190040:intron 45.0%
CTACTACTACTACTCCGTGT+TGG + chr2_1:5486926-5486945 Msa0190040:intron 45.0%
ATCAAACGAACCTCTCCAGA+AGG + chr2_1:5487000-5487019 Msa0190040:intron 45.0%
GGACAGTTAGCTAGATCAGT+TGG - chr2_1:5487078-5487097 None:intergenic 45.0%
TTATGTATGGCCGTGCCTAA+GGG + chr2_1:5487123-5487142 Msa0190040:intron 45.0%
ACTACAACCGATATGCCCTT+AGG - chr2_1:5487141-5487160 None:intergenic 45.0%
ACGGAGAGTAGTGATGACAA+TGG + chr2_1:5487645-5487664 Msa0190040:intron 45.0%
TTTATCTAACAGGGCAGGGA+CGG - chr2_1:5487699-5487718 None:intergenic 45.0%
CATGGATACCCCAAAACTCT+TGG - chr2_1:5487774-5487793 None:intergenic 45.0%
!!! CAAGAGTTTTGGGGTATCCA+TGG + chr2_1:5487772-5487791 Msa0190040:intron 45.0%
GTGATATCCACGAATACCCA+TGG - chr2_1:5487792-5487811 None:intergenic 45.0%
TGGGTATTCGTGGATATCAC+TGG + chr2_1:5487792-5487811 Msa0190040:intron 45.0%
TGCACACCCACTCAAAAATC+AGG - chr2_1:5488003-5488022 None:intergenic 45.0%
AAGCTCTCGGATGAAGTTGA+AGG + chr2_1:5488156-5488175 Msa0190040:intron 45.0%
AGAAGGCGAAGACATGCAAT+GGG - chr2_1:5488330-5488349 None:intergenic 45.0%
GCAAATTCAAGAGAGGCAGA+AGG - chr2_1:5488347-5488366 None:intergenic 45.0%
GGACCTTAGAATCTGACACA+TGG - chr2_1:5488411-5488430 None:intergenic 45.0%
!! TCAGATTCTAAGGTCCTTCG+CGG + chr2_1:5488415-5488434 Msa0190040:intron 45.0%
GTCTGGAAATAGAGTAGAGC+TGG - chr2_1:5488441-5488460 None:intergenic 45.0%
! AAAGCACTACCCATGAGTAC+AGG - chr2_1:5488943-5488962 None:intergenic 45.0%
!! CGGTTTTGTAAGGATGAGCT+AGG - chr2_1:5489121-5489140 None:intergenic 45.0%
CACTTCTCACCTTACAAAGC+CGG - chr2_1:5489141-5489160 None:intergenic 45.0%
GGTGTATTGGGAAAAACCCA+AGG - chr2_1:5489257-5489276 None:intergenic 45.0%
CACCAAGCACAATTGTGTTG+GGG - chr2_1:5489288-5489307 None:intergenic 45.0%
GCACCAAGCACAATTGTGTT+GGG - chr2_1:5489289-5489308 None:intergenic 45.0%
TGGTAGGTGACCCGATTATA+AGG + chr2_1:5489320-5489339 Msa0190040:intron 45.0%
TAGGTGACCCGATTATAAGG+AGG + chr2_1:5489323-5489342 Msa0190040:intron 45.0%
CCCGATTATAAGGAGGAGTT+AGG + chr2_1:5489330-5489349 Msa0190040:intron 45.0%
!! GGCTTTGTTTGCAAGTTTGG+AGG - chr2_1:5489428-5489447 None:intergenic 45.0%
CTTGCAAACAAAGCCTTAGG+AGG + chr2_1:5489433-5489452 Msa0190040:intron 45.0%
TGCAAACAAAGCCTTAGGAG+GGG + chr2_1:5489435-5489454 Msa0190040:intron 45.0%
TCCTTCACCATAATCTGCGA+TGG + chr2_1:5489603-5489622 Msa0190040:intron 45.0%
ATAGCAGCCATCGCAGATTA+TGG - chr2_1:5489613-5489632 None:intergenic 45.0%
TTGGGAAGTGGTGCGTTAAA+GGG - chr2_1:5489708-5489727 None:intergenic 45.0%
TTTGGGAAGTGGTGCGTTAA+AGG - chr2_1:5489709-5489728 None:intergenic 45.0%
AAGCAAGCATGTTGTTGGGT+AGG + chr2_1:5489856-5489875 Msa0190040:intron 45.0%
TTACTAACTTCACTCGGGCA+TGG - chr2_1:5490061-5490080 None:intergenic 45.0%
GTATGCTCTCGACAAAGCAA+AGG + chr2_1:5490081-5490100 Msa0190040:CDS 45.0%
! GGATTTGGTTGTTTAGGGGA+TGG - chr2_1:5490323-5490342 None:intergenic 45.0%
!!! TGAGAATTTTGGGGTAGAGC+TGG + chr2_1:5490406-5490425 Msa0190040:three_prime_UTR 45.0%
!!! GAGAATTTTGGGGTAGAGCT+GGG + chr2_1:5490407-5490426 Msa0190040:three_prime_UTR 45.0%
!! GGTTGGCTTCGTAAGAACTA+AGG + chr2_1:5490455-5490474 Msa0190040:three_prime_UTR 45.0%
! AGGGTTAGTGCTTCTGCATT+TGG + chr2_1:5490475-5490494 Msa0190040:three_prime_UTR 45.0%
! GGGTTAGTGCTTCTGCATTT+GGG + chr2_1:5490476-5490495 Msa0190040:three_prime_UTR 45.0%
!! CTTCTGCATTTGGGTTTTGC+TGG + chr2_1:5490485-5490504 Msa0190040:three_prime_UTR 45.0%
GTATGGAATAGAGGGCTCAA+TGG + chr2_1:5490537-5490556 Msa0190040:three_prime_UTR 45.0%
AATAGAGGGCTCAATGGTGA+AGG + chr2_1:5490543-5490562 Msa0190040:three_prime_UTR 45.0%
GCTTCCTGCACAATCTTTGA+AGG - chr2_1:5490583-5490602 None:intergenic 45.0%
! CTTTTGTGGCTGTTAAGCAG+AGG + chr2_1:5490660-5490679 Msa0190040:three_prime_UTR 45.0%
TTCATCTTGTCTCCCACTTC+AGG + chr2_1:5490715-5490734 Msa0190040:three_prime_UTR 45.0%
CCTCTTTGGATGATTCGAAG+CGG + chr2_1:5491091-5491110 Msa0190040:three_prime_UTR 45.0%
CTCTTTGGATGATTCGAAGC+GGG + chr2_1:5491092-5491111 Msa0190040:three_prime_UTR 45.0%
TGGGCCTACTAGAACATGTA+AGG + chr2_1:5491127-5491146 Msa0190040:three_prime_UTR 45.0%
TCTGACAAAGCCTTTGCACA+AGG + chr2_1:5491160-5491179 Msa0190040:three_prime_UTR 45.0%
GTAGTCTCAGAGACAAACTC+AGG + chr2_1:5491191-5491210 Msa0190040:three_prime_UTR 45.0%
ATCGGTGGTCACATTTAAGG+CGG + chr2_1:5491513-5491532 Msa0190040:three_prime_UTR 45.0%
ATGCAGGGACTACTGTGAAT+TGG - chr2_1:5491898-5491917 None:intergenic 45.0%
AGTGACACATTCGACAAAGG+TGG - chr2_1:5492234-5492253 None:intergenic 45.0%
TATATGCTCCAACTTGAGGG+GGG - chr2_1:5492381-5492400 None:intergenic 45.0%
!! TGAGAAGGAGTACCGTGTTA+TGG - chr2_1:5492713-5492732 None:intergenic 45.0%
!! TGCAAGGTCAAGTACTGAGA+AGG - chr2_1:5492728-5492747 None:intergenic 45.0%
ACAGCCCATACCAGTATTGT+TGG - chr2_1:5492865-5492884 None:intergenic 45.0%
! ACATTCCATTGGCTATCGCA+TGG + chr2_1:5492944-5492963 Msa0190040:intron 45.0%
AAGGAGTTGTATCTTGACCC+AGG - chr2_1:5493065-5493084 None:intergenic 45.0%
! TAAACCGGCTCATACTCCTA+TGG - chr2_1:5493115-5493134 None:intergenic 45.0%
GGGGATGCTTGATTGTAAAC+CGG - chr2_1:5493130-5493149 None:intergenic 45.0%
TCGATATCTTGGAAGAGACG+GGG - chr2_1:5493149-5493168 None:intergenic 45.0%
CTCGATATCTTGGAAGAGAC+GGG - chr2_1:5493150-5493169 None:intergenic 45.0%
GAACTACTTTGTGATCGTGG+AGG + chr2_1:5493351-5493370 Msa0190040:intron 45.0%
GTAGAGCCAAAAACTCGAAG+TGG + chr2_1:5493622-5493641 Msa0190040:intron 45.0%
CTGCATGTCATCATCAGTCT+TGG - chr2_1:5493701-5493720 None:intergenic 45.0%
CTGAACACACCGCAACAAAA+TGG - chr2_1:5493834-5493853 None:intergenic 45.0%
AGTCGCATGCCCTCTAATTT+AGG - chr2_1:5494086-5494105 None:intergenic 45.0%
! AAATTAGAGGGCATGCGACT+AGG + chr2_1:5494086-5494105 Msa0190040:intron 45.0%
ATCAAATTGAAGGGGCAGTC+AGG + chr2_1:5494471-5494490 Msa0190040:intron 45.0%
AAGGCACAGCTAACTGGTAT+TGG - chr2_1:5494546-5494565 None:intergenic 45.0%
GTGCCTTAGAACCATTAGCA+AGG + chr2_1:5494559-5494578 Msa0190040:intron 45.0%
CACAGCATTACCCTTGCTAA+TGG - chr2_1:5494573-5494592 None:intergenic 45.0%
TCTCACTCTATAGGGGATCA+TGG - chr2_1:5494678-5494697 None:intergenic 45.0%
GATAACTGTGCAGATCTGCA+CGG + chr2_1:5494817-5494836 Msa0190040:intron 45.0%
!! AGATGTGTCGGTTCTTGAGT+TGG - chr2_1:5494951-5494970 None:intergenic 45.0%
GTGAGACCCATAAAACTGGA+AGG + chr2_1:5495002-5495021 Msa0190040:intron 45.0%
!! GGGACACCTTCCAGTTTTAT+GGG - chr2_1:5495011-5495030 None:intergenic 45.0%
! TGGGACACCTTCCAGTTTTA+TGG - chr2_1:5495012-5495031 None:intergenic 45.0%
! CCTCCGTCAGTTTTTGTTCA+AGG - chr2_1:5495041-5495060 None:intergenic 45.0%
CCTTGAACAAAAACTGACGG+AGG + chr2_1:5495038-5495057 Msa0190040:intron 45.0%
!! CTTCCGTTGTTTCGGTTTTG+GGG - chr2_1:5495144-5495163 None:intergenic 45.0%
!! CCTTCCGTTGTTTCGGTTTT+GGG - chr2_1:5495145-5495164 None:intergenic 45.0%
!! ACCTTCCGTTGTTTCGGTTT+TGG - chr2_1:5495146-5495165 None:intergenic 45.0%
! TGAGGTACCTTCCGTTGTTT+CGG - chr2_1:5495152-5495171 None:intergenic 45.0%
AGCCTTTCTTGTGGAAATGC+AGG + chr2_1:5495690-5495709 Msa0190040:intron 45.0%
CGACAGTTAAAAAGGAACGG+AGG + chr2_1:5496295-5496314 Msa0190040:intron 45.0%
GATTCTTGTGCCAAACTTGC+AGG + chr2_1:5496652-5496671 Msa0190040:intron 45.0%
ACTTCACCTATTTGTGCACC+AGG + chr2_1:5496740-5496759 Msa0190040:three_prime_UTR 45.0%
GTAGAACCTGGTGCACAAAT+AGG - chr2_1:5496749-5496768 None:intergenic 45.0%
! TTTTTGCAACCCACTTGGGT+TGG + chr2_1:5496913-5496932 Msa0190040:three_prime_UTR 45.0%
! GTCATACCCTAAAATGGGCT+TGG + chr2_1:5497154-5497173 Msa0190040:three_prime_UTR 45.0%
! TTGGGTCCAAGCCCATTTTA+GGG - chr2_1:5497163-5497182 None:intergenic 45.0%
! ATTGGGTCCAAGCCCATTTT+AGG - chr2_1:5497164-5497183 None:intergenic 45.0%
CAAAACCTTTGGACCTTGAG+AGG - chr2_1:5497250-5497269 None:intergenic 45.0%
! CTCTCAAGGTCCAAAGGTTT+TGG + chr2_1:5497248-5497267 Msa0190040:three_prime_UTR 45.0%
!! TCAAGGTCCAAAGGTTTTGG+AGG + chr2_1:5497251-5497270 Msa0190040:three_prime_UTR 45.0%
GTCGGAATGGTATTCGATGA+TGG + chr2_1:5497325-5497344 Msa0190040:three_prime_UTR 45.0%
GTCATAGTGGTGATTGATGG+TGG + chr2_1:5497401-5497420 Msa0190040:three_prime_UTR 45.0%
!! GTGGTAGTATTGGTGATAGG+TGG + chr2_1:5497420-5497439 Msa0190040:three_prime_UTR 45.0%
!! GTAGTATTGGTGATAGGTGG+TGG + chr2_1:5497423-5497442 Msa0190040:three_prime_UTR 45.0%
TAAGGCGGTAATTGGAGTAG+TGG + chr2_1:5497447-5497466 Msa0190040:three_prime_UTR 45.0%
GTAGTGGTCATGATGGTAGT+CGG + chr2_1:5497463-5497482 Msa0190040:three_prime_UTR 45.0%
GTCAACCACCACTCAAACAA+CGG - chr2_1:5497533-5497552 None:intergenic 45.0%
GTTGACGACGGTAATTGAAG+TGG + chr2_1:5497547-5497566 Msa0190040:three_prime_UTR 45.0%
GTGGTAAGAGATGCGATTGA+TGG + chr2_1:5497579-5497598 Msa0190040:three_prime_UTR 45.0%
!!! AATTATATGAATTTTTTTAA+AGG + chr2_1:5485570-5485589 Msa0190040:intron 5.0%
!!! AAATTAAATGATTTATTTTA+AGG + chr2_1:5485818-5485837 Msa0190040:intron 5.0%
!! AAATAAAAAAATAATGATAT+TGG - chr2_1:5491607-5491626 None:intergenic 5.0%
!!! GATTAATATTTTTTAAAAAT+GGG + chr2_1:5496402-5496421 Msa0190040:intron 5.0%
!!! TTTTAATTTTAATTTTTTGA+AGG + chr2_1:5498051-5498070 Msa0190040:three_prime_UTR 5.0%
AATCCTCGGAGAAGTTACGG+AGG - chr2_1:5483369-5483388 None:intergenic 50.0%
GCGCATCCTCTTTGAATCCT+CGG - chr2_1:5483383-5483402 None:intergenic 50.0%
CAAAGAGGATGCGCAACATC+TGG + chr2_1:5483389-5483408 Msa0190040:intron 50.0%
GATGCGCAACATCTGGATCT+CGG + chr2_1:5483396-5483415 Msa0190040:intron 50.0%
ATGCGCAACATCTGGATCTC+GGG + chr2_1:5483397-5483416 Msa0190040:intron 50.0%
GGGACTCATACAACCTAAGC+TGG + chr2_1:5483417-5483436 Msa0190040:intron 50.0%
! AGCTGGTGTCAAATGAGGTG+AGG + chr2_1:5483434-5483453 Msa0190040:intron 50.0%
TGAGCCGACCTGCATAAAAC+AGG - chr2_1:5483462-5483481 None:intergenic 50.0%
!! GTTTTATGCAGGTCGGCTCA+AGG + chr2_1:5483462-5483481 Msa0190040:intron 50.0%
TATTGAAGGGAACAGGGTGG+CGG + chr2_1:5483751-5483770 Msa0190040:intron 50.0%
CCCTATTAAGGACCCTCCTA+TGG - chr2_1:5484354-5484373 None:intergenic 50.0%
GCCTATTCCCACCCCTATTA+AGG - chr2_1:5484366-5484385 None:intergenic 50.0%
AATTTCCTTAGGCCAGGCTC+AGG - chr2_1:5484408-5484427 None:intergenic 50.0%
TACACAATATGTGCAGGGGC+CGG + chr2_1:5484615-5484634 Msa0190040:intron 50.0%
CAAAGCCCTCTGAACGTCAA+TGG - chr2_1:5484976-5484995 None:intergenic 50.0%
TGCACAATGATGCCCAAGCT+TGG - chr2_1:5486020-5486039 None:intergenic 50.0%
CTTCCAGGCCTATTGGAACT+TGG - chr2_1:5486048-5486067 None:intergenic 50.0%
CAAGTTCCAATAGGCCTGGA+AGG + chr2_1:5486046-5486065 Msa0190040:CDS 50.0%
! GGCCTGGAAGGTGATTTTCA+AGG + chr2_1:5486058-5486077 Msa0190040:CDS 50.0%
GCCCTTGAAAATCACCTTCC+AGG - chr2_1:5486063-5486082 None:intergenic 50.0%
CGTCGATCTCGTGCAGTTAA+AGG + chr2_1:5486084-5486103 Msa0190040:intron 50.0%
CTCCCGTGGTTAAGTTTCGT+TGG + chr2_1:5486155-5486174 Msa0190040:intron 50.0%
TCCAGCAGATATGGAAGCCT+TGG + chr2_1:5486240-5486259 Msa0190040:CDS 50.0%
ACCAAGGCTTCCATATCTGC+TGG - chr2_1:5486244-5486263 None:intergenic 50.0%
CCGTGCACTCTCCAAACTTT+GGG - chr2_1:5486477-5486496 None:intergenic 50.0%
! CCCAAAGTTTGGAGAGTGCA+CGG + chr2_1:5486474-5486493 Msa0190040:intron 50.0%
TCCGTGCACTCTCCAAACTT+TGG - chr2_1:5486478-5486497 None:intergenic 50.0%
TGCAGGTACGAGTACAGACA+CGG - chr2_1:5486699-5486718 None:intergenic 50.0%
TGTCTGTACTCGTACCTGCA+CGG + chr2_1:5486699-5486718 Msa0190040:intron 50.0%
!! CACAGGTATGGAGGTATCCA+TGG + chr2_1:5486745-5486764 Msa0190040:intron 50.0%
GTGGGGTTGTGTTAAACCCA+TGG - chr2_1:5486765-5486784 None:intergenic 50.0%
GTTATGTATGGCCGTGCCTA+AGG + chr2_1:5487122-5487141 Msa0190040:intron 50.0%
AACCGATATGCCCTTAGGCA+CGG - chr2_1:5487136-5487155 None:intergenic 50.0%
!! ATAACTGGTTGGTTTGGGCC+AGG - chr2_1:5487381-5487400 None:intergenic 50.0%
CACTCAAACCCGAACCAAAC+CGG + chr2_1:5487495-5487514 Msa0190040:intron 50.0%
!! TAACTCCTAGGGGTGTTTGC+CGG - chr2_1:5487517-5487536 None:intergenic 50.0%
! AGGGGTATGAGACTTCGTAG+TGG + chr2_1:5487591-5487610 Msa0190040:intron 50.0%
CTAGAGTACAGGACTGACAC+GGG - chr2_1:5487729-5487748 None:intergenic 50.0%
GCTAGAGTACAGGACTGACA+CGG - chr2_1:5487730-5487749 None:intergenic 50.0%
CAGAAGGCGAAGACATGCAA+TGG - chr2_1:5488331-5488350 None:intergenic 50.0%
TACAACACGGCAAAAGGGTC+TGG - chr2_1:5488458-5488477 None:intergenic 50.0%
GTAAAATTCGAAGGGGGGCA+AGG - chr2_1:5488845-5488864 None:intergenic 50.0%
TTCGTAGGGCTACCATAGCA+CGG + chr2_1:5488908-5488927 Msa0190040:CDS 50.0%
ACAATTGTGTTGGGGCGTGA+GGG - chr2_1:5489280-5489299 None:intergenic 50.0%
CGCACCAAGCACAATTGTGT+TGG - chr2_1:5489290-5489309 None:intergenic 50.0%
TTTGCAAGTTTGGAGGGGAG+GGG - chr2_1:5489421-5489440 None:intergenic 50.0%
GTTTGCAAGTTTGGAGGGGA+GGG - chr2_1:5489422-5489441 None:intergenic 50.0%
TGTTTGCAAGTTTGGAGGGG+AGG - chr2_1:5489423-5489442 None:intergenic 50.0%
TTAGGAGGGGAAGTGAGTGA+GGG + chr2_1:5489448-5489467 Msa0190040:intron 50.0%
TATGGCCATCCGTCACAAAC+AGG + chr2_1:5489560-5489579 Msa0190040:intron 50.0%
! TCTTGCCTGTTTGTGACGGA+TGG - chr2_1:5489568-5489587 None:intergenic 50.0%
CAGCTCTTGCCTGTTTGTGA+CGG - chr2_1:5489572-5489591 None:intergenic 50.0%
CACAAACAGGCAAGAGCTGT+TGG + chr2_1:5489573-5489592 Msa0190040:intron 50.0%
GCCATCGCAGATTATGGTGA+AGG - chr2_1:5489607-5489626 None:intergenic 50.0%
TGGGAAGTGGTGCGTTAAAG+GGG - chr2_1:5489707-5489726 None:intergenic 50.0%
CTGTGGTCCCTGTACACAAA+AGG - chr2_1:5490008-5490027 None:intergenic 50.0%
CGAAGTACACCATCCAGTAG+TGG - chr2_1:5490031-5490050 None:intergenic 50.0%
GCTCTCGACAAAGCAAAGGA+CGG + chr2_1:5490085-5490104 Msa0190040:CDS 50.0%
CTCTCGACAAAGCAAAGGAC+GGG + chr2_1:5490086-5490105 Msa0190040:CDS 50.0%
TCTCGACAAAGCAAAGGACG+GGG + chr2_1:5490087-5490106 Msa0190040:CDS 50.0%
!! GGGGTGAAGGTATCTGATTC+AGG + chr2_1:5490106-5490125 Msa0190040:CDS 50.0%
AGGGCTCAATGGTGAAGGAT+TGG + chr2_1:5490548-5490567 Msa0190040:three_prime_UTR 50.0%
AGAGAGAGAGAGAGAGAGTG+AGG - chr2_1:5491033-5491052 None:intergenic 50.0%
CCGCTTCGAATCATCCAAAG+AGG - chr2_1:5491094-5491113 None:intergenic 50.0%
TAGTAGGCCCAATTGCCTCA+AGG - chr2_1:5491118-5491137 None:intergenic 50.0%
! TAAACCACTTGTGGCATCGG+TGG + chr2_1:5491498-5491517 Msa0190040:three_prime_UTR 50.0%
!! GGCATCGGTGGTCACATTTA+AGG + chr2_1:5491510-5491529 Msa0190040:three_prime_UTR 50.0%
! TCGGTGGTCACATTTAAGGC+GGG + chr2_1:5491514-5491533 Msa0190040:three_prime_UTR 50.0%
CTATACAATCCCCCTCTCGA+AGG - chr2_1:5491679-5491698 None:intergenic 50.0%
ATATGCTCCAACTTGAGGGG+GGG - chr2_1:5492380-5492399 None:intergenic 50.0%
! ATGTCGTGGTTCGGATCTTG+AGG - chr2_1:5492928-5492947 None:intergenic 50.0%
TCCGAACCACGACATTCCAT+TGG + chr2_1:5492933-5492952 Msa0190040:intron 50.0%
GCCAATGGAATGTCGTGGTT+CGG - chr2_1:5492937-5492956 None:intergenic 50.0%
CGATAGCCAATGGAATGTCG+TGG - chr2_1:5492942-5492961 None:intergenic 50.0%
ACTCACCATGCGATAGCCAA+TGG - chr2_1:5492952-5492971 None:intergenic 50.0%
AGCTTCACATTGGGGTCCAT+AGG + chr2_1:5493096-5493115 Msa0190040:intron 50.0%
ATCGTGGAGGTCTTTGAGCA+GGG + chr2_1:5493364-5493383 Msa0190040:intron 50.0%
GGTCTTTGAGCAGGGACAAA+TGG + chr2_1:5493372-5493391 Msa0190040:intron 50.0%
!! GGTTCTAAGGCACAGCTAAC+TGG - chr2_1:5494552-5494571 None:intergenic 50.0%
CCCAAAACCGAAACAACGGA+AGG + chr2_1:5495142-5495161 Msa0190040:intron 50.0%
! AAGCTGGTACTGAAGCTCTC+TGG - chr2_1:5495175-5495194 None:intergenic 50.0%
ATTATCGGACGCAAGCCGTA+CGG + chr2_1:5495383-5495402 Msa0190040:intron 50.0%
TGTGGCTGAAGCCTTTCTTG+TGG + chr2_1:5495681-5495700 Msa0190040:intron 50.0%
ACATTCAAGAGGCTCGTGCT+GGG + chr2_1:5496675-5496694 Msa0190040:three_prime_UTR 50.0%
CTTGAAGTGTGCTCCTCTCA+AGG + chr2_1:5497234-5497253 Msa0190040:three_prime_UTR 50.0%
TACCATTCCGACTACTACCC+AGG - chr2_1:5497317-5497336 None:intergenic 50.0%
GTGGTTGGAGGTAGTCATAG+TGG + chr2_1:5497388-5497407 Msa0190040:three_prime_UTR 50.0%
! TTGGTGATAGGTGGTGGCTA+AGG + chr2_1:5497429-5497448 Msa0190040:three_prime_UTR 50.0%
GTGGTGGTCAGATTTGCGAT+CGG + chr2_1:5497485-5497504 Msa0190040:three_prime_UTR 50.0%
GTCAGATTTGCGATCGGATG+TGG + chr2_1:5497491-5497510 Msa0190040:three_prime_UTR 50.0%
ATCGACCGTTGTTTGAGTGG+TGG + chr2_1:5497525-5497544 Msa0190040:three_prime_UTR 50.0%
GTTTGAGTGGTGGTTGACGA+CGG + chr2_1:5497535-5497554 Msa0190040:three_prime_UTR 50.0%
!! TGCGATTGATGGTGTCAGAG+TGG + chr2_1:5497590-5497609 Msa0190040:three_prime_UTR 50.0%
GAGTGGTTGTCGACAACCAA+TGG + chr2_1:5497607-5497626 Msa0190040:three_prime_UTR 50.0%
TGGTTGTCGACAACCAATGG+TGG + chr2_1:5497610-5497629 Msa0190040:three_prime_UTR 50.0%
AACCTCCTAGATGGTCCCTT+GGG + chr2_1:5497784-5497803 Msa0190040:three_prime_UTR 50.0%
TAAACCCCAAGGGACCATCT+AGG - chr2_1:5497792-5497811 None:intergenic 50.0%
AGAACGGACGGTTGATCTGA+CGG - chr2_1:5497957-5497976 None:intergenic 50.0%
CGAGGTGGTCATTCATACCG+CGG + chr2_1:5483296-5483315 Msa0190040:CDS 55.0%
GTTACGGAGGTGGAACTTCG+TGG - chr2_1:5483356-5483375 None:intergenic 55.0%
TCGGCTCAAGGACTTTCCCA+AGG + chr2_1:5483474-5483493 Msa0190040:CDS 55.0%
CGGCTCAAGGACTTTCCCAA+GGG + chr2_1:5483475-5483494 Msa0190040:CDS 55.0%
GACAGAGGAGGACTATCACG+TGG + chr2_1:5483591-5483610 Msa0190040:CDS 55.0%
AGAGGAGGACTATCACGTGG+AGG + chr2_1:5483594-5483613 Msa0190040:CDS 55.0%
GAGGAGGACTATCACGTGGA+GGG + chr2_1:5483595-5483614 Msa0190040:CDS 55.0%
TTGCTGTAACTGCTCCACCC+AGG + chr2_1:5483957-5483976 Msa0190040:intron 55.0%
GGCTATGATTGTCTCCTGGG+TGG - chr2_1:5483974-5483993 None:intergenic 55.0%
AGGAGGGTCCTTAATAGGGG+TGG + chr2_1:5484355-5484374 Msa0190040:intron 55.0%
GGAGGGTCCTTAATAGGGGT+GGG + chr2_1:5484356-5484375 Msa0190040:intron 55.0%
GGCTCAGGCCTATCAAAGTC+TGG - chr2_1:5484393-5484412 None:intergenic 55.0%
GACTTTGATAGGCCTGAGCC+TGG + chr2_1:5484393-5484412 Msa0190040:intron 55.0%
ACACAATATGTGCAGGGGCC+GGG + chr2_1:5484616-5484635 Msa0190040:intron 55.0%
GGTGGCAAGGATTCAAACCC+CGG - chr2_1:5484637-5484656 None:intergenic 55.0%
GGTGAATAAGTGGGGTGGCA+AGG - chr2_1:5484650-5484669 None:intergenic 55.0%
GTGATACAACACGGGTAGCG+CGG + chr2_1:5485237-5485256 Msa0190040:intron 55.0%
! TGGTGTGGGTTGTTGTGTGG+TGG + chr2_1:5485275-5485294 Msa0190040:intron 55.0%
!! GGTTGACGGTGAACTTGCTG+AGG + chr2_1:5486303-5486322 Msa0190040:CDS 55.0%
TTTATCTGACGGGGAGGGGA+CGG - chr2_1:5486668-5486687 None:intergenic 55.0%
GCAGGTACGAGTACAGACAC+GGG - chr2_1:5486698-5486717 None:intergenic 55.0%
GTCTGTACTCGTACCTGCAC+GGG + chr2_1:5486700-5486719 Msa0190040:intron 55.0%
CTGTATTGCGATACCCGTGC+AGG - chr2_1:5486716-5486735 None:intergenic 55.0%
! CTGCACGGGTATCGCAATAC+AGG + chr2_1:5486714-5486733 Msa0190040:intron 55.0%
!! ACATGGTGGTGGTGAAGGGA+GGG - chr2_1:5486881-5486900 None:intergenic 55.0%
TCCCTTCACCACCACCATGT+GGG + chr2_1:5486881-5486900 Msa0190040:intron 55.0%
!! ACCCACATGGTGGTGGTGAA+GGG - chr2_1:5486885-5486904 None:intergenic 55.0%
CACCATGTGGGTGGTCTACA+GGG + chr2_1:5486893-5486912 Msa0190040:intron 55.0%
AACCCTGTAGACCACCCACA+TGG - chr2_1:5486898-5486917 None:intergenic 55.0%
!! GGTGTTTGCCGGTTTGGTTC+GGG - chr2_1:5487506-5487525 None:intergenic 55.0%
!! GGGTGTTTGCCGGTTTGGTT+CGG - chr2_1:5487507-5487526 None:intergenic 55.0%
TCTAGCGAGTCCCGCAATAC+AGG + chr2_1:5487744-5487763 Msa0190040:intron 55.0%
! GGGGTATCCATGGGTATTCG+TGG + chr2_1:5487782-5487801 Msa0190040:intron 55.0%
AATTGTGTTGGGGCGTGAGG+GGG - chr2_1:5489278-5489297 None:intergenic 55.0%
CAATTGTGTTGGGGCGTGAG+GGG - chr2_1:5489279-5489298 None:intergenic 55.0%
CACAATTGTGTTGGGGCGTG+AGG - chr2_1:5489281-5489300 None:intergenic 55.0%
CGCCCCAACACAATTGTGCT+TGG + chr2_1:5489283-5489302 Msa0190040:intron 55.0%
! GAGGGGAAGACTTTGAGGGT+TGG - chr2_1:5489399-5489418 None:intergenic 55.0%
AGGGGAGGGGAAGACTTTGA+GGG - chr2_1:5489403-5489422 None:intergenic 55.0%
CTCACTCACTTCCCCTCCTA+AGG - chr2_1:5489449-5489468 None:intergenic 55.0%
CTTAGGAGGGGAAGTGAGTG+AGG + chr2_1:5489447-5489466 Msa0190040:intron 55.0%
GTGGTGCGTTAAAGGGGTCT+AGG - chr2_1:5489701-5489720 None:intergenic 55.0%
ACACCATCCAGTAGTGGCTG+TGG - chr2_1:5490025-5490044 None:intergenic 55.0%
CAAAGCAAAGGACGGGGTGA+AGG + chr2_1:5490093-5490112 Msa0190040:CDS 55.0%
TGGTTGTTTAGGGGATGGGC+AGG - chr2_1:5490318-5490337 None:intergenic 55.0%
! GGGTTTTGCTGGAATCGTCC+TGG + chr2_1:5490496-5490515 Msa0190040:three_prime_UTR 55.0%
ATCCATCATGCGCGCTCGAT+TGG + chr2_1:5490769-5490788 Msa0190040:three_prime_UTR 55.0%
TCCATCATGCGCGCTCGATT+GGG + chr2_1:5490770-5490789 Msa0190040:three_prime_UTR 55.0%
TGCGCGCTCGATTGGGAAAA+TGG + chr2_1:5490777-5490796 Msa0190040:three_prime_UTR 55.0%
ATGATTCGAAGCGGGCCTTG+AGG + chr2_1:5491100-5491119 Msa0190040:three_prime_UTR 55.0%
AAGCGGGCCTTGAGGCAATT+GGG + chr2_1:5491108-5491127 Msa0190040:three_prime_UTR 55.0%
!! TTACGAGGGTGTCCTTCGAG+AGG + chr2_1:5491664-5491683 Msa0190040:three_prime_UTR 55.0%
!! TACGAGGGTGTCCTTCGAGA+GGG + chr2_1:5491665-5491684 Msa0190040:three_prime_UTR 55.0%
ATCAACACCCCCCCTCAAGT+TGG + chr2_1:5492370-5492389 Msa0190040:intron 55.0%
TCAATTCGAGGCCCCCATTG+AGG + chr2_1:5492438-5492457 Msa0190040:intron 55.0%
! GGGTCCATAGGAGTATGAGC+CGG + chr2_1:5493108-5493127 Msa0190040:intron 55.0%
GATCGTGGAGGTCTTTGAGC+AGG + chr2_1:5493363-5493382 Msa0190040:intron 55.0%
AACTGTGCAGATCTGCACGG+TGG + chr2_1:5494820-5494839 Msa0190040:intron 55.0%
CAACAATGGGTCACCGCTTG+CGG + chr2_1:5495109-5495128 Msa0190040:intron 55.0%
! GGTACTGAAGCTCTCTGGTG+AGG - chr2_1:5495170-5495189 None:intergenic 55.0%
TTATCGGACGCAAGCCGTAC+GGG + chr2_1:5495384-5495403 Msa0190040:intron 55.0%
GACATTCAAGAGGCTCGTGC+TGG + chr2_1:5496674-5496693 Msa0190040:three_prime_UTR 55.0%
GTGCTCCTCTCAAGGTCCAA+AGG + chr2_1:5497242-5497261 Msa0190040:three_prime_UTR 55.0%
!!! GTCCAAAGGTTTTGGAGGCC+CGG + chr2_1:5497256-5497275 Msa0190040:three_prime_UTR 55.0%
! GTGATAGGTGGTGGCTAAGG+CGG + chr2_1:5497432-5497451 Msa0190040:three_prime_UTR 55.0%
GTGGTGGCTAAGGCGGTAAT+TGG + chr2_1:5497439-5497458 Msa0190040:three_prime_UTR 55.0%
GTGGTCATGATGGTAGTCGG+TGG + chr2_1:5497466-5497485 Msa0190040:three_prime_UTR 55.0%
GTCATGATGGTAGTCGGTGG+TGG + chr2_1:5497469-5497488 Msa0190040:three_prime_UTR 55.0%
GCGATCGACCGTTGTTTGAG+TGG + chr2_1:5497522-5497541 Msa0190040:three_prime_UTR 55.0%
CAACCTCCTAGATGGTCCCT+TGG + chr2_1:5497783-5497802 Msa0190040:three_prime_UTR 55.0%
ACCTCCTAGATGGTCCCTTG+GGG + chr2_1:5497785-5497804 Msa0190040:three_prime_UTR 55.0%
ATGCAGTCAGTGGGTGCAGT+CGG - chr2_1:5498001-5498020 None:intergenic 55.0%
ACGGAGGTGGAACTTCGTGG+CGG - chr2_1:5483353-5483372 None:intergenic 60.0%
CCTCGGAGAAGTTACGGAGG+TGG - chr2_1:5483366-5483385 None:intergenic 60.0%
CCACCTCCGTAACTTCTCCG+AGG + chr2_1:5483363-5483382 Msa0190040:intron 60.0%
!! GGAACAGGGTGGCGGCTTTT+AGG + chr2_1:5483759-5483778 Msa0190040:intron 60.0%
ATAGGCCTGAGCCTGGCCTA+AGG + chr2_1:5484400-5484419 Msa0190040:intron 60.0%
CACAATATGTGCAGGGGCCG+GGG + chr2_1:5484617-5484636 Msa0190040:intron 60.0%
TAGCGCGGTTGTGCCATGCA+GGG + chr2_1:5485252-5485271 Msa0190040:intron 60.0%
TTGTGCCATGCAGGGTGGTG+TGG + chr2_1:5485260-5485279 Msa0190040:intron 60.0%
TGTGCCATGCAGGGTGGTGT+GGG + chr2_1:5485261-5485280 Msa0190040:intron 60.0%
ACAACCCACACCACCCTGCA+TGG - chr2_1:5485268-5485287 None:intergenic 60.0%
! GGGTGGTGTGGGTTGTTGTG+TGG + chr2_1:5485272-5485291 Msa0190040:intron 60.0%
AGGGAGGGCCCCGATTGATA+GGG - chr2_1:5486866-5486885 None:intergenic 60.0%
AAGGGAGGGCCCCGATTGAT+AGG - chr2_1:5486867-5486886 None:intergenic 60.0%
!! CACATGGTGGTGGTGAAGGG+AGG - chr2_1:5486882-5486901 None:intergenic 60.0%
CTCCCTTCACCACCACCATG+TGG + chr2_1:5486880-5486899 Msa0190040:intron 60.0%
!! CACCCACATGGTGGTGGTGA+AGG - chr2_1:5486886-5486905 None:intergenic 60.0%
CTTCACCACCACCATGTGGG+TGG + chr2_1:5486884-5486903 Msa0190040:intron 60.0%
GTAGACCACCCACATGGTGG+TGG - chr2_1:5486892-5486911 None:intergenic 60.0%
CCTGTAGACCACCCACATGG+TGG - chr2_1:5486895-5486914 None:intergenic 60.0%
CCACCATGTGGGTGGTCTAC+AGG + chr2_1:5486892-5486911 Msa0190040:intron 60.0%
! GGCCGTGCCTAAGGGCATAT+CGG + chr2_1:5487131-5487150 Msa0190040:intron 60.0%
!! CCTAGGGGTGTTTGCCGGTT+TGG - chr2_1:5487512-5487531 None:intergenic 60.0%
CCAAACCGGCAAACACCCCT+AGG + chr2_1:5487509-5487528 Msa0190040:intron 60.0%
TGCGGGACTCGCTAGAGTAC+AGG - chr2_1:5487740-5487759 None:intergenic 60.0%
TAGAGTAGAGCTGGCCGCGA+AGG - chr2_1:5488432-5488451 None:intergenic 60.0%
GAGGGGAGGGGAAGACTTTG+AGG - chr2_1:5489404-5489423 None:intergenic 60.0%
AAGTTTGGAGGGGAGGGGAG+GGG - chr2_1:5489416-5489435 None:intergenic 60.0%
CAAGTTTGGAGGGGAGGGGA+GGG - chr2_1:5489417-5489436 None:intergenic 60.0%
ACAGGGACCACAGCCACTAC+TGG + chr2_1:5490015-5490034 Msa0190040:intron 60.0%
GGACCACAGCCACTACTGGA+TGG + chr2_1:5490019-5490038 Msa0190040:CDS 60.0%
TCCCAATCGAGCGCGCATGA+TGG - chr2_1:5490774-5490793 None:intergenic 60.0%
GAAGCGGGCCTTGAGGCAAT+TGG + chr2_1:5491107-5491126 Msa0190040:three_prime_UTR 60.0%
GTGACCACCGATGCCACAAG+TGG - chr2_1:5491505-5491524 None:intergenic 60.0%
!! ACGAGGGTGTCCTTCGAGAG+GGG + chr2_1:5491666-5491685 Msa0190040:three_prime_UTR 60.0%
AAACTGACGGAGGGGACGCA+TGG + chr2_1:5495048-5495067 Msa0190040:intron 60.0%
!! GACGCATGGCGGTAATGGAC+TGG + chr2_1:5495062-5495081 Msa0190040:intron 60.0%
ACCACCACGCCAACCCAAGT+GGG - chr2_1:5496925-5496944 None:intergenic 60.0%
TACCACCACGCCAACCCAAG+TGG - chr2_1:5496926-5496945 None:intergenic 60.0%
AGCCGGGCCTCCAAAACCTT+TGG - chr2_1:5497261-5497280 None:intergenic 60.0%
!!! AAGGTTTTGGAGGCCCGGCT+TGG + chr2_1:5497261-5497280 Msa0190040:three_prime_UTR 60.0%
GCAAGCAGCTCAACCAAGCC+GGG - chr2_1:5497277-5497296 None:intergenic 60.0%
CGCAAGCAGCTCAACCAAGC+CGG - chr2_1:5497278-5497297 None:intergenic 60.0%
TTCCGACTACTACCCAGGCC+CGG - chr2_1:5497312-5497331 None:intergenic 60.0%
GGCCTGGGTAGTAGTCGGAA+TGG + chr2_1:5497312-5497331 Msa0190040:three_prime_UTR 60.0%
ACCCCAAGGGACCATCTAGG+AGG - chr2_1:5497789-5497808 None:intergenic 60.0%
GTGGAACTTCGTGGCGGTGG+AGG - chr2_1:5483347-5483366 None:intergenic 65.0%
GAGGTGGAACTTCGTGGCGG+TGG - chr2_1:5483350-5483369 None:intergenic 65.0%
GTAGCGCGGTTGTGCCATGC+AGG + chr2_1:5485251-5485270 Msa0190040:intron 65.0%
! GGGGCGTGAGGGGGTGTATT+GGG - chr2_1:5489269-5489288 None:intergenic 65.0%
! TGGGGCGTGAGGGGGTGTAT+TGG - chr2_1:5489270-5489289 None:intergenic 65.0%
GCAAGTTTGGAGGGGAGGGG+AGG - chr2_1:5489418-5489437 None:intergenic 65.0%
!! CGAGGGTGTCCTTCGAGAGG+GGG + chr2_1:5491667-5491686 Msa0190040:three_prime_UTR 65.0%
GAGGGGACGCATGGCGGTAA+TGG + chr2_1:5495057-5495076 Msa0190040:intron 65.0%
CAATGGGTCACCGCTTGCGG+CGG + chr2_1:5495112-5495131 Msa0190040:intron 65.0%
!! GCAACCCACTTGGGTTGGCG+TGG + chr2_1:5496918-5496937 Msa0190040:three_prime_UTR 65.0%
!! ACCCACTTGGGTTGGCGTGG+TGG + chr2_1:5496921-5496940 Msa0190040:three_prime_UTR 65.0%
TACTACCCAGGCCCGGCCTT+GGG - chr2_1:5497305-5497324 None:intergenic 65.0%
CGCGGTTGTGCCATGCAGGG+TGG + chr2_1:5485255-5485274 Msa0190040:intron 70.0%
CTGACGGAGGGGACGCATGG+CGG + chr2_1:5495051-5495070 Msa0190040:intron 70.0%
GGGGTTTCAGCCGCCGCAAG+CGG - chr2_1:5495125-5495144 None:intergenic 70.0%
GAGCTGCTTGCGCACCCCCA+AGG + chr2_1:5497286-5497305 Msa0190040:three_prime_UTR 70.0%
TGCTTGCGCACCCCCAAGGC+CGG + chr2_1:5497290-5497309 Msa0190040:three_prime_UTR 70.0%
ACTACCCAGGCCCGGCCTTG+GGG - chr2_1:5497304-5497323 None:intergenic 70.0%
CTACTACCCAGGCCCGGCCT+TGG - chr2_1:5497306-5497325 None:intergenic 70.0%
GGCCGGGCCTGGGTAGTAGT+CGG + chr2_1:5497307-5497326 Msa0190040:three_prime_UTR 70.0%
GCTTGCGCACCCCCAAGGCC+GGG + chr2_1:5497291-5497310 Msa0190040:three_prime_UTR 75.0%
CTACCCAGGCCCGGCCTTGG+GGG - chr2_1:5497303-5497322 None:intergenic 75.0%
! GCACCCCCAAGGCCGGGCCT+GGG + chr2_1:5497297-5497316 Msa0190040:three_prime_UTR 80.0%
! CGCACCCCCAAGGCCGGGCC+TGG + chr2_1:5497296-5497315 Msa0190040:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 5483283 5498213 5483283 ID=Msa0190040;Name=Msa0190040
chr2_1 mRNA 5483283 5498213 5483283 ID=Msa0190040-mRNA-1;Parent=Msa0190040;Name=Msa0190040-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.77|0.7|1|0.44|0.3|10|3068|323
chr2_1 exon 5483283 5483370 5483283 ID=Msa0190040-mRNA-1:exon:2468;Parent=Msa0190040-mRNA-1
chr2_1 exon 5483473 5483705 5483473 ID=Msa0190040-mRNA-1:exon:2469;Parent=Msa0190040-mRNA-1
chr2_1 exon 5484936 5485157 5484936 ID=Msa0190040-mRNA-1:exon:2470;Parent=Msa0190040-mRNA-1
chr2_1 exon 5486010 5486098 5486010 ID=Msa0190040-mRNA-1:exon:2471;Parent=Msa0190040-mRNA-1
chr2_1 exon 5486216 5486366 5486216 ID=Msa0190040-mRNA-1:exon:2472;Parent=Msa0190040-mRNA-1
chr2_1 exon 5488901 5488969 5488901 ID=Msa0190040-mRNA-1:exon:2473;Parent=Msa0190040-mRNA-1
chr2_1 exon 5490019 5491569 5490019 ID=Msa0190040-mRNA-1:exon:2474;Parent=Msa0190040-mRNA-1
chr2_1 exon 5491661 5491727 5491661 ID=Msa0190040-mRNA-1:exon:2475;Parent=Msa0190040-mRNA-1
chr2_1 exon 5495712 5495741 5495712 ID=Msa0190040-mRNA-1:exon:2476;Parent=Msa0190040-mRNA-1
chr2_1 exon 5496674 5498213 5496674 ID=Msa0190040-mRNA-1:exon:2477;Parent=Msa0190040-mRNA-1
chr2_1 CDS 5483283 5483370 5483283 ID=Msa0190040-mRNA-1:cds;Parent=Msa0190040-mRNA-1
chr2_1 CDS 5483473 5483705 5483473 ID=Msa0190040-mRNA-1:cds;Parent=Msa0190040-mRNA-1
chr2_1 CDS 5484936 5485157 5484936 ID=Msa0190040-mRNA-1:cds;Parent=Msa0190040-mRNA-1
chr2_1 CDS 5486010 5486098 5486010 ID=Msa0190040-mRNA-1:cds;Parent=Msa0190040-mRNA-1
chr2_1 CDS 5486216 5486366 5486216 ID=Msa0190040-mRNA-1:cds;Parent=Msa0190040-mRNA-1
chr2_1 CDS 5488901 5488969 5488901 ID=Msa0190040-mRNA-1:cds;Parent=Msa0190040-mRNA-1
chr2_1 CDS 5490019 5490138 5490019 ID=Msa0190040-mRNA-1:cds;Parent=Msa0190040-mRNA-1
chr2_1 three_prime_UTR 5490139 5491569 5490139 ID=Msa0190040-mRNA-1:three_prime_utr;Parent=Msa0190040-mRNA-1
chr2_1 three_prime_UTR 5491661 5491727 5491661 ID=Msa0190040-mRNA-1:three_prime_utr;Parent=Msa0190040-mRNA-1
chr2_1 three_prime_UTR 5495712 5495741 5495712 ID=Msa0190040-mRNA-1:three_prime_utr;Parent=Msa0190040-mRNA-1
chr2_1 three_prime_UTR 5496674 5498213 5496674 ID=Msa0190040-mRNA-1:three_prime_utr;Parent=Msa0190040-mRNA-1
Gene Sequence

>Msa0190040

ATGGCTCGTTTCTCGAGGTGGTCATTCATACCGCGGCTATTGTACCACAATACAGTACGTTCCTCCACCGCCACGAAGTTCCACCTCCGTCGGCTCAAGGACTTTCCCAAGGGATTGATTGAGTTTCACGACGTATTGACAGAGTTTTCCGAGCAATTCAGAAAGTTTTACGGAGAGGAGGAAGCGACAGAGCTTTACAAGCGATTGACAGAGGAGGACTATCACGTGGAGGGATCGAAACAATTTTGCGGATTGTTCCCGGTAGATTTCTATGAGGAAGTCCAGCTTGGTCTTACTTCCACTTTTTGGAAAGACTGCAAGATTAACATAATTGACACATTCAAACATGTTGATTTCACCATTGACGTTCAGAGGGCTTTGCATTTTTTTGATGGTGCCATTCTTGTTCTTTCAAGTGTCAGTGGGGTGCATATGAAATCAACAGATGTTGATCAACATATGAAAAGTTATGAAATTCCAAGACTTGTATTTATCGATAAACTTGATAAGAAAGGAGCAAATCCGTGGGTAGTTTTAAATCAGGCAAGATCCAAGCTTGGGCATCATTGTGCAACAATCCAAGTTCCAATAGGCCTGGAAGGTGATTTTCAAGGGCTCGTCGATCTCGTGCATGATAATGTTGTTGCCGAAGAAGTTCCAGCAGATATGGAAGCCTTGGTGTTAGACAAAAGGCGTGAACTCATAGAAACTGTCTCAGAGGTTGACGGTGAACTTGCTGAGGCTTTTCATTGTGGCAAAACCATATCATCGGCTGTTCTTGAGGAAGCAGTTCGTAGGGCTACCATAGCACGGAAATTTATACCTGTACTCATGGGTAGTGCTTTCAAAAAGGGACCACAGCCACTACTGGATGGTGTACTTCGATATTTGCCATGCCCGAGTGAAGTTAGTAAGTATGCTCTCGACAAAGCAAAGGACGGGGTGAAGGTATCTGATTCAGGCAAACTTTAA
Protein sequence

>Msa0190040

MARFSRWSFIPRLLYHNTVRSSTATKFHLRRLKDFPKGLIEFHDVLTEFSEQFRKFYGEEEATELYKRLTEEDYHVEGSKQFCGLFPVDFYEEVQLGLTSTFWKDCKINIIDTFKHVDFTIDVQRALHFFDGAILVLSSVSGVHMKSTDVDQHMKSYEIPRLVFIDKLDKKGANPWVVLNQARSKLGHHCATIQVPIGLEGDFQGLVDLVHDNVVAEEVPADMEALVLDKRRELIETVSEVDGELAEAFHCGKTISSAVLEEAVRRATIARKFIPVLMGSAFKKGPQPLLDGVLRYLPCPSEVSKYALDKAKDGVKVSDSGKL*