AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0191540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0191540 MtrunA17_Chr2g0281281 97.205 322 9 0 4 325 3 324 0.0 637
Msa0191540 MtrunA17_Chr2g0281301 93.168 322 22 0 4 325 16 337 0.0 608
Msa0191540 MtrunA17_Chr4g0013331 32.416 327 215 4 1 325 51 373 8.98e-41 146
Msa0191540 MtrunA17_Chr3g0128511 30.744 309 206 3 20 325 33 336 9.05e-27 108
Msa0191540 MtrunA17_Chr8g0365421 29.787 329 183 13 11 324 85 380 8.33e-26 106
Msa0191540 MtrunA17_Chr4g0045041 31.674 221 139 6 27 240 315 530 1.17e-22 98.6
Msa0191540 MtrunA17_Chr4g0014541 27.928 333 200 12 11 324 16 327 3.29e-22 95.5
Msa0191540 MtrunA17_Chr4g0045061 27.726 321 198 10 27 326 315 622 8.93e-22 95.9
Msa0191540 MtrunA17_Chr4g0014971 28.529 333 199 12 11 324 16 328 9.96e-22 94.0
Msa0191540 MtrunA17_Chr4g0015051 27.692 325 212 10 11 324 16 328 3.60e-21 92.4
Msa0191540 MtrunA17_Chr4g0015091 28.923 325 207 10 11 324 16 327 3.67e-21 92.4
Msa0191540 MtrunA17_Chr4g0014691 28.655 342 186 15 11 324 16 327 6.08e-21 91.7
Msa0191540 MtrunA17_Chr4g0014951 27.300 337 198 12 11 324 16 328 1.07e-19 88.2
Msa0191540 MtrunA17_Chr4g0014931 26.829 328 211 10 11 324 16 328 1.48e-19 87.8
Msa0191540 MtrunA17_Chr7g0235021 25.076 327 217 8 11 324 16 327 1.48e-18 85.1
Msa0191540 MtrunA17_Chr6g0453201 28.788 330 179 12 14 324 24 316 1.64e-18 84.7
Msa0191540 MtrunA17_Chr2g0316731 26.453 344 217 9 4 324 28 358 8.58e-18 83.2
Msa0191540 MtrunA17_Chr8g0351481 32.174 230 135 6 1 218 3 223 9.36e-18 82.8
Msa0191540 MtrunA17_Chr8g0351271 32.174 230 135 6 1 218 3 223 1.54e-17 82.0
Msa0191540 MtrunA17_Chr7g0228011 28.882 322 168 12 24 324 32 313 8.65e-17 79.7
Msa0191540 MtrunA17_Chr6g0465501 26.415 318 181 10 24 324 43 324 1.98e-15 75.9
Msa0191540 MtrunA17_Chr6g0466321 26.415 318 181 10 24 324 43 324 2.32e-15 75.9
Msa0191540 MtrunA17_Chr6g0453191 30.579 242 137 9 14 238 24 251 2.49e-13 69.7
Msa0191540 MtrunA17_Chr8g0385221 28.796 191 131 5 93 279 196 385 2.10e-11 64.3
Msa0191540 MtrunA17_Chr2g0322531 27.126 247 170 8 89 326 102 347 7.71e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0191540 AT4G21580.1 73.832 321 84 0 4 324 3 323 7.30e-174 485
Msa0191540 AT4G21580.3 72.274 321 83 1 4 324 3 317 1.73e-167 469
Msa0191540 AT4G21580.2 72.414 290 80 0 35 324 1 290 1.67e-153 432
Msa0191540 AT5G61510.1 31.761 318 209 4 11 325 93 405 4.40e-38 140
Msa0191540 AT5G61510.2 30.892 314 209 4 15 325 40 348 3.61e-35 131
Msa0191540 AT1G23740.1 30.699 329 180 13 11 324 87 382 4.99e-26 107
Msa0191540 AT3G56460.1 27.545 334 217 7 8 326 15 338 1.23e-24 102
Msa0191540 AT1G49670.1 31.336 217 137 6 29 240 317 526 2.15e-21 95.5
Msa0191540 AT4G13010.1 28.528 326 207 9 11 324 16 327 1.40e-20 90.9
Msa0191540 AT1G49670.2 29.114 237 139 6 29 240 317 549 1.35e-19 90.1
Msa0191540 AT3G15090.1 27.874 348 207 13 4 324 34 364 7.17e-19 86.7
Msa0191540 AT5G63620.1 25.373 335 182 12 6 279 60 387 8.76e-13 68.9
Msa0191540 AT5G63620.2 25.075 335 183 12 6 279 60 387 1.74e-12 68.2

Find 197 sgRNAs with CRISPR-Local

Find 822 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAAACCACAAATTATTTA+AGG 0.138731 2_1:+7143954 None:intergenic
AGGAAATGAAAGAATGAAAA+TGG 0.189235 2_1:-7143814 Msa0191540:three_prime_UTR
AACGTTTCCAAGTGGAAAAT+TGG 0.220666 2_1:-7156812 Msa0191540:five_prime_UTR
GTAGATCTACGTGCTTTATT+TGG 0.236190 2_1:-7145213 Msa0191540:CDS
GTGGATCTACGTGCTTTATT+TGG 0.241490 2_1:-7154882 Msa0191540:five_prime_UTR
ATGAGTACTTCATTGTCTTT+AGG 0.244727 2_1:+7146883 None:intergenic
ACCTTTCCTTCTGCAATTGC+AGG 0.276088 2_1:+7144164 None:intergenic
TCTTCTGCTTTGGTTTATCT+TGG 0.277549 2_1:-7153596 Msa0191540:five_prime_UTR
TTAACTTCTTTCTTCTGCTT+TGG 0.284146 2_1:-7153606 Msa0191540:five_prime_UTR
AATCATACAACTTACCAATA+AGG 0.288330 2_1:+7146001 None:intergenic
TATGACAAGCCGGCTATCTA+AGG 0.293441 2_1:-7146030 Msa0191540:CDS
TATGACAAGCCGGCTATCTA+AGG 0.300012 2_1:-7155709 Msa0191540:five_prime_UTR
TTTATTAATTCTCAGATTCA+TGG 0.307719 2_1:-7155484 Msa0191540:intron
ACCTTACCTTCTGCAATTGC+AGG 0.310584 2_1:+7153888 None:intergenic
TACGCGACACAACACACTTT+TGG 0.311331 2_1:-7153737 Msa0191540:five_prime_UTR
TCTTGGAGTTGAAGAACTTC+AGG 0.328052 2_1:+7157001 None:intergenic
GAACGGTATCGGCACTGTTA+AGG 0.335381 2_1:+7146842 None:intergenic
TTCATCAATTCTCAGGTTCA+TGG 0.344560 2_1:-7145808 Msa0191540:intron
ACGTTTCCAAGTGGAAAATT+GGG 0.345313 2_1:-7156811 Msa0191540:five_prime_UTR
TGATGTTATTCTTGATTGTA+TGG 0.350274 2_1:-7145325 Msa0191540:CDS
TGATGTTATTCTTGATTGTA+TGG 0.350274 2_1:-7154994 Msa0191540:five_prime_UTR
TCTTGAAGTTGTAGAACTTC+AGG 0.359966 2_1:+7146922 None:intergenic
TACACAATTAATAACACATT+TGG 0.360473 2_1:+7153646 None:intergenic
TATCCAGGACTTGAATGTTC+TGG 0.367607 2_1:-7156857 Msa0191540:five_prime_UTR
GAAGGGTATCAGCTCTGTTA+AGG 0.372125 2_1:+7156921 None:intergenic
ACATGCAACCTCAGGAAAAC+TGG 0.374246 2_1:+7155752 None:intergenic
AACGGTATCGGCACTGTTAA+GGG 0.374677 2_1:+7146843 None:intergenic
TATCCAGGTCTTGAATGTTC+TGG 0.375437 2_1:-7146778 Msa0191540:CDS
TGCGGAGGCTCACCGGCTTA+TGG 0.376154 2_1:-7144102 Msa0191540:CDS
TGCGGAGGCTCACCGGCTTA+TGG 0.376154 2_1:-7153826 Msa0191540:five_prime_UTR
TGCTGAGGGACAAGTTCTTC+CGG 0.378801 2_1:-7155805 Msa0191540:five_prime_UTR
ATCAAGATTTCTTTGATAGT+AGG 0.380590 2_1:+7145296 None:intergenic
TACTTGAAACTTGAATGTTT+TGG 0.382292 2_1:-7143853 Msa0191540:three_prime_UTR
AACGTTTCCAACTGGAAAAT+CGG 0.386141 2_1:-7146733 Msa0191540:CDS
TCCTGAGGGACAAGTTCTTC+CGG 0.391442 2_1:-7146126 Msa0191540:CDS
CTTCATCGTCTTTGATTTGA+GGG 0.391499 2_1:+7156969 None:intergenic
TTTGAGGGTCTTCAACCTCT+TGG 0.395986 2_1:+7156984 None:intergenic
CAAGTTCTTCCGGTTCCACC+TGG 0.396015 2_1:-7155795 Msa0191540:five_prime_UTR
TTCTAACCTTAAATAATTTG+TGG 0.399049 2_1:-7143960 Msa0191540:three_prime_UTR
ACTTCATTGTCTTTAGGTTG+AGG 0.404599 2_1:+7146889 None:intergenic
ACTTCATCGTCTTTGATTTG+AGG 0.409397 2_1:+7156968 None:intergenic
TTGACCTCAGTGTTGAATAA+AGG 0.410529 2_1:-7153687 Msa0191540:five_prime_UTR
AGAGAAATCCCGGGTGGAAC+CGG 0.415538 2_1:+7146107 None:intergenic
AGCAAGATTTCTTTGATAGT+AGG 0.419299 2_1:+7154965 None:intergenic
CAGGTATGTGCTCTTCTAGC+TGG 0.420815 2_1:-7146176 Msa0191540:CDS
CAGGTATGTGCTCTTCTAGC+TGG 0.420815 2_1:-7155855 Msa0191540:five_prime_UTR
CAAGTGGAAAATTGGGGATC+AGG 0.422179 2_1:-7156804 Msa0191540:intron
CTTTCACTACTTGAATGCTT+TGG 0.431568 2_1:-7153561 Msa0191540:five_prime_UTR
AGAGAAATCCCAGGTGGAAC+CGG 0.432518 2_1:+7155786 None:intergenic
TTGGTATAAACGTTTCCAAC+TGG 0.432549 2_1:-7146741 Msa0191540:CDS
TGTGTTATTAATTCTGTACT+AGG 0.441208 2_1:-7143919 Msa0191540:three_prime_UTR
CTTCATTGTCTTTAGGTTGA+GGG 0.442897 2_1:+7146890 None:intergenic
CTGAAGTAGAGAAGAATGTT+TGG 0.443029 2_1:-7144187 Msa0191540:CDS
GCCTTTCCTTTGAACGGTAT+CGG 0.446179 2_1:+7146831 None:intergenic
GGAAATGAAAGAATGAAAAT+GGG 0.450245 2_1:-7143813 Msa0191540:three_prime_UTR
GGGCTTGCACCTTGAGGGAT+AGG 0.452215 2_1:+7146802 None:intergenic
GCCTGCAATTGCAGAAGGTA+AGG 0.466263 2_1:-7153889 Msa0191540:five_prime_UTR
CAACTGGAAAATCGGAGATC+AGG 0.466986 2_1:-7146725 Msa0191540:intron
CTGAAGTGGAGAAGAATGTT+TGG 0.467969 2_1:-7153911 Msa0191540:five_prime_UTR
ATGGAAAGCAGTCAGCATAT+TGG 0.471076 2_1:-7144083 Msa0191540:CDS
ATGGAAAGCAGTCAGCATAT+TGG 0.471076 2_1:-7153807 Msa0191540:five_prime_UTR
TTACAAAACAGAGGACTTTG+TGG 0.473910 2_1:-7145521 Msa0191540:CDS
AAGGGTATCAGCTCTGTTAA+GGG 0.477227 2_1:+7156922 None:intergenic
AGAACATTCAAGACCTGGAT+AGG 0.477853 2_1:+7146780 None:intergenic
TGCATCCTTCAGAGAAATCC+CGG 0.479401 2_1:+7146097 None:intergenic
CTGAAGCTGCGGAGGCTCAC+CGG 0.480756 2_1:-7144109 Msa0191540:CDS
CTGAAGCTGCGGAGGCTCAC+CGG 0.480756 2_1:-7153833 Msa0191540:five_prime_UTR
AGGTTTCTCCCTTAGATAGC+CGG 0.480837 2_1:+7155700 None:intergenic
CAAGTTCTTCCGGTTCCACC+CGG 0.482083 2_1:-7146116 Msa0191540:CDS
GCAAGGGTAAAGGAAGAAAC+TGG 0.482737 2_1:-7145499 Msa0191540:CDS
CATGGAGGTTCAAGTGGAAT+CGG 0.482880 2_1:-7155466 Msa0191540:five_prime_UTR
ATCAGCTCTGTTAAGGGCAG+TGG 0.483074 2_1:+7156928 None:intergenic
GGACTTTGTGGCAAGGGTAA+AGG 0.486871 2_1:-7145509 Msa0191540:CDS
AGCCTCCGCAGCTTCAGAAA+GGG 0.487747 2_1:+7153839 None:intergenic
GATAGGGGCTTGCACCTTGA+GGG 0.487874 2_1:+7146797 None:intergenic
TCAAGAGTATTTGTTACTGC+AGG 0.488629 2_1:-7145733 Msa0191540:intron
TCAAGAGTATTTGTTACTGC+AGG 0.488629 2_1:-7155409 Msa0191540:intron
GCAAGGGTAAAGGAAGAAAC+TGG 0.488723 2_1:-7155168 Msa0191540:five_prime_UTR
GATAGGGGCTAGCACCTTGA+GGG 0.489307 2_1:+7156876 None:intergenic
CCCTCTTTCTGAAGCTGCGG+AGG 0.494418 2_1:-7144117 Msa0191540:CDS
GGATAGGGGCTAGCACCTTG+AGG 0.495024 2_1:+7156875 None:intergenic
CATGGAGGTTCAAGTGGAAT+CGG 0.496039 2_1:-7145790 Msa0191540:CDS
ATCGGCACTGTTAAGGGCAG+TGG 0.498747 2_1:+7146849 None:intergenic
TCCACCTGGGATTTCTCTGA+AGG 0.503186 2_1:-7155781 Msa0191540:five_prime_UTR
GAGCCTCCGCAGCTTCAGAA+AGG 0.504076 2_1:+7153838 None:intergenic
GAACATTCAAGTCCTGGATA+GGG 0.505561 2_1:+7156860 None:intergenic
AGAACATTCAAGTCCTGGAT+AGG 0.510975 2_1:+7156859 None:intergenic
ATTCCAGAACATTCAAGTCC+TGG 0.512015 2_1:+7156854 None:intergenic
TAACAAATACTCTTGATCCT+AGG 0.513854 2_1:+7155416 None:intergenic
GTAAAAGCCTTTCCTTTGAA+CGG 0.516093 2_1:+7146825 None:intergenic
ATCTAAGGGAGAAACCTTGT+TGG 0.517870 2_1:-7155694 Msa0191540:intron
TCCACCCGGGATTTCTCTGA+AGG 0.519437 2_1:-7146102 Msa0191540:CDS
GCCTGCAATTGCAGAAGGAA+AGG 0.519570 2_1:-7144165 Msa0191540:CDS
GGACTTTGTAGCAAGGGTAA+AGG 0.520598 2_1:-7155178 Msa0191540:five_prime_UTR
GAACATTCAAGACCTGGATA+GGG 0.521615 2_1:+7146781 None:intergenic
GGGAATGATTTGTAAACCAC+AGG 0.522474 2_1:+7144137 None:intergenic
GGGAAAGATTTGTAGACCAC+AGG 0.522474 2_1:+7153861 None:intergenic
ATGACAAGCCGGCTATCTAA+GGG 0.522904 2_1:-7146029 Msa0191540:CDS
CACTGTTAAGGGCAGTGGCA+TGG 0.523420 2_1:+7146854 None:intergenic
AAAACATTCAAGTTTCAAGT+AGG 0.523540 2_1:+7143855 None:intergenic
TGTGCTCTTCTAGCTGGAGG+TGG 0.523769 2_1:-7155849 Msa0191540:five_prime_UTR
CAAGGTGCTAGCCCCTATCC+AGG 0.525316 2_1:-7156872 Msa0191540:five_prime_UTR
GGCAAGCGTCTCACTGTACA+AGG 0.526294 2_1:-7145192 Msa0191540:intron
GGCAAGCGTCTCACTGTACA+AGG 0.526294 2_1:-7154861 Msa0191540:intron
CAAGGTGCAAGCCCCTATCC+AGG 0.528336 2_1:-7146793 Msa0191540:CDS
TGAAGTTCTACAACTTCAAG+AGG 0.532066 2_1:-7146920 Msa0191540:CDS
CAGATTCATGGAGGTTCAAG+TGG 0.533168 2_1:-7155472 Msa0191540:five_prime_UTR
GATGTTATTCTTGATTGTAT+GGG 0.533185 2_1:-7145324 Msa0191540:CDS
GATGTTATTCTTGATTGTAT+GGG 0.533185 2_1:-7154993 Msa0191540:five_prime_UTR
GCCTCCGCAGCTTCAGAAAG+AGG 0.533973 2_1:+7144116 None:intergenic
TAGGGGCTAGCACCTTGAGG+GGG 0.534054 2_1:+7156878 None:intergenic
CAGGTTCATGGAGGTTCAAG+TGG 0.534759 2_1:-7145796 Msa0191540:CDS
ATGTGTTATTAATTGTGTAC+TGG 0.535376 2_1:-7153642 Msa0191540:five_prime_UTR
TGAGTGAGAGTAAATGAAAG+TGG 0.536452 2_1:-7153530 Msa0191540:intron
GTGTTATTAATTCTGTACTA+GGG 0.537066 2_1:-7143918 Msa0191540:three_prime_UTR
ACCGGAAGAACTTGTCCCTC+AGG 0.537543 2_1:+7146125 None:intergenic
GGCTTGCACCTTGAGGGATA+GGG 0.540973 2_1:+7146803 None:intergenic
TTATTAATTGTGTACTGGTA+GGG 0.541579 2_1:-7153637 Msa0191540:five_prime_UTR
TTAGTGTGAGAGAGAAGAGA+AGG 0.542193 2_1:-7157086 None:intergenic
AGAGAAGAGAAGGAAAGTTG+TGG 0.543155 2_1:-7157076 Msa0191540:five_prime_UTR
GGATAGGGGCTTGCACCTTG+AGG 0.546687 2_1:+7146796 None:intergenic
TTGGCAGCAAATTGAGTGAG+AGG 0.549845 2_1:-7143834 Msa0191540:three_prime_UTR
TCTGGAATCATTGAATCCGT+TGG 0.550779 2_1:-7156839 Msa0191540:five_prime_UTR
TCTGGAACTATTGAATCCGT+TGG 0.554523 2_1:-7146760 Msa0191540:CDS
GCTGACTGCTTTCCATAAGC+CGG 0.555663 2_1:+7144090 None:intergenic
GCTGACTGCTTTCCATAAGC+CGG 0.555663 2_1:+7153814 None:intergenic
AACAGAGGACTTTGTAGCAA+GGG 0.557510 2_1:-7155184 Msa0191540:five_prime_UTR
ATGACAAGCCGGCTATCTAA+GGG 0.558435 2_1:-7155708 Msa0191540:five_prime_UTR
TGTGCTCTTCTAGCTGGAGG+TGG 0.560275 2_1:-7146170 Msa0191540:CDS
AAGGAAGAAACTGGCGGACA+AGG 0.566694 2_1:-7145490 Msa0191540:intron
AAGGAAGAAACTGGCGGACA+AGG 0.566694 2_1:-7155159 Msa0191540:intron
GTTTGGCCTGCAATTGCAGA+AGG 0.566773 2_1:-7144170 Msa0191540:CDS
GCCGATACCGTTCAAAGGAA+AGG 0.568367 2_1:-7146832 Msa0191540:CDS
TGAAGAACTTCAGGTTCACC+TGG 0.571691 2_1:+7157010 None:intergenic
AACAGAGGACTTTGTGGCAA+GGG 0.571801 2_1:-7145515 Msa0191540:CDS
CACACAGTACATGCAACCTC+AGG 0.575176 2_1:+7155744 None:intergenic
GTTATTAATTGTGTACTGGT+AGG 0.575938 2_1:-7153638 Msa0191540:five_prime_UTR
TGGAAAGATATTGCTTGTTG+TGG 0.579900 2_1:-7144063 Msa0191540:CDS
GTTGGAAACGTTTATACCAA+CGG 0.581226 2_1:+7146744 None:intergenic
CCTCCGCAGCTTCAGAAAGA+GGG 0.582608 2_1:+7144117 None:intergenic
AGCTGTGATCGTTGCTGAAG+TGG 0.584468 2_1:-7153925 Msa0191540:five_prime_UTR
GTATGTGCTCTTCTAGCTGG+AGG 0.586099 2_1:-7146173 Msa0191540:CDS
GTATGTGCTCTTCTAGCTGG+AGG 0.586099 2_1:-7155852 Msa0191540:five_prime_UTR
GATAAGCGCCTTTCCTCTGA+AGG 0.586526 2_1:+7156903 None:intergenic
GTTTGGCCTGCAATTGCAGA+AGG 0.586800 2_1:-7153894 Msa0191540:five_prime_UTR
AACATTCAAGTCCTGGATAG+GGG 0.587904 2_1:+7156861 None:intergenic
CGTTTCCAAGTGGAAAATTG+GGG 0.591119 2_1:-7156810 Msa0191540:five_prime_UTR
TGTAGAACTTCAGGTCCACC+TGG 0.592318 2_1:+7146931 None:intergenic
ATTCCCTCTTTCTGAAGCTG+CGG 0.593597 2_1:-7144120 Msa0191540:CDS
AACATTCAAGACCTGGATAG+GGG 0.603099 2_1:+7146782 None:intergenic
AAGAGTATTGGAGCTGATGT+TGG 0.603468 2_1:-7145550 Msa0191540:CDS
AAGAGTATTGGAGCTGATGT+TGG 0.603468 2_1:-7155219 Msa0191540:five_prime_UTR
TGAAGTTCTTCAACTCCAAG+AGG 0.603773 2_1:-7156999 Msa0191540:five_prime_UTR
GCCTCCGCAGCTTCAGAAAG+GGG 0.606587 2_1:+7153840 None:intergenic
TAACAAATACTCTTGATCCT+CGG 0.609699 2_1:+7145740 None:intergenic
GTTCCAGAACATTCAAGACC+TGG 0.611446 2_1:+7146775 None:intergenic
TATTGGAAAGATATTGCTTG+TGG 0.612988 2_1:-7153790 Msa0191540:five_prime_UTR
AGAAGGAAAGGTTAAGCCTG+TGG 0.612996 2_1:-7144153 Msa0191540:CDS
GCTGATACCCTTCAGAGGAA+AGG 0.613277 2_1:-7156911 Msa0191540:five_prime_UTR
AAGTTCTTCCGGTTCCACCT+GGG 0.613353 2_1:-7155794 Msa0191540:five_prime_UTR
ACAGTGCCGATACCGTTCAA+AGG 0.616788 2_1:-7146837 Msa0191540:CDS
CACTGAGGTCAAAACACACA+AGG 0.618130 2_1:+7153698 None:intergenic
ATTCAGATAGCTAAGTACCT+AGG 0.626422 2_1:-7155433 Msa0191540:five_prime_UTR
AAGTTCTTCCGGTTCCACCC+GGG 0.628530 2_1:-7146115 Msa0191540:CDS
AAACAGAGGACTTTGTAGCA+AGG 0.639577 2_1:-7155185 Msa0191540:five_prime_UTR
GCATCCTTCAGAGAAATCCC+AGG 0.642275 2_1:+7155777 None:intergenic
TTTATTATCGGCTTTCAAGG+GGG 0.643203 2_1:-7145249 Msa0191540:CDS
TTTATTATCGGCTTTCAAGG+GGG 0.643203 2_1:-7154918 Msa0191540:five_prime_UTR
CATTGATCAAGTATTTACCA+CGG 0.644635 2_1:+7144032 None:intergenic
GACAAGCCGGCTATCTAAGG+GGG 0.645311 2_1:-7146027 Msa0191540:CDS
GCATCCTTCAGAGAAATCCC+GGG 0.646597 2_1:+7146098 None:intergenic
CCTCCGCAGCTTCAGAAAGG+GGG 0.648637 2_1:+7153841 None:intergenic
ATCAATTCTCAGGTTCATGG+AGG 0.649634 2_1:-7145805 Msa0191540:intron
AAACAGAGGACTTTGTGGCA+AGG 0.650379 2_1:-7145516 Msa0191540:CDS
ATAGGGGCTAGCACCTTGAG+GGG 0.651548 2_1:+7156877 None:intergenic
GCAGTTGTAATTACAACACC+AGG 0.653000 2_1:-7146949 Msa0191540:CDS
ACAGAGCTGATACCCTTCAG+AGG 0.655552 2_1:-7156916 Msa0191540:five_prime_UTR
ATTAATTCTCAGATTCATGG+AGG 0.663589 2_1:-7155481 Msa0191540:intron
CTCAGTGTTGAATAAAGGTG+TGG 0.664966 2_1:-7153682 Msa0191540:five_prime_UTR
ATAAGCGCCTTTCCTCTGAA+GGG 0.666916 2_1:+7156904 None:intergenic
AGAAGGTAAGGTTAAGCCTG+TGG 0.670093 2_1:-7153877 Msa0191540:five_prime_UTR
CAGTGGCGTGAACTTTGATG+AGG 0.672273 2_1:+7156945 None:intergenic
GCAATTGTAATAACAACACC+AGG 0.678910 2_1:-7157028 Msa0191540:five_prime_UTR
CTGAGGTTGCATGTACTGTG+TGG 0.679898 2_1:-7155743 Msa0191540:five_prime_UTR
TGACAAGCCGGCTATCTAAG+GGG 0.683970 2_1:-7146028 Msa0191540:CDS
AATCATACGACTTACCAACA+AGG 0.697741 2_1:+7155680 None:intergenic
TCCTTCAGAGAAATCCCGGG+TGG 0.700414 2_1:+7146101 None:intergenic
TCCTTCAGAGAAATCCCAGG+TGG 0.700414 2_1:+7155780 None:intergenic
CTGAGGTTGCATGTACTGTG+TGG 0.713501 2_1:-7146064 Msa0191540:CDS
TGGTATCAATTACAAAACAG+AGG 0.714141 2_1:-7145530 Msa0191540:CDS
TGGTATCAATTACAAAACAG+AGG 0.714141 2_1:-7155199 Msa0191540:five_prime_UTR
ATTCAGATAGCTAAGTACCG+AGG 0.723680 2_1:-7145757 Msa0191540:CDS
CACACCTTTATTCAACACTG+AGG 0.737412 2_1:+7153683 None:intergenic
GTTGTAATTACAACACCAGG+TGG 0.740223 2_1:-7146946 Msa0191540:CDS
AGGGTAAAGGAAGAAACTGG+CGG 0.742355 2_1:-7145496 Msa0191540:CDS
AGGGTAAAGGAAGAAACTGG+CGG 0.742355 2_1:-7155165 Msa0191540:five_prime_UTR
TTGTTGTGGCATGAAAACCG+TGG 0.837034 2_1:-7144049 Msa0191540:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAATTAAAAAAATAA+TGG - chr2_1:7148266-7148285 Msa0191540:intron 0.0%
!! AAAAAAAAAAAAACGATTTA+TGG + chr2_1:7144115-7144134 None:intergenic 10.0%
!! TTCAAAAATAATGAAATTAA+TGG + chr2_1:7144169-7144188 None:intergenic 10.0%
!!! TTTTTAGTTATATAATATCT+AGG - chr2_1:7144244-7144263 Msa0191540:intron 10.0%
!! TAATTACTAATATTTAAGAA+AGG + chr2_1:7146652-7146671 None:intergenic 10.0%
!!! ATAAAGTGATTTTTATAAAA+TGG + chr2_1:7147731-7147750 None:intergenic 10.0%
!!! TTTTTACAAAAAAGAAAAAT+AGG + chr2_1:7147867-7147886 None:intergenic 10.0%
!!! AAAAAATATATATGAAGTTT+TGG - chr2_1:7147882-7147901 Msa0191540:intron 10.0%
!! AAAAAAAAACCAAAAAAATT+TGG + chr2_1:7149196-7149215 None:intergenic 10.0%
!!! TTATTTTAAACATAATATAC+AGG - chr2_1:7150404-7150423 Msa0191540:intron 10.0%
!!! TATTTTAAACATAATATACA+GGG - chr2_1:7150405-7150424 Msa0191540:intron 10.0%
!! TAATTACTAATAATTAAGAA+AGG + chr2_1:7152204-7152223 None:intergenic 10.0%
!!! TATCATTCTTTAATATTTTA+TGG - chr2_1:7152450-7152469 Msa0191540:intron 10.0%
!!! GTTTAAAATATCTTTTAATT+CGG + chr2_1:7152657-7152676 None:intergenic 10.0%
!! AGAAAAATGTATAAATAAAA+GGG + chr2_1:7153344-7153363 None:intergenic 10.0%
!! AAGAAAAATGTATAAATAAA+AGG + chr2_1:7153345-7153364 None:intergenic 10.0%
!! ATCAAATATTAAAAAATGAT+AGG + chr2_1:7156606-7156625 None:intergenic 10.0%
!!! ATTTTTTAATATTTGATTGT+GGG - chr2_1:7156609-7156628 Msa0191540:intron 10.0%
!!! TAATTTCATTATTTTTGAAG+TGG - chr2_1:7144170-7144189 Msa0191540:CDS 15.0%
!!! AATTTCATTATTTTTGAAGT+GGG - chr2_1:7144171-7144190 Msa0191540:CDS 15.0%
!!! TTATTTTGAAAATTGAATTG+TGG - chr2_1:7144200-7144219 Msa0191540:CDS 15.0%
!!! TATTTTGAAAATTGAATTGT+GGG - chr2_1:7144201-7144220 Msa0191540:CDS 15.0%
!! AAATCAATAATTCAAATCAA+AGG + chr2_1:7144285-7144304 None:intergenic 15.0%
!! CTTAATTATTAGTAAACATT+AGG - chr2_1:7144307-7144326 Msa0191540:intron 15.0%
!!! TTAAAAATAAGTTTTGTATG+AGG - chr2_1:7146786-7146805 Msa0191540:CDS 15.0%
!!! TAATTTTATTTTGATACTAG+TGG + chr2_1:7148038-7148057 None:intergenic 15.0%
!! AATTATGTCAAAAAAATTGA+TGG - chr2_1:7148162-7148181 Msa0191540:intron 15.0%
!! AAAATGGAATTAAAGAAAAT+TGG - chr2_1:7148609-7148628 Msa0191540:intron 15.0%
!!! ATAAAAATAAGTTTTGTATG+AGG - chr2_1:7152351-7152370 Msa0191540:intron 15.0%
!!! TTTTAACAAAATTTGTTTGA+TGG - chr2_1:7152756-7152775 Msa0191540:intron 15.0%
!!! AATTATTTTTTACATGATGA+AGG - chr2_1:7153085-7153104 Msa0191540:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr2_1:7153280-7153299 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr2_1:7153281-7153300 None:intergenic 15.0%
!! AAAGTGAAATATATTGTATT+GGG + chr2_1:7153321-7153340 None:intergenic 15.0%
!! AAAATTGTGTCAATTAAATT+GGG - chr2_1:7153381-7153400 Msa0191540:intron 15.0%
!! AAAGAAATAAACAAGTAAAA+GGG + chr2_1:7153439-7153458 None:intergenic 15.0%
!! AAAAGAAATAAACAAGTAAA+AGG + chr2_1:7153440-7153459 None:intergenic 15.0%
!! TAACTTAAAAACTAAATAGT+TGG - chr2_1:7153739-7153758 Msa0191540:five_prime_UTR 15.0%
!! AACTTAAAAACTAAATAGTT+GGG - chr2_1:7153740-7153759 Msa0191540:five_prime_UTR 15.0%
!! TATATTCAATAATTGAATTG+TGG - chr2_1:7154221-7154240 Msa0191540:intron 15.0%
!! ATATTCAATAATTGAATTGT+GGG - chr2_1:7154222-7154241 Msa0191540:intron 15.0%
!! TTAAAAAACAAGATATGAAT+TGG + chr2_1:7155478-7155497 None:intergenic 15.0%
!!! TTCATATCTTGTTTTTTAAT+TGG - chr2_1:7155479-7155498 Msa0191540:intron 15.0%
!!! CATTTTTTAATATTTGATTG+TGG - chr2_1:7156608-7156627 Msa0191540:intron 15.0%
!! TTTATTAATTCTCAGATTCA+TGG - chr2_1:7145393-7145412 Msa0191540:intron 20.0%
!!! TTGTATCTTTGTTTTCTAAT+TGG - chr2_1:7145810-7145829 Msa0191540:intron 20.0%
!! AGTTTATGAAATTTCACTTA+AGG - chr2_1:7146222-7146241 Msa0191540:intron 20.0%
!! ATATGTATACTCTTAAGAAT+TGG + chr2_1:7146585-7146604 None:intergenic 20.0%
!! GTTGAATATTAAAGAATGAT+AGG + chr2_1:7146882-7146901 None:intergenic 20.0%
!! ATTCTTTAATATTCAACTGT+GGG - chr2_1:7146885-7146904 Msa0191540:CDS 20.0%
!! TACACAATTAATAACACATT+TGG + chr2_1:7147234-7147253 None:intergenic 20.0%
!! TTGATTAATTGAAAAAACCA+AGG - chr2_1:7147404-7147423 Msa0191540:intron 20.0%
!!! GAATAGATTTTGTTGTAATT+TGG + chr2_1:7147473-7147492 None:intergenic 20.0%
!!! AAATTAACTTCTGTGATTTT+CGG + chr2_1:7147606-7147625 None:intergenic 20.0%
!! TTACAAAAAAGAAAAATAGG+TGG + chr2_1:7147864-7147883 None:intergenic 20.0%
!!! ATTTTTAAAATCCGTTTTCT+TGG - chr2_1:7147909-7147928 Msa0191540:intron 20.0%
!! ATGCCAAAAAAATAAATTAG+GGG + chr2_1:7147937-7147956 None:intergenic 20.0%
!! CATGCCAAAAAAATAAATTA+GGG + chr2_1:7147938-7147957 None:intergenic 20.0%
!! TCATGCCAAAAAAATAAATT+AGG + chr2_1:7147939-7147958 None:intergenic 20.0%
!! AAATACTAGTATGTTATGTT+TGG - chr2_1:7149003-7149022 Msa0191540:intron 20.0%
!!! CATAGTTTTTTTTTTTGTTG+AGG - chr2_1:7149277-7149296 Msa0191540:intron 20.0%
!!! GATAATTATTCACATTGTTT+TGG + chr2_1:7149529-7149548 None:intergenic 20.0%
!! ATATTTACAATTGCGAAAAA+TGG - chr2_1:7149583-7149602 Msa0191540:intron 20.0%
!! CCAATAATTTATCAAAGAAA+TGG + chr2_1:7150081-7150100 None:intergenic 20.0%
!! CCATTTCTTTGATAAATTAT+TGG - chr2_1:7150078-7150097 Msa0191540:intron 20.0%
!! CTTTGATAAATTATTGGTAA+AGG - chr2_1:7150084-7150103 Msa0191540:intron 20.0%
!! ATAAATTATTGGTAAAGGAT+GGG - chr2_1:7150089-7150108 Msa0191540:intron 20.0%
!! TAAACTTAATACTTGACTTA+TGG - chr2_1:7150219-7150238 Msa0191540:intron 20.0%
!! CTGTAAAACAAATATAATCT+TGG - chr2_1:7150342-7150361 Msa0191540:intron 20.0%
!!! TTCTTAATTTCTTTTTTCCA+AGG - chr2_1:7150983-7151002 Msa0191540:intron 20.0%
!! ATTCATCAATAAAAACACAT+AGG - chr2_1:7151022-7151041 Msa0191540:intron 20.0%
!!! TTCACTGAAACATTTTAAAT+GGG + chr2_1:7151533-7151552 None:intergenic 20.0%
!!! TTGAAATCTATTTTGTTGAA+AGG - chr2_1:7151663-7151682 Msa0191540:intron 20.0%
!!! TGACTTTTTAAGTCAAATAA+TGG - chr2_1:7151893-7151912 Msa0191540:intron 20.0%
!!! ACAAGTTTGAATTTTTAAAC+TGG - chr2_1:7152021-7152040 Msa0191540:intron 20.0%
!! AAAATATGTATACTCTAAGT+TGG + chr2_1:7152143-7152162 None:intergenic 20.0%
!!! AATGAGAAGTTTATTTTAAG+TGG - chr2_1:7152411-7152430 Msa0191540:intron 20.0%
!!! GTTTATTTTAAGTGGTTTTA+TGG - chr2_1:7152419-7152438 Msa0191540:intron 20.0%
!!! CATTCTTTAATATTTTATGG+TGG - chr2_1:7152453-7152472 Msa0191540:intron 20.0%
!! ATACATATTGTAAACTAACA+AGG + chr2_1:7152629-7152648 None:intergenic 20.0%
!!! AAAATATCTTTTAATTCGGA+GGG + chr2_1:7152653-7152672 None:intergenic 20.0%
!!! TAAAATATCTTTTAATTCGG+AGG + chr2_1:7152654-7152673 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr2_1:7153211-7153230 None:intergenic 20.0%
!! GAAAGTGAAATATATTGTAT+TGG + chr2_1:7153322-7153341 None:intergenic 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG - chr2_1:7153380-7153399 Msa0191540:intron 20.0%
!! AAGAAATAAACAAGTAAAAG+GGG + chr2_1:7153438-7153457 None:intergenic 20.0%
!! ATCTATCTAAATTGAAGTTT+AGG - chr2_1:7153695-7153714 Msa0191540:five_prime_UTR 20.0%
!! TCTATCTAAATTGAAGTTTA+GGG - chr2_1:7153696-7153715 Msa0191540:five_prime_UTR 20.0%
!! GTAAAATCAAAAGAAAATGA+AGG - chr2_1:7153906-7153925 Msa0191540:five_prime_UTR 20.0%
!!! TTTCATTCATTTTTTCCAAT+TGG - chr2_1:7154189-7154208 Msa0191540:intron 20.0%
!!! TTCATTCATTTTTTCCAATT+GGG - chr2_1:7154190-7154209 Msa0191540:intron 20.0%
!! AATATAAAGAAAAACCCAAT+TGG + chr2_1:7154207-7154226 None:intergenic 20.0%
!! ATACTATATATATGATGTTC+TGG + chr2_1:7154286-7154305 None:intergenic 20.0%
!! AAGTTAATACATCAACTATT+AGG + chr2_1:7155051-7155070 None:intergenic 20.0%
!! ATATAGATCATATAATGTTG+AGG + chr2_1:7155451-7155470 None:intergenic 20.0%
!! TGAGTATCTAATATACAAAA+GGG + chr2_1:7155731-7155750 None:intergenic 20.0%
!!! TTTATAACAAGTTTTGTATG+AGG - chr2_1:7156509-7156528 Msa0191540:intron 20.0%
!!! ACTTTTGAATAATTTGAGTT+TGG - chr2_1:7156883-7156902 Msa0191540:five_prime_UTR 20.0%
!! TTCTAACCTTAAATAATTTG+TGG - chr2_1:7156917-7156936 Msa0191540:five_prime_UTR 20.0%
!! TGTAAACCACAAATTATTTA+AGG + chr2_1:7156926-7156945 None:intergenic 20.0%
! AATCAAAGCAACAAAAATGA+AGG - chr2_1:7143827-7143846 Msa0191540:three_prime_UTR 25.0%
!!! TGGATTTTAACTTCGAATTA+TGG + chr2_1:7144149-7144168 None:intergenic 25.0%
! TCAGATAAGTTAATACAAAC+AGG - chr2_1:7144607-7144626 Msa0191540:intron 25.0%
! TCGTTTACATTTATAATCAC+TGG + chr2_1:7144652-7144671 None:intergenic 25.0%
! TGAATGGATATTATGATATG+AGG - chr2_1:7144987-7145006 Msa0191540:intron 25.0%
!!! TCCTGGGTTATTTTATTATT+TGG - chr2_1:7145337-7145356 Msa0191540:intron 25.0%
! ACCAAATAATAAAATAACCC+AGG + chr2_1:7145341-7145360 None:intergenic 25.0%
! AAGTTAATACGTCAACTATT+AGG + chr2_1:7145375-7145394 None:intergenic 25.0%
! TATTCTAGATATTGCTAAAC+AGG - chr2_1:7145610-7145629 Msa0191540:intron 25.0%
! CTATAGATCATATAATGTTG+CGG + chr2_1:7145781-7145800 None:intergenic 25.0%
! TAGAAAACAAAGATACAAAG+CGG + chr2_1:7145808-7145827 None:intergenic 25.0%
! TGATGTTATTCTTGATTGTA+TGG - chr2_1:7145883-7145902 Msa0191540:intron 25.0%
! GATGTTATTCTTGATTGTAT+GGG - chr2_1:7145884-7145903 Msa0191540:intron 25.0%
!!! TTTTTATTATCGGCTTTCAA+GGG - chr2_1:7145957-7145976 Msa0191540:intron 25.0%
! TATGAAATTTCACTTAAGGT+TGG - chr2_1:7146226-7146245 Msa0191540:intron 25.0%
! ATGAAATTTCACTTAAGGTT+GGG - chr2_1:7146227-7146246 Msa0191540:intron 25.0%
! GCAAAACAAAATTTGTAAGT+TGG + chr2_1:7146287-7146306 None:intergenic 25.0%
!!! ATCATGCAATGTATTGATTA+TGG - chr2_1:7146390-7146409 Msa0191540:intron 25.0%
!!! TGTATTGATTATGGCTATAT+AGG - chr2_1:7146399-7146418 Msa0191540:intron 25.0%
!!! GTATTGATTATGGCTATATA+GGG - chr2_1:7146400-7146419 Msa0191540:intron 25.0%
!! TTACTTGTTAGTAATGTTAG+TGG - chr2_1:7146676-7146695 Msa0191540:intron 25.0%
!! TACTTGTTAGTAATGTTAGT+GGG - chr2_1:7146677-7146696 Msa0191540:intron 25.0%
!! TTCTTTTATTAGTGTGGTTA+TGG - chr2_1:7146850-7146869 Msa0191540:CDS 25.0%
! CATTCTTTAATATTCAACTG+TGG - chr2_1:7146884-7146903 Msa0191540:CDS 25.0%
!! ATGTGTTATTAATTGTGTAC+TGG - chr2_1:7147235-7147254 Msa0191540:intron 25.0%
!! TTATTAATTGTGTACTGGTA+GGG - chr2_1:7147240-7147259 Msa0191540:intron 25.0%
! AAAACCAAGGATCATAAAAA+TGG - chr2_1:7147417-7147436 Msa0191540:intron 25.0%
!!! TTAATTTCCTTTGAGATTGA+AGG - chr2_1:7147619-7147638 Msa0191540:intron 25.0%
! ACCAAAAACGATATAATTGT+AGG - chr2_1:7147794-7147813 Msa0191540:intron 25.0%
! CCAAAAACGATATAATTGTA+GGG - chr2_1:7147795-7147814 Msa0191540:intron 25.0%
!!! GTTCCCCTAATTTATTTTTT+TGG - chr2_1:7147931-7147950 Msa0191540:intron 25.0%
! GTTTCAAATGTCAGAATATT+AGG + chr2_1:7147985-7148004 None:intergenic 25.0%
!!! CATTTTTTTAAGTAGTCTAG+TGG + chr2_1:7148595-7148614 None:intergenic 25.0%
! CACTAGACTACTTAAAAAAA+TGG - chr2_1:7148593-7148612 Msa0191540:intron 25.0%
! TATATTTAGAAATCGAACTC+AGG - chr2_1:7148758-7148777 Msa0191540:intron 25.0%
!!! AGAAATGGTCCAAATTTTTT+TGG - chr2_1:7149184-7149203 Msa0191540:intron 25.0%
! TTACGATTATTGTTCTGATT+TGG - chr2_1:7149217-7149236 Msa0191540:intron 25.0%
!! TTTTGTTGAGGATAATGTTA+TGG - chr2_1:7149289-7149308 Msa0191540:intron 25.0%
! GGATGTAATTATAACCTTAA+AGG - chr2_1:7149429-7149448 Msa0191540:intron 25.0%
! AATTATAACCTTAAAGGTAG+AGG - chr2_1:7149435-7149454 Msa0191540:intron 25.0%
!! TTCTTTGACACATTTGAAAT+GGG + chr2_1:7149938-7149957 None:intergenic 25.0%
!! TTTTTCTTAATTGAGAGCTT+TGG + chr2_1:7149965-7149984 None:intergenic 25.0%
! GATAAATTATTGGTAAAGGA+TGG - chr2_1:7150088-7150107 Msa0191540:intron 25.0%
!!! TTGTTTTACAGCACAATTAT+TGG + chr2_1:7150333-7150352 None:intergenic 25.0%
! AAAAGAGAGTAGTTTATGTT+TGG + chr2_1:7150486-7150505 None:intergenic 25.0%
!! AAACATAAACTACTCTCTTT+TGG - chr2_1:7150485-7150504 Msa0191540:intron 25.0%
! TACAAATCATAAATTTCAGG+AGG + chr2_1:7150584-7150603 None:intergenic 25.0%
! ACACTAACATTAAGTTAACT+TGG - chr2_1:7150636-7150655 Msa0191540:intron 25.0%
!! ATTCAGTTAATAGAAGCATA+AGG - chr2_1:7150904-7150923 Msa0191540:intron 25.0%
! TGATTAGACAAAAACTATAG+AGG - chr2_1:7151078-7151097 Msa0191540:intron 25.0%
! GATTAGACAAAAACTATAGA+GGG - chr2_1:7151079-7151098 Msa0191540:intron 25.0%
!! GACATTACATTTTGTACAAT+AGG + chr2_1:7151197-7151216 None:intergenic 25.0%
!! GTTCACTGAAACATTTTAAA+TGG + chr2_1:7151534-7151553 None:intergenic 25.0%
! TTGAAAGGATTGTTAAATGA+TGG - chr2_1:7151678-7151697 Msa0191540:intron 25.0%
! TGAAAGGATTGTTAAATGAT+GGG - chr2_1:7151679-7151698 Msa0191540:intron 25.0%
! TATCAATATGAATTCAACAC+CGG + chr2_1:7151829-7151848 None:intergenic 25.0%
! TACAAATCATAAATGTTAGG+AGG - chr2_1:7151917-7151936 Msa0191540:intron 25.0%
!! TACTTGTTAGTATTGTCAAT+AGG - chr2_1:7152229-7152248 Msa0191540:intron 25.0%
! CAATAGTGAAATTGAAAATC+TGG + chr2_1:7152390-7152409 None:intergenic 25.0%
!!! TTTTGAAAGATCATGCAATT+GGG + chr2_1:7153136-7153155 None:intergenic 25.0%
!!! TTTTTGAAAGATCATGCAAT+TGG + chr2_1:7153137-7153156 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr2_1:7153212-7153231 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + chr2_1:7153233-7153252 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + chr2_1:7153234-7153253 None:intergenic 25.0%
!!! AGTATTGTTTATGCTTTTTG+TGG - chr2_1:7153412-7153431 Msa0191540:intron 25.0%
!! AATGATGATGATATAAGTGA+TGG - chr2_1:7153615-7153634 Msa0191540:five_prime_UTR 25.0%
! TGAGAGTAATAATAGTTTAG+AGG - chr2_1:7153763-7153782 Msa0191540:five_prime_UTR 25.0%
! CTAAAACTAGAACTAGAATA+AGG - chr2_1:7154388-7154407 Msa0191540:intron 25.0%
!! TTAAGTGATGATAAGTGTTT+TGG - chr2_1:7154434-7154453 Msa0191540:intron 25.0%
! TGTTATCTTGTGATTATGAA+TGG - chr2_1:7154650-7154669 Msa0191540:intron 25.0%
! AATCATACAACTTACCAATA+AGG + chr2_1:7154879-7154898 None:intergenic 25.0%
!! GTATTTTACAGAAAAGTTGT+CGG + chr2_1:7154910-7154929 None:intergenic 25.0%
! ACGAAATAATAAAATAGACC+AGG + chr2_1:7155017-7155036 None:intergenic 25.0%
! TATTAACTTCATCAATTCTC+AGG - chr2_1:7155062-7155081 Msa0191540:intron 25.0%
! TCAGTTTCACATTAAACATA+CGG + chr2_1:7155205-7155224 None:intergenic 25.0%
! ATTCACATCATGATTCATAT+AGG + chr2_1:7155418-7155437 None:intergenic 25.0%
! AGGTAATATTATCATTGATG+TGG - chr2_1:7155519-7155538 Msa0191540:intron 25.0%
! TAATATTATCATTGATGTGG+TGG - chr2_1:7155522-7155541 Msa0191540:intron 25.0%
! TGATGTTATTCTTGATTGTA+TGG - chr2_1:7145883-7145902 Msa0191540:intron 25.0%
! GATGTTATTCTTGATTGTAT+GGG - chr2_1:7145884-7145903 Msa0191540:intron 25.0%
!! ATCAAGATTTCTTTGATAGT+AGG + chr2_1:7155584-7155603 None:intergenic 25.0%
!!! CTTGATAGCTTAAATTTTGA+TGG - chr2_1:7155598-7155617 Msa0191540:intron 25.0%
!!! ATAGCTTAAATTTTGATGGA+AGG - chr2_1:7155602-7155621 Msa0191540:intron 25.0%
!!! TTTTTATTATCGGCTTTCAA+GGG - chr2_1:7145957-7145976 Msa0191540:intron 25.0%
! GTGAGTATCTAATATACAAA+AGG + chr2_1:7155732-7155751 None:intergenic 25.0%
! ACTTTATGAAATTTCACCTA+AGG - chr2_1:7155900-7155919 Msa0191540:intron 25.0%
!!! TATTGTAGGCTTTTTTTTCA+TGG + chr2_1:7156071-7156090 None:intergenic 25.0%
! ATTGTGAGATTCATTATTGT+AGG + chr2_1:7156085-7156104 None:intergenic 25.0%
!!! GTATTGATGATGACTATATA+AGG - chr2_1:7156105-7156124 Msa0191540:intron 25.0%
! ATGTTGCAAAATATCTACTA+AGG + chr2_1:7156156-7156175 None:intergenic 25.0%
!! TAGTAGATATTTTGCAACAT+TGG - chr2_1:7156156-7156175 Msa0191540:intron 25.0%
! CTAATATGACCAACTTTAAT+CGG + chr2_1:7156260-7156279 None:intergenic 25.0%
! AAGGTGATTGGTATTTATAA+AGG + chr2_1:7156435-7156454 None:intergenic 25.0%
!! TCTTTTTATTAGTGTGGTTA+TGG - chr2_1:7156574-7156593 Msa0191540:intron 25.0%
!! TGTGTTATTAATTCTGTACT+AGG - chr2_1:7156958-7156977 Msa0191540:five_prime_UTR 25.0%
!! GTGTTATTAATTCTGTACTA+GGG - chr2_1:7156959-7156978 Msa0191540:five_prime_UTR 25.0%
!! AAAACATTCAAGTTTCAAGT+AGG + chr2_1:7157025-7157044 None:intergenic 25.0%
!! TACTTGAAACTTGAATGTTT+TGG - chr2_1:7157024-7157043 Msa0191540:five_prime_UTR 25.0%
! AGGAAATGAAAGAATGAAAA+TGG - chr2_1:7157063-7157082 Msa0191540:five_prime_UTR 25.0%
! GGAAATGAAAGAATGAAAAT+GGG - chr2_1:7157064-7157083 Msa0191540:five_prime_UTR 25.0%
TTTGATAAGTTATCCTAGAG+AGG - chr2_1:7144479-7144498 Msa0191540:intron 30.0%
CTACAAGCACTAAATTAAGT+TGG + chr2_1:7144690-7144709 None:intergenic 30.0%
!!! GCTGTTTTTATAAGCTATCT+TGG - chr2_1:7144778-7144797 Msa0191540:intron 30.0%
ATATTATGATATGAGGTGTG+TGG - chr2_1:7144994-7145013 Msa0191540:intron 30.0%
!!! CAACTATTTTTATGACAAGC+CGG - chr2_1:7145158-7145177 Msa0191540:intron 30.0%
! TGTAATCAGTTCATCTTTTC+AGG - chr2_1:7145219-7145238 Msa0191540:CDS 30.0%
ATTAATTCTCAGATTCATGG+AGG - chr2_1:7145396-7145415 Msa0191540:intron 30.0%
TAACAAATACTCTTGATCCT+AGG + chr2_1:7145464-7145483 None:intergenic 30.0%
CAGTTTCATGTCTAAACATA+CGG + chr2_1:7145535-7145554 None:intergenic 30.0%
AATTTGAAGATACGAGAAAC+TGG + chr2_1:7145567-7145586 None:intergenic 30.0%
TGGTATCAATTACAAAACAG+AGG - chr2_1:7145678-7145697 Msa0191540:intron 30.0%
AATTCACATCATGTTCACAT+AGG + chr2_1:7145749-7145768 None:intergenic 30.0%
! AGCAAGATTTCTTTGATAGT+AGG + chr2_1:7145915-7145934 None:intergenic 30.0%
!! CTTGCTAGCTTAAATTTTGA+TGG - chr2_1:7145929-7145948 Msa0191540:intron 30.0%
!! CTAGCTTAAATTTTGATGGA+AGG - chr2_1:7145933-7145952 Msa0191540:intron 30.0%
! GATGGAAGGCTTTTTATTAT+CGG - chr2_1:7145947-7145966 Msa0191540:intron 30.0%
!!! CTTTTTATTATCGGCTTTCA+AGG - chr2_1:7145956-7145975 Msa0191540:intron 30.0%
!!! TTTTATTATCGGCTTTCAAG+GGG - chr2_1:7145958-7145977 Msa0191540:intron 30.0%
AGTGAGTATCTACTAGAAAA+GGG + chr2_1:7146063-7146082 None:intergenic 30.0%
AAATTACTAATGTCAGTGAC+AGG + chr2_1:7146188-7146207 None:intergenic 30.0%
ATCTTTCTTGACATTTGCAT+CGG - chr2_1:7146325-7146344 Msa0191540:intron 30.0%
! ATTTAGTTTCTTTGCATGTC+AGG + chr2_1:7146477-7146496 None:intergenic 30.0%
AGAAACTAAATTCTTGTGTC+AGG - chr2_1:7146486-7146505 Msa0191540:intron 30.0%
! ACTTGTTAGTAATGTTAGTG+GGG - chr2_1:7146678-7146697 Msa0191540:intron 30.0%
!! TCTGTAGACACATCATTTTT+AGG - chr2_1:7146742-7146761 Msa0191540:CDS 30.0%
! TAGCTTTTCCACTATTGAAA+TGG - chr2_1:7146823-7146842 Msa0191540:CDS 30.0%
! AGCTTTTCCACTATTGAAAT+GGG - chr2_1:7146824-7146843 Msa0191540:CDS 30.0%
TATTGGAAAGATATTGCTTG+TGG - chr2_1:7147087-7147106 Msa0191540:intron 30.0%
! GTTATTAATTGTGTACTGGT+AGG - chr2_1:7147239-7147258 Msa0191540:intron 30.0%
TTAACTTCTTTCTTCTGCTT+TGG - chr2_1:7147271-7147290 Msa0191540:intron 30.0%
!!! AATGCCATTTTTATGATCCT+TGG + chr2_1:7147424-7147443 None:intergenic 30.0%
! CCCTACAATTATATCGTTTT+TGG + chr2_1:7147798-7147817 None:intergenic 30.0%
!! CCAAAATTGCTTTTAAGTCT+AGG + chr2_1:7147840-7147859 None:intergenic 30.0%
! CCTAGACTTAAAAGCAATTT+TGG - chr2_1:7147837-7147856 Msa0191540:intron 30.0%
TCCAATATAATTAAGCCATG+CGG - chr2_1:7147959-7147978 Msa0191540:intron 30.0%
TTAATTCATTGCGTGTCTAT+TGG + chr2_1:7148093-7148112 None:intergenic 30.0%
TAATAGTGTGTTTGGATTGA+GGG + chr2_1:7148562-7148581 None:intergenic 30.0%
TGAACATCTAATAGTGTGTT+TGG + chr2_1:7148570-7148589 None:intergenic 30.0%
! TGTCAGATTTTACTTACAAG+AGG + chr2_1:7148729-7148748 None:intergenic 30.0%
!! TTTGGTTTGAGAATAAGAGA+GGG - chr2_1:7148835-7148854 Msa0191540:intron 30.0%
TTTATCAACATTGAACCAAG+AGG + chr2_1:7148986-7149005 None:intergenic 30.0%
AAGTGTTTATATAGCCTAGA+TGG - chr2_1:7149065-7149084 Msa0191540:intron 30.0%
! CTGTATCGTTCCAATTTTAT+CGG + chr2_1:7149119-7149138 None:intergenic 30.0%
ATGCCATATTATTGTGTTTG+CGG - chr2_1:7149391-7149410 Msa0191540:intron 30.0%
AAGGTTATAATTACATCCTG+AGG + chr2_1:7149427-7149446 None:intergenic 30.0%
!!! TATCTCTTGTTTTTCCATCA+AGG - chr2_1:7149545-7149564 Msa0191540:intron 30.0%
!! GCAAGTATTGAAATGAAGTT+TGG - chr2_1:7149768-7149787 Msa0191540:intron 30.0%
GTTCTTTGACACATTTGAAA+TGG + chr2_1:7149939-7149958 None:intergenic 30.0%
TTTCAAATGTGTCAAAGAAC+AGG - chr2_1:7149939-7149958 Msa0191540:intron 30.0%
! AGTATGTGAATGATTTGTGA+TGG - chr2_1:7150007-7150026 Msa0191540:intron 30.0%
! CCATCTCATTTGACTTATAA+GGG + chr2_1:7150193-7150212 None:intergenic 30.0%
GGCTACAAATCATAAATTTC+AGG + chr2_1:7150587-7150606 None:intergenic 30.0%
TAATGTTAGTGTGCATTCTA+AGG + chr2_1:7150628-7150647 None:intergenic 30.0%
AACTGAATCTATCTTCATCT+AGG + chr2_1:7150892-7150911 None:intergenic 30.0%
!! ATTAAGAAGCATTCTCTCTA+AGG + chr2_1:7150971-7150990 None:intergenic 30.0%
TACTTTGTATGTCATTCAGA+CGG - chr2_1:7151112-7151131 Msa0191540:intron 30.0%
TTTCACCCATTCTCAATAAA+GGG - chr2_1:7151140-7151159 Msa0191540:intron 30.0%
! CTTTTCCCTTTATTGAGAAT+GGG + chr2_1:7151148-7151167 None:intergenic 30.0%
ATATTACTTCTCGCTTCAAT+GGG + chr2_1:7151262-7151281 None:intergenic 30.0%
TTCAGACATGATTATCCAAT+GGG + chr2_1:7151323-7151342 None:intergenic 30.0%
ATTCAGACATGATTATCCAA+TGG + chr2_1:7151324-7151343 None:intergenic 30.0%
ATTTACCTGTAGCTATTAGA+CGG + chr2_1:7151505-7151524 None:intergenic 30.0%
GAAAGGATTGTTAAATGATG+GGG - chr2_1:7151680-7151699 Msa0191540:intron 30.0%
GGCTACAAATCATAAATGTT+AGG - chr2_1:7151914-7151933 Msa0191540:intron 30.0%
GCTAGAAAATCATTCAAACA+TGG + chr2_1:7152107-7152126 None:intergenic 30.0%
TTTGCTGATGAACATATAGT+TGG + chr2_1:7152283-7152302 None:intergenic 30.0%
AAAATGACGATAAGGTGATT+TGG + chr2_1:7152309-7152328 None:intergenic 30.0%
!!! ATCACCTTATCGTCATTTTT+AGG - chr2_1:7152310-7152329 Msa0191540:intron 30.0%
AATGCCTAAAAATGACGATA+AGG + chr2_1:7152317-7152336 None:intergenic 30.0%
!! TGGTTTGGTTCAAATTACAA+AGG + chr2_1:7152998-7153017 None:intergenic 30.0%
! TTTTTGACAGGACTATTTTC+TGG + chr2_1:7153018-7153037 None:intergenic 30.0%
! TCTGAGTTTAGATTTTTGAC+AGG + chr2_1:7153030-7153049 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG - chr2_1:7153385-7153404 Msa0191540:intron 30.0%
TTGAGCATAAACACAATTGT+CGG + chr2_1:7153560-7153579 None:intergenic 30.0%
AGTCAACTTATTTATTGTCC+CGG + chr2_1:7153831-7153850 None:intergenic 30.0%
ATGAGTACTTCATTGTCTTT+AGG + chr2_1:7153997-7154016 None:intergenic 30.0%
! TGTTCTGGTTATTATAGAAC+TGG + chr2_1:7154271-7154290 None:intergenic 30.0%
GAGTAGGTAATTCAAATCAA+AGG + chr2_1:7154312-7154331 None:intergenic 30.0%
GTTTAATAATCAAGCTGAGT+AGG + chr2_1:7154328-7154347 None:intergenic 30.0%
AACTAGAATAAGGTTCTGTT+TGG - chr2_1:7154398-7154417 Msa0191540:intron 30.0%
TGAATGGATATTATGATACG+AGG - chr2_1:7154666-7154685 Msa0191540:intron 30.0%
TAACAAATACTCTTGATCCT+CGG + chr2_1:7145464-7145483 None:intergenic 30.0%
TATTCCAGATATTTCTTAGC+AGG - chr2_1:7155279-7155298 Msa0191540:intron 30.0%
TGGTATCAATTACAAAACAG+AGG - chr2_1:7145678-7145697 Msa0191540:intron 30.0%
ATATAATGTTGAGGAATGCT+TGG + chr2_1:7155442-7155461 None:intergenic 30.0%
! GATGGAAGGCTTTTTATTAT+CGG - chr2_1:7145947-7145966 Msa0191540:intron 30.0%
!!! CTTTTTATTATCGGCTTTCA+AGG - chr2_1:7145956-7145975 Msa0191540:intron 30.0%
!!! TTTTATTATCGGCTTTCAAG+GGG - chr2_1:7145958-7145977 Msa0191540:intron 30.0%
TGCTTGTACAAGTAAAAACA+CGG - chr2_1:7155795-7155814 Msa0191540:five_prime_UTR 30.0%
AAATTGCTAATGTAAGTGAC+TGG + chr2_1:7155866-7155885 None:intergenic 30.0%
TATGAAATTTCACCTAAGGT+TGG - chr2_1:7155904-7155923 Msa0191540:intron 30.0%
ATGAAATTTCACCTAAGGTT+GGG - chr2_1:7155905-7155924 Msa0191540:intron 30.0%
TTGCAAAATATCTACTAAGG+CGG + chr2_1:7156153-7156172 None:intergenic 30.0%
! CATTAACTACCGATTAAAGT+TGG - chr2_1:7156248-7156267 Msa0191540:intron 30.0%
AATTGAGTCAAATCAGTTAC+AGG - chr2_1:7156392-7156411 Msa0191540:intron 30.0%
ATTGAGTCAAATCAGTTACA+GGG - chr2_1:7156393-7156412 Msa0191540:intron 30.0%
ATAAATACCAATCACCTTTG+TGG - chr2_1:7156437-7156456 Msa0191540:intron 30.0%
AAAAATGATGTGTCTACAGA+AGG + chr2_1:7146742-7146761 None:intergenic 30.0%
!! TCTGTAGACACATCATTTTT+AGG - chr2_1:7146742-7146761 Msa0191540:CDS 30.0%
! AGCTTTTCCACAATTGAAAT+GGG - chr2_1:7156547-7156566 Msa0191540:intron 30.0%
! GGAAGTTCTTTTTATTAGTG+TGG - chr2_1:7156568-7156587 Msa0191540:intron 30.0%
CATTGATCAAGTATTTACCA+CGG + chr2_1:7156848-7156867 None:intergenic 30.0%
GCAATTGTAATAACAACACC+AGG - chr2_1:7143849-7143868 Msa0191540:three_prime_UTR 35.0%
!! CTTCATCGTCTTTGATTTGA+GGG + chr2_1:7143911-7143930 None:intergenic 35.0%
!! ACTTCATCGTCTTTGATTTG+AGG + chr2_1:7143912-7143931 None:intergenic 35.0%
AACGTTTCCAAGTGGAAAAT+TGG - chr2_1:7144065-7144084 Msa0191540:CDS 35.0%
ACGTTTCCAAGTGGAAAATT+GGG - chr2_1:7144066-7144085 Msa0191540:CDS 35.0%
GCATAACAATTAACCTCTCT+AGG + chr2_1:7144495-7144514 None:intergenic 35.0%
TCTTCCAAACAGTCTCAATA+GGG - chr2_1:7144566-7144585 Msa0191540:intron 35.0%
CTGGACAACAAACTTACATA+AGG + chr2_1:7144633-7144652 None:intergenic 35.0%
TCAATAAGCACTCATGTGAT+AGG + chr2_1:7144721-7144740 None:intergenic 35.0%
CAAACACTTGTGGAACTATT+TGG + chr2_1:7144901-7144920 None:intergenic 35.0%
CATGACAAACAGTCACATAA+CGG + chr2_1:7144961-7144980 None:intergenic 35.0%
GTTTGTCATGTGCTTATGAA+TGG - chr2_1:7144971-7144990 Msa0191540:intron 35.0%
AATCATACGACTTACCAACA+AGG + chr2_1:7145200-7145219 None:intergenic 35.0%
AAATACCCAATAACCATGCT+CGG + chr2_1:7145271-7145290 None:intergenic 35.0%
ATACAGTGAGATCAAAAGCA+TGG + chr2_1:7145309-7145328 None:intergenic 35.0%
! TCACTGTATAGTTTTCTTCC+TGG - chr2_1:7145320-7145339 Msa0191540:CDS 35.0%
! CACTGTATAGTTTTCTTCCT+GGG - chr2_1:7145321-7145340 Msa0191540:CDS 35.0%
ATTCAGATAGCTAAGTACCT+AGG - chr2_1:7145444-7145463 Msa0191540:intron 35.0%
!! TCAAGAGTATTTGTTACTGC+AGG - chr2_1:7145468-7145487 Msa0191540:intron 35.0%
CGTATGTTTAGACATGAAAC+TGG - chr2_1:7145533-7145552 Msa0191540:CDS 35.0%
! AATTTTCTGCAAACTTCGCT+TGG + chr2_1:7145590-7145609 None:intergenic 35.0%
!! CTAGCTTTTTGCAAGAGTAT+TGG - chr2_1:7145646-7145665 Msa0191540:intron 35.0%
ATATAATGTTGCGGAATGCT+TGG + chr2_1:7145772-7145791 None:intergenic 35.0%
TAATGTTATCATTGACGTGG+TGG - chr2_1:7145853-7145872 Msa0191540:intron 35.0%
!! TTTATTATCGGCTTTCAAGG+GGG - chr2_1:7145959-7145978 Msa0191540:intron 35.0%
!!! GTACAAGGTATTGCAGATTT+TGG - chr2_1:7146031-7146050 Msa0191540:CDS 35.0%
GAGTGAGTATCTACTAGAAA+AGG + chr2_1:7146064-7146083 None:intergenic 35.0%
CATGCAGAAAACTAAACTTG+AGG + chr2_1:7146089-7146108 None:intergenic 35.0%
! GTCATGTTTTCACTTGTACA+GGG + chr2_1:7146121-7146140 None:intergenic 35.0%
! AGTCATGTTTTCACTTGTAC+AGG + chr2_1:7146122-7146141 None:intergenic 35.0%
AAATTTCACTTAAGGTTGGG+TGG - chr2_1:7146230-7146249 Msa0191540:intron 35.0%
AGAAGAGATAAGGTGATTTG+CGG + chr2_1:7146725-7146744 None:intergenic 35.0%
ATGTGTCTACAGAAGAGATA+AGG + chr2_1:7146735-7146754 None:intergenic 35.0%
AGAACTTCCCATTTCAATAG+TGG + chr2_1:7146834-7146853 None:intergenic 35.0%
! GGGAAGTTCTTTTATTAGTG+TGG - chr2_1:7146844-7146863 Msa0191540:CDS 35.0%
!!! ACGATCACAGCTTTATTTTC+AGG + chr2_1:7146944-7146963 None:intergenic 35.0%
! TTGACCTCAGTGTTGAATAA+AGG - chr2_1:7147190-7147209 Msa0191540:intron 35.0%
! TCTTCTGCTTTGGTTTATCT+TGG - chr2_1:7147281-7147300 Msa0191540:intron 35.0%
CTTTCACTACTTGAATGCTT+TGG - chr2_1:7147316-7147335 Msa0191540:intron 35.0%
TGAGTGAGAGTAAATGAAAG+TGG - chr2_1:7147347-7147366 Msa0191540:intron 35.0%
CAGTCACAGATAAAGCTAAA+AGG - chr2_1:7147503-7147522 Msa0191540:intron 35.0%
! ATCCGTCACAAATGTCATTT+GGG + chr2_1:7147563-7147582 None:intergenic 35.0%
AATCCGTCACAAATGTCATT+TGG + chr2_1:7147564-7147583 None:intergenic 35.0%
! TTCTGTGATTTTCGGTTCTT+AGG + chr2_1:7147598-7147617 None:intergenic 35.0%
!! ATTTCCTTTGAGATTGAAGG+AGG - chr2_1:7147622-7147641 Msa0191540:intron 35.0%
TCATAGTTGTGTTCATGGTT+TGG - chr2_1:7147690-7147709 Msa0191540:intron 35.0%
ACCACATACTACATACTTCT+AGG - chr2_1:7147756-7147775 Msa0191540:intron 35.0%
CCACATACTACATACTTCTA+GGG - chr2_1:7147757-7147776 Msa0191540:intron 35.0%
AATTAGGGGAACCAAGAAAA+CGG + chr2_1:7147923-7147942 None:intergenic 35.0%
GGTTAGTACAATGTTGAAAG+TGG + chr2_1:7148017-7148036 None:intergenic 35.0%
AAGCATGTACTACTTTGTAG+TGG - chr2_1:7148116-7148135 Msa0191540:intron 35.0%
AGCATGTACTACTTTGTAGT+GGG - chr2_1:7148117-7148136 Msa0191540:intron 35.0%
TGTGTTTGGATTGAAGGTTT+AGG - chr2_1:7148336-7148355 Msa0191540:intron 35.0%
TTTGGATTGAAGGTTTAGGA+TGG - chr2_1:7148340-7148359 Msa0191540:intron 35.0%
! TTGGATTGAAGGTTTAGGAT+GGG - chr2_1:7148341-7148360 Msa0191540:intron 35.0%
CTAATAGTGTGTTTGGATTG+AGG + chr2_1:7148563-7148582 None:intergenic 35.0%
TTCCTAAAAGAACCACTTAG+TGG - chr2_1:7148656-7148675 Msa0191540:intron 35.0%
TCCTAAAAGAACCACTTAGT+GGG - chr2_1:7148657-7148676 Msa0191540:intron 35.0%
ATTACATACTTCCCACTAAG+TGG + chr2_1:7148671-7148690 None:intergenic 35.0%
!!! TTTTTTTTGTGTCAACCCTC+CGG - chr2_1:7148690-7148709 Msa0191540:intron 35.0%
!! GTTTGGTTTGAGAATAAGAG+AGG - chr2_1:7148834-7148853 Msa0191540:intron 35.0%
TTCAAATAAGTGAGAGTGAG+AGG - chr2_1:7148950-7148969 Msa0191540:intron 35.0%
TCAAATAAGTGAGAGTGAGA+GGG - chr2_1:7148951-7148970 Msa0191540:intron 35.0%
TCAGAACATATAAGCGATGT+GGG + chr2_1:7149040-7149059 None:intergenic 35.0%
TATAGCCTAGATGGACAATT+TGG - chr2_1:7149074-7149093 Msa0191540:intron 35.0%
ACACCGCAAACACAATAATA+TGG + chr2_1:7149397-7149416 None:intergenic 35.0%
! ATTGTGTTTGCGGTGTTAAA+TGG - chr2_1:7149401-7149420 Msa0191540:intron 35.0%
CATTGATCAGAAAAGTTGTG+AGG + chr2_1:7149461-7149480 None:intergenic 35.0%
TTTCTGATCAATGATCACAG+AGG - chr2_1:7149468-7149487 Msa0191540:intron 35.0%
TTCTGATCAATGATCACAGA+GGG - chr2_1:7149469-7149488 Msa0191540:intron 35.0%
!!! TCTTGTTTTTCCATCAAGGA+AGG - chr2_1:7149549-7149568 Msa0191540:intron 35.0%
!! CTTGTTTTTCCATCAAGGAA+GGG - chr2_1:7149550-7149569 Msa0191540:intron 35.0%
!! CATGTTACTTCTAGCTTCAA+TGG + chr2_1:7149669-7149688 None:intergenic 35.0%
CAAAAAACATCTTCTGTGCT+AGG - chr2_1:7149689-7149708 Msa0191540:intron 35.0%
! TTTGGTTCAAGTATGACGTA+GGG - chr2_1:7149786-7149805 Msa0191540:intron 35.0%
AAAGTAGCAAATGTGCCAAA+GGG + chr2_1:7149857-7149876 None:intergenic 35.0%
TATACCTGCAGCTATAACAA+GGG + chr2_1:7149909-7149928 None:intergenic 35.0%
TTGTTATAGCTGCAGGTATA+CGG - chr2_1:7149909-7149928 Msa0191540:intron 35.0%
CTTGCTGATCATTGATATCA+TGG + chr2_1:7150117-7150136 None:intergenic 35.0%
TGACTTATAAGGGTAATCTG+CGG + chr2_1:7150183-7150202 None:intergenic 35.0%
CCCTTATAAGTCAAATGAGA+TGG - chr2_1:7150190-7150209 Msa0191540:intron 35.0%
! GCCATCTCATTTGACTTATA+AGG + chr2_1:7150194-7150213 None:intergenic 35.0%
ATAAGTCAAATGAGATGGCT+AGG - chr2_1:7150195-7150214 Msa0191540:intron 35.0%
GTTCTCTTCATACTGTAACA+CGG - chr2_1:7150282-7150301 Msa0191540:intron 35.0%
ATTGGTTGCTAGCTATGTAT+CGG + chr2_1:7150315-7150334 None:intergenic 35.0%
ATAAATTTCAGGAGGCAACA+GGG + chr2_1:7150576-7150595 None:intergenic 35.0%
AGGCAGATAATATGGTAAGT+TGG + chr2_1:7150608-7150627 None:intergenic 35.0%
!! GCATTCTAAGGCAGATAATA+TGG + chr2_1:7150616-7150635 None:intergenic 35.0%
ATAGATTACACAGTTGGACT+TGG + chr2_1:7150678-7150697 None:intergenic 35.0%
AGGTCAATAGATTACACAGT+TGG + chr2_1:7150684-7150703 None:intergenic 35.0%
CTATTGACCTTTCATTCACA+AGG - chr2_1:7150694-7150713 Msa0191540:intron 35.0%
CCACTACTCATAAAACGTAA+TGG + chr2_1:7150759-7150778 None:intergenic 35.0%
! CCATTACGTTTTATGAGTAG+TGG - chr2_1:7150756-7150775 Msa0191540:intron 35.0%
! TTACGTTTTATGAGTAGTGG+AGG - chr2_1:7150759-7150778 Msa0191540:intron 35.0%
GTTAAGTCATTGCAACAACA+TGG - chr2_1:7150846-7150865 Msa0191540:intron 35.0%
TTACTAGACAAGTGAATCCT+TGG + chr2_1:7151003-7151022 None:intergenic 35.0%
CAAAGTTTGAACAACTCAAC+TGG + chr2_1:7151050-7151069 None:intergenic 35.0%
GTTTCACCCATTCTCAATAA+AGG - chr2_1:7151139-7151158 Msa0191540:intron 35.0%
! CCTTTTCCCTTTATTGAGAA+TGG + chr2_1:7151149-7151168 None:intergenic 35.0%
CCATTCTCAATAAAGGGAAA+AGG - chr2_1:7151146-7151165 Msa0191540:intron 35.0%
CATATTACTTCTCGCTTCAA+TGG + chr2_1:7151263-7151282 None:intergenic 35.0%
AAGAAAACATCTTCTGTGCA+AGG - chr2_1:7151284-7151303 Msa0191540:intron 35.0%
! GTTGGTTCAAGTATGACATA+GGG - chr2_1:7151381-7151400 Msa0191540:intron 35.0%
AAAGTAGCAAACGTGTCAAA+GGG + chr2_1:7151452-7151471 None:intergenic 35.0%
AAAAGTAGCAAACGTGTCAA+AGG + chr2_1:7151453-7151472 None:intergenic 35.0%
!!! TTGCTACTTTTGATGATGTC+TGG - chr2_1:7151462-7151481 Msa0191540:intron 35.0%
TTTACCTGTAGCTATTAGAC+GGG + chr2_1:7151504-7151523 None:intergenic 35.0%
GTCTAATAGCTACAGGTAAA+TGG - chr2_1:7151504-7151523 Msa0191540:intron 35.0%
! AGTAAGCCAATGACTTTTGA+TGG - chr2_1:7151599-7151618 Msa0191540:intron 35.0%
TCACAACCATCAAAAGTCAT+TGG + chr2_1:7151608-7151627 None:intergenic 35.0%
TGTTAGTCCAGTATGCATAA+TGG + chr2_1:7152061-7152080 None:intergenic 35.0%
! CTTTATCAGTCACTAGGTTT+TGG + chr2_1:7152533-7152552 None:intergenic 35.0%
!! TCTTAGCTTTATCAGTCACT+AGG + chr2_1:7152539-7152558 None:intergenic 35.0%
AGTGACTGATAAAGCTAAGA+AGG - chr2_1:7152539-7152558 Msa0191540:intron 35.0%
ATCGTAAAGCACACGAAAAA+TGG + chr2_1:7152594-7152613 None:intergenic 35.0%
AAGGGAAGTCTGAAAACAAA+GGG + chr2_1:7153058-7153077 None:intergenic 35.0%
TAAGGGAAGTCTGAAAACAA+AGG + chr2_1:7153059-7153078 None:intergenic 35.0%
ATCATGCAATTGGGTTTGTA+AGG + chr2_1:7153127-7153146 None:intergenic 35.0%
GAAAATGGGTCAGTTATTCT+GGG + chr2_1:7153197-7153216 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+TGG + chr2_1:7153198-7153217 None:intergenic 35.0%
TATGGTTGAAAGTGATGAGT+TGG - chr2_1:7153522-7153541 Msa0191540:intron 35.0%
ATGGTTGAAAGTGATGAGTT+GGG - chr2_1:7153523-7153542 Msa0191540:intron 35.0%
TGAAGTTTAGGGATCACTAA+CGG - chr2_1:7153707-7153726 Msa0191540:five_prime_UTR 35.0%
! AGTTATCAACTTTTCCGAAC+CGG - chr2_1:7153809-7153828 Msa0191540:five_prime_UTR 35.0%
ACTTATTTATTGTCCCGGTT+CGG + chr2_1:7153826-7153845 None:intergenic 35.0%
TATACAGAGAAGAGAAGTGA+AGG - chr2_1:7153880-7153899 Msa0191540:five_prime_UTR 35.0%
TCTTGAAGTTGTAGAACTTC+AGG + chr2_1:7153958-7153977 None:intergenic 35.0%
TGAAGTTCTACAACTTCAAG+AGG - chr2_1:7153957-7153976 Msa0191540:five_prime_UTR 35.0%
!! CTTCATTGTCTTTAGGTTGA+GGG + chr2_1:7153990-7154009 None:intergenic 35.0%
!! ACTTCATTGTCTTTAGGTTG+AGG + chr2_1:7153991-7154010 None:intergenic 35.0%
GTAAAAGCCTTTCCTTTGAA+CGG + chr2_1:7154055-7154074 None:intergenic 35.0%
GTTGGAAACGTTTATACCAA+CGG + chr2_1:7154136-7154155 None:intergenic 35.0%
TTGGTATAAACGTTTCCAAC+TGG - chr2_1:7154136-7154155 Msa0191540:intron 35.0%
AACGTTTCCAACTGGAAAAT+CGG - chr2_1:7154144-7154163 Msa0191540:intron 35.0%
TCATAAAGCTGTTTGGACTT+TGG + chr2_1:7154627-7154646 None:intergenic 35.0%
AACACACTCATAAAGCTGTT+TGG + chr2_1:7154634-7154653 None:intergenic 35.0%
ATATTATGATACGAGGTGTG+TGG - chr2_1:7154673-7154692 Msa0191540:intron 35.0%
TCTTTGCAAGCATGGTTATT+GGG - chr2_1:7154939-7154958 Msa0191540:five_prime_UTR 35.0%
TCACTGTATAACTATCTTCC+TGG - chr2_1:7154996-7155015 Msa0191540:five_prime_UTR 35.0%
TTCATCAATTCTCAGGTTCA+TGG - chr2_1:7155069-7155088 Msa0191540:intron 35.0%
!! TCAAGAGTATTTGTTACTGC+AGG - chr2_1:7145468-7145487 Msa0191540:intron 35.0%
GACTTCAACAACATGAAAAG+CGG + chr2_1:7155177-7155196 None:intergenic 35.0%
ACTACCTGCTAAGAAATATC+TGG + chr2_1:7155286-7155305 None:intergenic 35.0%
!! CTAGCTTTTTGCAAGAGTAT+TGG - chr2_1:7145646-7145665 Msa0191540:intron 35.0%
TTACAAAACAGAGGACTTTG+TGG - chr2_1:7145687-7145706 Msa0191540:intron 35.0%
!! TTTATTATCGGCTTTCAAGG+GGG - chr2_1:7145959-7145978 Msa0191540:intron 35.0%
! GTAGATCTACGTGCTTTATT+TGG - chr2_1:7155664-7155683 Msa0191540:intron 35.0%
TGTACAAGGTAATGCAGATT+CGG - chr2_1:7155699-7155718 Msa0191540:five_prime_UTR 35.0%
GCAGAAAACTAAACTTGAAG+AGG + chr2_1:7155764-7155783 None:intergenic 35.0%
CGTGAAAGTTGTCATTCTAT+AGG + chr2_1:7156332-7156351 None:intergenic 35.0%
CTTTCACGAACTGTTATACT+CGG - chr2_1:7156344-7156363 Msa0191540:intron 35.0%
CATTTCAATTGTGGAAAAGC+TGG + chr2_1:7156548-7156567 None:intergenic 35.0%
! CAGCTTTTCCACAATTGAAA+TGG - chr2_1:7156546-7156565 Msa0191540:intron 35.0%
AGAACTTCCCATTTCAATTG+TGG + chr2_1:7156557-7156576 None:intergenic 35.0%
!!! ACGATCACAGCTTTATTTTC+AGG + chr2_1:7146944-7146963 None:intergenic 35.0%
CTGAAGTAGAGAAGAATGTT+TGG - chr2_1:7156690-7156709 Msa0191540:intron 35.0%
! TGGAAAGATATTGCTTGTTG+TGG - chr2_1:7156814-7156833 Msa0191540:five_prime_UTR 35.0%
AGAGAAGAGAAGGAAAGTTG+TGG - chr2_1:7143801-7143820 Msa0191540:three_prime_UTR 40.0%
TCTTGGAGTTGAAGAACTTC+AGG + chr2_1:7143879-7143898 None:intergenic 40.0%
TGAAGTTCTTCAACTCCAAG+AGG - chr2_1:7143878-7143897 Msa0191540:three_prime_UTR 40.0%
!! AAGGGTATCAGCTCTGTTAA+GGG + chr2_1:7143958-7143977 None:intergenic 40.0%
AACATTCAAGTCCTGGATAG+GGG + chr2_1:7144019-7144038 None:intergenic 40.0%
GAACATTCAAGTCCTGGATA+GGG + chr2_1:7144020-7144039 None:intergenic 40.0%
AGAACATTCAAGTCCTGGAT+AGG + chr2_1:7144021-7144040 None:intergenic 40.0%
TATCCAGGACTTGAATGTTC+TGG - chr2_1:7144020-7144039 Msa0191540:three_prime_UTR 40.0%
ATTCCAGAACATTCAAGTCC+TGG + chr2_1:7144026-7144045 None:intergenic 40.0%
! TCTGGAATCATTGAATCCGT+TGG - chr2_1:7144038-7144057 Msa0191540:three_prime_UTR 40.0%
! CTTGGAAACGTTTTTGCCAA+CGG + chr2_1:7144057-7144076 None:intergenic 40.0%
TTGGCAAAAACGTTTCCAAG+TGG - chr2_1:7144057-7144076 Msa0191540:exon 40.0%
CGTTTCCAAGTGGAAAATTG+GGG - chr2_1:7144067-7144086 Msa0191540:CDS 40.0%
CTCTTCCAAACAGTCTCAAT+AGG - chr2_1:7144565-7144584 Msa0191540:intron 40.0%
AGTTCCACAAGTGTTTGTGT+TGG - chr2_1:7144904-7144923 Msa0191540:intron 40.0%
TCTACCAACACAAACACTTG+TGG + chr2_1:7144911-7144930 None:intergenic 40.0%
! TGAAAAAGTTGCTGTTGCTG+AGG - chr2_1:7145057-7145076 Msa0191540:intron 40.0%
! GAAAAAGTTGCTGTTGCTGA+GGG - chr2_1:7145058-7145077 Msa0191540:intron 40.0%
ATCTAAGGGAGAAACCTTGT+TGG - chr2_1:7145183-7145202 Msa0191540:intron 40.0%
TAATCTGTTCTTTCCGAGCA+TGG - chr2_1:7145255-7145274 Msa0191540:CDS 40.0%
TTCTTTCCGAGCATGGTTAT+TGG - chr2_1:7145262-7145281 Msa0191540:CDS 40.0%
TCTTTCCGAGCATGGTTATT+GGG - chr2_1:7145263-7145282 Msa0191540:CDS 40.0%
!! AAGAGTATTGGAGCTGATGT+TGG - chr2_1:7145658-7145677 Msa0191540:intron 40.0%
AAACAGAGGACTTTGTAGCA+AGG - chr2_1:7145692-7145711 Msa0191540:intron 40.0%
AACAGAGGACTTTGTAGCAA+GGG - chr2_1:7145693-7145712 Msa0191540:intron 40.0%
TTGGTTGCTTAGAGATGCAT+CGG - chr2_1:7145829-7145848 Msa0191540:intron 40.0%
GGGTAATGTTATCATTGACG+TGG - chr2_1:7145850-7145869 Msa0191540:intron 40.0%
! GTGGATCTACGTGCTTTATT+TGG - chr2_1:7145995-7146014 Msa0191540:intron 40.0%
GCAGAAAACTAAACTTGAGG+AGG + chr2_1:7146086-7146105 None:intergenic 40.0%
ACACTAACCACTGAGTAAAG+TGG - chr2_1:7146544-7146563 Msa0191540:intron 40.0%
CACTAACCACTGAGTAAAGT+GGG - chr2_1:7146545-7146564 Msa0191540:intron 40.0%
! GTGATTTGCGGATGAAATGT+GGG + chr2_1:7146713-7146732 None:intergenic 40.0%
CTGAAGTGGAGAAGAATGTT+TGG - chr2_1:7146966-7146985 Msa0191540:intron 40.0%
ATGGAAAGCAGTCAGCATAT+TGG - chr2_1:7147070-7147089 Msa0191540:intron 40.0%
CACACCTTTATTCAACACTG+AGG + chr2_1:7147197-7147216 None:intergenic 40.0%
! CTCAGTGTTGAATAAAGGTG+TGG - chr2_1:7147195-7147214 Msa0191540:intron 40.0%
! TCCGTCACAAATGTCATTTG+GGG + chr2_1:7147562-7147581 None:intergenic 40.0%
GATGCTCATAGTTGTGTTCA+TGG - chr2_1:7147685-7147704 Msa0191540:intron 40.0%
! TAGTTGTGTTCATGGTTTGG+TGG - chr2_1:7147693-7147712 Msa0191540:intron 40.0%
! CCCTAGAAGTATGTAGTATG+TGG + chr2_1:7147760-7147779 None:intergenic 40.0%
GCCGCATGGCTTAATTATAT+TGG + chr2_1:7147963-7147982 None:intergenic 40.0%
GCATGTACTACTTTGTAGTG+GGG - chr2_1:7148118-7148137 Msa0191540:intron 40.0%
CACCATTTACTACTTTCGAG+TGG - chr2_1:7148198-7148217 Msa0191540:intron 40.0%
GTCCACTCGAAAGTAGTAAA+TGG + chr2_1:7148203-7148222 None:intergenic 40.0%
!! GAGTGGACTGTGAAAAGAAA+AGG - chr2_1:7148215-7148234 Msa0191540:intron 40.0%
TGGAATTGCCTTCATAGTTG+AGG - chr2_1:7148286-7148305 Msa0191540:intron 40.0%
AGTTCGAACCTCAACTATGA+AGG + chr2_1:7148297-7148316 None:intergenic 40.0%
CACTATACTTCGTGTGTGTT+TGG - chr2_1:7148322-7148341 Msa0191540:intron 40.0%
TTCGTGTGTGTTTGGATTGA+AGG - chr2_1:7148330-7148349 Msa0191540:intron 40.0%
! AGGTTTAGGATGGGAAAGAA+AGG - chr2_1:7148350-7148369 Msa0191540:intron 40.0%
! GGTTTAGGATGGGAAAGAAA+GGG - chr2_1:7148351-7148370 Msa0191540:intron 40.0%
! TCCCACTAAGTGGTTCTTTT+AGG + chr2_1:7148661-7148680 None:intergenic 40.0%
AAGAGGTCTTTCCTGAAAAC+CGG + chr2_1:7148712-7148731 None:intergenic 40.0%
ACCATTTGAGCTCAGTTGTT+TGG - chr2_1:7148817-7148836 Msa0191540:intron 40.0%
ACCAAACAACTGAGCTCAAA+TGG + chr2_1:7148821-7148840 None:intergenic 40.0%
TGGATTGAGTACTTACTGTG+AGG - chr2_1:7148874-7148893 Msa0191540:intron 40.0%
GGATTGAGTACTTACTGTGA+GGG - chr2_1:7148875-7148894 Msa0191540:intron 40.0%
CTCAGAACATATAAGCGATG+TGG + chr2_1:7149041-7149060 None:intergenic 40.0%
CACATCGCTTATATGTTCTG+AGG - chr2_1:7149039-7149058 Msa0191540:intron 40.0%
ACAAGCCAAATTGTCCATCT+AGG + chr2_1:7149082-7149101 None:intergenic 40.0%
CGATACAGAGAAGATTAGCA+TGG - chr2_1:7149131-7149150 Msa0191540:intron 40.0%
TTTCCATCAAGGAAGGGAAA+AGG - chr2_1:7149556-7149575 Msa0191540:intron 40.0%
! TTTCCTTTTCCCTTCCTTGA+TGG + chr2_1:7149562-7149581 None:intergenic 40.0%
TTCCGATACGATCATCCAAT+GGG + chr2_1:7149728-7149747 None:intergenic 40.0%
ATTCCGATACGATCATCCAA+TGG + chr2_1:7149729-7149748 None:intergenic 40.0%
! GTTTGGTTCAAGTATGACGT+AGG - chr2_1:7149785-7149804 Msa0191540:intron 40.0%
GAAAGTAGCAAATGTGCCAA+AGG + chr2_1:7149858-7149877 None:intergenic 40.0%
!! TTGCTACTTTCGATGACGTT+TGG - chr2_1:7149867-7149886 Msa0191540:intron 40.0%
GTATACCTGCAGCTATAACA+AGG + chr2_1:7149910-7149929 None:intergenic 40.0%
GGTCTTTCATTCATTAGGTG+GGG + chr2_1:7150161-7150180 None:intergenic 40.0%
GGGTCTTTCATTCATTAGGT+GGG + chr2_1:7150162-7150181 None:intergenic 40.0%
GACTTATAAGGGTAATCTGC+GGG + chr2_1:7150182-7150201 None:intergenic 40.0%
CATAAATTTCAGGAGGCAAC+AGG + chr2_1:7150577-7150596 None:intergenic 40.0%
TTGACCTTTCATTCACAAGG+TGG - chr2_1:7150697-7150716 Msa0191540:intron 40.0%
TGACCTTTCATTCACAAGGT+GGG - chr2_1:7150698-7150717 Msa0191540:intron 40.0%
! TTCTAAGAACTGGGAGTCAA+GGG - chr2_1:7150783-7150802 Msa0191540:intron 40.0%
! GTCAGAAAGCGCAAAATTAG+TGG + chr2_1:7150812-7150831 None:intergenic 40.0%
AGACATGATTATCCAATGGG+TGG + chr2_1:7151320-7151339 None:intergenic 40.0%
CTCAGCAAGTCTTAAAACGA+AGG - chr2_1:7151359-7151378 Msa0191540:intron 40.0%
GCAAGTCTTAAAACGAAGGT+TGG - chr2_1:7151363-7151382 Msa0191540:intron 40.0%
! GGTTGGTTCAAGTATGACAT+AGG - chr2_1:7151380-7151399 Msa0191540:intron 40.0%
ATCCATGTTAGAGAGACATC+TGG + chr2_1:7151738-7151757 None:intergenic 40.0%
!! TAGACAAGCATTGACACATC+CGG - chr2_1:7151807-7151826 Msa0191540:intron 40.0%
TGAACCTGCATCAAGATTCA+AGG - chr2_1:7151946-7151965 Msa0191540:intron 40.0%
GAACCTGCATCAAGATTCAA+GGG - chr2_1:7151947-7151966 Msa0191540:intron 40.0%
TACTAGTAGTCATCATGACC+AGG - chr2_1:7151979-7151998 Msa0191540:intron 40.0%
CTACTACTACTACTATCTCC+TGG + chr2_1:7152000-7152019 None:intergenic 40.0%
CAGTTGTCCATTATGCATAC+TGG - chr2_1:7152051-7152070 Msa0191540:intron 40.0%
ACAAACAAAGCAAGAGACTG+TGG - chr2_1:7152081-7152100 Msa0191540:intron 40.0%
GAAAGGATGTGTCTACTCTT+TGG + chr2_1:7152187-7152206 None:intergenic 40.0%
TAGAAGTCCTGAATGTGTGT+TGG - chr2_1:7152487-7152506 Msa0191540:intron 40.0%
AGAAGTCCTGAATGTGTGTT+GGG - chr2_1:7152488-7152507 Msa0191540:intron 40.0%
! TTTTGACCCAACACACATTC+AGG + chr2_1:7152497-7152516 None:intergenic 40.0%
!!! GACAGGACTATTTTCTGGTT+TGG + chr2_1:7153013-7153032 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG - chr2_1:7153388-7153407 Msa0191540:intron 40.0%
! GTTATCAACTTTTCCGAACC+GGG - chr2_1:7153810-7153829 Msa0191540:five_prime_UTR 40.0%
GCAGTTGTAATTACAACACC+AGG - chr2_1:7153928-7153947 Msa0191540:five_prime_UTR 40.0%
GTTGTAATTACAACACCAGG+TGG - chr2_1:7153931-7153950 Msa0191540:five_prime_UTR 40.0%
AACATTCAAGACCTGGATAG+GGG + chr2_1:7154098-7154117 None:intergenic 40.0%
GAACATTCAAGACCTGGATA+GGG + chr2_1:7154099-7154118 None:intergenic 40.0%
AGAACATTCAAGACCTGGAT+AGG + chr2_1:7154100-7154119 None:intergenic 40.0%
TATCCAGGTCTTGAATGTTC+TGG - chr2_1:7154099-7154118 Msa0191540:intron 40.0%
! TCTGGAACTATTGAATCCGT+TGG - chr2_1:7154117-7154136 Msa0191540:intron 40.0%
ATATCATAAGCTCTGCCGAA+CGG - chr2_1:7154555-7154574 Msa0191540:intron 40.0%
AAGCTGTTTGGACTTTGGAT+TGG + chr2_1:7154622-7154641 None:intergenic 40.0%
TGAAAAAGTAGCAGTTCCTG+AGG - chr2_1:7154736-7154755 Msa0191540:intron 40.0%
GAAAAAGTAGCAGTTCCTGA+GGG - chr2_1:7154737-7154756 Msa0191540:intron 40.0%
! CGACGATTTTTATGACAAGC+CGG - chr2_1:7154837-7154856 Msa0191540:intron 40.0%
ATCTAAGGGGGAAACCTTAT+TGG - chr2_1:7154862-7154881 Msa0191540:five_prime_UTR 40.0%
TAGCATACTCTTTGCAAGCA+TGG - chr2_1:7154931-7154950 Msa0191540:five_prime_UTR 40.0%
CTCTTTGCAAGCATGGTTAT+TGG - chr2_1:7154938-7154957 Msa0191540:five_prime_UTR 40.0%
ATCAATTCTCAGGTTCATGG+AGG - chr2_1:7155072-7155091 Msa0191540:intron 40.0%
! ATTCAGATAGCTAAGTACCG+AGG - chr2_1:7155120-7155139 Msa0191540:intron 40.0%
CTTGAAATTCCAAGCGATGT+TGG - chr2_1:7155247-7155266 Msa0191540:five_prime_UTR 40.0%
AAATATCTGCCAACATCGCT+TGG + chr2_1:7155259-7155278 None:intergenic 40.0%
!! AAGAGTATTGGAGCTGATGT+TGG - chr2_1:7145658-7145677 Msa0191540:intron 40.0%
TGGTTGCTTAGAGTTGTGTT+AGG - chr2_1:7155499-7155518 Msa0191540:intron 40.0%
ATTATCATTGATGTGGTGGC+AGG - chr2_1:7155526-7155545 Msa0191540:intron 40.0%
GAAGACGCTTCAATGCAAAA+TGG + chr2_1:7156012-7156031 None:intergenic 40.0%
!! TTTTGCATTGAAGCGTCTTC+TGG - chr2_1:7156012-7156031 Msa0191540:intron 40.0%
TCTACTAAGGCGGACAAAAA+TGG + chr2_1:7156143-7156162 None:intergenic 40.0%
TTCATTTGACAGCACACTAC+AGG + chr2_1:7156221-7156240 None:intergenic 40.0%
! TGATTGTGGGTTATGTTCAG+CGG - chr2_1:7156622-7156641 Msa0191540:intron 40.0%
! GGGAATGATTTGTAAACCAC+AGG + chr2_1:7156743-7156762 None:intergenic 40.0%
ATGGAAAGCAGTCAGCATAT+TGG - chr2_1:7147070-7147089 Msa0191540:intron 40.0%
! TGAAGAACTTCAGGTTCACC+TGG + chr2_1:7143870-7143889 None:intergenic 45.0%
TTTGAGGGTCTTCAACCTCT+TGG + chr2_1:7143896-7143915 None:intergenic 45.0%
!! GAAGGGTATCAGCTCTGTTA+AGG + chr2_1:7143959-7143978 None:intergenic 45.0%
ATAAGCGCCTTTCCTCTGAA+GGG + chr2_1:7143976-7143995 None:intergenic 45.0%
! CTGATCCCCAATTTTCCACT+TGG + chr2_1:7144075-7144094 None:intergenic 45.0%
CAAGTGGAAAATTGGGGATC+AGG - chr2_1:7144073-7144092 Msa0191540:CDS 45.0%
TCCAAACAGTCTCAATAGGG+TGG - chr2_1:7144569-7144588 Msa0191540:intron 45.0%
ACCACCCTATTGAGACTGTT+TGG + chr2_1:7144573-7144592 None:intergenic 45.0%
AAGCTATCTTGGAGAGCTTC+TGG - chr2_1:7144789-7144808 Msa0191540:intron 45.0%
ACATGCAACCTCAGGAAAAC+TGG + chr2_1:7145128-7145147 None:intergenic 45.0%
TATGACAAGCCGGCTATCTA+AGG - chr2_1:7145168-7145187 Msa0191540:intron 45.0%
ATGACAAGCCGGCTATCTAA+GGG - chr2_1:7145169-7145188 Msa0191540:intron 45.0%
AGGTTTCTCCCTTAGATAGC+CGG + chr2_1:7145180-7145199 None:intergenic 45.0%
CAGATTCATGGAGGTTCAAG+TGG - chr2_1:7145405-7145424 Msa0191540:intron 45.0%
CATGGAGGTTCAAGTGGAAT+CGG - chr2_1:7145411-7145430 Msa0191540:intron 45.0%
GGACTTTGTAGCAAGGGTAA+AGG - chr2_1:7145699-7145718 Msa0191540:intron 45.0%
GCAAGGGTAAAGGAAGAAAC+TGG - chr2_1:7145709-7145728 Msa0191540:intron 45.0%
AGGGTAAAGGAAGAAACTGG+CGG - chr2_1:7145712-7145731 Msa0191540:intron 45.0%
TGGTTGCTTAGAGATGCATC+GGG - chr2_1:7145830-7145849 Msa0191540:intron 45.0%
ATTTGCATCGGAGCTTCTTC+TGG - chr2_1:7146337-7146356 Msa0191540:intron 45.0%
CTGCTGGAGTGGACAAAAAT+GGG + chr2_1:7146438-7146457 None:intergenic 45.0%
TCTGCTGGAGTGGACAAAAA+TGG + chr2_1:7146439-7146458 None:intergenic 45.0%
CAATGTTGCGAAATGTCTGC+TGG + chr2_1:7146454-7146473 None:intergenic 45.0%
GATAGCACACTCCAGTAACA+GGG + chr2_1:7146512-7146531 None:intergenic 45.0%
TGATAGCACACTCCAGTAAC+AGG + chr2_1:7146513-7146532 None:intergenic 45.0%
AAGTGACCCACTTTACTCAG+TGG + chr2_1:7146554-7146573 None:intergenic 45.0%
! GGTGATTTGCGGATGAAATG+TGG + chr2_1:7146714-7146733 None:intergenic 45.0%
! CAACTGTGGGTTATGTTCAG+CGG - chr2_1:7146898-7146917 Msa0191540:CDS 45.0%
ACCTTACCTTCTGCAATTGC+AGG + chr2_1:7146992-7147011 None:intergenic 45.0%
AGAAGGTAAGGTTAAGCCTG+TGG - chr2_1:7147000-7147019 Msa0191540:intron 45.0%
GGGAAAGATTTGTAGACCAC+AGG + chr2_1:7147019-7147038 None:intergenic 45.0%
! TACGCGACACAACACACTTT+TGG - chr2_1:7147140-7147159 Msa0191540:intron 45.0%
CACTGAGGTCAAAACACACA+AGG + chr2_1:7147182-7147201 None:intergenic 45.0%
GCCCCAAATGACATTTGTGA+CGG - chr2_1:7147558-7147577 Msa0191540:intron 45.0%
AGCTCCTCCTTCAATCTCAA+AGG + chr2_1:7147629-7147648 None:intergenic 45.0%
TGGAAATGACCACCAAGCTA+GGG - chr2_1:7147663-7147682 Msa0191540:intron 45.0%
AACTATGAGCATCCCTAGCT+TGG + chr2_1:7147678-7147697 None:intergenic 45.0%
TGTCAGAATATTAGGCCGCA+TGG + chr2_1:7147977-7147996 None:intergenic 45.0%
! TACTACTTTGTAGTGGGGTG+AGG - chr2_1:7148123-7148142 Msa0191540:intron 45.0%
TACGAGGAGAAAGGAAGGAA+GGG + chr2_1:7148537-7148556 None:intergenic 45.0%
TTACGAGGAGAAAGGAAGGA+AGG + chr2_1:7148538-7148557 None:intergenic 45.0%
TTGAGGGTTTACGAGGAGAA+AGG + chr2_1:7148546-7148565 None:intergenic 45.0%
GTTTGGATTGAGGGTTTACG+AGG + chr2_1:7148553-7148572 None:intergenic 45.0%
GGTTTGAGAATAAGAGAGGG+AGG - chr2_1:7148838-7148857 Msa0191540:intron 45.0%
AGGGAGGAAGTTTGCATGTA+TGG - chr2_1:7148854-7148873 Msa0191540:intron 45.0%
!! GACAATTTGGCTTGTCCCTT+CGG - chr2_1:7149087-7149106 Msa0191540:intron 45.0%
!! ACAATTTGGCTTGTCCCTTC+GGG - chr2_1:7149088-7149107 Msa0191540:intron 45.0%
! TTTTATCGGATGTCCCCGAA+GGG + chr2_1:7149105-7149124 None:intergenic 45.0%
! ATTTTATCGGATGTCCCCGA+AGG + chr2_1:7149106-7149125 None:intergenic 45.0%
TCGGGGACATCCGATAAAAT+TGG - chr2_1:7149106-7149125 Msa0191540:intron 45.0%
GACACGCACAAATCGAGAAA+TGG - chr2_1:7149169-7149188 Msa0191540:intron 45.0%
TTGTGAGGCCTCTACCTTTA+AGG + chr2_1:7149446-7149465 None:intergenic 45.0%
! GCTAAGCTAGGACTAGTACT+TGG - chr2_1:7149494-7149513 Msa0191540:intron 45.0%
CTTCTGTGCTAGGAATTGTG+AGG - chr2_1:7149699-7149718 Msa0191540:intron 45.0%
CACCCATTGGATGATCGTAT+CGG - chr2_1:7149723-7149742 Msa0191540:intron 45.0%
! ATACTTGCTGAGTCGTTCAG+AGG + chr2_1:7149756-7149775 None:intergenic 45.0%
ACGTTGGAGAGGAAATGAAG+CGG + chr2_1:7149820-7149839 None:intergenic 45.0%
TACACCGCAAGATATCCCTT+TGG - chr2_1:7149839-7149858 Msa0191540:intron 45.0%
TGTGCCAAAGGGATATCTTG+CGG + chr2_1:7149846-7149865 None:intergenic 45.0%
CGGGTCTTTCATTCATTAGG+TGG + chr2_1:7150163-7150182 None:intergenic 45.0%
CTGCGGGTCTTTCATTCATT+AGG + chr2_1:7150166-7150185 None:intergenic 45.0%
CACACTAATGACCAATCCCT+CGG - chr2_1:7150542-7150561 Msa0191540:intron 45.0%
CAACAGGGAATCTATACCGA+GGG + chr2_1:7150561-7150580 None:intergenic 45.0%
GACCTTTCATTCACAAGGTG+GGG - chr2_1:7150699-7150718 Msa0191540:intron 45.0%
TACCCCACCTTGTGAATGAA+AGG + chr2_1:7150704-7150723 None:intergenic 45.0%
! TAGTGGAGGCTTCTAAGAAC+TGG - chr2_1:7150773-7150792 Msa0191540:intron 45.0%
! AGTGGAGGCTTCTAAGAACT+GGG - chr2_1:7150774-7150793 Msa0191540:intron 45.0%
! CTTCTAAGAACTGGGAGTCA+AGG - chr2_1:7150782-7150801 Msa0191540:intron 45.0%
!! AGACTTGCTGAGTCAAGCAA+AGG + chr2_1:7151351-7151370 None:intergenic 45.0%
ACGTTGGAGAGGAAATGAAG+CGG + chr2_1:7149820-7149839 None:intergenic 45.0%
GGATATCTTGCAGTGTACGT+TGG + chr2_1:7151431-7151450 None:intergenic 45.0%
CCATGTGATCTCTCATCTCA+AGG + chr2_1:7151707-7151726 None:intergenic 45.0%
CCTTGAGATGAGAGATCACA+TGG - chr2_1:7151704-7151723 Msa0191540:intron 45.0%
CTCCAGATGTCTCTCTAACA+TGG - chr2_1:7151733-7151752 Msa0191540:intron 45.0%
ATGCCCTTGAATCTTGATGC+AGG + chr2_1:7151953-7151972 None:intergenic 45.0%
TGCATCAAGATTCAAGGGCA+TGG - chr2_1:7151952-7151971 Msa0191540:intron 45.0%
TTGGAGAGACAAAGCGATGT+GGG + chr2_1:7152264-7152283 None:intergenic 45.0%
TGCAATTGGGTTTGTAAGGC+AGG + chr2_1:7153123-7153142 None:intergenic 45.0%
!! GGAGGGAGTATCATGCAATT+GGG + chr2_1:7153172-7153191 None:intergenic 45.0%
! ATGGGTCAGTTATTCTGGGA+CGG + chr2_1:7153193-7153212 None:intergenic 45.0%
!! AACGGTATCGGCACTGTTAA+GGG + chr2_1:7154037-7154056 None:intergenic 45.0%
GCCTTTCCTTTGAACGGTAT+CGG + chr2_1:7154049-7154068 None:intergenic 45.0%
GTTCCAGAACATTCAAGACC+TGG + chr2_1:7154105-7154124 None:intergenic 45.0%
! CTGATCTCCGATTTTCCAGT+TGG + chr2_1:7154154-7154173 None:intergenic 45.0%
CAACTGGAAAATCGGAGATC+AGG - chr2_1:7154152-7154171 Msa0191540:intron 45.0%
TGCATCCTTCAGAGAAATCC+CGG + chr2_1:7145104-7145123 None:intergenic 45.0%
!!! GGATGCAGCTAGTTTTACTG+AGG - chr2_1:7154796-7154815 Msa0191540:intron 45.0%
TATGACAAGCCGGCTATCTA+AGG - chr2_1:7145168-7145187 Msa0191540:intron 45.0%
ATGACAAGCCGGCTATCTAA+GGG - chr2_1:7145169-7145188 Msa0191540:intron 45.0%
CATGGAGGTTCAAGTGGAAT+CGG - chr2_1:7145411-7145430 Msa0191540:intron 45.0%
AAACAGAGGACTTTGTGGCA+AGG - chr2_1:7155361-7155380 Msa0191540:intron 45.0%
AACAGAGGACTTTGTGGCAA+GGG - chr2_1:7155362-7155381 Msa0191540:intron 45.0%
GCAAGGGTAAAGGAAGAAAC+TGG - chr2_1:7145709-7145728 Msa0191540:intron 45.0%
AGGGTAAAGGAAGAAACTGG+CGG - chr2_1:7145712-7145731 Msa0191540:intron 45.0%
GTCCACAATAGCTTACTGTG+TGG - chr2_1:7156304-7156323 Msa0191540:intron 45.0%
TGCCACACAGTAAGCTATTG+TGG + chr2_1:7156309-7156328 None:intergenic 45.0%
ACCTTTCCTTCTGCAATTGC+AGG + chr2_1:7156716-7156735 None:intergenic 45.0%
AGAAGGAAAGGTTAAGCCTG+TGG - chr2_1:7156724-7156743 Msa0191540:intron 45.0%
!! ATTCCCTCTTTCTGAAGCTG+CGG - chr2_1:7156757-7156776 Msa0191540:intron 45.0%
TTGTTGTGGCATGAAAACCG+TGG - chr2_1:7156828-7156847 Msa0191540:five_prime_UTR 45.0%
TTGGCAGCAAATTGAGTGAG+AGG - chr2_1:7157043-7157062 Msa0191540:five_prime_UTR 45.0%
!! AAAAAATAATTACTATTTAA+GGG + chr2_1:7153076-7153095 None:intergenic 5.0%
!! TAAAAAATAATTACTATTTA+AGG + chr2_1:7153077-7153096 None:intergenic 5.0%
!! ATATAATATAAACATAATAT+AGG + chr2_1:7153501-7153520 None:intergenic 5.0%
!! TTATGTTTATATTATATATA+TGG - chr2_1:7153504-7153523 Msa0191540:intron 5.0%
CAGTGGCGTGAACTTTGATG+AGG + chr2_1:7143935-7143954 None:intergenic 50.0%
ATCAGCTCTGTTAAGGGCAG+TGG + chr2_1:7143952-7143971 None:intergenic 50.0%
ACAGAGCTGATACCCTTCAG+AGG - chr2_1:7143961-7143980 Msa0191540:three_prime_UTR 50.0%
GCTGATACCCTTCAGAGGAA+AGG - chr2_1:7143966-7143985 Msa0191540:three_prime_UTR 50.0%
GATAAGCGCCTTTCCTCTGA+AGG + chr2_1:7143977-7143996 None:intergenic 50.0%
ACAGTCACATAACGGCTGCT+TGG + chr2_1:7144953-7144972 None:intergenic 50.0%
TATGAGGTGTGTGGCTTCAC+AGG - chr2_1:7145003-7145022 Msa0191540:intron 50.0%
CAGGTATGTGCTCTTCTAGC+TGG - chr2_1:7145022-7145041 Msa0191540:intron 50.0%
! GTATGTGCTCTTCTAGCTGG+AGG - chr2_1:7145025-7145044 Msa0191540:intron 50.0%
TGCTGAGGGACAAGTTCTTC+CGG - chr2_1:7145072-7145091 Msa0191540:intron 50.0%
AAGTTCTTCCGGTTCCACCT+GGG - chr2_1:7145083-7145102 Msa0191540:intron 50.0%
AGAGAAATCCCAGGTGGAAC+CGG + chr2_1:7145094-7145113 None:intergenic 50.0%
TCCACCTGGGATTTCTCTGA+AGG - chr2_1:7145096-7145115 Msa0191540:intron 50.0%
TCCTTCAGAGAAATCCCAGG+TGG + chr2_1:7145100-7145119 None:intergenic 50.0%
GCATCCTTCAGAGAAATCCC+AGG + chr2_1:7145103-7145122 None:intergenic 50.0%
CACACAGTACATGCAACCTC+AGG + chr2_1:7145136-7145155 None:intergenic 50.0%
CTGAGGTTGCATGTACTGTG+TGG - chr2_1:7145134-7145153 Msa0191540:intron 50.0%
! AAGGAAGAAACTGGCGGACA+AGG - chr2_1:7145718-7145737 Msa0191540:intron 50.0%
GTTATCATTGACGTGGTGGC+AGG - chr2_1:7145857-7145876 Msa0191540:intron 50.0%
!! TCAAGGGGGTGTTTCTACAG+AGG - chr2_1:7145973-7145992 Msa0191540:intron 50.0%
TTGCGAAATGTCTGCTGGAG+TGG + chr2_1:7146449-7146468 None:intergenic 50.0%
GACGTGTCTACTGTCTACTC+TGG + chr2_1:7146630-7146649 None:intergenic 50.0%
AGCTGTGATCGTTGCTGAAG+TGG - chr2_1:7146952-7146971 Msa0191540:CDS 50.0%
GTTTGGCCTGCAATTGCAGA+AGG - chr2_1:7146983-7147002 Msa0191540:intron 50.0%
GCCTGCAATTGCAGAAGGTA+AGG - chr2_1:7146988-7147007 Msa0191540:intron 50.0%
!! TTTCCCCCTTTCTGAAGCTG+CGG - chr2_1:7147033-7147052 Msa0191540:intron 50.0%
GCTGACTGCTTTCCATAAGC+CGG + chr2_1:7147066-7147085 None:intergenic 50.0%
! GTCATTTGGGGCAAGTGATG+AGG + chr2_1:7147550-7147569 None:intergenic 50.0%
GGTGGTCATTTCCACTTTGC+AGG + chr2_1:7147657-7147676 None:intergenic 50.0%
GTGGAAATGACCACCAAGCT+AGG - chr2_1:7147662-7147681 Msa0191540:intron 50.0%
TATGAGCATCCCTAGCTTGG+TGG + chr2_1:7147675-7147694 None:intergenic 50.0%
GGGTTTACGAGGAGAAAGGA+AGG + chr2_1:7148542-7148561 None:intergenic 50.0%
GGTCTTTCCTGAAAACCGGA+GGG + chr2_1:7148708-7148727 None:intergenic 50.0%
AGGTCTTTCCTGAAAACCGG+AGG + chr2_1:7148709-7148728 None:intergenic 50.0%
!! CAATTTGGCTTGTCCCTTCG+GGG - chr2_1:7149089-7149108 Msa0191540:intron 50.0%
! TTGCGGTGTTAAATGGCCTC+AGG - chr2_1:7149408-7149427 Msa0191540:intron 50.0%
TCACAGAGGGAAGCTAAGCT+AGG - chr2_1:7149482-7149501 Msa0191540:intron 50.0%
CGATACGATCATCCAATGGG+TGG + chr2_1:7149725-7149744 None:intergenic 50.0%
GGATATCTTGCGGTGTACGT+TGG + chr2_1:7149836-7149855 None:intergenic 50.0%
!! CGAGGGATTGGTCATTAGTG+TGG + chr2_1:7150544-7150563 None:intergenic 50.0%
GGGAATCTATACCGAGGGAT+TGG + chr2_1:7150556-7150575 None:intergenic 50.0%
GCAACAGGGAATCTATACCG+AGG + chr2_1:7150562-7150581 None:intergenic 50.0%
GGAATTGTGAAGCCACCCAT+TGG - chr2_1:7151305-7151324 Msa0191540:intron 50.0%
TCTTGCAGTGTACGTTGGAG+AGG + chr2_1:7151426-7151445 None:intergenic 50.0%
GAAGCCCGTCTAATAGCTAC+AGG - chr2_1:7151497-7151516 Msa0191540:intron 50.0%
GGATGTGTCTACTCTTTGGC+AGG + chr2_1:7152183-7152202 None:intergenic 50.0%
GTTGGAGAGACAAAGCGATG+TGG + chr2_1:7152265-7152284 None:intergenic 50.0%
!! CGGAGGGAGTATCATGCAAT+TGG + chr2_1:7153173-7153192 None:intergenic 50.0%
!! GTCAGTTATTCTGGGACGGA+GGG + chr2_1:7153189-7153208 None:intergenic 50.0%
TGTAGAACTTCAGGTCCACC+TGG + chr2_1:7153949-7153968 None:intergenic 50.0%
!! GAACGGTATCGGCACTGTTA+AGG + chr2_1:7154038-7154057 None:intergenic 50.0%
!! ACAGTGCCGATACCGTTCAA+AGG - chr2_1:7154040-7154059 Msa0191540:intron 50.0%
GCCGATACCGTTCAAAGGAA+AGG - chr2_1:7154045-7154064 Msa0191540:intron 50.0%
! GGCTTTTACCCTATCCCTCA+AGG - chr2_1:7154066-7154085 Msa0191540:intron 50.0%
!! GCACTTCTTCTGAGACCGTT+CGG + chr2_1:7154573-7154592 None:intergenic 50.0%
CAGGTATGTGCTCTTCTAGC+TGG - chr2_1:7145022-7145041 Msa0191540:intron 50.0%
! GTATGTGCTCTTCTAGCTGG+AGG - chr2_1:7145025-7145044 Msa0191540:intron 50.0%
TCCTGAGGGACAAGTTCTTC+CGG - chr2_1:7154751-7154770 Msa0191540:intron 50.0%
GCATCCTTCAGAGAAATCCC+GGG + chr2_1:7145103-7145122 None:intergenic 50.0%
CTGAGGTTGCATGTACTGTG+TGG - chr2_1:7145134-7145153 Msa0191540:intron 50.0%
TGACAAGCCGGCTATCTAAG+GGG - chr2_1:7145170-7145189 Msa0191540:intron 50.0%
AGGTTTCCCCCTTAGATAGC+CGG + chr2_1:7154859-7154878 None:intergenic 50.0%
CAGGTTCATGGAGGTTCAAG+TGG - chr2_1:7155081-7155100 Msa0191540:intron 50.0%
GGACTTTGTGGCAAGGGTAA+AGG - chr2_1:7155368-7155387 Msa0191540:intron 50.0%
! AAGGAAGAAACTGGCGGACA+AGG - chr2_1:7145718-7145737 Msa0191540:intron 50.0%
!! TCAAGGGGGTGTTTCTACAG+TGG - chr2_1:7145973-7145992 Msa0191540:intron 50.0%
ATTTCACCTAAGGTTGGGCG+CGG - chr2_1:7155910-7155929 Msa0191540:intron 50.0%
GACAGCACACTACAGGAACA+AGG + chr2_1:7156214-7156233 None:intergenic 50.0%
!! GAAGGTGCCACAAAGGTGAT+TGG + chr2_1:7156447-7156466 None:intergenic 50.0%
!! GTCTACAGAAGGTGCCACAA+AGG + chr2_1:7156454-7156473 None:intergenic 50.0%
GTTTGGCCTGCAATTGCAGA+AGG - chr2_1:7146983-7147002 Msa0191540:intron 50.0%
GCCTGCAATTGCAGAAGGAA+AGG - chr2_1:7156712-7156731 Msa0191540:intron 50.0%
GCTGACTGCTTTCCATAAGC+CGG + chr2_1:7147066-7147085 None:intergenic 50.0%
! ATAGGGGCTAGCACCTTGAG+GGG + chr2_1:7144003-7144022 None:intergenic 55.0%
! GATAGGGGCTAGCACCTTGA+GGG + chr2_1:7144004-7144023 None:intergenic 55.0%
! TGTGCTCTTCTAGCTGGAGG+TGG - chr2_1:7145028-7145047 Msa0191540:intron 55.0%
CAAGTTCTTCCGGTTCCACC+TGG - chr2_1:7145082-7145101 Msa0191540:intron 55.0%
! GGATGCAGCCAGTTTTCCTG+AGG - chr2_1:7145117-7145136 Msa0191540:intron 55.0%
!! AGGGGGTGTTTCTACAGAGG+TGG - chr2_1:7145976-7145995 Msa0191540:intron 55.0%
GGCAAGCGTCTCACTGTACA+AGG - chr2_1:7146016-7146035 Msa0191540:CDS 55.0%
CTTGTGTCAGGCCCTGTTAC+TGG - chr2_1:7146498-7146517 Msa0191540:intron 55.0%
! TGTGGGTTATGTTCAGCGGC+TGG - chr2_1:7146902-7146921 Msa0191540:CDS 55.0%
AGCCTCCGCAGCTTCAGAAA+GGG + chr2_1:7147041-7147060 None:intergenic 55.0%
GGAGCTAGAAGCCTGCAAAG+TGG - chr2_1:7147643-7147662 Msa0191540:intron 55.0%
! CTTTGTAGTGGGGTGAGGTG+AGG - chr2_1:7148128-7148147 Msa0191540:intron 55.0%
! GTGTCAACCCTCCGGTTTTC+AGG - chr2_1:7148698-7148717 Msa0191540:intron 55.0%
ACTTACTGTGAGGGAGAGCG+AGG - chr2_1:7148884-7148903 Msa0191540:intron 55.0%
AGAGGGAGATGCATGCCTCT+TGG - chr2_1:7148968-7148987 Msa0191540:intron 55.0%
TGTAAGTCTCTCGCAGCTGC+AGG - chr2_1:7149635-7149654 Msa0191540:intron 55.0%
GGAATTGTGAGGCCACCCAT+TGG - chr2_1:7149710-7149729 Msa0191540:intron 55.0%
TCTTGCGGTGTACGTTGGAG+AGG + chr2_1:7149831-7149850 None:intergenic 55.0%
! GTCGCCCTTGTTATAGCTGC+AGG - chr2_1:7149902-7149921 Msa0191540:intron 55.0%
!! GGTCAGTTATTCTGGGACGG+AGG + chr2_1:7153190-7153209 None:intergenic 55.0%
CACTGTTAAGGGCAGTGGCA+TGG + chr2_1:7154026-7154045 None:intergenic 55.0%
ATCGGCACTGTTAAGGGCAG+TGG + chr2_1:7154031-7154050 None:intergenic 55.0%
GGCTTGCACCTTGAGGGATA+GGG + chr2_1:7154077-7154096 None:intergenic 55.0%
GATAGGGGCTTGCACCTTGA+GGG + chr2_1:7154083-7154102 None:intergenic 55.0%
TACGAGGTGTGTGGCTTCAC+AGG - chr2_1:7154682-7154701 Msa0191540:intron 55.0%
! TGTGCTCTTCTAGCTGGAGG+TGG - chr2_1:7145028-7145047 Msa0191540:intron 55.0%
ACCGGAAGAACTTGTCCCTC+AGG + chr2_1:7145076-7145095 None:intergenic 55.0%
CAAGTTCTTCCGGTTCCACC+CGG - chr2_1:7145082-7145101 Msa0191540:intron 55.0%
AAGTTCTTCCGGTTCCACCC+GGG - chr2_1:7154762-7154781 Msa0191540:intron 55.0%
AGAGAAATCCCGGGTGGAAC+CGG + chr2_1:7154773-7154792 None:intergenic 55.0%
TCCACCCGGGATTTCTCTGA+AGG - chr2_1:7154775-7154794 Msa0191540:intron 55.0%
TCCTTCAGAGAAATCCCGGG+TGG + chr2_1:7154779-7154798 None:intergenic 55.0%
GACAAGCCGGCTATCTAAGG+GGG - chr2_1:7145171-7145190 Msa0191540:intron 55.0%
GGCAAGCGTCTCACTGTACA+AGG - chr2_1:7146016-7146035 Msa0191540:CDS 55.0%
! TGTGGGTTATGTTCAGCGGC+TGG - chr2_1:7146902-7146921 Msa0191540:CDS 55.0%
CCTCCGCAGCTTCAGAAAGA+GGG + chr2_1:7156763-7156782 None:intergenic 55.0%
! TAGGGGCTAGCACCTTGAGG+GGG + chr2_1:7144002-7144021 None:intergenic 60.0%
! GGATAGGGGCTAGCACCTTG+AGG + chr2_1:7144005-7144024 None:intergenic 60.0%
! CAAGGTGCTAGCCCCTATCC+AGG - chr2_1:7144005-7144024 Msa0191540:three_prime_UTR 60.0%
CCTCCGCAGCTTCAGAAAGG+GGG + chr2_1:7147039-7147058 None:intergenic 60.0%
GCCTCCGCAGCTTCAGAAAG+GGG + chr2_1:7147040-7147059 None:intergenic 60.0%
GAGCCTCCGCAGCTTCAGAA+AGG + chr2_1:7147042-7147061 None:intergenic 60.0%
ATTAGCATGGCCCCTGCGCA+AGG - chr2_1:7149144-7149163 Msa0191540:intron 60.0%
TGCGTGTCATCCTTGCGCAG+GGG + chr2_1:7149157-7149176 None:intergenic 60.0%
GTGCGTGTCATCCTTGCGCA+GGG + chr2_1:7149158-7149177 None:intergenic 60.0%
TGTGCGTGTCATCCTTGCGC+AGG + chr2_1:7149159-7149178 None:intergenic 60.0%
GGGCTTGCACCTTGAGGGAT+AGG + chr2_1:7154078-7154097 None:intergenic 60.0%
GGATAGGGGCTTGCACCTTG+AGG + chr2_1:7154084-7154103 None:intergenic 60.0%
CAAGGTGCAAGCCCCTATCC+AGG - chr2_1:7154084-7154103 Msa0191540:intron 60.0%
!! CCCTCTTTCTGAAGCTGCGG+AGG - chr2_1:7156760-7156779 Msa0191540:intron 60.0%
GCCTCCGCAGCTTCAGAAAG+AGG + chr2_1:7147040-7147059 None:intergenic 60.0%
GGCGCTTATCCTCCCCCTCA+AGG - chr2_1:7143987-7144006 Msa0191540:three_prime_UTR 65.0%
!! CCCCCTTTCTGAAGCTGCGG+AGG - chr2_1:7147036-7147055 Msa0191540:intron 65.0%
CTGAAGCTGCGGAGGCTCAC+CGG - chr2_1:7147044-7147063 Msa0191540:intron 65.0%
!! TGCGGAGGCTCACCGGCTTA+TGG - chr2_1:7147051-7147070 Msa0191540:intron 65.0%
ACCTAAGGTTGGGCGCGGAG+AGG - chr2_1:7155915-7155934 Msa0191540:intron 65.0%
TCCTCTCCGCGCCCAACCTT+AGG + chr2_1:7155919-7155938 None:intergenic 65.0%
CTGAAGCTGCGGAGGCTCAC+CGG - chr2_1:7147044-7147063 Msa0191540:intron 65.0%
!! TGCGGAGGCTCACCGGCTTA+TGG - chr2_1:7147051-7147070 Msa0191540:intron 65.0%
! GGGCTAGCACCTTGAGGGGG+AGG + chr2_1:7143999-7144018 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 7143796 7157103 7143796 ID=Msa0191540;Name=Msa0191540
chr2_1 mRNA 7143796 7157103 7143796 ID=Msa0191540-mRNA-1;Parent=Msa0191540;Name=Msa0191540-mRNA-1;_AED=0.08;_eAED=0.08;_QI=1270|0.90|0.83|1|0.90|0.83|12|262|327
chr2_1 exon 7143796 7144257 7143796 ID=Msa0191540-mRNA-1:exon:3267;Parent=Msa0191540-mRNA-1
chr2_1 exon 7145193 7145351 7145193 ID=Msa0191540-mRNA-1:exon:3266;Parent=Msa0191540-mRNA-1
chr2_1 exon 7145491 7145598 7145491 ID=Msa0191540-mRNA-1:exon:3265;Parent=Msa0191540-mRNA-1
chr2_1 exon 7145734 7145815 7145734 ID=Msa0191540-mRNA-1:exon:3264;Parent=Msa0191540-mRNA-1
chr2_1 exon 7146016 7146195 7146016 ID=Msa0191540-mRNA-1:exon:3263;Parent=Msa0191540-mRNA-1
chr2_1 exon 7146726 7146971 7146726 ID=Msa0191540-mRNA-1:exon:3262;Parent=Msa0191540-mRNA-1
chr2_1 exon 7153531 7153981 7153531 ID=Msa0191540-mRNA-1:exon:3261;Parent=Msa0191540-mRNA-1
chr2_1 exon 7154862 7155020 7154862 ID=Msa0191540-mRNA-1:exon:3260;Parent=Msa0191540-mRNA-1
chr2_1 exon 7155160 7155267 7155160 ID=Msa0191540-mRNA-1:exon:3259;Parent=Msa0191540-mRNA-1
chr2_1 exon 7155410 7155491 7155410 ID=Msa0191540-mRNA-1:exon:3258;Parent=Msa0191540-mRNA-1
chr2_1 exon 7155695 7155874 7155695 ID=Msa0191540-mRNA-1:exon:3257;Parent=Msa0191540-mRNA-1
chr2_1 exon 7156805 7157103 7156805 ID=Msa0191540-mRNA-1:exon:3256;Parent=Msa0191540-mRNA-1
chr2_1 five_prime_UTR 7156805 7157103 7156805 ID=Msa0191540-mRNA-1:five_prime_utr;Parent=Msa0191540-mRNA-1
chr2_1 five_prime_UTR 7155695 7155874 7155695 ID=Msa0191540-mRNA-1:five_prime_utr;Parent=Msa0191540-mRNA-1
chr2_1 five_prime_UTR 7155410 7155491 7155410 ID=Msa0191540-mRNA-1:five_prime_utr;Parent=Msa0191540-mRNA-1
chr2_1 five_prime_UTR 7155160 7155267 7155160 ID=Msa0191540-mRNA-1:five_prime_utr;Parent=Msa0191540-mRNA-1
chr2_1 five_prime_UTR 7154862 7155020 7154862 ID=Msa0191540-mRNA-1:five_prime_utr;Parent=Msa0191540-mRNA-1
chr2_1 five_prime_UTR 7153540 7153981 7153540 ID=Msa0191540-mRNA-1:five_prime_utr;Parent=Msa0191540-mRNA-1
chr2_1 CDS 7153531 7153539 7153531 ID=Msa0191540-mRNA-1:cds;Parent=Msa0191540-mRNA-1
chr2_1 CDS 7146726 7146971 7146726 ID=Msa0191540-mRNA-1:cds;Parent=Msa0191540-mRNA-1
chr2_1 CDS 7146016 7146195 7146016 ID=Msa0191540-mRNA-1:cds;Parent=Msa0191540-mRNA-1
chr2_1 CDS 7145734 7145815 7145734 ID=Msa0191540-mRNA-1:cds;Parent=Msa0191540-mRNA-1
chr2_1 CDS 7145491 7145598 7145491 ID=Msa0191540-mRNA-1:cds;Parent=Msa0191540-mRNA-1
chr2_1 CDS 7145193 7145351 7145193 ID=Msa0191540-mRNA-1:cds;Parent=Msa0191540-mRNA-1
chr2_1 CDS 7144058 7144257 7144058 ID=Msa0191540-mRNA-1:cds;Parent=Msa0191540-mRNA-1
chr2_1 three_prime_UTR 7143796 7144057 7143796 ID=Msa0191540-mRNA-1:three_prime_utr;Parent=Msa0191540-mRNA-1
Gene Sequence

>Msa0191540

ATGAAAGTGGCAGTTGTAATTACAACACCAGGTGGACCTGAAGTTCTACAACTTCAAGAGGTTGATGACCCTCAACCTAAAGACAATGAAGTACTCATCAGAGTCCATGCCACTGCCCTTAACAGTGCCGATACCGTTCAAAGGAAAGGCTTTTACCCTATCCCTCAAGGTGCAAGCCCCTATCCAGGTCTTGAATGTTCTGGAACTATTGAATCCGTTGGTATAAACGTTTCCAACTGGAAAATCGGAGATCAGGTATGTGCTCTTCTAGCTGGAGGTGGTTATGCTGAAAAAGTAGCAGTTCCTGAGGGACAAGTTCTTCCGGTTCCACCCGGGATTTCTCTGAAGGATGCAGCTAGTTTTACTGAGGTTGCATGTACTGTGTGGTCGACGATTTTTATGACAAGCCGGCTATCTAAGGGGGAAACCTTATTGGTTCATGGAGGTTCAAGTGGAATCGGAACATTTGCAATTCAGATAGCTAAGTACCGAGGATCAAGAGTATTTGTTACTGCAGGTAGTGAAGAGAAGCTAGCTTTTTGCAAGAGTATTGGAGCTGATGTTGGTATCAATTACAAAACAGAGGACTTTGTGGCAAGGGTAAAGGAAGAAACTGGCGGACAAGGTGTTGATGTTATTCTTGATTGTATGGGAGCATCCTACTATCAAAGAAATCTTGATAGCTTAAATTTTGATGGAAGGCTTTTTATTATCGGCTTTCAAGGGGGTGTTTCTACAGTGGTAGATCTACGTGCTTTATTTGGCAAGCGTCTCACTGTACAAGCGGCTGGCTTGCGAAGTAGAAGTCCTGAAAATAAAGCTGTGATCGTTGCTGAAGTAGAGAAGAATGTTTGGCCTGCAATTGCAGAAGGAAAGGTTAAGCCTGTGGTTTACAAATCATTCCCTCTTTCTGAAGCTGCGGAGGCTCACCGGCTTATGGAAAGCAGTCAGCATATTGGAAAGATATTGCTTGTTGTGGCATGA
Protein sequence

>Msa0191540

MKVAVVITTPGGPEVLQLQEVDDPQPKDNEVLIRVHATALNSADTVQRKGFYPIPQGASPYPGLECSGTIESVGINVSNWKIGDQVCALLAGGGYAEKVAVPEGQVLPVPPGISLKDAASFTEVACTVWSTIFMTSRLSKGETLLVHGGSSGIGTFAIQIAKYRGSRVFVTAGSEEKLAFCKSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLDSLNFDGRLFIIGFQGGVSTVVDLRALFGKRLTVQAAGLRSRSPENKAVIVAEVEKNVWPAIAEGKVKPVVYKSFPLSEAAEAHRLMESSQHIGKILLVVA*