Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197480 | AES64453.2 | 94.379 | 427 | 2 | 2 | 32 | 437 | 143 | 568 | 0.0 | 810 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197480 | sp|O49639|CDS2_ARATH | 74.468 | 423 | 84 | 3 | 33 | 434 | 1 | 420 | 0.0 | 640 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197480 | G7IM02 | 94.379 | 427 | 2 | 2 | 32 | 437 | 143 | 568 | 0.0 | 810 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0197480 | Msa1190460 | 0.802587 | 5.225959e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197480 | MtrunA17_Chr2g0289721 | 94.366 | 426 | 2 | 2 | 33 | 437 | 1 | 425 | 0.0 | 808 |
| Msa0197480 | MtrunA17_Chr5g0444871 | 69.212 | 419 | 107 | 2 | 35 | 432 | 2 | 419 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197480 | AT4G22340.1 | 74.468 | 423 | 84 | 3 | 33 | 434 | 1 | 420 | 0.0 | 640 |
| Msa0197480 | AT4G22340.3 | 74.468 | 423 | 84 | 3 | 33 | 434 | 25 | 444 | 0.0 | 640 |
| Msa0197480 | AT1G62430.1 | 72.619 | 420 | 93 | 2 | 36 | 434 | 2 | 420 | 0.0 | 634 |
| Msa0197480 | AT4G26770.1 | 69.340 | 424 | 104 | 3 | 35 | 435 | 48 | 468 | 0.0 | 590 |
| Msa0197480 | AT4G22340.2 | 78.729 | 362 | 56 | 1 | 94 | 434 | 1 | 362 | 0.0 | 585 |
Find 118 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATTCTAATTGTTGTATT+TGG | 0.057952 | 2_1:+15483836 | Msa0197480:CDS |
| ACTGCAATGCTATTTGTTTA+TGG | 0.097417 | 2_1:+15483437 | Msa0197480:CDS |
| TATATCTTTGGTTTCTTCTT+TGG | 0.152373 | 2_1:+15484991 | Msa0197480:CDS |
| GACATTGCTGCTTATATCTT+TGG | 0.207295 | 2_1:+15484979 | Msa0197480:CDS |
| TGTTAGAGAGCTACCTTTCT+TGG | 0.226947 | 2_1:-15485311 | None:intergenic |
| TCTTGTCATTAACAAGTAAT+TGG | 0.231200 | 2_1:-15482923 | None:intergenic |
| TGCATTTCGATTCACAATAT+TGG | 0.247173 | 2_1:-15487677 | None:intergenic |
| CTTTGTGTTGATCATCTATA+TGG | 0.260220 | 2_1:+15483001 | Msa0197480:CDS |
| TATTCGTCCGTTTGGATGAT+TGG | 0.263993 | 2_1:+15482975 | Msa0197480:CDS |
| GATTGGGCTCAGGATTTATA+TGG | 0.273712 | 2_1:+15483750 | Msa0197480:intron |
| ATTCTCTTGCCATGAAGATT+TGG | 0.318817 | 2_1:-15483058 | None:intergenic |
| AAGATGTACAAGTACCAATT+TGG | 0.321940 | 2_1:+15483794 | Msa0197480:CDS |
| CAGGAGGAGGAGGACGAATT+AGG | 0.328625 | 2_1:+15482009 | Msa0197480:CDS |
| TGATTCTAATTGTTGTATTT+GGG | 0.333738 | 2_1:+15483837 | Msa0197480:CDS |
| CCCAACAATGAGTAAGATTC+TGG | 0.334181 | 2_1:-15485466 | None:intergenic |
| AACCATCATATCTGCATTCA+TGG | 0.339590 | 2_1:+15485080 | Msa0197480:CDS |
| CCGTTCGCTTTACTAACTTC+TGG | 0.339604 | 2_1:-15482894 | None:intergenic |
| CAATGGCATGCTTTATGTCT+TGG | 0.345146 | 2_1:+15486117 | Msa0197480:CDS |
| TGTTGTTATCCAAATCTTCA+TGG | 0.345481 | 2_1:+15483049 | Msa0197480:CDS |
| AAGCTCTGTATCGGAGGCTT+GGG | 0.350396 | 2_1:+15487208 | Msa0197480:CDS |
| TCCAAGCATACTGTCCAAAT+TGG | 0.356580 | 2_1:-15483808 | None:intergenic |
| TGTTGGGATGGACTCCTCAC+TGG | 0.369252 | 2_1:+15485482 | Msa0197480:CDS |
| GCTTCAATTATTGCACCTTT+CGG | 0.369719 | 2_1:+15486147 | Msa0197480:CDS |
| TGCTACTCCCTGTACATTAC+AGG | 0.379155 | 2_1:+15483554 | Msa0197480:CDS |
| GGTTGGCTTGACTGTGATCC+TGG | 0.379518 | 2_1:+15485430 | Msa0197480:CDS |
| GAAATGCAGGCTGTCACATT+TGG | 0.381466 | 2_1:+15487692 | Msa0197480:three_prime_UTR |
| TTCGTGCGTATTCGTCCGTT+TGG | 0.388827 | 2_1:+15482967 | Msa0197480:CDS |
| TTGGAGATAGTTTAATCAAT+GGG | 0.389619 | 2_1:-15485020 | None:intergenic |
| TTTGTCGGTTGAGATGATTT+TGG | 0.395357 | 2_1:+15487060 | Msa0197480:CDS |
| AACTATCTCCAAAGAAAACT+TGG | 0.399939 | 2_1:+15485031 | Msa0197480:CDS |
| GCCAGAATCTTACTCATTGT+TGG | 0.400503 | 2_1:+15485465 | Msa0197480:CDS |
| GCTGCGAGAGCGGTTGGCGG+CGG | 0.415610 | 2_1:-15481735 | None:intergenic |
| TAAATGCAGGATTTGTCAAC+TGG | 0.419677 | 2_1:+15485409 | Msa0197480:intron |
| TTGATGACAATAAGCGTTGC+TGG | 0.422786 | 2_1:-15484955 | None:intergenic |
| TGTCCTTGTGTAGATGGTTA+TGG | 0.424136 | 2_1:+15486991 | Msa0197480:intron |
| CGGCGGAAGAAGACGGAGGT+TGG | 0.426426 | 2_1:-15481718 | None:intergenic |
| ATTCGTCCGTTTGGATGATT+GGG | 0.432868 | 2_1:+15482976 | Msa0197480:CDS |
| CCTACTTCTACTTCTTCCTC+AGG | 0.434781 | 2_1:+15481990 | Msa0197480:CDS |
| GTTGTCTTGTGCAGTTTCCT+TGG | 0.435920 | 2_1:+15486070 | Msa0197480:intron |
| CCAGAATCTTACTCATTGTT+GGG | 0.435970 | 2_1:+15485466 | Msa0197480:CDS |
| ATTGATGAGCCTGTCATTTG+AGG | 0.440667 | 2_1:+15487179 | Msa0197480:CDS |
| GGCGGAAGAAGACGGAGGTT+GGG | 0.444138 | 2_1:-15481717 | None:intergenic |
| GAAGCTCTGTATCGGAGGCT+TGG | 0.444577 | 2_1:+15487207 | Msa0197480:CDS |
| TCTTTGCAAGTGGTTTCAAA+AGG | 0.445299 | 2_1:+15486175 | Msa0197480:CDS |
| CGTTCTTCTTGAGCTGCCAT+TGG | 0.445478 | 2_1:-15487525 | None:intergenic |
| CCATTGCTCACTCAATATCT+TGG | 0.447445 | 2_1:+15487489 | Msa0197480:three_prime_UTR |
| ACCAATTTGGACAGTATGCT+TGG | 0.449591 | 2_1:+15483807 | Msa0197480:CDS |
| TTTGTAGCTTGCTAACATCA+TGG | 0.450221 | 2_1:+15485265 | Msa0197480:intron |
| TTTGGAGATAGTTTAATCAA+TGG | 0.462574 | 2_1:-15485021 | None:intergenic |
| ATCTCAACCGACAAACTTTG+CGG | 0.462989 | 2_1:-15487052 | None:intergenic |
| CACCGTTACCTGTAATGTAC+AGG | 0.471485 | 2_1:-15483562 | None:intergenic |
| CATAAAGCATGCCATTGAAC+TGG | 0.478002 | 2_1:-15486111 | None:intergenic |
| TGTTGTGCCGCAAAGTTTGT+CGG | 0.485826 | 2_1:+15487045 | Msa0197480:CDS |
| TTGTAGCTTGCTAACATCAT+GGG | 0.487736 | 2_1:+15485266 | Msa0197480:intron |
| GTTAGTAAAGCGAACGGCAG+CGG | 0.494567 | 2_1:+15482900 | Msa0197480:CDS |
| CTTCTTGTTCCTCAAATGAC+AGG | 0.501021 | 2_1:-15487188 | None:intergenic |
| CAGTCTTATAAAGTATCATA+TGG | 0.501171 | 2_1:+15483526 | Msa0197480:CDS |
| ATACCTGAGTGAAGTGGAAG+TGG | 0.503141 | 2_1:-15481759 | None:intergenic |
| CTTTGCAAGTGGTTTCAAAA+GGG | 0.503734 | 2_1:+15486176 | Msa0197480:CDS |
| TCAGTAAGTCCACCATGTCC+TGG | 0.503899 | 2_1:-15486343 | None:intergenic |
| AGTGGAGCTGCGAGAGCGGT+TGG | 0.506694 | 2_1:-15481741 | None:intergenic |
| TATCGATCCTACCAGTTCAA+TGG | 0.506947 | 2_1:+15486100 | Msa0197480:CDS |
| GGAGCTGCGAGAGCGGTTGG+CGG | 0.510265 | 2_1:-15481738 | None:intergenic |
| AATGCTTGGCACGGTGAAAG+AGG | 0.511178 | 2_1:-15483864 | None:intergenic |
| TGCAGGATTTGTCAACTGGT+TGG | 0.512807 | 2_1:+15485413 | Msa0197480:intron |
| TTTGTGTTGATCATCTATAT+GGG | 0.517084 | 2_1:+15483002 | Msa0197480:CDS |
| TACTGACAGAATGGACTGCC+AGG | 0.523591 | 2_1:+15486360 | Msa0197480:CDS |
| ACTTCTTCCTCAGGAGGAGG+AGG | 0.524410 | 2_1:+15481999 | Msa0197480:CDS |
| AAGCCGATATAAAACCTTGT+CGG | 0.529243 | 2_1:-15483498 | None:intergenic |
| AATCTTACTCATTGTTGGGA+TGG | 0.530062 | 2_1:+15485470 | Msa0197480:CDS |
| ACGTATTCTGAGTCAACGTC+TGG | 0.532335 | 2_1:+15483460 | Msa0197480:CDS |
| TTCGGAGGTTTCTTTGCAAG+TGG | 0.535033 | 2_1:+15486165 | Msa0197480:CDS |
| TGATTCAAGAGCAATGCAAA+AGG | 0.537960 | 2_1:+15481959 | Msa0197480:intron |
| GGCGATAGTATTCCAGGACA+TGG | 0.545008 | 2_1:+15486331 | Msa0197480:CDS |
| CACCATGAATGCAGATATGA+TGG | 0.549029 | 2_1:-15485082 | None:intergenic |
| TCTACTTCTTCCTCAGGAGG+AGG | 0.551269 | 2_1:+15481996 | Msa0197480:CDS |
| TGGTGGACTTACTGACAGAA+TGG | 0.551941 | 2_1:+15486351 | Msa0197480:CDS |
| GTGGCTGACATGTCCAAGAA+AGG | 0.556048 | 2_1:+15485298 | Msa0197480:CDS |
| CGAATACGCACGAATTAACA+TGG | 0.557099 | 2_1:-15482958 | None:intergenic |
| CCTGAGGAAGAAGTAGAAGT+AGG | 0.558221 | 2_1:-15481990 | None:intergenic |
| TCAATTATTGCACCTTTCGG+AGG | 0.561762 | 2_1:+15486150 | Msa0197480:CDS |
| AGGAACAAGAAGCTCTGTAT+CGG | 0.565483 | 2_1:+15487199 | Msa0197480:CDS |
| GATTTGGATAACAACAATCA+TGG | 0.567126 | 2_1:-15483042 | None:intergenic |
| AAAGCTCCCAATCATCCAAA+CGG | 0.576010 | 2_1:-15482982 | None:intergenic |
| GTTGGGATGGACTCCTCACT+GGG | 0.577627 | 2_1:+15485483 | Msa0197480:CDS |
| TGGAATATTCAAATAGCCAA+TGG | 0.577695 | 2_1:+15487509 | Msa0197480:three_prime_UTR |
| TCTCCAAAGAAAACTTGGGA+GGG | 0.578292 | 2_1:+15485036 | Msa0197480:CDS |
| ACTATCTCCAAAGAAAACTT+GGG | 0.580605 | 2_1:+15485032 | Msa0197480:CDS |
| ACAAGATTTATTGTTTATTG+CGG | 0.587773 | 2_1:-15487633 | None:intergenic |
| AATATTGTGAATCGAAATGC+AGG | 0.589588 | 2_1:+15487679 | Msa0197480:three_prime_UTR |
| AAATGTTAATACTCCCCTCA+AGG | 0.590057 | 2_1:-15487567 | None:intergenic |
| ACTTCTACTTCTTCCTCAGG+AGG | 0.590407 | 2_1:+15481993 | Msa0197480:CDS |
| ATCTCCAAAGAAAACTTGGG+AGG | 0.599776 | 2_1:+15485035 | Msa0197480:CDS |
| TGGAAGTGGAGCTGCGAGAG+CGG | 0.601713 | 2_1:-15481745 | None:intergenic |
| AAGCATGCCATTGAACTGGT+AGG | 0.609994 | 2_1:-15486107 | None:intergenic |
| AGGATCGATATCTCTTTCCA+AGG | 0.610620 | 2_1:-15486087 | None:intergenic |
| GCACCGAAAACGTTCTAATG+AGG | 0.610668 | 2_1:+15482031 | Msa0197480:CDS |
| CTTGGGGAAGTGTTGCAACA+AGG | 0.612340 | 2_1:+15487225 | Msa0197480:CDS |
| CCAAGATATTGAGTGAGCAA+TGG | 0.616069 | 2_1:-15487489 | None:intergenic |
| AATTCGTCCTCCTCCTCCTG+AGG | 0.616235 | 2_1:-15482006 | None:intergenic |
| CGGTTGGCGGCGGAAGAAGA+CGG | 0.618626 | 2_1:-15481725 | None:intergenic |
| GTTGTCTTAGATCCGTTGCA+AGG | 0.620113 | 2_1:+15487257 | Msa0197480:exon |
| CAATCATGGCAGTAATGTAG+AGG | 0.624248 | 2_1:-15483028 | None:intergenic |
| TCTGGCTTAAACAGAAAACC+AGG | 0.630795 | 2_1:-15485448 | None:intergenic |
| AACAAGAAGCTCTGTATCGG+AGG | 0.631191 | 2_1:+15487202 | Msa0197480:CDS |
| GCGGCACAACAAATGACTGA+TGG | 0.637584 | 2_1:-15487033 | None:intergenic |
| CCAGAAGTTAGTAAAGCGAA+CGG | 0.645705 | 2_1:+15482894 | Msa0197480:CDS |
| AGCTCTGTATCGGAGGCTTG+GGG | 0.646302 | 2_1:+15487209 | Msa0197480:CDS |
| TGGAGATAGTTTAATCAATG+GGG | 0.649472 | 2_1:-15485019 | None:intergenic |
| GCTCCACTTCCACTTCACTC+AGG | 0.656516 | 2_1:+15481756 | Msa0197480:CDS |
| ACATCATGGGTCGTTCTCAG+TGG | 0.660216 | 2_1:+15485279 | Msa0197480:CDS |
| ACCGTTACCTGTAATGTACA+GGG | 0.665629 | 2_1:-15483561 | None:intergenic |
| AGGACAAATACACCTTGCAA+CGG | 0.666313 | 2_1:-15487269 | None:intergenic |
| TAACACAGTAAATTCCGACA+AGG | 0.668253 | 2_1:+15483484 | Msa0197480:CDS |
| TGTCAAGTGCTTACCCAGTG+AGG | 0.669294 | 2_1:-15485496 | None:intergenic |
| CTTGCAAAGAAACCTCCGAA+AGG | 0.699905 | 2_1:-15486162 | None:intergenic |
| GATAGTATTCCAGGACATGG+TGG | 0.722216 | 2_1:+15486334 | Msa0197480:CDS |
| TTGGCGGCGGAAGAAGACGG+AGG | 0.728676 | 2_1:-15481722 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGGAAAAAAATTATATTT+TGG | + | chr2_1:15482553-15482572 | Msa0197480:intron | 10.0% |
| !!! | TAGGAAAAAAATTATATTTT+GGG | + | chr2_1:15482554-15482573 | Msa0197480:intron | 10.0% |
| !! | ATTAATAAGTAAAATGATTT+AGG | + | chr2_1:15482639-15482658 | Msa0197480:intron | 10.0% |
| !!! | CAAGAAAATAATTTTTATTT+AGG | - | chr2_1:15484746-15484765 | None:intergenic | 10.0% |
| !! | AATATGTTCTCAAAATAAAA+AGG | - | chr2_1:15481622-15481641 | None:intergenic | 15.0% |
| !! | AAATGAAGAGATTAATTAAT+TGG | - | chr2_1:15481831-15481850 | None:intergenic | 15.0% |
| !!! | TTTTATTCTCTATTTGATTT+TGG | + | chr2_1:15481850-15481869 | Msa0197480:intron | 15.0% |
| !!! | TAAGAATAAATATAGGTTTT+AGG | + | chr2_1:15482245-15482264 | Msa0197480:intron | 15.0% |
| !!! | AAGAATAAATATAGGTTTTA+GGG | + | chr2_1:15482246-15482265 | Msa0197480:intron | 15.0% |
| !!! | TACAAATGATAAAAGTATAA+GGG | - | chr2_1:15482464-15482483 | None:intergenic | 15.0% |
| !!! | ATACAAATGATAAAAGTATA+AGG | - | chr2_1:15482465-15482484 | None:intergenic | 15.0% |
| !!! | AGGAAAAAAATTATATTTTG+GGG | + | chr2_1:15482555-15482574 | Msa0197480:intron | 15.0% |
| !! | ATCAAAATTGTATCAATATA+CGG | + | chr2_1:15482811-15482830 | Msa0197480:intron | 15.0% |
| !! | ATAAAATTCATGTAATAACT+TGG | + | chr2_1:15483371-15483390 | Msa0197480:intron | 15.0% |
| !!! | TAATCTTTTTTCCTATTTTA+AGG | - | chr2_1:15484183-15484202 | None:intergenic | 15.0% |
| !! | TTAAAATAGGAAAAAAGATT+AGG | + | chr2_1:15484182-15484201 | Msa0197480:intron | 15.0% |
| !! | TAAAATAGGAAAAAAGATTA+GGG | + | chr2_1:15484183-15484202 | Msa0197480:intron | 15.0% |
| !! | AAAATATGATGAAACATTAA+AGG | + | chr2_1:15486583-15486602 | Msa0197480:intron | 15.0% |
| !! | AAATATGATGAAACATTAAA+GGG | + | chr2_1:15486584-15486603 | Msa0197480:intron | 15.0% |
| !!! | ATTTTTGTAAATAAAATACC+TGG | - | chr2_1:15487087-15487106 | None:intergenic | 15.0% |
| !! | TTTGAAAAATGTTGTATTTA+TGG | + | chr2_1:15487133-15487152 | Msa0197480:intron | 15.0% |
| !! | AAGAATATTAATAAGCCAAA+CGG | - | chr2_1:15481664-15481683 | None:intergenic | 20.0% |
| !! | ATAAATGTATTCTGTATTAG+TGG | + | chr2_1:15482120-15482139 | Msa0197480:intron | 20.0% |
| !!! | GGAAAAAAATTATATTTTGG+GGG | + | chr2_1:15482556-15482575 | Msa0197480:intron | 20.0% |
| !! | AAAAAATCGCTATATAAACA+TGG | - | chr2_1:15483312-15483331 | None:intergenic | 20.0% |
| !!! | ATGTTTATATAGCGATTTTT+TGG | + | chr2_1:15483311-15483330 | Msa0197480:intron | 20.0% |
| !!! | TATTTTTATTCTAAATCGGA+TGG | - | chr2_1:15483354-15483373 | None:intergenic | 20.0% |
| !!! | TAACTTGGTTATGTTTTAAT+TGG | + | chr2_1:15483386-15483405 | Msa0197480:intron | 20.0% |
| !!! | TTTTGTTGTTTTAATGTTCA+TGG | + | chr2_1:15483593-15483612 | Msa0197480:intron | 20.0% |
| !!! | TTTGTTGTTTTAATGTTCAT+GGG | + | chr2_1:15483594-15483613 | Msa0197480:intron | 20.0% |
| !!! | AATTTGGTTTCTAGTTTTTT+AGG | + | chr2_1:15483654-15483673 | Msa0197480:intron | 20.0% |
| !! | ATGATTCTAATTGTTGTATT+TGG | + | chr2_1:15483836-15483855 | Msa0197480:CDS | 20.0% |
| !! | TGATTCTAATTGTTGTATTT+GGG | + | chr2_1:15483837-15483856 | Msa0197480:CDS | 20.0% |
| !! | CTGGTAATTTAATCAATAAA+AGG | + | chr2_1:15483901-15483920 | Msa0197480:intron | 20.0% |
| !! | GGTTAAGTAAATTTCATATT+TGG | + | chr2_1:15484091-15484110 | Msa0197480:intron | 20.0% |
| !! | TTTATGCTTATGAATGTAAT+CGG | - | chr2_1:15484413-15484432 | None:intergenic | 20.0% |
| !! | AAATTTAAAAGTAAATTGGG+AGG | - | chr2_1:15484690-15484709 | None:intergenic | 20.0% |
| !! | TTAATTCAAATAAAACGCAA+TGG | - | chr2_1:15484895-15484914 | None:intergenic | 20.0% |
| !! | TATAAAAAAATCAGTGAAAC+AGG | - | chr2_1:15484922-15484941 | None:intergenic | 20.0% |
| !!! | TTTCACTGATTTTTTTATAC+AGG | + | chr2_1:15484923-15484942 | Msa0197480:intron | 20.0% |
| !!! | ATAAGTTATCTGTTGAATTT+TGG | - | chr2_1:15485594-15485613 | None:intergenic | 20.0% |
| !!! | AAATGTGTTATTGGTAAATA+TGG | - | chr2_1:15485617-15485636 | None:intergenic | 20.0% |
| !!! | TATTTACCAATAACACATTT+TGG | + | chr2_1:15485617-15485636 | Msa0197480:intron | 20.0% |
| !! | TTGAGCTTATAATATATGTA+TGG | + | chr2_1:15485974-15485993 | Msa0197480:intron | 20.0% |
| !! | GATTCTTTCTAATATAGTTT+AGG | - | chr2_1:15486459-15486478 | None:intergenic | 20.0% |
| !! | CAAACAAAGTTGTAAAAAAA+AGG | + | chr2_1:15486535-15486554 | Msa0197480:intron | 20.0% |
| !! | AATATGATGAAACATTAAAG+GGG | + | chr2_1:15486585-15486604 | Msa0197480:intron | 20.0% |
| !! | ACACTAAATATACAAATAGA+AGG | + | chr2_1:15486615-15486634 | Msa0197480:intron | 20.0% |
| !! | CACTAAATATACAAATAGAA+GGG | + | chr2_1:15486616-15486635 | Msa0197480:intron | 20.0% |
| !!! | TTTTCAGTTCATTATAAGTA+TGG | + | chr2_1:15486901-15486920 | Msa0197480:intron | 20.0% |
| !! | TTTCAGTTCATTATAAGTAT+GGG | + | chr2_1:15486902-15486921 | Msa0197480:intron | 20.0% |
| !! | AAATGAAAGAATCAAATAGA+AGG | - | chr2_1:15487299-15487318 | None:intergenic | 20.0% |
| !! | ATTTGATTCTTTCATTTACA+AGG | + | chr2_1:15487302-15487321 | Msa0197480:intron | 20.0% |
| !! | TTTGATTCTTTCATTTACAA+GGG | + | chr2_1:15487303-15487322 | Msa0197480:intron | 20.0% |
| !!! | GTTCTTGAATTTTTTATTGA+TGG | + | chr2_1:15487452-15487471 | Msa0197480:intron | 20.0% |
| !! | ACAAGATTTATTGTTTATTG+CGG | - | chr2_1:15487636-15487655 | None:intergenic | 20.0% |
| ! | ATAATTGGAATTTGGAAGAA+AGG | + | chr2_1:15482199-15482218 | Msa0197480:intron | 25.0% |
| ! | TTGTATAAGCTCAATTCAAA+CGG | - | chr2_1:15482273-15482292 | None:intergenic | 25.0% |
| !!! | AAGTGTGTTATTGTGATTTT+AGG | + | chr2_1:15482535-15482554 | Msa0197480:intron | 25.0% |
| !! | TAACTTGGGTGTATTTTATA+TGG | - | chr2_1:15482748-15482767 | None:intergenic | 25.0% |
| !! | ATCAATGCAAAGTTTAACTT+GGG | - | chr2_1:15482762-15482781 | None:intergenic | 25.0% |
| ! | TTTCTGAATGTCTTTATATC+AGG | + | chr2_1:15482866-15482885 | Msa0197480:intron | 25.0% |
| ! | TCTTGTCATTAACAAGTAAT+TGG | - | chr2_1:15482926-15482945 | None:intergenic | 25.0% |
| !! | TTTGTGTTGATCATCTATAT+GGG | + | chr2_1:15483002-15483021 | Msa0197480:CDS | 25.0% |
| ! | TAATAAATTGCCTTGATGAA+GGG | - | chr2_1:15483170-15483189 | None:intergenic | 25.0% |
| ! | ATAATAAATTGCCTTGATGA+AGG | - | chr2_1:15483171-15483190 | None:intergenic | 25.0% |
| ! | ACATCTATTATATCTGTCAT+AGG | + | chr2_1:15483277-15483296 | Msa0197480:intron | 25.0% |
| ! | CATCTATTATATCTGTCATA+GGG | + | chr2_1:15483278-15483297 | Msa0197480:intron | 25.0% |
| !! | CAGTCTTATAAAGTATCATA+TGG | + | chr2_1:15483526-15483545 | Msa0197480:CDS | 25.0% |
| !!! | GATTATTTTACACCATTGTA+AGG | + | chr2_1:15483691-15483710 | Msa0197480:intron | 25.0% |
| !! | AAATGGTTAAGAAGTTTTCT+GGG | - | chr2_1:15483952-15483971 | None:intergenic | 25.0% |
| ! | AACTGAAAAAGTTGTTTACA+TGG | - | chr2_1:15484014-15484033 | None:intergenic | 25.0% |
| ! | AACCAATAAAGCTGTAAAAT+AGG | + | chr2_1:15484286-15484305 | Msa0197480:intron | 25.0% |
| !!! | ATCCTATTTTACAGCTTTAT+TGG | - | chr2_1:15484291-15484310 | None:intergenic | 25.0% |
| ! | TGAATCAAATAGTCTTCAAT+TGG | + | chr2_1:15484376-15484395 | Msa0197480:intron | 25.0% |
| ! | ACATTCATAAGCATAAACTA+AGG | + | chr2_1:15484416-15484435 | Msa0197480:intron | 25.0% |
| ! | AGCAATCAAACAAATGAAAT+GGG | + | chr2_1:15484449-15484468 | Msa0197480:intron | 25.0% |
| ! | AAGAATTGATCTCAGTATAT+TGG | + | chr2_1:15484560-15484579 | Msa0197480:intron | 25.0% |
| ! | ATGACTAAGTTATTCTAATG+AGG | - | chr2_1:15484831-15484850 | None:intergenic | 25.0% |
| !! | TATATCTTTGGTTTCTTCTT+TGG | + | chr2_1:15484991-15485010 | Msa0197480:CDS | 25.0% |
| ! | TTGGAGATAGTTTAATCAAT+GGG | - | chr2_1:15485023-15485042 | None:intergenic | 25.0% |
| ! | TTTGGAGATAGTTTAATCAA+TGG | - | chr2_1:15485024-15485043 | None:intergenic | 25.0% |
| ! | GAACTTGAAAAACATAGAAT+TGG | + | chr2_1:15485682-15485701 | Msa0197480:intron | 25.0% |
| ! | AGATAGAATTACCATTAGAA+AGG | + | chr2_1:15485878-15485897 | Msa0197480:intron | 25.0% |
| ! | GAGGTATAAATAGATTTGAT+GGG | + | chr2_1:15486284-15486303 | Msa0197480:intron | 25.0% |
| ! | TCTACAAACTTATTCTAAGT+TGG | + | chr2_1:15486402-15486421 | Msa0197480:intron | 25.0% |
| ! | TGTAAAAAAAAGGAGATAGA+AGG | + | chr2_1:15486545-15486564 | Msa0197480:intron | 25.0% |
| ! | CTTACTGAAAATATCTTCAA+TGG | + | chr2_1:15486703-15486722 | Msa0197480:intron | 25.0% |
| ! | ATTTAATATTGTTGTGAACG+TGG | + | chr2_1:15486754-15486773 | Msa0197480:intron | 25.0% |
| ! | AACTAAAGGACAAATAGTAA+AGG | - | chr2_1:15486880-15486899 | None:intergenic | 25.0% |
| ! | AATGAACTGAAAAGAACTAA+AGG | - | chr2_1:15486894-15486913 | None:intergenic | 25.0% |
| ! | TTCAGTTCATTATAAGTATG+GGG | + | chr2_1:15486903-15486922 | Msa0197480:intron | 25.0% |
| AATATTAATAAGCCAAACGG+TGG | - | chr2_1:15481661-15481680 | None:intergenic | 30.0% | |
| ACGTTTCATATTTACTTTGC+AGG | + | chr2_1:15481899-15481918 | Msa0197480:intron | 30.0% | |
| TTTGTCAAATGTGTCTAACT+AGG | + | chr2_1:15482170-15482189 | Msa0197480:intron | 30.0% | |
| TTGTCAAATGTGTCTAACTA+GGG | + | chr2_1:15482171-15482190 | Msa0197480:intron | 30.0% | |
| CTAACTAGGGAAAACATAAT+TGG | + | chr2_1:15482184-15482203 | Msa0197480:intron | 30.0% | |
| GGGAAAACATAATTGGAATT+TGG | + | chr2_1:15482191-15482210 | Msa0197480:intron | 30.0% | |
| TTACTTATTAATTGCACGTC+TGG | - | chr2_1:15482631-15482650 | None:intergenic | 30.0% | |
| GAATTTCTGCAATAACTGTT+TGG | + | chr2_1:15482666-15482685 | Msa0197480:intron | 30.0% | |
| GATCAATGCAAAGTTTAACT+TGG | - | chr2_1:15482763-15482782 | None:intergenic | 30.0% | |
| ATTGTATCAATATACGGTGA+CGG | + | chr2_1:15482817-15482836 | Msa0197480:intron | 30.0% | |
| ! | CTTTGTGTTGATCATCTATA+TGG | + | chr2_1:15483001-15483020 | Msa0197480:CDS | 30.0% |
| GATTTGGATAACAACAATCA+TGG | - | chr2_1:15483045-15483064 | None:intergenic | 30.0% | |
| TGTTGTTATCCAAATCTTCA+TGG | + | chr2_1:15483049-15483068 | Msa0197480:CDS | 30.0% | |
| GACAGATATAATAGATGTCA+CGG | - | chr2_1:15483275-15483294 | None:intergenic | 30.0% | |
| ! | TTTTATTCTAAATCGGATGG+TGG | - | chr2_1:15483351-15483370 | None:intergenic | 30.0% |
| ! | ACTGCAATGCTATTTGTTTA+TGG | + | chr2_1:15483437-15483456 | Msa0197480:CDS | 30.0% |
| !! | ATTCCGACAAGGTTTTATAT+CGG | + | chr2_1:15483495-15483514 | Msa0197480:CDS | 30.0% |
| ! | ATTTTACACCATTGTAAGGA+AGG | + | chr2_1:15483695-15483714 | Msa0197480:intron | 30.0% |
| ! | TTGTCTTCCCTTTTATTGAT+TGG | + | chr2_1:15483733-15483752 | Msa0197480:intron | 30.0% |
| !! | TGTCTTCCCTTTTATTGATT+GGG | + | chr2_1:15483734-15483753 | Msa0197480:intron | 30.0% |
| AAGATGTACAAGTACCAATT+TGG | + | chr2_1:15483794-15483813 | Msa0197480:CDS | 30.0% | |
| AAAATCCCTTCAAAAATGCT+TGG | - | chr2_1:15483881-15483900 | None:intergenic | 30.0% | |
| ! | CAAATGGTTAAGAAGTTTTC+TGG | - | chr2_1:15483953-15483972 | None:intergenic | 30.0% |
| ATAGTATCAAGCAATGCAAA+TGG | - | chr2_1:15483969-15483988 | None:intergenic | 30.0% | |
| TTGCTTGATACTATACTTTG+TGG | + | chr2_1:15483975-15483994 | Msa0197480:intron | 30.0% | |
| AAAAGTTGTTTACATGGATC+AGG | - | chr2_1:15484008-15484027 | None:intergenic | 30.0% | |
| TTTCAGTTAGATTGACTGAA+TGG | + | chr2_1:15484026-15484045 | Msa0197480:intron | 30.0% | |
| ATCCATAATAATCACCTGAA+AGG | + | chr2_1:15484066-15484085 | Msa0197480:intron | 30.0% | |
| ! | ATCCTTTCAGGTGATTATTA+TGG | - | chr2_1:15484071-15484090 | None:intergenic | 30.0% |
| ATAATAATCACCTGAAAGGA+TGG | + | chr2_1:15484070-15484089 | Msa0197480:intron | 30.0% | |
| ATTTACTTAACCATCCTTTC+AGG | - | chr2_1:15484083-15484102 | None:intergenic | 30.0% | |
| AGGAAAAAATTTCTACTGCA+TGG | + | chr2_1:15484217-15484236 | Msa0197480:intron | 30.0% | |
| GGAAAAAATTTCTACTGCAT+GGG | + | chr2_1:15484218-15484237 | Msa0197480:intron | 30.0% | |
| ! | ATGAGGAGAGTATAATTACT+TGG | - | chr2_1:15484250-15484269 | None:intergenic | 30.0% |
| AAGTAATTATACTCTCCTCA+TGG | + | chr2_1:15484249-15484268 | Msa0197480:intron | 30.0% | |
| !! | AGCATAAACTAAGGTATTGA+TGG | + | chr2_1:15484425-15484444 | Msa0197480:intron | 30.0% |
| !! | GCATAAACTAAGGTATTGAT+GGG | + | chr2_1:15484426-15484445 | Msa0197480:intron | 30.0% |
| GAGCAATCAAACAAATGAAA+TGG | + | chr2_1:15484448-15484467 | Msa0197480:intron | 30.0% | |
| TAAATGTCTGTCCGTTTAAA+TGG | + | chr2_1:15484593-15484612 | Msa0197480:intron | 30.0% | |
| AGGCAGTATATCCATTTAAA+CGG | - | chr2_1:15484607-15484626 | None:intergenic | 30.0% | |
| CACACAATCACTTTAAATCT+TGG | - | chr2_1:15484794-15484813 | None:intergenic | 30.0% | |
| TGGAGATAGTTTAATCAATG+GGG | - | chr2_1:15485022-15485041 | None:intergenic | 30.0% | |
| AACTATCTCCAAAGAAAACT+TGG | + | chr2_1:15485031-15485050 | Msa0197480:CDS | 30.0% | |
| ACTATCTCCAAAGAAAACTT+GGG | + | chr2_1:15485032-15485051 | Msa0197480:CDS | 30.0% | |
| TCAATGAAGTTATTCTGAAC+TGG | + | chr2_1:15485215-15485234 | Msa0197480:intron | 30.0% | |
| CTAACACATCACATATTAGT+AGG | + | chr2_1:15485328-15485347 | Msa0197480:intron | 30.0% | |
| TGAAATGAACACAAGTTAGT+TGG | - | chr2_1:15485369-15485388 | None:intergenic | 30.0% | |
| AAATCCTGCATTTAATCCAA+CGG | - | chr2_1:15485403-15485422 | None:intergenic | 30.0% | |
| TTTGCAGTGTATGATTATGT+TGG | + | chr2_1:15485559-15485578 | Msa0197480:intron | 30.0% | |
| TTGCAGTGTATGATTATGTT+GGG | + | chr2_1:15485560-15485579 | Msa0197480:intron | 30.0% | |
| AGGTATCCAAAATGTGTTAT+TGG | - | chr2_1:15485626-15485645 | None:intergenic | 30.0% | |
| GAATTGGAATGTATCTAATC+AGG | + | chr2_1:15485698-15485717 | Msa0197480:intron | 30.0% | |
| ! | TTTTGACCAAGTCAATGATA+CGG | - | chr2_1:15485804-15485823 | None:intergenic | 30.0% |
| AATGAATGGTTCAGATTTGA+TGG | - | chr2_1:15485843-15485862 | None:intergenic | 30.0% | |
| AGAATCGAACTTAGAATGAA+TGG | - | chr2_1:15485857-15485876 | None:intergenic | 30.0% | |
| CTATGTTGATACCTTTCTAA+TGG | - | chr2_1:15485892-15485911 | None:intergenic | 30.0% | |
| !! | CATTAGAAAGGTATCAACAT+AGG | + | chr2_1:15485890-15485909 | Msa0197480:intron | 30.0% |
| !!! | CAAAAGGGCTTTTAAGATAA+AGG | + | chr2_1:15486191-15486210 | Msa0197480:CDS | 30.0% |
| TCACATCTTGATCAGAAAAA+TGG | - | chr2_1:15486233-15486252 | None:intergenic | 30.0% | |
| ! | GGAGGTATAAATAGATTTGA+TGG | + | chr2_1:15486283-15486302 | Msa0197480:intron | 30.0% |
| !!! | TTCCATTTTTTGCAGGATTT+TGG | + | chr2_1:15486310-15486329 | Msa0197480:intron | 30.0% |
| AAAGTAGGTCTGTATATAAC+TGG | - | chr2_1:15486804-15486823 | None:intergenic | 30.0% | |
| AAGTTAAAATGTAGTGAGAG+AGG | - | chr2_1:15486834-15486853 | None:intergenic | 30.0% | |
| TCAGTTCATTATAAGTATGG+GGG | + | chr2_1:15486904-15486923 | Msa0197480:intron | 30.0% | |
| AGAATCAAATAGAAGGAGAA+AGG | - | chr2_1:15487292-15487311 | None:intergenic | 30.0% | |
| TTCTTTCATTTACAAGGGTT+AGG | + | chr2_1:15487308-15487327 | Msa0197480:intron | 30.0% | |
| TCTTTCATTTACAAGGGTTA+GGG | + | chr2_1:15487309-15487328 | Msa0197480:intron | 30.0% | |
| TGGAATATTCAAATAGCCAA+TGG | + | chr2_1:15487509-15487528 | Msa0197480:three_prime_UTR | 30.0% | |
| AAGGAACTGAAAAACAATAC+AGG | - | chr2_1:15487551-15487570 | None:intergenic | 30.0% | |
| !! | TATTGTTTTTCAGTTCCTTG+AGG | + | chr2_1:15487552-15487571 | Msa0197480:three_prime_UTR | 30.0% |
| !! | ATTGTTTTTCAGTTCCTTGA+GGG | + | chr2_1:15487553-15487572 | Msa0197480:three_prime_UTR | 30.0% |
| TGCATTTCGATTCACAATAT+TGG | - | chr2_1:15487680-15487699 | None:intergenic | 30.0% | |
| AATATTGTGAATCGAAATGC+AGG | + | chr2_1:15487679-15487698 | Msa0197480:three_prime_UTR | 30.0% | |
| TAAAAATCTTCACCACCGTT+TGG | + | chr2_1:15481646-15481665 | Msa0197480:intron | 35.0% | |
| TGAAAAATACCTGAGTGAAG+TGG | - | chr2_1:15481768-15481787 | None:intergenic | 35.0% | |
| TGATTCAAGAGCAATGCAAA+AGG | + | chr2_1:15481959-15481978 | Msa0197480:intron | 35.0% | |
| ! | TAAAAGTATAAGGGCTCGTT+TGG | - | chr2_1:15482455-15482474 | None:intergenic | 35.0% |
| ! | TTAAACTTTGCATTGATCCG+AGG | + | chr2_1:15482765-15482784 | Msa0197480:intron | 35.0% |
| ! | ATTGCAATTTTCTCTCTCCT+CGG | - | chr2_1:15482785-15482804 | None:intergenic | 35.0% |
| TTGTATCAATATACGGTGAC+GGG | + | chr2_1:15482818-15482837 | Msa0197480:intron | 35.0% | |
| ATTCTCTTGCCATGAAGATT+TGG | - | chr2_1:15483061-15483080 | None:intergenic | 35.0% | |
| CAATTCAATAGCCTAAATCC+AGG | - | chr2_1:15483125-15483144 | None:intergenic | 35.0% | |
| CTGGATTTAGGCTATTGAAT+TGG | + | chr2_1:15483123-15483142 | Msa0197480:intron | 35.0% | |
| AACTCATTAACCCTTCATCA+AGG | + | chr2_1:15483157-15483176 | Msa0197480:intron | 35.0% | |
| ! | TAATTGGCATATGCCATTTC+AGG | + | chr2_1:15483402-15483421 | Msa0197480:intron | 35.0% |
| !! | TGAAGAAAAAGTGCCTGAAA+TGG | - | chr2_1:15483418-15483437 | None:intergenic | 35.0% |
| TAACACAGTAAATTCCGACA+AGG | + | chr2_1:15483484-15483503 | Msa0197480:CDS | 35.0% | |
| AAGCCGATATAAAACCTTGT+CGG | - | chr2_1:15483501-15483520 | None:intergenic | 35.0% | |
| AACTAGAAACCAAATTTGCC+AGG | - | chr2_1:15483650-15483669 | None:intergenic | 35.0% | |
| ATAAGAGTCCTTCCTTACAA+TGG | - | chr2_1:15483706-15483725 | None:intergenic | 35.0% | |
| !! | GCATTTTTGAAGGGATTTTC+TGG | + | chr2_1:15483882-15483901 | Msa0197480:CDS | 35.0% |
| TTGACTGAATGGTATCTGAT+AGG | + | chr2_1:15484037-15484056 | Msa0197480:intron | 35.0% | |
| ACTGACTGAAGCCTTAAAAT+AGG | + | chr2_1:15484169-15484188 | Msa0197480:intron | 35.0% | |
| AAAAATTTCTACTGCATGGG+AGG | + | chr2_1:15484221-15484240 | Msa0197480:intron | 35.0% | |
| CAAATGAAATGGGAGATATG+AGG | + | chr2_1:15484459-15484478 | Msa0197480:intron | 35.0% | |
| TCTCAGTATATTGGAATCAG+AGG | + | chr2_1:15484569-15484588 | Msa0197480:intron | 35.0% | |
| ATAAATAAGCAATTCTGCGC+AGG | - | chr2_1:15484627-15484646 | None:intergenic | 35.0% | |
| GTGAATAGACGTTAGGAATT+AGG | - | chr2_1:15484655-15484674 | None:intergenic | 35.0% | |
| TATAGTCGTGAATAGACGTT+AGG | - | chr2_1:15484662-15484681 | None:intergenic | 35.0% | |
| ! | GACATTGCTGCTTATATCTT+TGG | + | chr2_1:15484979-15484998 | Msa0197480:CDS | 35.0% |
| !! | AAAACTTGGGAGGGTTTTAT+TGG | + | chr2_1:15485045-15485064 | Msa0197480:CDS | 35.0% |
| !!! | AAACTTGGGAGGGTTTTATT+GGG | + | chr2_1:15485046-15485065 | Msa0197480:CDS | 35.0% |
| AACCATCATATCTGCATTCA+TGG | + | chr2_1:15485080-15485099 | Msa0197480:CDS | 35.0% | |
| !! | TTTGTAGCTTGCTAACATCA+TGG | + | chr2_1:15485265-15485284 | Msa0197480:intron | 35.0% |
| !! | TTGTAGCTTGCTAACATCAT+GGG | + | chr2_1:15485266-15485285 | Msa0197480:intron | 35.0% |
| TAAATGCAGGATTTGTCAAC+TGG | + | chr2_1:15485409-15485428 | Msa0197480:intron | 35.0% | |
| CCAGAATCTTACTCATTGTT+GGG | + | chr2_1:15485466-15485485 | Msa0197480:CDS | 35.0% | |
| AATCTTACTCATTGTTGGGA+TGG | + | chr2_1:15485470-15485489 | Msa0197480:CDS | 35.0% | |
| ACTGCAAAGTAGATACTAGT+AGG | - | chr2_1:15485547-15485566 | None:intergenic | 35.0% | |
| TTGAGTCTACAGAGTCAAAT+TGG | - | chr2_1:15485661-15485680 | None:intergenic | 35.0% | |
| GTATCTAATCAGGACAAAGA+AGG | + | chr2_1:15485708-15485727 | Msa0197480:intron | 35.0% | |
| AATCAGGACAAAGAAGGATA+CGG | + | chr2_1:15485714-15485733 | Msa0197480:intron | 35.0% | |
| AATGATACGGTCTATTGAGT+TGG | - | chr2_1:15485791-15485810 | None:intergenic | 35.0% | |
| ! | AATAGACCGTATCATTGACT+TGG | + | chr2_1:15485795-15485814 | Msa0197480:intron | 35.0% |
| GGTATCAACATAGGATTTGA+AGG | + | chr2_1:15485899-15485918 | Msa0197480:intron | 35.0% | |
| ATAGAACGCTAAACATTCAG+TGG | - | chr2_1:15485941-15485960 | None:intergenic | 35.0% | |
| AGCGTTCTATTTCCATATTG+CGG | + | chr2_1:15485951-15485970 | Msa0197480:intron | 35.0% | |
| TTATAAGCTCAACCGCAATA+TGG | - | chr2_1:15485966-15485985 | None:intergenic | 35.0% | |
| ! | GGATTGGCATCTCATTATTA+CGG | - | chr2_1:15486001-15486020 | None:intergenic | 35.0% |
| AATCCATAAACCTGGAATGT+CGG | + | chr2_1:15486016-15486035 | Msa0197480:intron | 35.0% | |
| GCTTCAATTATTGCACCTTT+CGG | + | chr2_1:15486147-15486166 | Msa0197480:CDS | 35.0% | |
| TCTTTGCAAGTGGTTTCAAA+AGG | + | chr2_1:15486175-15486194 | Msa0197480:CDS | 35.0% | |
| CTTTGCAAGTGGTTTCAAAA+GGG | + | chr2_1:15486176-15486195 | Msa0197480:CDS | 35.0% | |
| CTTGATCAGAAAAATGGAAG+TGG | - | chr2_1:15486227-15486246 | None:intergenic | 35.0% | |
| TTTATACCTCCGACCTAAAT+GGG | - | chr2_1:15486274-15486293 | None:intergenic | 35.0% | |
| ATTTATACCTCCGACCTAAA+TGG | - | chr2_1:15486275-15486294 | None:intergenic | 35.0% | |
| TGAAACATCAAAAGTCTACC+TGG | - | chr2_1:15486381-15486400 | None:intergenic | 35.0% | |
| !! | GTTGGTAATATTTGACTGCT+TGG | + | chr2_1:15486420-15486439 | Msa0197480:intron | 35.0% |
| TGAAAACATGTAGATCTCGT+AGG | + | chr2_1:15486668-15486687 | Msa0197480:intron | 35.0% | |
| TTAAAATGTAGTGAGAGAGG+AGG | - | chr2_1:15486831-15486850 | None:intergenic | 35.0% | |
| !! | TTGACTTGTACATCAAAGCA+GGG | - | chr2_1:15486954-15486973 | None:intergenic | 35.0% |
| !! | TTTGTCGGTTGAGATGATTT+TGG | + | chr2_1:15487060-15487079 | Msa0197480:CDS | 35.0% |
| TGTATTTATGGTGTTTGCAC+TGG | + | chr2_1:15487145-15487164 | Msa0197480:intron | 35.0% | |
| ATTTACAAGGGTTAGGGAAA+AGG | + | chr2_1:15487315-15487334 | Msa0197480:intron | 35.0% | |
| AGTGAAACGAATCAAAGACT+CGG | + | chr2_1:15487361-15487380 | Msa0197480:intron | 35.0% | |
| AGTAGCGAGAGAAACATAAT+GGG | - | chr2_1:15487432-15487451 | None:intergenic | 35.0% | |
| !! | TTGTTTTTCAGTTCCTTGAG+GGG | + | chr2_1:15487554-15487573 | Msa0197480:three_prime_UTR | 35.0% |
| AAATGTTAATACTCCCCTCA+AGG | - | chr2_1:15487570-15487589 | None:intergenic | 35.0% | |
| GCGCTGTTTATTCAGTTAAG+AGG | + | chr2_1:15481585-15481604 | Msa0197480:intron | 40.0% | |
| ! | GCACCTCATTAGAACGTTTT+CGG | - | chr2_1:15482037-15482056 | None:intergenic | 40.0% |
| CCAGAAGTTAGTAAAGCGAA+CGG | + | chr2_1:15482894-15482913 | Msa0197480:CDS | 40.0% | |
| CGAATACGCACGAATTAACA+TGG | - | chr2_1:15482961-15482980 | None:intergenic | 40.0% | |
| TATTCGTCCGTTTGGATGAT+TGG | + | chr2_1:15482975-15482994 | Msa0197480:CDS | 40.0% | |
| ATTCGTCCGTTTGGATGATT+GGG | + | chr2_1:15482976-15482995 | Msa0197480:CDS | 40.0% | |
| AAAGCTCCCAATCATCCAAA+CGG | - | chr2_1:15482985-15483004 | None:intergenic | 40.0% | |
| CAATCATGGCAGTAATGTAG+AGG | - | chr2_1:15483031-15483050 | None:intergenic | 40.0% | |
| ATAATAGATGTCACGGCCTA+TGG | - | chr2_1:15483268-15483287 | None:intergenic | 40.0% | |
| !! | AATCGGATGGTGGATTATGA+CGG | - | chr2_1:15483341-15483360 | None:intergenic | 40.0% |
| TCCCTGTACATTACAGGTAA+CGG | + | chr2_1:15483560-15483579 | Msa0197480:intron | 40.0% | |
| ACCGTTACCTGTAATGTACA+GGG | - | chr2_1:15483564-15483583 | None:intergenic | 40.0% | |
| CCTGAGCCCAATCAATAAAA+GGG | - | chr2_1:15483743-15483762 | None:intergenic | 40.0% | |
| TCCTGAGCCCAATCAATAAA+AGG | - | chr2_1:15483744-15483763 | None:intergenic | 40.0% | |
| GATTGGGCTCAGGATTTATA+TGG | + | chr2_1:15483750-15483769 | Msa0197480:intron | 40.0% | |
| ACCAATTTGGACAGTATGCT+TGG | + | chr2_1:15483807-15483826 | Msa0197480:CDS | 40.0% | |
| TCCAAGCATACTGTCCAAAT+TGG | - | chr2_1:15483811-15483830 | None:intergenic | 40.0% | |
| GCTTGTAAGCTAGATCACTT+CGG | + | chr2_1:15484117-15484136 | Msa0197480:intron | 40.0% | |
| TTCAGTCAGTTCTACGGTTT+GGG | - | chr2_1:15484159-15484178 | None:intergenic | 40.0% | |
| TAAGGCTTCAGTCAGTTCTA+CGG | - | chr2_1:15484165-15484184 | None:intergenic | 40.0% | |
| AGATTAGGGATTGAGCAATG+AGG | + | chr2_1:15484197-15484216 | Msa0197480:intron | 40.0% | |
| ! | TCTCCTCATGGATGACTTTT+CGG | + | chr2_1:15484261-15484280 | Msa0197480:intron | 40.0% |
| TTTCCGAAAAGTCATCCATG+AGG | - | chr2_1:15484267-15484286 | None:intergenic | 40.0% | |
| !!! | AGGATTACTTGCCGACTTTT+CGG | + | chr2_1:15484306-15484325 | Msa0197480:intron | 40.0% |
| ! | TTGATGACAATAAGCGTTGC+TGG | - | chr2_1:15484958-15484977 | None:intergenic | 40.0% |
| ATCTCCAAAGAAAACTTGGG+AGG | + | chr2_1:15485035-15485054 | Msa0197480:CDS | 40.0% | |
| TCTCCAAAGAAAACTTGGGA+GGG | + | chr2_1:15485036-15485055 | Msa0197480:CDS | 40.0% | |
| ! | AAACCCTCCCAAGTTTTCTT+TGG | - | chr2_1:15485042-15485061 | None:intergenic | 40.0% |
| !!! | AACTTGGGAGGGTTTTATTG+GGG | + | chr2_1:15485047-15485066 | Msa0197480:CDS | 40.0% |
| CACCATGAATGCAGATATGA+TGG | - | chr2_1:15485085-15485104 | None:intergenic | 40.0% | |
| TGTTAGAGAGCTACCTTTCT+TGG | - | chr2_1:15485314-15485333 | None:intergenic | 40.0% | |
| ! | TCTGGCTTAAACAGAAAACC+AGG | - | chr2_1:15485451-15485470 | None:intergenic | 40.0% |
| GCCAGAATCTTACTCATTGT+TGG | + | chr2_1:15485465-15485484 | Msa0197480:CDS | 40.0% | |
| CCCAACAATGAGTAAGATTC+TGG | - | chr2_1:15485469-15485488 | None:intergenic | 40.0% | |
| CAAATTGGATGTTGTGTCTG+AGG | - | chr2_1:15485646-15485665 | None:intergenic | 40.0% | |
| ATCAGGACAAAGAAGGATAC+GGG | + | chr2_1:15485715-15485734 | Msa0197480:intron | 40.0% | |
| AACGCTAAACATTCAGTGGT+TGG | - | chr2_1:15485937-15485956 | None:intergenic | 40.0% | |
| GACATTCCAGGTTTATGGAT+TGG | - | chr2_1:15486017-15486036 | None:intergenic | 40.0% | |
| ! | TTATGATTTGCCGACATTCC+AGG | - | chr2_1:15486029-15486048 | None:intergenic | 40.0% |
| AGGATCGATATCTCTTTCCA+AGG | - | chr2_1:15486090-15486109 | None:intergenic | 40.0% | |
| TATCGATCCTACCAGTTCAA+TGG | + | chr2_1:15486100-15486119 | Msa0197480:CDS | 40.0% | |
| CATAAAGCATGCCATTGAAC+TGG | - | chr2_1:15486114-15486133 | None:intergenic | 40.0% | |
| CAATGGCATGCTTTATGTCT+TGG | + | chr2_1:15486117-15486136 | Msa0197480:CDS | 40.0% | |
| TCAATTATTGCACCTTTCGG+AGG | + | chr2_1:15486150-15486169 | Msa0197480:CDS | 40.0% | |
| CGAATATCACCCATTTAGGT+CGG | + | chr2_1:15486262-15486281 | Msa0197480:intron | 40.0% | |
| !!! | TGGGTGTTTCCATTTTTTGC+AGG | + | chr2_1:15486303-15486322 | Msa0197480:intron | 40.0% |
| CGCCAAAATCCTGCAAAAAA+TGG | - | chr2_1:15486315-15486334 | None:intergenic | 40.0% | |
| !! | GATTTTGGCGATAGTATTCC+AGG | + | chr2_1:15486325-15486344 | Msa0197480:CDS | 40.0% |
| ATTGTTGTGAACGTGGTTTC+AGG | + | chr2_1:15486761-15486780 | Msa0197480:intron | 40.0% | |
| TCATTATAAGTATGGGGGAC+TGG | + | chr2_1:15486909-15486928 | Msa0197480:intron | 40.0% | |
| !! | CTTGACTTGTACATCAAAGC+AGG | - | chr2_1:15486955-15486974 | None:intergenic | 40.0% |
| CCATCTACACAAGGACAAAT+TGG | - | chr2_1:15486988-15487007 | None:intergenic | 40.0% | |
| CCAATTTGTCCTTGTGTAGA+TGG | + | chr2_1:15486985-15487004 | Msa0197480:intron | 40.0% | |
| TGTCCTTGTGTAGATGGTTA+TGG | + | chr2_1:15486991-15487010 | Msa0197480:intron | 40.0% | |
| ATCTCAACCGACAAACTTTG+CGG | - | chr2_1:15487055-15487074 | None:intergenic | 40.0% | |
| ! | ATTGATGAGCCTGTCATTTG+AGG | + | chr2_1:15487179-15487198 | Msa0197480:CDS | 40.0% |
| CTTCTTGTTCCTCAAATGAC+AGG | - | chr2_1:15487191-15487210 | None:intergenic | 40.0% | |
| AGGAACAAGAAGCTCTGTAT+CGG | + | chr2_1:15487199-15487218 | Msa0197480:CDS | 40.0% | |
| AGGACAAATACACCTTGCAA+CGG | - | chr2_1:15487272-15487291 | None:intergenic | 40.0% | |
| CAGTAGCGAGAGAAACATAA+TGG | - | chr2_1:15487433-15487452 | None:intergenic | 40.0% | |
| CCAAGATATTGAGTGAGCAA+TGG | - | chr2_1:15487492-15487511 | None:intergenic | 40.0% | |
| CCATTGCTCACTCAATATCT+TGG | + | chr2_1:15487489-15487508 | Msa0197480:three_prime_UTR | 40.0% | |
| ATACCTGAGTGAAGTGGAAG+TGG | - | chr2_1:15481762-15481781 | None:intergenic | 45.0% | |
| CCTGAGGAAGAAGTAGAAGT+AGG | - | chr2_1:15481993-15482012 | None:intergenic | 45.0% | |
| CCTACTTCTACTTCTTCCTC+AGG | + | chr2_1:15481990-15482009 | Msa0197480:CDS | 45.0% | |
| ACTTCTACTTCTTCCTCAGG+AGG | + | chr2_1:15481993-15482012 | Msa0197480:CDS | 45.0% | |
| GCACCGAAAACGTTCTAATG+AGG | + | chr2_1:15482031-15482050 | Msa0197480:CDS | 45.0% | |
| CATTCTGCCAAACTCACCTA+TGG | - | chr2_1:15482514-15482533 | None:intergenic | 45.0% | |
| TTGGGGGTTAAACAAAAGCG+CGG | + | chr2_1:15482572-15482591 | Msa0197480:intron | 45.0% | |
| ! | TTAAACAAAAGCGCGGTCGT+CGG | + | chr2_1:15482579-15482598 | Msa0197480:intron | 45.0% |
| CCGTTCGCTTTACTAACTTC+TGG | - | chr2_1:15482897-15482916 | None:intergenic | 45.0% | |
| GCTTGTCTTCATGAGTTCGA+CGG | - | chr2_1:15483097-15483116 | None:intergenic | 45.0% | |
| ACAAGCAGCTTCCTGGATTT+AGG | + | chr2_1:15483111-15483130 | Msa0197480:intron | 45.0% | |
| ! | AGCGTTGTCAATTTTCGCCA+TGG | + | chr2_1:15483200-15483219 | Msa0197480:intron | 45.0% |
| ! | GTTGTCAATTTTCGCCATGG+AGG | + | chr2_1:15483203-15483222 | Msa0197480:intron | 45.0% |
| CAAAATCTGCCACGCTATGA+CGG | - | chr2_1:15483236-15483255 | None:intergenic | 45.0% | |
| ACGTATTCTGAGTCAACGTC+TGG | + | chr2_1:15483460-15483479 | Msa0197480:CDS | 45.0% | |
| TGCTACTCCCTGTACATTAC+AGG | + | chr2_1:15483554-15483573 | Msa0197480:CDS | 45.0% | |
| CACCGTTACCTGTAATGTAC+AGG | - | chr2_1:15483565-15483584 | None:intergenic | 45.0% | |
| AACCAAATTTGCCAGGCATC+TGG | - | chr2_1:15483643-15483662 | None:intergenic | 45.0% | |
| !! | CCCTTTTATTGATTGGGCTC+AGG | + | chr2_1:15483740-15483759 | Msa0197480:intron | 45.0% |
| ! | ACCGTGCCAAGCATTTTTGA+AGG | + | chr2_1:15483872-15483891 | Msa0197480:CDS | 45.0% |
| CCCTTCAAAAATGCTTGGCA+CGG | - | chr2_1:15483876-15483895 | None:intergenic | 45.0% | |
| ! | CCGTGCCAAGCATTTTTGAA+GGG | + | chr2_1:15483873-15483892 | Msa0197480:CDS | 45.0% |
| CTTCAGTCAGTTCTACGGTT+TGG | - | chr2_1:15484160-15484179 | None:intergenic | 45.0% | |
| AACCCTATGCTCCGAAAAGT+CGG | - | chr2_1:15484320-15484339 | None:intergenic | 45.0% | |
| TTTCACATCATCGACACCGT+TGG | + | chr2_1:15485384-15485403 | Msa0197480:intron | 45.0% | |
| GACACCGTTGGATTAAATGC+AGG | + | chr2_1:15485396-15485415 | Msa0197480:intron | 45.0% | |
| TGCAGGATTTGTCAACTGGT+TGG | + | chr2_1:15485413-15485432 | Msa0197480:intron | 45.0% | |
| !! | GGGTTAGCTCGAAAACAGTT+GGG | + | chr2_1:15485735-15485754 | Msa0197480:intron | 45.0% |
| GAGATGCCAATCCATAAACC+TGG | + | chr2_1:15486008-15486027 | Msa0197480:intron | 45.0% | |
| TTGCCGACATTCCAGGTTTA+TGG | - | chr2_1:15486022-15486041 | None:intergenic | 45.0% | |
| GTTGTCTTGTGCAGTTTCCT+TGG | + | chr2_1:15486070-15486089 | Msa0197480:intron | 45.0% | |
| AAGCATGCCATTGAACTGGT+AGG | - | chr2_1:15486110-15486129 | None:intergenic | 45.0% | |
| CTTGCAAAGAAACCTCCGAA+AGG | - | chr2_1:15486165-15486184 | None:intergenic | 45.0% | |
| TTCGGAGGTTTCTTTGCAAG+TGG | + | chr2_1:15486165-15486184 | Msa0197480:CDS | 45.0% | |
| CGAGCGAATATCACCCATTT+AGG | + | chr2_1:15486258-15486277 | Msa0197480:intron | 45.0% | |
| ATATCACCCATTTAGGTCGG+AGG | + | chr2_1:15486265-15486284 | Msa0197480:intron | 45.0% | |
| GATAGTATTCCAGGACATGG+TGG | + | chr2_1:15486334-15486353 | Msa0197480:CDS | 45.0% | |
| !! | TGGTGGACTTACTGACAGAA+TGG | + | chr2_1:15486351-15486370 | Msa0197480:CDS | 45.0% |
| GTAAAGGCAGCAGCATGTAA+CGG | - | chr2_1:15486864-15486883 | None:intergenic | 45.0% | |
| CATCAAAGCAGGGTCTAGAA+TGG | - | chr2_1:15486944-15486963 | None:intergenic | 45.0% | |
| CTGCCATAACCATCTACACA+AGG | - | chr2_1:15486997-15487016 | None:intergenic | 45.0% | |
| TGTTGTGCCGCAAAGTTTGT+CGG | + | chr2_1:15487045-15487064 | Msa0197480:CDS | 45.0% | |
| ! | GGTTGAGATGATTTTGGACC+AGG | + | chr2_1:15487066-15487085 | Msa0197480:CDS | 45.0% |
| AACAAGAAGCTCTGTATCGG+AGG | + | chr2_1:15487202-15487221 | Msa0197480:CDS | 45.0% | |
| GTTGTCTTAGATCCGTTGCA+AGG | + | chr2_1:15487257-15487276 | Msa0197480:exon | 45.0% | |
| GAAATGCAGGCTGTCACATT+TGG | + | chr2_1:15487692-15487711 | Msa0197480:three_prime_UTR | 45.0% | |
| !! | TATATAAATAAAAACAAAAA+GGG | - | chr2_1:15482101-15482120 | None:intergenic | 5.0% |
| !! | ATATATAAATAAAAACAAAA+AGG | - | chr2_1:15482102-15482121 | None:intergenic | 5.0% |
| !!! | TTTTTTATAAGAATAAATAT+AGG | + | chr2_1:15482238-15482257 | Msa0197480:intron | 5.0% |
| !!! | ATTTTATTTTTATTCTAAAT+CGG | - | chr2_1:15483358-15483377 | None:intergenic | 5.0% |
| !! | AAAAAATTTAAAAGTAAATT+GGG | - | chr2_1:15484693-15484712 | None:intergenic | 5.0% |
| !! | AAAAAAATTTAAAAGTAAAT+TGG | - | chr2_1:15484694-15484713 | None:intergenic | 5.0% |
| TCTACTTCTTCCTCAGGAGG+AGG | + | chr2_1:15481996-15482015 | Msa0197480:CDS | 50.0% | |
| CTTGATGTTGTTGCCGCCAT+AGG | + | chr2_1:15482495-15482514 | Msa0197480:intron | 50.0% | |
| TCTGCCAAACTCACCTATGG+CGG | - | chr2_1:15482511-15482530 | None:intergenic | 50.0% | |
| ! | TAAACAAAAGCGCGGTCGTC+GGG | + | chr2_1:15482580-15482599 | Msa0197480:intron | 50.0% |
| GTTAGTAAAGCGAACGGCAG+CGG | + | chr2_1:15482900-15482919 | Msa0197480:CDS | 50.0% | |
| TTCGTGCGTATTCGTCCGTT+TGG | + | chr2_1:15482967-15482986 | Msa0197480:CDS | 50.0% | |
| CATGAAGACAAGCAGCTTCC+TGG | + | chr2_1:15483104-15483123 | Msa0197480:intron | 50.0% | |
| ! | GATTTTGTGCCAGCTGCCAT+AGG | + | chr2_1:15483249-15483268 | Msa0197480:intron | 50.0% |
| TGCCAGATGCCTGGCAAATT+TGG | + | chr2_1:15483638-15483657 | Msa0197480:intron | 50.0% | |
| AATGCTTGGCACGGTGAAAG+AGG | - | chr2_1:15483867-15483886 | None:intergenic | 50.0% | |
| !!! | TTGCCGACTTTTCGGAGCAT+AGG | + | chr2_1:15484314-15484333 | Msa0197480:intron | 50.0% |
| !!! | TGCCGACTTTTCGGAGCATA+GGG | + | chr2_1:15484315-15484334 | Msa0197480:intron | 50.0% |
| ACATCATGGGTCGTTCTCAG+TGG | + | chr2_1:15485279-15485298 | Msa0197480:CDS | 50.0% | |
| GTGGCTGACATGTCCAAGAA+AGG | + | chr2_1:15485298-15485317 | Msa0197480:CDS | 50.0% | |
| TGTCAAGTGCTTACCCAGTG+AGG | - | chr2_1:15485499-15485518 | None:intergenic | 50.0% | |
| !! | CGGGTTAGCTCGAAAACAGT+TGG | + | chr2_1:15485734-15485753 | Msa0197480:intron | 50.0% |
| GGCGATAGTATTCCAGGACA+TGG | + | chr2_1:15486331-15486350 | Msa0197480:CDS | 50.0% | |
| TCAGTAAGTCCACCATGTCC+TGG | - | chr2_1:15486346-15486365 | None:intergenic | 50.0% | |
| !! | TACTGACAGAATGGACTGCC+AGG | + | chr2_1:15486360-15486379 | Msa0197480:CDS | 50.0% |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr2_1:15486508-15486527 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr2_1:15486507-15486526 | None:intergenic | 50.0% | |
| GAGAGAGGAGGAGCAAAAGT+AGG | - | chr2_1:15486819-15486838 | None:intergenic | 50.0% | |
| GCGGCACAACAAATGACTGA+TGG | - | chr2_1:15487036-15487055 | None:intergenic | 50.0% | |
| AAGCTCTGTATCGGAGGCTT+GGG | + | chr2_1:15487208-15487227 | Msa0197480:CDS | 50.0% | |
| !! | CTTGGGGAAGTGTTGCAACA+AGG | + | chr2_1:15487225-15487244 | Msa0197480:CDS | 50.0% |
| CGTTCTTCTTGAGCTGCCAT+TGG | - | chr2_1:15487528-15487547 | None:intergenic | 50.0% | |
| GCTCCACTTCCACTTCACTC+AGG | + | chr2_1:15481756-15481775 | Msa0197480:CDS | 55.0% | |
| ACTTCTTCCTCAGGAGGAGG+AGG | + | chr2_1:15481999-15482018 | Msa0197480:CDS | 55.0% | |
| AATTCGTCCTCCTCCTCCTG+AGG | - | chr2_1:15482009-15482028 | None:intergenic | 55.0% | |
| CAGGAGGAGGAGGACGAATT+AGG | + | chr2_1:15482009-15482028 | Msa0197480:CDS | 55.0% | |
| GTTGCCGCCATAGGTGAGTT+TGG | + | chr2_1:15482504-15482523 | Msa0197480:intron | 55.0% | |
| CAATGTCTCTGCCAGATGCC+TGG | + | chr2_1:15483629-15483648 | Msa0197480:intron | 55.0% | |
| !! | GGTTGGCTTGACTGTGATCC+TGG | + | chr2_1:15485430-15485449 | Msa0197480:CDS | 55.0% |
| ! | TGTTGGGATGGACTCCTCAC+TGG | + | chr2_1:15485482-15485501 | Msa0197480:CDS | 55.0% |
| ! | GTTGGGATGGACTCCTCACT+GGG | + | chr2_1:15485483-15485502 | Msa0197480:CDS | 55.0% |
| GAGAGAGACAGAGAGAGCTG+TGG | - | chr2_1:15486486-15486505 | None:intergenic | 55.0% | |
| ! | AGGCAGCAGCATGTAACGGA+GGG | - | chr2_1:15486860-15486879 | None:intergenic | 55.0% |
| AAGGCAGCAGCATGTAACGG+AGG | - | chr2_1:15486861-15486880 | None:intergenic | 55.0% | |
| GAAGCTCTGTATCGGAGGCT+TGG | + | chr2_1:15487207-15487226 | Msa0197480:CDS | 55.0% | |
| AGCTCTGTATCGGAGGCTTG+GGG | + | chr2_1:15487209-15487228 | Msa0197480:CDS | 55.0% | |
| GGCGGAAGAAGACGGAGGTT+GGG | - | chr2_1:15481720-15481739 | None:intergenic | 60.0% | |
| TGGAAGTGGAGCTGCGAGAG+CGG | - | chr2_1:15481748-15481767 | None:intergenic | 60.0% | |
| ATGACGGCATGGCACCTCCA+TGG | - | chr2_1:15483220-15483239 | None:intergenic | 60.0% | |
| TCTGCCACGCTATGACGGCA+TGG | - | chr2_1:15483231-15483250 | None:intergenic | 60.0% | |
| ATGTCACGGCCTATGGCAGC+TGG | - | chr2_1:15483261-15483280 | None:intergenic | 60.0% | |
| ! | GGCAGCAGCATGTAACGGAG+GGG | - | chr2_1:15486859-15486878 | None:intergenic | 60.0% |
| CGGCGGAAGAAGACGGAGGT+TGG | - | chr2_1:15481721-15481740 | None:intergenic | 65.0% | |
| TTGGCGGCGGAAGAAGACGG+AGG | - | chr2_1:15481725-15481744 | None:intergenic | 65.0% | |
| CGGTTGGCGGCGGAAGAAGA+CGG | - | chr2_1:15481728-15481747 | None:intergenic | 65.0% | |
| AGTGGAGCTGCGAGAGCGGT+TGG | - | chr2_1:15481744-15481763 | None:intergenic | 65.0% | |
| ! | GGTGCCATGCCGTCATAGCG+TGG | + | chr2_1:15483224-15483243 | Msa0197480:intron | 65.0% |
| GGAGCTGCGAGAGCGGTTGG+CGG | - | chr2_1:15481741-15481760 | None:intergenic | 70.0% | |
| GCTGCGAGAGCGGTTGGCGG+CGG | - | chr2_1:15481738-15481757 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 15481574 | 15487722 | 15481574 | ID=Msa0197480;Name=Msa0197480 |
| chr2_1 | mRNA | 15481574 | 15487722 | 15481574 | ID=Msa0197480-mRNA-1;Parent=Msa0197480;Name=Msa0197480-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.78|0.66|1|0.71|0.53|15|246|438 |
| chr2_1 | exon | 15481574 | 15481582 | 15481574 | ID=Msa0197480-mRNA-1:exon:6490;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15481702 | 15481777 | 15481702 | ID=Msa0197480-mRNA-1:exon:6491;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15481921 | 15481927 | 15481921 | ID=Msa0197480-mRNA-1:exon:6492;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15481968 | 15482052 | 15481968 | ID=Msa0197480-mRNA-1:exon:6493;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15482888 | 15483081 | 15482888 | ID=Msa0197480-mRNA-1:exon:6494;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15483424 | 15483575 | 15483424 | ID=Msa0197480-mRNA-1:exon:6495;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15483762 | 15483903 | 15483762 | ID=Msa0197480-mRNA-1:exon:6496;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15484945 | 15485101 | 15484945 | ID=Msa0197480-mRNA-1:exon:6497;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15485272 | 15485319 | 15485272 | ID=Msa0197480-mRNA-1:exon:6498;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15485418 | 15485504 | 15485418 | ID=Msa0197480-mRNA-1:exon:6499;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15486084 | 15486212 | 15486084 | ID=Msa0197480-mRNA-1:exon:6500;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15486325 | 15486381 | 15486325 | ID=Msa0197480-mRNA-1:exon:6501;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15487004 | 15487087 | 15487004 | ID=Msa0197480-mRNA-1:exon:6502;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15487177 | 15487278 | 15487177 | ID=Msa0197480-mRNA-1:exon:6503;Parent=Msa0197480-mRNA-1 |
| chr2_1 | exon | 15487489 | 15487722 | 15487489 | ID=Msa0197480-mRNA-1:exon:6504;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15481574 | 15481582 | 15481574 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15481702 | 15481777 | 15481702 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15481921 | 15481927 | 15481921 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15481968 | 15482052 | 15481968 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15482888 | 15483081 | 15482888 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15483424 | 15483575 | 15483424 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15483762 | 15483903 | 15483762 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15484945 | 15485101 | 15484945 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15485272 | 15485319 | 15485272 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15485418 | 15485504 | 15485418 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15486084 | 15486212 | 15486084 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15486325 | 15486381 | 15486325 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15487004 | 15487087 | 15487004 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | CDS | 15487177 | 15487266 | 15487177 | ID=Msa0197480-mRNA-1:cds;Parent=Msa0197480-mRNA-1 |
| chr2_1 | three_prime_UTR | 15487267 | 15487278 | 15487267 | ID=Msa0197480-mRNA-1:three_prime_utr;Parent=Msa0197480-mRNA-1 |
| chr2_1 | three_prime_UTR | 15487489 | 15487722 | 15487489 | ID=Msa0197480-mRNA-1:three_prime_utr;Parent=Msa0197480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
