AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0205370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0205370 MtrunA17_Chr2g0303541 99.073 647 6 0 1 647 1 647 0.0 1322
Msa0205370 MtrunA17_Chr2g0285511 54.788 637 255 10 1 634 1 607 0.0 677
Msa0205370 MtrunA17_Chr1g0181181 52.705 573 234 7 1 570 1 539 0.0 601
Msa0205370 MtrunA17_Chr1g0199631 53.131 559 234 11 44 597 8 543 0.0 576
Msa0205370 MtrunA17_Chr2g0320691 45.568 643 321 12 9 636 6 634 0.0 570
Msa0205370 MtrunA17_Chr8g0374011 46.677 662 288 14 8 617 2 650 0.0 560
Msa0205370 MtrunA17_Chr4g0050021 41.946 627 320 10 1 593 19 635 4.36e-157 468
Msa0205370 MtrunA17_Chr2g0279481 37.988 666 364 11 5 631 23 678 9.71e-150 449
Msa0205370 MtrunA17_Chr5g0401341 42.724 536 270 11 1 527 1 508 9.03e-129 393
Msa0205370 MtrunA17_Chr4g0010091 39.049 589 305 9 15 584 23 576 1.75e-128 392
Msa0205370 MtrunA17_Chr5g0401451 38.069 549 312 10 15 561 29 551 1.20e-124 382
Msa0205370 MtrunA17_Chr7g0268781 37.914 604 328 12 15 599 26 601 1.05e-123 380
Msa0205370 MtrunA17_Chr1g0195911 38.448 580 303 12 15 573 26 572 1.16e-122 377
Msa0205370 MtrunA17_Chr7g0245201 39.344 549 296 10 29 569 64 583 4.33e-122 376
Msa0205370 MtrunA17_Chr8g0382231 32.958 622 342 10 10 607 37 607 1.07e-116 362
Msa0205370 MtrunA17_Chr1g0207461 39.227 543 297 9 1 535 1 518 1.79e-116 361
Msa0205370 MtrunA17_Chr1g0150191 35.974 606 350 11 1 594 1 580 1.54e-115 358
Msa0205370 MtrunA17_Chr3g0108331 36.239 585 313 12 12 594 11 537 2.22e-112 348
Msa0205370 MtrunA17_Chr4g0053841 35.326 552 327 9 15 562 2 527 2.25e-112 350
Msa0205370 MtrunA17_Chr5g0432861 33.901 587 332 9 12 594 12 546 1.76e-105 331
Msa0205370 MtrunA17_Chr8g0367891 37.963 540 272 9 1 518 1 499 9.29e-102 322
Msa0205370 MtrunA17_Chr4g0076521 36.706 504 285 10 1 501 1 473 1.56e-100 319
Msa0205370 MtrunA17_Chr5g0412591 37.500 536 263 11 1 507 1 493 2.75e-100 318
Msa0205370 MtrunA17_Chr1g0191711 32.738 504 279 8 10 510 42 488 8.81e-92 295
Msa0205370 MtrunA17_Chr2g0290741 34.462 502 289 10 1 501 1 463 1.68e-83 273
Msa0205370 MtrunA17_Chr4g0003891 34.031 382 218 5 207 580 38 393 2.94e-66 224
Msa0205370 MtrunA17_Chr4g0023801 30.088 565 335 13 35 582 14 535 4.17e-61 213
Msa0205370 MtrunA17_Chr2g0332281 33.679 386 221 6 215 594 24 380 4.72e-61 209
Msa0205370 MtrunA17_Chr1g0163311 27.886 563 327 15 39 576 17 525 1.14e-55 197
Msa0205370 MtrunA17_Chr4g0037661 30.097 515 302 13 65 562 45 518 7.62e-51 185
Msa0205370 MtrunA17_Chr2g0280541 26.303 403 246 8 93 489 1 358 2.36e-30 124
Msa0205370 MtrunA17_Chr1g0206621 38.571 140 85 1 30 168 72 211 6.20e-30 118
Msa0205370 MtrunA17_Chr1g0199641 62.791 43 16 0 1 43 1 43 5.70e-16 72.4
Msa0205370 MtrunA17_Chr5g0401181 30.667 150 93 4 19 167 43 182 1.83e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0205370 AT1G30440.1 74.320 662 144 10 1 636 1 662 0.0 971
Msa0205370 AT5G03250.1 55.502 618 231 14 1 606 1 586 0.0 663
Msa0205370 AT5G13600.1 52.932 614 247 13 1 607 1 579 0.0 582
Msa0205370 AT3G44820.1 49.147 586 271 8 8 573 5 583 0.0 566
Msa0205370 AT5G66560.1 44.362 674 273 16 16 609 9 660 0.0 531
Msa0205370 AT5G03250.2 52.964 506 195 13 112 606 1 474 3.64e-175 507
Msa0205370 AT5G66560.3 43.405 652 269 15 37 609 1 631 1.73e-167 493
Msa0205370 AT5G66560.4 46.194 578 252 14 69 609 66 621 3.78e-164 484
Msa0205370 AT3G50840.1 42.404 599 296 12 16 609 5 559 1.57e-154 457
Msa0205370 AT3G50840.2 40.917 567 287 11 47 609 1 523 1.05e-136 410
Msa0205370 AT3G50840.3 40.917 567 287 11 47 609 1 523 1.05e-136 410
Msa0205370 AT5G48800.1 39.899 594 297 11 15 594 30 577 3.39e-128 392
Msa0205370 AT5G66560.2 44.106 492 199 12 16 452 9 479 3.92e-123 374
Msa0205370 AT3G08570.1 37.983 595 329 11 29 611 37 603 1.09e-116 362
Msa0205370 AT3G08660.1 37.069 580 297 13 24 594 32 552 3.80e-116 359
Msa0205370 AT5G67385.1 37.450 502 283 6 10 510 10 481 1.00e-115 359
Msa0205370 AT5G10250.2 35.526 608 313 11 10 593 34 586 3.68e-115 358
Msa0205370 AT1G03010.1 37.205 594 321 14 5 573 16 582 7.32e-114 355
Msa0205370 AT1G03010.2 37.739 575 307 13 24 573 7 555 2.03e-113 353
Msa0205370 AT1G03010.3 37.739 575 307 13 24 573 33 581 5.95e-113 353
Msa0205370 AT5G10250.1 35.284 598 313 12 10 593 34 571 2.18e-109 342
Msa0205370 AT1G67900.5 39.771 523 277 8 1 501 1 507 1.69e-108 341
Msa0205370 AT1G67900.1 39.771 523 277 8 1 501 1 507 1.69e-108 341
Msa0205370 AT1G67900.3 39.771 523 277 8 1 501 1 507 1.69e-108 341
Msa0205370 AT1G67900.6 39.771 523 277 8 1 501 1 507 1.69e-108 341
Msa0205370 AT1G67900.2 39.771 523 277 8 1 501 1 507 1.69e-108 341
Msa0205370 AT1G67900.4 39.771 523 277 8 1 501 1 507 1.69e-108 341
Msa0205370 AT3G08660.3 37.127 536 271 12 68 594 14 492 3.58e-107 334
Msa0205370 AT4G37590.1 38.580 521 246 12 1 503 1 465 6.15e-107 335
Msa0205370 AT4G31820.1 38.986 513 258 15 1 503 1 468 3.39e-105 330
Msa0205370 AT5G67440.3 38.552 511 277 10 1 506 1 479 6.84e-105 330
Msa0205370 AT5G67440.1 38.552 511 277 10 1 506 1 479 6.84e-105 330
Msa0205370 AT2G47860.1 35.253 573 315 10 23 573 34 572 1.68e-104 331
Msa0205370 AT2G30520.1 34.397 564 317 8 4 562 9 524 7.92e-104 328
Msa0205370 AT5G67385.4 36.774 465 264 5 47 510 1 436 6.16e-103 324
Msa0205370 AT5G67385.5 36.774 465 264 5 47 510 1 436 6.16e-103 324
Msa0205370 AT5G67385.2 36.774 465 264 5 47 510 1 436 6.16e-103 324
Msa0205370 AT5G67385.3 36.774 465 264 5 47 510 1 436 6.16e-103 324
Msa0205370 AT2G23050.1 37.620 521 250 13 1 510 1 457 9.34e-102 318
Msa0205370 AT2G14820.2 35.275 618 350 15 1 600 1 586 1.24e-101 323
Msa0205370 AT2G14820.1 35.275 618 350 15 1 600 1 586 1.24e-101 323
Msa0205370 AT2G47860.3 33.893 596 315 11 23 573 34 595 3.28e-99 317
Msa0205370 AT5G47800.3 35.984 503 291 9 1 501 1 474 1.08e-95 305
Msa0205370 AT5G47800.1 35.984 503 291 9 1 501 1 474 1.08e-95 305
Msa0205370 AT5G47800.4 35.984 503 291 9 1 501 1 474 1.08e-95 305
Msa0205370 AT5G47800.2 35.984 503 291 9 1 501 114 587 5.77e-94 304
Msa0205370 AT5G67440.2 37.553 474 260 9 37 506 1 442 7.54e-92 295
Msa0205370 AT3G26490.1 36.158 531 283 10 1 501 1 505 6.33e-91 294
Msa0205370 AT3G26490.3 36.158 531 283 10 1 501 1 505 6.33e-91 294
Msa0205370 AT3G26490.4 36.158 531 283 10 1 501 1 505 6.33e-91 294
Msa0205370 AT3G49970.1 33.396 530 270 11 36 563 4 452 2.22e-90 290
Msa0205370 AT3G49970.2 33.396 530 270 11 36 563 4 452 2.22e-90 290
Msa0205370 AT2G30520.2 33.716 522 294 7 46 562 2 476 8.85e-90 290
Msa0205370 AT2G30520.3 33.716 522 294 7 46 562 2 476 8.85e-90 290
Msa0205370 AT4G31820.2 37.826 460 232 14 53 503 1 415 3.33e-85 276
Msa0205370 AT3G08660.2 35.520 442 228 10 24 459 32 422 3.51e-79 258
Msa0205370 AT5G64330.1 42.773 339 167 2 282 593 369 707 1.90e-76 259
Msa0205370 AT5G64330.1 41.901 284 141 5 7 275 33 307 3.82e-64 226
Msa0205370 AT2G47860.5 34.091 484 267 9 112 573 1 454 3.43e-74 248
Msa0205370 AT2G47860.2 34.091 484 267 9 112 573 1 454 3.43e-74 248
Msa0205370 AT2G47860.4 34.000 450 252 8 15 452 27 443 5.31e-72 239
Msa0205370 AT3G26490.2 34.440 482 260 11 1 452 1 456 8.11e-69 233
Msa0205370 AT2G23050.2 35.802 405 190 11 112 510 1 341 9.17e-68 226
Msa0205370 AT5G64330.3 48.988 247 111 1 282 513 310 556 2.36e-67 231
Msa0205370 AT5G64330.3 39.683 252 128 5 39 275 6 248 6.05e-47 175
Msa0205370 AT5G64330.2 48.988 247 111 1 282 513 369 615 5.40e-67 232
Msa0205370 AT5G64330.2 41.901 284 141 5 7 275 33 307 1.19e-64 226
Msa0205370 AT2G47860.6 32.347 473 252 9 15 452 27 466 5.68e-67 227
Msa0205370 AT3G15570.1 33.882 425 226 9 215 615 29 422 1.21e-62 215
Msa0205370 AT3G03510.1 30.347 547 270 18 81 617 8 453 8.54e-61 210
Msa0205370 AT5G17580.2 31.148 488 284 10 28 509 22 463 1.06e-59 210
Msa0205370 AT5G17580.1 31.148 488 284 10 28 509 7 448 1.43e-59 209
Msa0205370 AT1G52770.1 33.578 408 211 10 215 596 28 401 1.94e-57 201
Msa0205370 AT3G19850.1 28.049 492 298 8 35 506 13 468 7.39e-54 194
Msa0205370 AT1G50280.1 29.228 479 292 8 35 497 13 460 2.49e-53 191
Msa0205370 AT3G22104.1 28.905 557 306 12 28 572 6 484 9.62e-53 189
Msa0205370 AT1G50280.2 30.090 442 266 7 68 497 17 427 1.55e-52 188
Msa0205370 AT5G48130.1 28.626 524 290 13 19 521 32 492 1.82e-52 191
Msa0205370 AT3G22104.4 28.454 485 259 10 98 572 3 409 2.68e-39 150
Msa0205370 AT3G22104.2 28.454 485 259 10 98 572 3 409 2.68e-39 150
Msa0205370 AT3G22104.3 28.454 485 259 10 98 572 3 409 2.68e-39 150
Msa0205370 AT3G49900.1 31.844 179 97 5 420 580 222 393 3.94e-14 75.9
Msa0205370 AT3G49900.1 34.839 155 90 4 18 167 57 205 8.22e-14 74.7
Msa0205370 AT3G49900.2 34.839 155 90 4 18 167 57 205 8.50e-14 74.7
Msa0205370 AT3G49900.2 31.319 182 97 6 420 580 222 396 2.05e-12 70.5

Find 217 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACTGACCCAAATTTATT+TGG 0.101313 2_1:-32079195 Msa0205370:CDS
CTCAATGGCTTGTGTGAAAT+TGG 0.160033 2_1:-32081233 Msa0205370:exon
ACCGGCCACCCAAATAAATT+TGG 0.169719 2_1:+32079186 None:intergenic
TTTCTAAAGGTTGAGTCTTT+TGG 0.204015 2_1:-32081321 Msa0205370:five_prime_UTR
TCCATTGAATACGAGAAATT+TGG 0.207917 2_1:+32078667 None:intergenic
CTATGAGTTGTCAATTGTTT+TGG 0.248973 2_1:-32081594 Msa0205370:five_prime_UTR
CAATCTAAACTTGTATTCTT+TGG 0.250976 2_1:+32079090 None:intergenic
GAGGACCACTTGATTGAAAA+AGG 0.277475 2_1:+32079329 None:intergenic
TCAAACTTGTGACGATGTTC+TGG 0.285072 2_1:-32079277 Msa0205370:CDS
TTAAATCGACGTAAGGTTTC+CGG 0.287229 2_1:-32078934 Msa0205370:CDS
CCGACTTGCCCCGGCGGCTT+TGG 0.300388 2_1:-32078899 Msa0205370:CDS
CAATTGAATGGAGTGGTTCT+AGG 0.303169 2_1:-32081425 Msa0205370:five_prime_UTR
ACAAGTTTGAAGTGCCCTTA+TGG 0.308771 2_1:+32079290 None:intergenic
CTTGCCATGGATCAGATTAC+AGG 0.311344 2_1:-32078598 Msa0205370:CDS
CGCAACGAGTTCGAATGTTT+TGG 0.316011 2_1:+32079476 None:intergenic
CGCAGCAAGGGCTTGAAACT+TGG 0.320695 2_1:+32078441 None:intergenic
CCCCTCCTGCATATCAAGTT+TGG 0.330467 2_1:-32078743 Msa0205370:CDS
TTTATTTATTTGTTAGTTAG+TGG 0.332725 2_1:-32081674 Msa0205370:five_prime_UTR
TCATCAAGCACTAACTTAAC+TGG 0.333054 2_1:+32081822 None:intergenic
TTCCTCTGATTCAGAAGCTT+TGG 0.343310 2_1:+32079536 None:intergenic
GCAGCTTGATCAAGCTGCTT+TGG 0.352308 2_1:-32078704 Msa0205370:CDS
TTTATTTGGGTGGCCGGTAT+TGG 0.353243 2_1:-32079181 Msa0205370:CDS
AAGAAATTTAAGAAGTGGTT+TGG 0.359275 2_1:-32077369 Msa0205370:CDS
GCTCTCTAGAAGCGGAGTTT+TGG 0.362369 2_1:-32079571 Msa0205370:CDS
TCCAGAGTATGCCAGGCCTT+TGG 0.363293 2_1:-32078413 Msa0205370:CDS
AACTTGAACTATGATTCTAA+TGG 0.368718 2_1:+32077466 None:intergenic
TATCTAATCAACCCTAGTTT+AGG 0.369332 2_1:+32081541 None:intergenic
CCACTGACCCAAATTTATTT+GGG 0.370052 2_1:-32079194 Msa0205370:CDS
ACTTGAACTATGATTCTAAT+GGG 0.375360 2_1:+32077467 None:intergenic
CTTGGTTGTTGACCTAAACT+AGG 0.378140 2_1:-32081553 Msa0205370:five_prime_UTR
AGCTGATGCATTTCAGCGTC+AGG 0.382481 2_1:-32081203 Msa0205370:CDS
TACCTTCAAGTAAATATCTA+TGG 0.383467 2_1:+32078372 None:intergenic
AGCACATGGGCAAGCATTCT+AGG 0.384227 2_1:-32082004 Msa0205370:five_prime_UTR
GACCAAACAGGAACTTCGTT+TGG 0.385712 2_1:+32078797 None:intergenic
TCATGGAATCTCGGGGCATT+AGG 0.390977 2_1:-32079011 Msa0205370:CDS
GCCAAATTTCTCGTATTCAA+TGG 0.392041 2_1:-32078668 Msa0205370:CDS
CGGATCAAACGAGGGTGGTT+GGG 0.392388 2_1:-32077345 Msa0205370:CDS
TGCCATAGATATTTACTTGA+AGG 0.393378 2_1:-32078374 Msa0205370:intron
CTTGAAATGACTGAGGAATA+TGG 0.395110 2_1:-32079381 Msa0205370:CDS
CAAAGCCGCCGGGGCAAGTC+GGG 0.402893 2_1:+32078900 None:intergenic
AACTATATCGCTGGGAAGCC+CGG 0.414122 2_1:+32080190 None:intergenic
AGGATCATCAACAAGCGCTT+GGG 0.416229 2_1:-32077195 Msa0205370:CDS
TCAATGGCTTGTGTGAAATT+GGG 0.416612 2_1:-32081232 Msa0205370:CDS
CCCAAATTTATTTGGGTGGC+CGG 0.418612 2_1:-32079187 Msa0205370:CDS
GCTATCAACCTCTTATAAAT+CGG 0.425936 2_1:+32079036 None:intergenic
TGAGTTTACCGATTTATAAG+AGG 0.428569 2_1:-32079044 Msa0205370:CDS
ATTGAAAGAAGGTACATTGT+TGG 0.429277 2_1:-32081289 Msa0205370:five_prime_UTR
CCATCCCTACTTTCAATACC+TGG 0.430767 2_1:+32077303 None:intergenic
CGCCGGGGCAAGTCGGGTAC+TGG 0.433152 2_1:+32078906 None:intergenic
CCGGCCACCCAAATAAATTT+GGG 0.435121 2_1:+32079187 None:intergenic
ATACACCTTCACGACATTCC+TGG 0.435479 2_1:-32079504 Msa0205370:CDS
AAGAGAGAGAGAACAATGAA+TGG 0.444008 2_1:+32081858 None:intergenic
AACTTCAACAACTATATCGC+TGG 0.445402 2_1:+32080181 None:intergenic
AGAGCAACTATGCAGGCTAA+TGG 0.445791 2_1:-32077546 Msa0205370:CDS
GTCCAAACGAAGTTCCTGTT+TGG 0.445857 2_1:-32078799 Msa0205370:CDS
TAACATATACCTTGTGAAGA+TGG 0.448559 2_1:+32080144 None:intergenic
CAAAGAATACAAGTTTAGAT+TGG 0.448924 2_1:-32079089 Msa0205370:CDS
TATGCCAGGCCTTTGGATGA+TGG 0.451109 2_1:-32078406 Msa0205370:CDS
AGCATAGAAAGCAAGAGAAC+CGG 0.452027 2_1:+32078975 None:intergenic
GCGAAGGTGATCCGATCAAC+TGG 0.452879 2_1:+32078542 None:intergenic
TCTTGATCATTTCCTTGCCA+TGG 0.453035 2_1:-32078611 Msa0205370:CDS
GATAGCTGTCATGGAATCTC+GGG 0.454848 2_1:-32079019 Msa0205370:CDS
CATTGAATCGCTTGCAGCAA+AGG 0.455623 2_1:-32079220 Msa0205370:CDS
GGATTTCATTTGTTTAATGT+TGG 0.456368 2_1:+32081950 None:intergenic
ATCAAGTGGTCCTCCGAAGT+TGG 0.458366 2_1:-32079320 Msa0205370:CDS
TATGCTAAAACGTATTTGCC+TGG 0.462210 2_1:-32078958 Msa0205370:CDS
GAAAACCAGGTATTGAAAGT+AGG 0.462978 2_1:-32077308 Msa0205370:CDS
GAAGTTGGAAAGACTCCATA+AGG 0.464124 2_1:-32079305 Msa0205370:CDS
GGATGGATAACATGAGGATG+AGG 0.466944 2_1:-32077286 Msa0205370:CDS
AGAGAGAACAATGAATGGAA+TGG 0.467618 2_1:+32081863 None:intergenic
TCTCATAGGTTCTGTACGAC+CGG 0.467993 2_1:-32080209 Msa0205370:intron
ATTAGGCAGGAAATCATTGC+CGG 0.470715 2_1:-32078994 Msa0205370:CDS
ATGCTTCTAATGAGAGCTTC+TGG 0.471327 2_1:+32077519 None:intergenic
CTCAATACATTCACCTGAGA+TGG 0.471645 2_1:+32076920 None:intergenic
AATTGAATGGAGTGGTTCTA+GGG 0.473497 2_1:-32081424 Msa0205370:five_prime_UTR
AAACTTGGTGGTAAGGCAAA+AGG 0.474024 2_1:-32077215 Msa0205370:CDS
TCCAAAGGCCTGGCATACTC+TGG 0.474498 2_1:+32078412 None:intergenic
CGGCTGTTCCAGAGTATGCC+AGG 0.480333 2_1:-32078420 Msa0205370:CDS
CTTTCTGACTCCACCAACCA+TGG 0.480617 2_1:+32077569 None:intergenic
CTCTGGAACAGCCGCAGCAA+GGG 0.483062 2_1:+32078429 None:intergenic
GATTGAGAAACTTGGTGGTA+AGG 0.484108 2_1:-32077222 Msa0205370:CDS
TTGTGGAATGGAATAAGTAC+TGG 0.484290 2_1:-32079120 Msa0205370:CDS
CTCCGCTTCTAGAGAGCAAA+GGG 0.485842 2_1:+32079577 None:intergenic
TCGGATCAAACGAGGGTGGT+TGG 0.485977 2_1:-32077346 Msa0205370:CDS
CTGTTAGCAAACAGAACAAT+GGG 0.486456 2_1:-32077109 Msa0205370:CDS
GGGGAATTGGAATTGAAAGA+AGG 0.486570 2_1:-32081300 Msa0205370:five_prime_UTR
AAGGATCATCAACAAGCGCT+TGG 0.487581 2_1:-32077196 Msa0205370:CDS
GCATATCAAGTTTGGAGAAA+CGG 0.488053 2_1:-32078735 Msa0205370:CDS
GATGAAGATGGCCAGTTGAT+CGG 0.488805 2_1:-32078553 Msa0205370:CDS
TTTCTCCAAACTTGATATGC+AGG 0.489280 2_1:+32078738 None:intergenic
TGGACCAGGCCCTTCTGCAT+TGG 0.490474 2_1:+32078817 None:intergenic
AATTTAAGAAGTGGTTTGGT+CGG 0.490890 2_1:-32077365 Msa0205370:CDS
GGTGGTCCCTTGCAGAGCCC+TGG 0.491765 2_1:-32079153 Msa0205370:CDS
CCTTTCGTTCTGTGCAGCGT+GGG 0.492384 2_1:+32077493 None:intergenic
CCCAAATAAATTTGGGTCAG+TGG 0.499752 2_1:+32079194 None:intergenic
TGATAGCTGTCATGGAATCT+CGG 0.500109 2_1:-32079020 Msa0205370:CDS
AAAACCAGGTATTGAAAGTA+GGG 0.500447 2_1:-32077307 Msa0205370:CDS
GGAATCTCGGGGCATTAGGC+AGG 0.501114 2_1:-32079007 Msa0205370:CDS
CATCAAATGTTGTGTGCCTA+TGG 0.501250 2_1:-32079419 Msa0205370:CDS
CAGCTTCGTACTTCAATCGC+TGG 0.502548 2_1:-32077425 Msa0205370:CDS
GCCTGGTTTAAATCGACGTA+AGG 0.502553 2_1:-32078941 Msa0205370:CDS
CAATGTGAAGCTCTTCAGCT+TGG 0.502575 2_1:+32079253 None:intergenic
ACTTCCAATGCAGAAGGGCC+TGG 0.503073 2_1:-32078821 Msa0205370:CDS
GCAGCAAGGGCTTGAAACTT+GGG 0.505459 2_1:+32078442 None:intergenic
TAAGAGGTTGATAGCTGTCA+TGG 0.506296 2_1:-32079028 Msa0205370:CDS
CCGTTCGAAGTAGACCAAAC+AGG 0.506791 2_1:+32078785 None:intergenic
AGAATACAAGTTTAGATTGG+TGG 0.508754 2_1:-32079086 Msa0205370:CDS
TTATGGAGTCTTTCCAACTT+CGG 0.509653 2_1:+32079307 None:intergenic
GGACCACCACGCTCCAATAC+CGG 0.510887 2_1:+32079168 None:intergenic
ACTCTGGAACAGCCGCAGCA+AGG 0.514323 2_1:+32078428 None:intergenic
CAGAAAGAGAGCAACTATGC+AGG 0.514538 2_1:-32077553 Msa0205370:CDS
TGTTTAATGTTGGTGTGTGT+CGG 0.514695 2_1:+32081960 None:intergenic
GGAGTTGTGTCGAAGAAACT+CGG 0.516025 2_1:-32077173 Msa0205370:CDS
CAATTTCACACAAGCCATTG+AGG 0.516370 2_1:+32081234 None:intergenic
TTCAGCGTCAGGGCCAAGCC+TGG 0.517024 2_1:-32081192 Msa0205370:intron
AGCGATATAGTTGTTGAAGT+TGG 0.517502 2_1:-32080179 Msa0205370:CDS
TTCCCTTTGCTCTCTAGAAG+CGG 0.518687 2_1:-32079579 Msa0205370:CDS
TTTATTTGTTAGTTAGTGGA+AGG 0.525800 2_1:-32081670 Msa0205370:five_prime_UTR
CCAAAGCCGCCGGGGCAAGT+CGG 0.525938 2_1:+32078899 None:intergenic
TGGTTGGGCATCGGCAGTCA+AGG 0.526041 2_1:-32077330 Msa0205370:CDS
CCTGTTTGGTCTACTTCGAA+CGG 0.529380 2_1:-32078785 Msa0205370:CDS
GTGGAGATACCAAAGCCGCC+GGG 0.530973 2_1:+32078890 None:intergenic
CAGCGATTGAAGTACGAAGC+TGG 0.532519 2_1:+32077426 None:intergenic
GATGGATAACATGAGGATGA+GGG 0.535092 2_1:-32077285 Msa0205370:CDS
CCAGGTATTGAAAGTAGGGA+TGG 0.537431 2_1:-32077303 Msa0205370:CDS
GGTGGAGATACCAAAGCCGC+CGG 0.537880 2_1:+32078889 None:intergenic
CCCACGCTGCACAGAACGAA+AGG 0.539393 2_1:-32077493 Msa0205370:CDS
TAAACCATCATCCAAAGGCC+TGG 0.541161 2_1:+32078402 None:intergenic
ATGAAAGAAAACAGCACATG+TGG 0.541838 2_1:+32081739 None:intergenic
GCCTTTCGTTCTGTGCAGCG+TGG 0.543457 2_1:+32077492 None:intergenic
TTGGTTGTTGACCTAAACTA+GGG 0.549392 2_1:-32081552 Msa0205370:five_prime_UTR
CTCATAGGTTCTGTACGACC+GGG 0.549451 2_1:-32080208 Msa0205370:intron
CGGTGTGAAACTCGAACTTA+CGG 0.550607 2_1:-32079442 Msa0205370:CDS
ATGGTGGCAAAACTGATTGA+TGG 0.550952 2_1:-32078505 Msa0205370:CDS
CCATGCTCGATTGATGAAGA+TGG 0.551203 2_1:-32078565 Msa0205370:CDS
GGATCAAGAAATTTAAGAAG+TGG 0.552744 2_1:-32077374 Msa0205370:CDS
AAACGAGGGTGGTTGGGCAT+CGG 0.554780 2_1:-32077339 Msa0205370:CDS
TAACAAACAATTGAATGGAG+TGG 0.555299 2_1:-32081432 Msa0205370:five_prime_UTR
GTAGTCTCACCCATGGTTGG+TGG 0.556559 2_1:-32077579 Msa0205370:intron
CTCAGGTGAATGTATTGAGA+TGG 0.556604 2_1:-32076916 Msa0205370:three_prime_UTR
ACCTTCACGACATTCCTGGT+GGG 0.557201 2_1:-32079500 Msa0205370:CDS
GGGTGGCCGGTATTGGAGCG+TGG 0.558111 2_1:-32079174 Msa0205370:CDS
GGGGTTCACTCGTAAAATCA+TGG 0.558705 2_1:+32078762 None:intergenic
GGTCCCTTGCAGAGCCCTGG+TGG 0.559347 2_1:-32079150 Msa0205370:CDS
GTCCAGTACCCGACTTGCCC+CGG 0.560240 2_1:-32078908 Msa0205370:CDS
GGTAGTAGTGCACAAGCACA+TGG 0.562021 2_1:-32082018 None:intergenic
AGGCAAGAGATTGAGAAACT+TGG 0.562530 2_1:-32077230 Msa0205370:CDS
CAAGAGATTGAGAAACTTGG+TGG 0.566917 2_1:-32077227 Msa0205370:CDS
CTGACCCAAATTTATTTGGG+TGG 0.567317 2_1:-32079191 Msa0205370:CDS
ACAGGAACTTCGTTTGGACC+AGG 0.567444 2_1:+32078803 None:intergenic
TGCCAAAGCTTCTGAATCAG+AGG 0.579982 2_1:-32079538 Msa0205370:CDS
TCCAAACTTGATATGCAGGA+GGG 0.581282 2_1:+32078742 None:intergenic
AATGTAGTCTCACCCATGGT+TGG 0.581677 2_1:-32077582 Msa0205370:intron
TTTCTGACTCCACCAACCAT+GGG 0.582257 2_1:+32077570 None:intergenic
TAATAATGTTGAGAAGTTGA+AGG 0.585065 2_1:-32077084 Msa0205370:CDS
CTCGTTGCGAAATTCTGCTA+CGG 0.587567 2_1:-32079462 Msa0205370:CDS
ACTTCCACCAGGGCTCTGCA+AGG 0.589029 2_1:+32079146 None:intergenic
GGATCATCAACAAGCGCTTG+GGG 0.592474 2_1:-32077194 Msa0205370:CDS
CTCCAAACTTGATATGCAGG+AGG 0.592638 2_1:+32078741 None:intergenic
TGAAAGAAAACAGCACATGT+GGG 0.594118 2_1:+32081740 None:intergenic
CCATCTTCATCAATCGAGCA+TGG 0.594471 2_1:+32078565 None:intergenic
TTCCACAAAACACTTCCACC+AGG 0.597710 2_1:+32079135 None:intergenic
TCAACTACTTCCAATGCAGA+AGG 0.600159 2_1:-32078827 Msa0205370:CDS
TGGAGTCTTTCCAACTTCGG+AGG 0.600586 2_1:+32079310 None:intergenic
GAGTTGTGTCGAAGAAACTC+GGG 0.601000 2_1:-32077172 Msa0205370:CDS
CCAAACTTGATATGCAGGAG+GGG 0.601427 2_1:+32078743 None:intergenic
ATGTATTGAGATGGAAATGA+AGG 0.602135 2_1:-32076907 Msa0205370:three_prime_UTR
ACTCCGCTTCTAGAGAGCAA+AGG 0.602649 2_1:+32079576 None:intergenic
TGTGGAATGGAATAAGTACT+GGG 0.603289 2_1:-32079119 Msa0205370:CDS
ACCACCTGTAATCTGATCCA+TGG 0.603327 2_1:+32078594 None:intergenic
AAGTCGGGTACTGGACTCAC+CGG 0.604525 2_1:+32078915 None:intergenic
ACTTCAACAACTATATCGCT+GGG 0.604586 2_1:+32080182 None:intergenic
CAGATGTGTAGTGCTCAAGA+AGG 0.607122 2_1:-32077134 Msa0205370:CDS
AAGAGCTTCACATTGTGAAG+AGG 0.607716 2_1:-32079245 Msa0205370:CDS
CTTCCACCAGGGCTCTGCAA+GGG 0.608990 2_1:+32079147 None:intergenic
ATCGGCAGTCAAGGAAAACC+AGG 0.614963 2_1:-32077321 Msa0205370:CDS
AGTTCTTCTATCAGTGACAA+AGG 0.615429 2_1:-32077038 Msa0205370:CDS
CACCTTCACGACATTCCTGG+TGG 0.615448 2_1:-32079501 Msa0205370:CDS
CAACTACTTCCAATGCAGAA+GGG 0.618123 2_1:-32078826 Msa0205370:CDS
AAGTTGGAAAGACTCCATAA+GGG 0.619230 2_1:-32079304 Msa0205370:CDS
TCTGTTAGCAAACAGAACAA+TGG 0.619369 2_1:-32077110 Msa0205370:CDS
CAAGTTTCAAGCCCTTGCTG+CGG 0.622416 2_1:-32078440 Msa0205370:CDS
AAGTTTAGATTGGTGGTACG+AGG 0.622652 2_1:-32079079 Msa0205370:CDS
TCAAGTTTGGAGAAACGGAT+CGG 0.623514 2_1:-32078730 Msa0205370:CDS
CCCCACCAGGAATGTCGTGA+AGG 0.624016 2_1:+32079499 None:intergenic
CTGTAATCTGATCCATGGCA+AGG 0.624523 2_1:+32078599 None:intergenic
TGGTTTGGTCGGATCAAACG+AGG 0.629492 2_1:-32077354 Msa0205370:CDS
CCTTCACGACATTCCTGGTG+GGG 0.630772 2_1:-32079499 Msa0205370:CDS
GATGCTCTGCAGCACACCAT+AGG 0.631453 2_1:+32079403 None:intergenic
ACCTTACGTCGATTTAAACC+AGG 0.632381 2_1:+32078940 None:intergenic
GCTGATGCATTTCAGCGTCA+GGG 0.638246 2_1:-32081202 Msa0205370:CDS
CGATATAAACCATCATCCAA+AGG 0.642132 2_1:+32078397 None:intergenic
AGAAAGAGTGCTCAAACATG+AGG 0.645720 2_1:-32077250 Msa0205370:CDS
AATGAATGGAATGGAAACGT+AGG 0.645953 2_1:+32081872 None:intergenic
CTAGTATCAGACAATCTCGA+CGG 0.652812 2_1:-32077395 Msa0205370:CDS
TGGCCGGTATTGGAGCGTGG+TGG 0.653763 2_1:-32079171 Msa0205370:CDS
AAGTAGGGATGGATAACATG+AGG 0.657466 2_1:-32077292 Msa0205370:CDS
CTTGAACTATGATTCTAATG+GGG 0.660628 2_1:+32077468 None:intergenic
GAAAGAAAACAGCACATGTG+GGG 0.660761 2_1:+32081741 None:intergenic
ATGACTGAGGAATATGGTGA+AGG 0.661743 2_1:-32079375 Msa0205370:CDS
GCCATGGATCAGATTACAGG+TGG 0.662491 2_1:-32078595 Msa0205370:CDS
TTGGTCGGATCAAACGAGGG+TGG 0.670508 2_1:-32077350 Msa0205370:CDS
TTCGCTGACACCCATCACCA+TGG 0.672093 2_1:-32078524 Msa0205370:CDS
ATGGTGATGGGTGTCAGCGA+AGG 0.673043 2_1:+32078526 None:intergenic
TGGAGATACCAAAGCCGCCG+GGG 0.674941 2_1:+32078891 None:intergenic
GATGTCTTTCCATCTTCACA+AGG 0.675008 2_1:-32080153 Msa0205370:intron
GATTGATGGTTACCTCGCAG+AGG 0.680021 2_1:-32078491 Msa0205370:CDS
TCCACAAAACACTTCCACCA+GGG 0.688214 2_1:+32079136 None:intergenic
ATAGCTGTCATGGAATCTCG+GGG 0.692208 2_1:-32079018 Msa0205370:CDS
AGAGCATCTTGAAATGACTG+AGG 0.696142 2_1:-32079388 Msa0205370:CDS
AAGAAGCATAATGTGCAATG+TGG 0.703382 2_1:+32076816 None:intergenic
GTAGTAGTGCACAAGCACAT+GGG 0.706419 2_1:-32082017 None:intergenic
CAGTACCCGACTTGCCCCGG+CGG 0.708990 2_1:-32078905 Msa0205370:CDS
GGTTTGGTCGGATCAAACGA+GGG 0.709075 2_1:-32077353 Msa0205370:CDS
CATCTGGGGCAACCTCTGCG+AGG 0.712597 2_1:+32078479 None:intergenic
GTGGAATGGAATAAGTACTG+GGG 0.725932 2_1:-32079118 Msa0205370:CDS
GCTGACACCCATCACCATGG+TGG 0.738037 2_1:-32078521 Msa0205370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAATTTATTTTCTTTG+TGG - chr2_1:32078122-32078141 Msa0205370:intron 10.0%
!!! TCTATTTTGTATTTATTAGA+AGG + chr2_1:32076849-32076868 None:intergenic 15.0%
!! AAAAATGTTTATTGGTAAAA+GGG + chr2_1:32077080-32077099 None:intergenic 15.0%
!! TAAAAATGTTTATTGGTAAA+AGG + chr2_1:32077081-32077100 None:intergenic 15.0%
!!! TTTATTTATTTGTTAGTTAG+TGG - chr2_1:32077101-32077120 Msa0205370:CDS 15.0%
!!! TTAATTTTTGCTTATGTTTT+TGG - chr2_1:32077152-32077171 Msa0205370:CDS 15.0%
!!! TAATGAAATTTGTGTTTTTT+AGG - chr2_1:32077263-32077282 Msa0205370:CDS 15.0%
!!! AATGAAATTTGTGTTTTTTA+GGG - chr2_1:32077264-32077283 Msa0205370:CDS 15.0%
!! AAATTAAAAGAGCAAAAAAA+AGG + chr2_1:32077626-32077645 None:intergenic 15.0%
!! TAGATATGTTTATTATATGA+CGG - chr2_1:32078406-32078425 Msa0205370:CDS 15.0%
!! TATTTAACATTACATAAAAG+TGG + chr2_1:32078536-32078555 None:intergenic 15.0%
!! TATGGTATATAGTATTATAA+TGG - chr2_1:32080482-32080501 Msa0205370:intron 15.0%
!! ATGGTATATAGTATTATAAT+GGG - chr2_1:32080483-32080502 Msa0205370:intron 15.0%
!! AAAAAATATGCAACATAATT+AGG - chr2_1:32080783-32080802 Msa0205370:intron 15.0%
!! AAAAATATGCAACATAATTA+GGG - chr2_1:32080784-32080803 Msa0205370:intron 15.0%
!!! GAAAATTTTCTATATATTCA+AGG + chr2_1:32081090-32081109 None:intergenic 15.0%
!!! ATAGAAAATTTTCTTTGTTT+TGG - chr2_1:32081097-32081116 Msa0205370:intron 15.0%
!!! TGTTTTAACAAACAATTGAA+TGG - chr2_1:32077338-32077357 Msa0205370:CDS 20.0%
!! GATTAAACAATATATATGAG+TGG - chr2_1:32078012-32078031 Msa0205370:intron 20.0%
!! AAAATATAGCACTAAGTAAT+AGG + chr2_1:32078321-32078340 None:intergenic 20.0%
!!! TTACTTAGTGCTATATTTTT+TGG - chr2_1:32078322-32078341 Msa0205370:intron 20.0%
!! TTGTTAAGTCTCATTTAAAA+TGG + chr2_1:32078461-32078480 None:intergenic 20.0%
!!! TGATTTGTTAAAATTCACAT+GGG + chr2_1:32078790-32078809 None:intergenic 20.0%
!!! TTGATTTGTTAAAATTCACA+TGG + chr2_1:32078791-32078810 None:intergenic 20.0%
!!! CTTTTTTTTCAAATGATGTT+TGG - chr2_1:32078939-32078958 Msa0205370:CDS 20.0%
!!! AAGTTAGTTTTAATATGCTT+CGG - chr2_1:32080459-32080478 Msa0205370:intron 20.0%
!!! ATTATAATGGGTTTATCTTA+TGG - chr2_1:32080495-32080514 Msa0205370:intron 20.0%
!! AACATATATAATATTCACTC+AGG + chr2_1:32080557-32080576 None:intergenic 20.0%
!! AAAATATGCAACATAATTAG+GGG - chr2_1:32080785-32080804 Msa0205370:intron 20.0%
!!! TTTTCAATCAAATATGCTTT+GGG + chr2_1:32080962-32080981 None:intergenic 20.0%
!!! ATTTTCAATCAAATATGCTT+TGG + chr2_1:32080963-32080982 None:intergenic 20.0%
!!! TTTTCTATATATTCAAGGAT+TGG + chr2_1:32081085-32081104 None:intergenic 20.0%
!!! ATTTCTTTGAATTTTGAAAG+AGG - chr2_1:32081999-32082018 Msa0205370:five_prime_UTR 20.0%
! GGATTTCATTTGTTTAATGT+TGG + chr2_1:32076828-32076847 None:intergenic 25.0%
!! TTTATTTGTTAGTTAGTGGA+AGG - chr2_1:32077105-32077124 Msa0205370:CDS 25.0%
!!! TTGTCAATTGTTTTGGTTTT+TGG - chr2_1:32077188-32077207 Msa0205370:CDS 25.0%
!!! AGGGTTTTATTTTGATTTTG+AGG - chr2_1:32077283-32077302 Msa0205370:CDS 25.0%
! AATTGAATTGAATCTGATTG+TGG - chr2_1:32077394-32077413 Msa0205370:CDS 25.0%
! AAGAGCAAAAAAAAGGATAA+GGG + chr2_1:32077619-32077638 None:intergenic 25.0%
! AAAGAGCAAAAAAAAGGATA+AGG + chr2_1:32077620-32077639 None:intergenic 25.0%
!!! CTACTTTTATCTAAGTTTGT+TGG - chr2_1:32077721-32077740 Msa0205370:intron 25.0%
! GATAAACACTAAAAGAAACA+TGG + chr2_1:32077766-32077785 None:intergenic 25.0%
!! TTTCTTTTAGTGTTTATCAG+TGG - chr2_1:32077768-32077787 Msa0205370:intron 25.0%
!! TTATTTTCTTTGTGGTCTTT+AGG - chr2_1:32078130-32078149 Msa0205370:intron 25.0%
!! TCTCATTTAAAATGGCTTAA+AGG + chr2_1:32078453-32078472 None:intergenic 25.0%
!! AATATTTTCATTGCTCTCAT+AGG - chr2_1:32078552-32078571 Msa0205370:CDS 25.0%
! CAATCTAAACTTGTATTCTT+TGG + chr2_1:32079688-32079707 None:intergenic 25.0%
! CAAAGAATACAAGTTTAGAT+TGG - chr2_1:32079686-32079705 Msa0205370:intron 25.0%
!!! ATTTTTTGATCTTCTTCAGA+TGG + chr2_1:32079910-32079929 None:intergenic 25.0%
! AGAAGATCAAAAAATTCTTC+TGG - chr2_1:32079915-32079934 Msa0205370:intron 25.0%
!!! AAGTTTTAAGTTAACATCTG+GGG + chr2_1:32080313-32080332 None:intergenic 25.0%
!!! GAAGTTTTAAGTTAACATCT+GGG + chr2_1:32080314-32080333 None:intergenic 25.0%
! TACCTTCAAGTAAATATCTA+TGG + chr2_1:32080406-32080425 None:intergenic 25.0%
!! GTTTTACAAGTTTACTCTTT+AGG - chr2_1:32080711-32080730 Msa0205370:intron 25.0%
! AACGCAGTTGAAAATTTAAT+AGG - chr2_1:32080829-32080848 Msa0205370:intron 25.0%
! ACGCAGTTGAAAATTTAATA+GGG - chr2_1:32080830-32080849 Msa0205370:intron 25.0%
! GAAAATATAGATAGGGTTTA+GGG - chr2_1:32080874-32080893 Msa0205370:intron 25.0%
!! AGTTTGAAAACGTTTTACAA+AGG + chr2_1:32081001-32081020 None:intergenic 25.0%
!! ACGTTTTCAAACTATATTGT+TGG - chr2_1:32081008-32081027 Msa0205370:intron 25.0%
!! TTGGTAATAAAAGCATAAAC+TGG + chr2_1:32081066-32081085 None:intergenic 25.0%
! ACTTGAACTATGATTCTAAT+GGG + chr2_1:32081311-32081330 None:intergenic 25.0%
! AACTTGAACTATGATTCTAA+TGG + chr2_1:32081312-32081331 None:intergenic 25.0%
! AAGAAATTTAAGAAGTGGTT+TGG - chr2_1:32081406-32081425 Msa0205370:five_prime_UTR 25.0%
! TAATAATGTTGAGAAGTTGA+AGG - chr2_1:32081691-32081710 Msa0205370:five_prime_UTR 25.0%
!!! AGAAATGAACATTTTAGAGT+AGG + chr2_1:32081985-32082004 None:intergenic 25.0%
! CTATGAGTTGTCAATTGTTT+TGG - chr2_1:32077181-32077200 Msa0205370:CDS 30.0%
TATCTAATCAACCCTAGTTT+AGG + chr2_1:32077237-32077256 None:intergenic 30.0%
TAACAAACAATTGAATGGAG+TGG - chr2_1:32077343-32077362 Msa0205370:CDS 30.0%
ATTGAATCTGATTGTGGATT+TGG - chr2_1:32077400-32077419 Msa0205370:CDS 30.0%
TTGAATCTGATTGTGGATTT+GGG - chr2_1:32077401-32077420 Msa0205370:CDS 30.0%
!!! TTTGGGTCTTTTTTTTGTTG+TGG - chr2_1:32077418-32077437 Msa0205370:CDS 30.0%
!!! TTGGGTCTTTTTTTTGTTGT+GGG - chr2_1:32077419-32077438 Msa0205370:CDS 30.0%
!!! TTTTTTTTGTTGTGGGTTTC+TGG - chr2_1:32077426-32077445 Msa0205370:CDS 30.0%
!!! TTTTTTTGTTGTGGGTTTCT+GGG - chr2_1:32077427-32077446 Msa0205370:CDS 30.0%
!! GTTTCTGGGAATTTTTCTAA+AGG - chr2_1:32077441-32077460 Msa0205370:CDS 30.0%
!! TTTCTAAAGGTTGAGTCTTT+TGG - chr2_1:32077454-32077473 Msa0205370:CDS 30.0%
!! TTCTAAAGGTTGAGTCTTTT+GGG - chr2_1:32077455-32077474 Msa0205370:CDS 30.0%
! ATTGAAAGAAGGTACATTGT+TGG - chr2_1:32077486-32077505 Msa0205370:CDS 30.0%
!!! AGTTCAAGTTTTTTCCTCAA+TGG - chr2_1:32077527-32077546 Msa0205370:CDS 30.0%
!! AAGTTTGTTGGTTTACTGAT+AGG - chr2_1:32077733-32077752 Msa0205370:intron 30.0%
TTGAAGAAATGATTCTGTCA+AGG - chr2_1:32077837-32077856 Msa0205370:intron 30.0%
GATCTATCTAGTATCTATCA+AGG + chr2_1:32077882-32077901 None:intergenic 30.0%
AATCCCAAATTCTACATAGA+GGG + chr2_1:32077904-32077923 None:intergenic 30.0%
AAATCTGTAATCTGTGCATT+TGG - chr2_1:32078038-32078057 Msa0205370:intron 30.0%
GTAGGAATGAAATAAACGTA+TGG + chr2_1:32078353-32078372 None:intergenic 30.0%
! TGTGAGTTTGAAGTATCATA+GGG + chr2_1:32078379-32078398 None:intergenic 30.0%
! ATGTGAGTTTGAAGTATCAT+AGG + chr2_1:32078380-32078399 None:intergenic 30.0%
TGTTTATTATATGACGGTGA+AGG - chr2_1:32078412-32078431 Msa0205370:CDS 30.0%
GCTTAAAGGAAATAACAACA+GGG + chr2_1:32078439-32078458 None:intergenic 30.0%
TAACATATACCTTGTGAAGA+TGG + chr2_1:32078634-32078653 None:intergenic 30.0%
! TTTTTAACGCACTCTTTGAT+TGG - chr2_1:32078711-32078730 Msa0205370:CDS 30.0%
ATCTGTTCAATCAAATCATG+TGG - chr2_1:32078743-32078762 Msa0205370:CDS 30.0%
TCTGTTCAATCAAATCATGT+GGG - chr2_1:32078744-32078763 Msa0205370:CDS 30.0%
TAGCTGATGCACTATTTATA+CGG - chr2_1:32078890-32078909 Msa0205370:CDS 30.0%
AGCATATATACAAATACCGA+GGG + chr2_1:32079130-32079149 None:intergenic 30.0%
AAGCATATATACAAATACCG+AGG + chr2_1:32079131-32079150 None:intergenic 30.0%
CACTTGATTGAAAAAGGTTT+CGG + chr2_1:32079443-32079462 None:intergenic 30.0%
AGAATACAAGTTTAGATTGG+TGG - chr2_1:32079689-32079708 Msa0205370:intron 30.0%
!! TGAGTTTACCGATTTATAAG+AGG - chr2_1:32079731-32079750 Msa0205370:intron 30.0%
GCTATCAACCTCTTATAAAT+CGG + chr2_1:32079742-32079761 None:intergenic 30.0%
TCCATTGAATACGAGAAATT+TGG + chr2_1:32080111-32080130 None:intergenic 30.0%
!!! GGAAGTTTTAAGTTAACATC+TGG + chr2_1:32080315-32080334 None:intergenic 30.0%
TGCCATAGATATTTACTTGA+AGG - chr2_1:32080401-32080420 Msa0205370:intron 30.0%
!! AGTTTTAATATGCTTCGGTA+TGG - chr2_1:32080464-32080483 Msa0205370:intron 30.0%
! AGCTTTTGTGATTTAGTCAA+CGG + chr2_1:32080674-32080693 None:intergenic 30.0%
!! CACAAAAGCTTTAAGAATGT+TGG - chr2_1:32080684-32080703 Msa0205370:intron 30.0%
!! TACTCTTTAGGATAGAGAAT+TGG - chr2_1:32080723-32080742 Msa0205370:intron 30.0%
CGCAGTTGAAAATTTAATAG+GGG - chr2_1:32080831-32080850 Msa0205370:intron 30.0%
TAATAGGGGTCTAATAAGAA+TGG - chr2_1:32080845-32080864 Msa0205370:intron 30.0%
GACAAGGGAAAATATAGATA+GGG - chr2_1:32080867-32080886 Msa0205370:intron 30.0%
GGAAAATATAGATAGGGTTT+AGG - chr2_1:32080873-32080892 Msa0205370:intron 30.0%
CACGGATGAAAATTAAACAT+GGG + chr2_1:32080919-32080938 None:intergenic 30.0%
TCACGGATGAAAATTAAACA+TGG + chr2_1:32080920-32080939 None:intergenic 30.0%
GATTGAAAATCACATATCCT+TGG - chr2_1:32080973-32080992 Msa0205370:intron 30.0%
CTTGAACTATGATTCTAATG+GGG + chr2_1:32081310-32081329 None:intergenic 30.0%
GGATCAAGAAATTTAAGAAG+TGG - chr2_1:32081401-32081420 Msa0205370:five_prime_UTR 30.0%
!! AATTTAAGAAGTGGTTTGGT+CGG - chr2_1:32081410-32081429 Msa0205370:five_prime_UTR 30.0%
!! AAAACCAGGTATTGAAAGTA+GGG - chr2_1:32081468-32081487 Msa0205370:five_prime_UTR 30.0%
! GAACATTTTAGACACTAAGA+AGG + chr2_1:32081782-32081801 None:intergenic 30.0%
ATGTATTGAGATGGAAATGA+AGG - chr2_1:32081868-32081887 Msa0205370:five_prime_UTR 30.0%
TGTTTAATGTTGGTGTGTGT+CGG + chr2_1:32076818-32076837 None:intergenic 35.0%
AATGAATGGAATGGAAACGT+AGG + chr2_1:32076906-32076925 None:intergenic 35.0%
AGAGAGAACAATGAATGGAA+TGG + chr2_1:32076915-32076934 None:intergenic 35.0%
AAGAGAGAGAGAACAATGAA+TGG + chr2_1:32076920-32076939 None:intergenic 35.0%
TCATCAAGCACTAACTTAAC+TGG + chr2_1:32076956-32076975 None:intergenic 35.0%
TGAAAGAAAACAGCACATGT+GGG + chr2_1:32077038-32077057 None:intergenic 35.0%
ATGAAAGAAAACAGCACATG+TGG + chr2_1:32077039-32077058 None:intergenic 35.0%
!! TTTTTGGTAGAGAACTCACT+TGG - chr2_1:32077204-32077223 Msa0205370:CDS 35.0%
TTGGTTGTTGACCTAAACTA+GGG - chr2_1:32077223-32077242 Msa0205370:CDS 35.0%
! AATTGAATGGAGTGGTTCTA+GGG - chr2_1:32077351-32077370 Msa0205370:CDS 35.0%
! TCTAAAGGTTGAGTCTTTTG+GGG - chr2_1:32077456-32077475 Msa0205370:CDS 35.0%
! TCAATGGCTTGTGTGAAATT+GGG - chr2_1:32077543-32077562 Msa0205370:CDS 35.0%
GATAAGGGTAGAAAAATACC+AGG + chr2_1:32077604-32077623 None:intergenic 35.0%
AGATCCCTCTATGTAGAATT+TGG - chr2_1:32077897-32077916 Msa0205370:intron 35.0%
GATCCCTCTATGTAGAATTT+GGG - chr2_1:32077898-32077917 Msa0205370:intron 35.0%
CAATCCCAAATTCTACATAG+AGG + chr2_1:32077905-32077924 None:intergenic 35.0%
! CTCTATGTAGAATTTGGGAT+TGG - chr2_1:32077903-32077922 Msa0205370:intron 35.0%
! ATGTAGAATTTGGGATTGGT+TGG - chr2_1:32077907-32077926 Msa0205370:intron 35.0%
GATGGCAATTTGCATGTATA+AGG - chr2_1:32078203-32078222 Msa0205370:intron 35.0%
! AAGGGAACCTTTTGTATGAT+AGG - chr2_1:32078262-32078281 Msa0205370:intron 35.0%
ACTTTGGCCTATCATACAAA+AGG + chr2_1:32078272-32078291 None:intergenic 35.0%
! GTGAGTTTGAAGTATCATAG+GGG + chr2_1:32078378-32078397 None:intergenic 35.0%
GGCTTAAAGGAAATAACAAC+AGG + chr2_1:32078440-32078459 None:intergenic 35.0%
ACTTCAACAACTATATCGCT+GGG + chr2_1:32078596-32078615 None:intergenic 35.0%
AACTTCAACAACTATATCGC+TGG + chr2_1:32078597-32078616 None:intergenic 35.0%
AGCGATATAGTTGTTGAAGT+TGG - chr2_1:32078596-32078615 Msa0205370:CDS 35.0%
! GCGTTAAAAAGTGTGTGTTA+GGG + chr2_1:32078701-32078720 None:intergenic 35.0%
! TGCGTTAAAAAGTGTGTGTT+AGG + chr2_1:32078702-32078721 None:intergenic 35.0%
ATGTGGGTCCCATATAAATT+TGG - chr2_1:32078760-32078779 Msa0205370:CDS 35.0%
TGTGGGTCCCATATAAATTT+GGG - chr2_1:32078761-32078780 Msa0205370:CDS 35.0%
TGCTAGCATTGTTCATTTAG+AGG - chr2_1:32078836-32078855 Msa0205370:CDS 35.0%
TTGTTCATTTAGAGGACTGT+TGG - chr2_1:32078844-32078863 Msa0205370:CDS 35.0%
AATAATTCCAAACTCACCCT+CGG - chr2_1:32079111-32079130 Msa0205370:CDS 35.0%
CTTGAAATGACTGAGGAATA+TGG - chr2_1:32079394-32079413 Msa0205370:CDS 35.0%
ATTGAAAAAGGTTTCGGCTT+GGG + chr2_1:32079437-32079456 None:intergenic 35.0%
!!! CGAAACCTTTTTCAATCAAG+TGG - chr2_1:32079441-32079460 Msa0205370:CDS 35.0%
TTATGGAGTCTTTCCAACTT+CGG + chr2_1:32079471-32079490 None:intergenic 35.0%
AAGTTGGAAAGACTCCATAA+GGG - chr2_1:32079471-32079490 Msa0205370:CDS 35.0%
TCCACTGACCCAAATTTATT+TGG - chr2_1:32079580-32079599 Msa0205370:CDS 35.0%
CCACTGACCCAAATTTATTT+GGG - chr2_1:32079581-32079600 Msa0205370:CDS 35.0%
TTGTGGAATGGAATAAGTAC+TGG - chr2_1:32079655-32079674 Msa0205370:intron 35.0%
TGTGGAATGGAATAAGTACT+GGG - chr2_1:32079656-32079675 Msa0205370:intron 35.0%
TATGCTAAAACGTATTTGCC+TGG - chr2_1:32079817-32079836 Msa0205370:intron 35.0%
TTAAATCGACGTAAGGTTTC+CGG - chr2_1:32079841-32079860 Msa0205370:intron 35.0%
! TTTTGATCTTCTTCAGATGG+TGG + chr2_1:32079907-32079926 None:intergenic 35.0%
TTTCTCCAAACTTGATATGC+AGG + chr2_1:32080040-32080059 None:intergenic 35.0%
GCATATCAAGTTTGGAGAAA+CGG - chr2_1:32080040-32080059 Msa0205370:intron 35.0%
GCCAAATTTCTCGTATTCAA+TGG - chr2_1:32080107-32080126 Msa0205370:intron 35.0%
CGATATAAACCATCATCCAA+AGG + chr2_1:32080381-32080400 None:intergenic 35.0%
! GCTTTTGTGATTTAGTCAAC+GGG + chr2_1:32080673-32080692 None:intergenic 35.0%
GGTCTAATAAGAATGGACAA+GGG - chr2_1:32080852-32080871 Msa0205370:intron 35.0%
GGACAAGGGAAAATATAGAT+AGG - chr2_1:32080866-32080885 Msa0205370:intron 35.0%
ATATAGATAGGGTTTAGGGA+TGG - chr2_1:32080878-32080897 Msa0205370:intron 35.0%
AAGTAACGTCACTCAAATCA+CGG + chr2_1:32080937-32080956 None:intergenic 35.0%
TAAAAATGTAGTCTCACCCA+TGG - chr2_1:32081189-32081208 Msa0205370:intron 35.0%
!! GAAAACCAGGTATTGAAAGT+AGG - chr2_1:32081467-32081486 Msa0205370:five_prime_UTR 35.0%
TCTGTTAGCAAACAGAACAA+TGG - chr2_1:32081665-32081684 Msa0205370:five_prime_UTR 35.0%
CTGTTAGCAAACAGAACAAT+GGG - chr2_1:32081666-32081685 Msa0205370:five_prime_UTR 35.0%
AGTTCTTCTATCAGTGACAA+AGG - chr2_1:32081737-32081756 Msa0205370:five_prime_UTR 35.0%
! AAGAAGCATAATGTGCAATG+TGG + chr2_1:32081962-32081981 None:intergenic 35.0%
GAAAGAAAACAGCACATGTG+GGG + chr2_1:32077037-32077056 None:intergenic 40.0%
CTTGGTTGTTGACCTAAACT+AGG - chr2_1:32077222-32077241 Msa0205370:CDS 40.0%
!!! TTTGAGGTTGTTTTTGCACG+TGG - chr2_1:32077299-32077318 Msa0205370:CDS 40.0%
!!! TTGAGGTTGTTTTTGCACGT+GGG - chr2_1:32077300-32077319 Msa0205370:CDS 40.0%
CAATTGAATGGAGTGGTTCT+AGG - chr2_1:32077350-32077369 Msa0205370:CDS 40.0%
!!! TGGTTCTAGGGTTTTGAAAG+TGG - chr2_1:32077363-32077382 Msa0205370:CDS 40.0%
GGGGAATTGGAATTGAAAGA+AGG - chr2_1:32077475-32077494 Msa0205370:CDS 40.0%
CAATTTCACACAAGCCATTG+AGG + chr2_1:32077544-32077563 None:intergenic 40.0%
! CTCAATGGCTTGTGTGAAAT+TGG - chr2_1:32077542-32077561 Msa0205370:CDS 40.0%
CAGTCTCAATCTTCATTGAC+AGG + chr2_1:32078074-32078093 None:intergenic 40.0%
TTGTATGATAGGCCAAAGTC+CGG - chr2_1:32078273-32078292 Msa0205370:intron 40.0%
AAGTTCATGTAACCGGACTT+TGG + chr2_1:32078288-32078307 None:intergenic 40.0%
GCAAAGCAAGTTCATGTAAC+CGG + chr2_1:32078295-32078314 None:intergenic 40.0%
! TGAAGTATCATAGGGGTAGT+AGG + chr2_1:32078371-32078390 None:intergenic 40.0%
GATGTCTTTCCATCTTCACA+AGG - chr2_1:32078622-32078641 Msa0205370:CDS 40.0%
GTGGGTCCCATATAAATTTG+GGG - chr2_1:32078762-32078781 Msa0205370:CDS 40.0%
TGGGTCCCATATAAATTTGG+GGG - chr2_1:32078763-32078782 Msa0205370:CDS 40.0%
TGGGTCCCCCAAATTTATAT+GGG + chr2_1:32078771-32078790 None:intergenic 40.0%
ATGGGTCCCCCAAATTTATA+TGG + chr2_1:32078772-32078791 None:intergenic 40.0%
TTCCTCTGATTCAGAAGCTT+TGG + chr2_1:32079242-32079261 None:intergenic 40.0%
CATCAAATGTTGTGTGCCTA+TGG - chr2_1:32079356-32079375 Msa0205370:CDS 40.0%
! AGAGCATCTTGAAATGACTG+AGG - chr2_1:32079387-32079406 Msa0205370:CDS 40.0%
ATGACTGAGGAATATGGTGA+AGG - chr2_1:32079400-32079419 Msa0205370:CDS 40.0%
GATTGAAAAAGGTTTCGGCT+TGG + chr2_1:32079438-32079457 None:intergenic 40.0%
GAGGACCACTTGATTGAAAA+AGG + chr2_1:32079449-32079468 None:intergenic 40.0%
GAAGTTGGAAAGACTCCATA+AGG - chr2_1:32079470-32079489 Msa0205370:CDS 40.0%
! ACAAGTTTGAAGTGCCCTTA+TGG + chr2_1:32079488-32079507 None:intergenic 40.0%
TCAAACTTGTGACGATGTTC+TGG - chr2_1:32079498-32079517 Msa0205370:CDS 40.0%
AAGAGCTTCACATTGTGAAG+AGG - chr2_1:32079530-32079549 Msa0205370:CDS 40.0%
CCCAAATAAATTTGGGTCAG+TGG + chr2_1:32079584-32079603 None:intergenic 40.0%
CTGACCCAAATTTATTTGGG+TGG - chr2_1:32079584-32079603 Msa0205370:intron 40.0%
! GTGGAATGGAATAAGTACTG+GGG - chr2_1:32079657-32079676 Msa0205370:intron 40.0%
! AAGTTTAGATTGGTGGTACG+AGG - chr2_1:32079696-32079715 Msa0205370:intron 40.0%
!! TAAGAGGTTGATAGCTGTCA+TGG - chr2_1:32079747-32079766 Msa0205370:intron 40.0%
TGATAGCTGTCATGGAATCT+CGG - chr2_1:32079755-32079774 Msa0205370:intron 40.0%
ATTAGGCAGGAAATCATTGC+CGG - chr2_1:32079781-32079800 Msa0205370:intron 40.0%
AGCATAGAAAGCAAGAGAAC+CGG + chr2_1:32079803-32079822 None:intergenic 40.0%
!! ACCTTACGTCGATTTAAACC+AGG + chr2_1:32079838-32079857 None:intergenic 40.0%
TCAACTACTTCCAATGCAGA+AGG - chr2_1:32079948-32079967 Msa0205370:intron 40.0%
CAACTACTTCCAATGCAGAA+GGG - chr2_1:32079949-32079968 Msa0205370:intron 40.0%
TCCAAACTTGATATGCAGGA+GGG + chr2_1:32080036-32080055 None:intergenic 40.0%
TCAAGTTTGGAGAAACGGAT+CGG - chr2_1:32080045-32080064 Msa0205370:intron 40.0%
TCTTGATCATTTCCTTGCCA+TGG - chr2_1:32080164-32080183 Msa0205370:CDS 40.0%
! ATCAATCAGTTTTGCCACCA+TGG + chr2_1:32080271-32080290 None:intergenic 40.0%
ATGGTGGCAAAACTGATTGA+TGG - chr2_1:32080270-32080289 Msa0205370:intron 40.0%
TATTCACTCAGGCCAACAAA+TGG + chr2_1:32080546-32080565 None:intergenic 40.0%
TTCGATACTGCAATGCTTCT+AGG - chr2_1:32080591-32080610 Msa0205370:intron 40.0%
GGGTCTAATAAGAATGGACA+AGG - chr2_1:32080851-32080870 Msa0205370:intron 40.0%
!!! AACGTTTTACAAAGGTGCCA+AGG + chr2_1:32080993-32081012 None:intergenic 40.0%
ACTGTAATGCGTGTTCATGT+TGG - chr2_1:32081128-32081147 Msa0205370:intron 40.0%
ATGCTTCTAATGAGAGCTTC+TGG + chr2_1:32081259-32081278 None:intergenic 40.0%
CTAGTATCAGACAATCTCGA+CGG - chr2_1:32081380-32081399 Msa0205370:intron 40.0%
AAGTAGGGATGGATAACATG+AGG - chr2_1:32081483-32081502 Msa0205370:five_prime_UTR 40.0%
GATGGATAACATGAGGATGA+GGG - chr2_1:32081490-32081509 Msa0205370:five_prime_UTR 40.0%
!! AGAAAGAGTGCTCAAACATG+AGG - chr2_1:32081525-32081544 Msa0205370:five_prime_UTR 40.0%
AGGCAAGAGATTGAGAAACT+TGG - chr2_1:32081545-32081564 Msa0205370:five_prime_UTR 40.0%
CAAGAGATTGAGAAACTTGG+TGG - chr2_1:32081548-32081567 Msa0205370:five_prime_UTR 40.0%
! GATTGAGAAACTTGGTGGTA+AGG - chr2_1:32081553-32081572 Msa0205370:five_prime_UTR 40.0%
! AAACTTGGTGGTAAGGCAAA+AGG - chr2_1:32081560-32081579 Msa0205370:five_prime_UTR 40.0%
!! CTACTTTGCTTTTCCATCTC+AGG - chr2_1:32081842-32081861 Msa0205370:five_prime_UTR 40.0%
CTCAATACATTCACCTGAGA+TGG + chr2_1:32081858-32081877 None:intergenic 40.0%
CTCAGGTGAATGTATTGAGA+TGG - chr2_1:32081859-32081878 Msa0205370:five_prime_UTR 40.0%
!! GGTTGAGTCTTTTGGGGAAT+TGG - chr2_1:32077462-32077481 Msa0205370:CDS 45.0%
GGGTAGAAAAATACCAGGCT+TGG + chr2_1:32077599-32077618 None:intergenic 45.0%
!! GGGATTGGTTGGTGTTCTTA+TGG - chr2_1:32077918-32077937 Msa0205370:intron 45.0%
ACATGCAAATTGCCATCGCT+GGG + chr2_1:32078200-32078219 None:intergenic 45.0%
TACATGCAAATTGCCATCGC+TGG + chr2_1:32078201-32078220 None:intergenic 45.0%
TGTGTATACCACCTCTGACT+AGG - chr2_1:32078235-32078254 Msa0205370:intron 45.0%
CACCTCTGACTAGGAGTTAA+GGG - chr2_1:32078244-32078263 Msa0205370:intron 45.0%
TTCCCTTAACTCCTAGTCAG+AGG + chr2_1:32078249-32078268 None:intergenic 45.0%
TCTCATAGGTTCTGTACGAC+CGG - chr2_1:32078566-32078585 Msa0205370:CDS 45.0%
ACAAATACCGAGGGTGAGTT+TGG + chr2_1:32079121-32079140 None:intergenic 45.0%
! TTCCCTTTGCTCTCTAGAAG+CGG - chr2_1:32079196-32079215 Msa0205370:CDS 45.0%
TGCCAAAGCTTCTGAATCAG+AGG - chr2_1:32079237-32079256 Msa0205370:CDS 45.0%
ATACACCTTCACGACATTCC+TGG - chr2_1:32079271-32079290 Msa0205370:CDS 45.0%
! CGCAACGAGTTCGAATGTTT+TGG + chr2_1:32079302-32079321 None:intergenic 45.0%
CTCGTTGCGAAATTCTGCTA+CGG - chr2_1:32079313-32079332 Msa0205370:CDS 45.0%
CGGTGTGAAACTCGAACTTA+CGG - chr2_1:32079333-32079352 Msa0205370:CDS 45.0%
CAATGTGAAGCTCTTCAGCT+TGG + chr2_1:32079525-32079544 None:intergenic 45.0%
CATTGAATCGCTTGCAGCAA+AGG - chr2_1:32079555-32079574 Msa0205370:CDS 45.0%
CCGGCCACCCAAATAAATTT+GGG + chr2_1:32079591-32079610 None:intergenic 45.0%
CCCAAATTTATTTGGGTGGC+CGG - chr2_1:32079588-32079607 Msa0205370:intron 45.0%
ACCGGCCACCCAAATAAATT+TGG + chr2_1:32079592-32079611 None:intergenic 45.0%
TTTATTTGGGTGGCCGGTAT+TGG - chr2_1:32079594-32079613 Msa0205370:intron 45.0%
TCCACAAAACACTTCCACCA+GGG + chr2_1:32079642-32079661 None:intergenic 45.0%
TTCCACAAAACACTTCCACC+AGG + chr2_1:32079643-32079662 None:intergenic 45.0%
!!! GGTGGAAGTGTTTTGTGGAA+TGG - chr2_1:32079643-32079662 Msa0205370:intron 45.0%
GATAGCTGTCATGGAATCTC+GGG - chr2_1:32079756-32079775 Msa0205370:intron 45.0%
ATAGCTGTCATGGAATCTCG+GGG - chr2_1:32079757-32079776 Msa0205370:intron 45.0%
GCCTGGTTTAAATCGACGTA+AGG - chr2_1:32079834-32079853 Msa0205370:intron 45.0%
GTCCAAACGAAGTTCCTGTT+TGG - chr2_1:32079976-32079995 Msa0205370:intron 45.0%
GACCAAACAGGAACTTCGTT+TGG + chr2_1:32079981-32080000 None:intergenic 45.0%
CCTGTTTGGTCTACTTCGAA+CGG - chr2_1:32079990-32080009 Msa0205370:intron 45.0%
GGGGTTCACTCGTAAAATCA+TGG + chr2_1:32080016-32080035 None:intergenic 45.0%
CCAAACTTGATATGCAGGAG+GGG + chr2_1:32080035-32080054 None:intergenic 45.0%
CTCCAAACTTGATATGCAGG+AGG + chr2_1:32080037-32080056 None:intergenic 45.0%
CTGTAATCTGATCCATGGCA+AGG + chr2_1:32080179-32080198 None:intergenic 45.0%
CTTGCCATGGATCAGATTAC+AGG - chr2_1:32080177-32080196 Msa0205370:CDS 45.0%
ACCACCTGTAATCTGATCCA+TGG + chr2_1:32080184-32080203 None:intergenic 45.0%
CCATCTTCATCAATCGAGCA+TGG + chr2_1:32080213-32080232 None:intergenic 45.0%
CCATGCTCGATTGATGAAGA+TGG - chr2_1:32080210-32080229 Msa0205370:intron 45.0%
GATGAAGATGGCCAGTTGAT+CGG - chr2_1:32080222-32080241 Msa0205370:intron 45.0%
! AGTTTTGCCACCATGGTGAT+GGG + chr2_1:32080264-32080283 None:intergenic 45.0%
TAAACCATCATCCAAAGGCC+TGG + chr2_1:32080376-32080395 None:intergenic 45.0%
TCAACGGGATCCTATGTTCA+GGG + chr2_1:32080658-32080677 None:intergenic 45.0%
AATGTAGTCTCACCCATGGT+TGG - chr2_1:32081193-32081212 Msa0205370:CDS 45.0%
TTTCTGACTCCACCAACCAT+GGG + chr2_1:32081208-32081227 None:intergenic 45.0%
CAGAAAGAGAGCAACTATGC+AGG - chr2_1:32081222-32081241 Msa0205370:CDS 45.0%
AGAGCAACTATGCAGGCTAA+TGG - chr2_1:32081229-32081248 Msa0205370:CDS 45.0%
CCATCCCTACTTTCAATACC+TGG + chr2_1:32081475-32081494 None:intergenic 45.0%
!! CCAGGTATTGAAAGTAGGGA+TGG - chr2_1:32081472-32081491 Msa0205370:five_prime_UTR 45.0%
GGATGGATAACATGAGGATG+AGG - chr2_1:32081489-32081508 Msa0205370:five_prime_UTR 45.0%
AAGGATCATCAACAAGCGCT+TGG - chr2_1:32081579-32081598 Msa0205370:five_prime_UTR 45.0%
AGGATCATCAACAAGCGCTT+GGG - chr2_1:32081580-32081599 Msa0205370:five_prime_UTR 45.0%
GGAGTTGTGTCGAAGAAACT+CGG - chr2_1:32081602-32081621 Msa0205370:five_prime_UTR 45.0%
GAGTTGTGTCGAAGAAACTC+GGG - chr2_1:32081603-32081622 Msa0205370:five_prime_UTR 45.0%
CAGATGTGTAGTGCTCAAGA+AGG - chr2_1:32081641-32081660 Msa0205370:five_prime_UTR 45.0%
!! AAATAAATAAAAATGTTTAT+TGG + chr2_1:32077088-32077107 None:intergenic 5.0%
AGCACATGGGCAAGCATTCT+AGG - chr2_1:32076771-32076790 Msa0205370:three_prime_UTR 50.0%
AGCTGATGCATTTCAGCGTC+AGG - chr2_1:32077572-32077591 Msa0205370:CDS 50.0%
GCTGATGCATTTCAGCGTCA+GGG - chr2_1:32077573-32077592 Msa0205370:CDS 50.0%
GCTTCTTATTGTCCCAGCGA+TGG - chr2_1:32078185-32078204 Msa0205370:intron 50.0%
CCTTAACTCCTAGTCAGAGG+TGG + chr2_1:32078246-32078265 None:intergenic 50.0%
CCACCTCTGACTAGGAGTTA+AGG - chr2_1:32078243-32078262 Msa0205370:intron 50.0%
CTCATAGGTTCTGTACGACC+GGG - chr2_1:32078567-32078586 Msa0205370:CDS 50.0%
AACTATATCGCTGGGAAGCC+CGG + chr2_1:32078588-32078607 None:intergenic 50.0%
! CTCCGCTTCTAGAGAGCAAA+GGG + chr2_1:32079201-32079220 None:intergenic 50.0%
! ACTCCGCTTCTAGAGAGCAA+AGG + chr2_1:32079202-32079221 None:intergenic 50.0%
!! GCTCTCTAGAAGCGGAGTTT+TGG - chr2_1:32079204-32079223 Msa0205370:CDS 50.0%
ACCTTCACGACATTCCTGGT+GGG - chr2_1:32079275-32079294 Msa0205370:CDS 50.0%
ATCAAGTGGTCCTCCGAAGT+TGG - chr2_1:32079455-32079474 Msa0205370:CDS 50.0%
TGGAGTCTTTCCAACTTCGG+AGG + chr2_1:32079468-32079487 None:intergenic 50.0%
! TCATGGAATCTCGGGGCATT+AGG - chr2_1:32079764-32079783 Msa0205370:intron 50.0%
ACAGGAACTTCGTTTGGACC+AGG + chr2_1:32079975-32079994 None:intergenic 50.0%
CCGTTCGAAGTAGACCAAAC+AGG + chr2_1:32079993-32080012 None:intergenic 50.0%
CCCCTCCTGCATATCAAGTT+TGG - chr2_1:32080032-32080051 Msa0205370:intron 50.0%
GCAGCTTGATCAAGCTGCTT+TGG - chr2_1:32080071-32080090 Msa0205370:intron 50.0%
GCCATGGATCAGATTACAGG+TGG - chr2_1:32080180-32080199 Msa0205370:CDS 50.0%
! CAGTTTTGCCACCATGGTGA+TGG + chr2_1:32080265-32080284 None:intergenic 50.0%
! GATTGATGGTTACCTCGCAG+AGG - chr2_1:32080284-32080303 Msa0205370:intron 50.0%
GCAGCAAGGGCTTGAAACTT+GGG + chr2_1:32080336-32080355 None:intergenic 50.0%
CAAGTTTCAAGCCCTTGCTG+CGG - chr2_1:32080335-32080354 Msa0205370:intron 50.0%
TATGCCAGGCCTTTGGATGA+TGG - chr2_1:32080369-32080388 Msa0205370:intron 50.0%
GCCACAGTTGAGCCATTTGT+TGG - chr2_1:32080531-32080550 Msa0205370:intron 50.0%
GCCAACAAATGGCTCAACTG+TGG + chr2_1:32080535-32080554 None:intergenic 50.0%
CTACCTCTGTCCCTGAACAT+AGG - chr2_1:32080645-32080664 Msa0205370:intron 50.0%
GATCCTATGTTCAGGGACAG+AGG + chr2_1:32080651-32080670 None:intergenic 50.0%
GTCAACGGGATCCTATGTTC+AGG + chr2_1:32080659-32080678 None:intergenic 50.0%
CTTTCTGACTCCACCAACCA+TGG + chr2_1:32081209-32081228 None:intergenic 50.0%
CAGCGATTGAAGTACGAAGC+TGG + chr2_1:32081352-32081371 None:intergenic 50.0%
CAGCTTCGTACTTCAATCGC+TGG - chr2_1:32081350-32081369 Msa0205370:intron 50.0%
!! TGGTTTGGTCGGATCAAACG+AGG - chr2_1:32081421-32081440 Msa0205370:five_prime_UTR 50.0%
! GGTTTGGTCGGATCAAACGA+GGG - chr2_1:32081422-32081441 Msa0205370:five_prime_UTR 50.0%
ATCGGCAGTCAAGGAAAACC+AGG - chr2_1:32081454-32081473 Msa0205370:five_prime_UTR 50.0%
GGATCATCAACAAGCGCTTG+GGG - chr2_1:32081581-32081600 Msa0205370:five_prime_UTR 50.0%
CACCTTCACGACATTCCTGG+TGG - chr2_1:32079274-32079293 Msa0205370:CDS 55.0%
CCTTCACGACATTCCTGGTG+GGG - chr2_1:32079276-32079295 Msa0205370:CDS 55.0%
!!! TCGAATGTTTTGGCCCCACC+AGG + chr2_1:32079292-32079311 None:intergenic 55.0%
GATGCTCTGCAGCACACCAT+AGG + chr2_1:32079375-32079394 None:intergenic 55.0%
!!! GCCCTGGTGGAAGTGTTTTG+TGG - chr2_1:32079638-32079657 Msa0205370:intron 55.0%
!! AAGTCGGGTACTGGACTCAC+CGG + chr2_1:32079863-32079882 None:intergenic 55.0%
ACTTCCAATGCAGAAGGGCC+TGG - chr2_1:32079954-32079973 Msa0205370:intron 55.0%
GCGAAGGTGATCCGATCAAC+TGG + chr2_1:32080236-32080255 None:intergenic 55.0%
!! ATGGTGATGGGTGTCAGCGA+AGG + chr2_1:32080252-32080271 None:intergenic 55.0%
TTCGCTGACACCCATCACCA+TGG - chr2_1:32080251-32080270 Msa0205370:intron 55.0%
CGCAGCAAGGGCTTGAAACT+TGG + chr2_1:32080337-32080356 None:intergenic 55.0%
TCCAGAGTATGCCAGGCCTT+TGG - chr2_1:32080362-32080381 Msa0205370:intron 55.0%
TCCAAAGGCCTGGCATACTC+TGG + chr2_1:32080366-32080385 None:intergenic 55.0%
GTAGTCTCACCCATGGTTGG+TGG - chr2_1:32081196-32081215 Msa0205370:CDS 55.0%
CCTTTCGTTCTGTGCAGCGT+GGG + chr2_1:32081285-32081304 None:intergenic 55.0%
TTGGTCGGATCAAACGAGGG+TGG - chr2_1:32081425-32081444 Msa0205370:five_prime_UTR 55.0%
TCGGATCAAACGAGGGTGGT+TGG - chr2_1:32081429-32081448 Msa0205370:five_prime_UTR 55.0%
CGGATCAAACGAGGGTGGTT+GGG - chr2_1:32081430-32081449 Msa0205370:five_prime_UTR 55.0%
AAACGAGGGTGGTTGGGCAT+CGG - chr2_1:32081436-32081455 Msa0205370:five_prime_UTR 55.0%
CCCCACCAGGAATGTCGTGA+AGG + chr2_1:32079279-32079298 None:intergenic 60.0%
GGACCACCACGCTCCAATAC+CGG + chr2_1:32079610-32079629 None:intergenic 60.0%
CTTCCACCAGGGCTCTGCAA+GGG + chr2_1:32079631-32079650 None:intergenic 60.0%
ACTTCCACCAGGGCTCTGCA+AGG + chr2_1:32079632-32079651 None:intergenic 60.0%
! GGAATCTCGGGGCATTAGGC+AGG - chr2_1:32079768-32079787 Msa0205370:intron 60.0%
TGGAGATACCAAAGCCGCCG+GGG + chr2_1:32079887-32079906 None:intergenic 60.0%
GTGGAGATACCAAAGCCGCC+GGG + chr2_1:32079888-32079907 None:intergenic 60.0%
GGTGGAGATACCAAAGCCGC+CGG + chr2_1:32079889-32079908 None:intergenic 60.0%
TGGACCAGGCCCTTCTGCAT+TGG + chr2_1:32079961-32079980 None:intergenic 60.0%
GCTGACACCCATCACCATGG+TGG - chr2_1:32080254-32080273 Msa0205370:intron 60.0%
!! CTCTGGAACAGCCGCAGCAA+GGG + chr2_1:32080349-32080368 None:intergenic 60.0%
!! ACTCTGGAACAGCCGCAGCA+AGG + chr2_1:32080350-32080369 None:intergenic 60.0%
CGGCTGTTCCAGAGTATGCC+AGG - chr2_1:32080355-32080374 Msa0205370:intron 60.0%
CCCACGCTGCACAGAACGAA+AGG - chr2_1:32081282-32081301 Msa0205370:five_prime_UTR 60.0%
GCCTTTCGTTCTGTGCAGCG+TGG + chr2_1:32081286-32081305 None:intergenic 60.0%
!! TGGTTGGGCATCGGCAGTCA+AGG - chr2_1:32081445-32081464 Msa0205370:five_prime_UTR 60.0%
TTCAGCGTCAGGGCCAAGCC+TGG - chr2_1:32077583-32077602 Msa0205370:intron 65.0%
! TGGCCGGTATTGGAGCGTGG+TGG - chr2_1:32079604-32079623 Msa0205370:intron 65.0%
! GTCCAGTACCCGACTTGCCC+CGG - chr2_1:32079867-32079886 Msa0205370:intron 65.0%
! CATCTGGGGCAACCTCTGCG+AGG + chr2_1:32080299-32080318 None:intergenic 65.0%
! GGGTGGCCGGTATTGGAGCG+TGG - chr2_1:32079601-32079620 Msa0205370:intron 70.0%
GGTGGTCCCTTGCAGAGCCC+TGG - chr2_1:32079622-32079641 Msa0205370:intron 70.0%
GGTCCCTTGCAGAGCCCTGG+TGG - chr2_1:32079625-32079644 Msa0205370:intron 70.0%
! CAGTACCCGACTTGCCCCGG+CGG - chr2_1:32079870-32079889 Msa0205370:intron 70.0%
CAAAGCCGCCGGGGCAAGTC+GGG + chr2_1:32079878-32079897 None:intergenic 70.0%
CCAAAGCCGCCGGGGCAAGT+CGG + chr2_1:32079879-32079898 None:intergenic 70.0%
CGCCGGGGCAAGTCGGGTAC+TGG + chr2_1:32079872-32079891 None:intergenic 75.0%
! CCGACTTGCCCCGGCGGCTT+TGG - chr2_1:32079876-32079895 Msa0205370:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 32076766 32082031 32076766 ID=Msa0205370;Name=Msa0205370
chr2_1 mRNA 32076766 32082031 32076766 ID=Msa0205370-mRNA-1;Parent=Msa0205370;Name=Msa0205370-mRNA-1;_AED=0.01;_eAED=0.01;_QI=750|1|1|1|0.75|0.6|5|244|647
chr2_1 exon 32076766 32077597 32076766 ID=Msa0205370-mRNA-1:exon:11225;Parent=Msa0205370-mRNA-1
chr2_1 exon 32078375 32079601 32078375 ID=Msa0205370-mRNA-1:exon:11224;Parent=Msa0205370-mRNA-1
chr2_1 exon 32080154 32080223 32080154 ID=Msa0205370-mRNA-1:exon:11223;Parent=Msa0205370-mRNA-1
chr2_1 exon 32081193 32081362 32081193 ID=Msa0205370-mRNA-1:exon:11222;Parent=Msa0205370-mRNA-1
chr2_1 exon 32081393 32082031 32081393 ID=Msa0205370-mRNA-1:exon:11221;Parent=Msa0205370-mRNA-1
chr2_1 five_prime_UTR 32081393 32082031 32081393 ID=Msa0205370-mRNA-1:five_prime_utr;Parent=Msa0205370-mRNA-1
chr2_1 five_prime_UTR 32081252 32081362 32081252 ID=Msa0205370-mRNA-1:five_prime_utr;Parent=Msa0205370-mRNA-1
chr2_1 CDS 32081193 32081251 32081193 ID=Msa0205370-mRNA-1:cds;Parent=Msa0205370-mRNA-1
chr2_1 CDS 32080154 32080223 32080154 ID=Msa0205370-mRNA-1:cds;Parent=Msa0205370-mRNA-1
chr2_1 CDS 32078375 32079601 32078375 ID=Msa0205370-mRNA-1:cds;Parent=Msa0205370-mRNA-1
chr2_1 CDS 32077010 32077597 32077010 ID=Msa0205370-mRNA-1:cds;Parent=Msa0205370-mRNA-1
chr2_1 three_prime_UTR 32076766 32077009 32076766 ID=Msa0205370-mRNA-1:three_prime_utr;Parent=Msa0205370-mRNA-1
Gene Sequence

>Msa0205370

ATGGCTTGTGTGAAATTGGGTTCTAAAGCTGATGCATTTCAGCGTCAGGGCCAAGCCTGGTTCTGTACGACCGGGCTTCCCAGCGATATAGTTGTTGAAGTTGGTGAGATGTCTTTCCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGCGGAGTTTTGGAAAGATCAATTGCCAAAGCTTCTGAATCAGAGGAAGAATGCGTCATACACCTTCACGACATTCCTGGTGGGGCCAAAACATTCGAACTCGTTGCGAAATTCTGCTACGGTGTGAAACTCGAACTTACGGCATCAAATGTTGTGTGCCTATGGTGTGCTGCAGAGCATCTTGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTTCCCAAGCCGAAACCTTTTTCAATCAAGTGGTCCTCCGAAGTTGGAAAGACTCCATAAGGGCACTTCAAACTTGTGACGATGTTCTGGACCAAGCTGAAGAGCTTCACATTGTGAAGAGGTGCATTGAATCGCTTGCAGCAAAGGCATCCACTGACCCAAATTTATTTGGGTGGCCGGTATTGGAGCGTGGTGGTCCCTTGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCAAAGAATACAAGTTTAGATTGGTGGTACGAGGATGTAGCAAATTTGAGTTTACCGATTTATAAGAGGTTGATAGCTGTCATGGAATCTCGGGGCATTAGGCAGGAAATCATTGCCGGTTCTCTTGCTTTCTATGCTAAAACGTATTTGCCTGGTTTAAATCGACGTAAGGTTTCCGGTGAGTCCAGTACCCGACTTGCCCCGGCGGCTTTGGTATCTCCACCATCTGAAGAAGATCAAAAAATTCTTCTGGAAGAGATTGATCAACTACTTCCAATGCAGAAGGGCCTGGTCCAAACGAAGTTCCTGTTTGGTCTACTTCGAACGGCCATGATTTTACGAGTGAACCCCTCCTGCATATCAAGTTTGGAGAAACGGATCGGAATGCAGCTTGATCAAGCTGCTTTGGAAGATCTCTTGATGCCAAATTTCTCGTATTCAATGGAGACACTTTACAATGTCGACTGTGTGCAAAGAATTCTTGATCATTTCCTTGCCATGGATCAGATTACAGGTGGTGCGTCTCCATGCTCGATTGATGAAGATGGCCAGTTGATCGGATCACCTTCGCTGACACCCATCACCATGGTGGCAAAACTGATTGATGGTTACCTCGCAGAGGTTGCCCCAGATGTTAACTTAAAACTTCCCAAGTTTCAAGCCCTTGCTGCGGCTGTTCCAGAGTATGCCAGGCCTTTGGATGATGGTTTATATCGTGCCATAGATATTTACTTGAAGTCTCACCCATGGTTGGTGGAGTCAGAAAGAGAGCAACTATGCAGGCTAATGGACTGCCAGAAGCTCTCATTAGAAGCATGCACCCACGCTGCACAGAACGAAAGGCTCCCCATTAGAATCATAGTTCAAGTTCTATTTTTCGAGCAGCTCCAGCTTCGTACTTCAATCGCTGGTTGCTTTCTAGTATCAGACAATCTCGACGGATCAAGAAATTTAAGAAGTGGTTTGGTCGGATCAAACGAGGGTGGTTGGGCATCGGCAGTCAAGGAAAACCAGGTATTGAAAGTAGGGATGGATAACATGAGGATGAGGGTATCTGAACTCGAGAAAGAGTGCTCAAACATGAGGCAAGAGATTGAGAAACTTGGTGGTAAGGCAAAAGGATCATCAACAAGCGCTTGGGGAGTTGTGTCGAAGAAACTCGGGTTTAAGATAAAGTCTCAGATGTGTAGTGCTCAAGAAGGATCTGTTAGCAAACAGAACAATGGGCATAATAATGTTGAGAAGTTGAAGGACAGAAATGTAAAGCATAATAGAAGTTCTTCTATCAGTGACAAAGGATCAGTCTCTTCAATTATTCCTTCTTAG
Protein sequence

>Msa0205370

MACVKLGSKADAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERSIAKASESEEECVIHLHDIPGGAKTFELVAKFCYGVKLELTASNVVCLWCAAEHLEMTEEYGEGNLISQAETFFNQVVLRSWKDSIRALQTCDDVLDQAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNTSLDWWYEDVANLSLPIYKRLIAVMESRGIRQEIIAGSLAFYAKTYLPGLNRRKVSGESSTRLAPAALVSPPSEEDQKILLEEIDQLLPMQKGLVQTKFLFGLLRTAMILRVNPSCISSLEKRIGMQLDQAALEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQITGGASPCSIDEDGQLIGSPSLTPITMVAKLIDGYLAEVAPDVNLKLPKFQALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRNLRSGLVGSNEGGWASAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGGKAKGSSTSAWGVVSKKLGFKIKSQMCSAQEGSVSKQNNGHNNVEKLKDRNVKHNRSSSISDKGSVSSIIPS*