AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0209090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0209090 MtrunA17_Chr2g0307631 96.453 733 19 1 1 733 1 726 0.0 1457
Msa0209090 MtrunA17_Chr8g0378581 50.543 736 340 10 1 727 1 721 0.0 718
Msa0209090 MtrunA17_Chr8g0378931 49.730 742 338 10 1 727 1 722 0.0 695
Msa0209090 MtrunA17_Chr7g0252691 25.424 590 384 20 166 727 165 726 2.87e-33 137
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0209090 AT5G23050.1 67.711 734 223 4 1 733 1 721 0.0 1013
Msa0209090 AT5G23050.2 67.504 597 180 4 1 596 1 584 0.0 811
Msa0209090 AT1G55320.1 48.234 736 352 10 3 727 2 719 0.0 692
Msa0209090 AT1G55320.2 54.403 511 222 4 219 727 2 503 0.0 559
Msa0209090 AT5G36880.6 25.038 655 430 22 102 727 46 668 2.36e-33 137
Msa0209090 AT5G36880.3 25.038 655 430 22 102 727 46 668 2.36e-33 137
Msa0209090 AT5G36880.5 25.038 655 430 22 102 727 46 668 2.36e-33 137
Msa0209090 AT5G36880.1 25.038 655 430 22 102 727 46 668 2.36e-33 137
Msa0209090 AT5G36880.2 25.038 655 430 22 102 727 96 718 3.03e-33 137
Msa0209090 AT5G36880.4 25.389 579 375 21 102 651 46 596 5.36e-27 117

Find 194 sgRNAs with CRISPR-Local

Find 645 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAGGGGTAAAGAGTTTC+TGG 0.130757 2_1:+45940600 Msa0209090:CDS
GTTTCATACCTGTACAAATT+TGG 0.172757 2_1:-45946023 None:intergenic
GGTTTGAGACTGAAAATTTC+TGG 0.177813 2_1:-45940663 None:intergenic
TTGTATTGTTTCAGGTTTAT+TGG 0.214001 2_1:+45940771 Msa0209090:intron
TATGGTTGCTTCAAAGATTA+TGG 0.245998 2_1:+45939691 Msa0209090:CDS
ATTGAAGTGAATTGTAAATA+TGG 0.256189 2_1:+45939471 Msa0209090:exon
AAACTCTAAATCCATTATTC+AGG 0.260045 2_1:+45949013 Msa0209090:CDS
CTCTTGGATCCCTTATGCTT+GGG 0.260664 2_1:+45948063 Msa0209090:CDS
GTTTCTGGGTTCACTGTATA+AGG 0.284467 2_1:+45940615 Msa0209090:CDS
GCTTCAATGGCTTTGTATAA+TGG 0.284939 2_1:+45945977 Msa0209090:CDS
GGGTGCAACATTGAATTAAA+AGG 0.288677 2_1:+45939329 Msa0209090:five_prime_UTR
AAATCAGCAAAGCCTGTAAT+TGG 0.298240 2_1:-45940640 None:intergenic
TTGGTCCATGGAATTGCTTT+TGG 0.305055 2_1:-45945821 None:intergenic
CCAAGTGGTCAATGGCTTCC+TGG 0.309999 2_1:+45940887 Msa0209090:CDS
CTGTATAAGGATCCAATTAC+AGG 0.315621 2_1:+45940628 Msa0209090:CDS
TTTCATCAGATGCTGTATTA+TGG 0.322063 2_1:+45939673 Msa0209090:CDS
ATAAAGCCCTCCCTCTTTAC+AGG 0.326956 2_1:+45945128 Msa0209090:CDS
TACCTAGCTATCGTTCTTGC+AGG 0.327370 2_1:+45943248 Msa0209090:CDS
GGTATCCAAGCGGGCGGGTC+AGG 0.332425 2_1:-45939715 None:intergenic
TTAATAAGTACCCTGAATAA+TGG 0.347220 2_1:-45949024 None:intergenic
GTATATGCATCATTGTTAAA+TGG 0.350280 2_1:+45945953 Msa0209090:CDS
TGCGTAACGGTGACCTTTCA+TGG 0.358514 2_1:+45945330 Msa0209090:CDS
TGAATGACACGGTGATAATA+TGG 0.360894 2_1:+45940963 Msa0209090:CDS
GCTCTTGGATCCCTTATGCT+TGG 0.362666 2_1:+45948062 Msa0209090:CDS
TTGTCACGTAAGATGCATTC+AGG 0.363220 2_1:-45940836 None:intergenic
CTGCTGAATGCTGATCATTA+TGG 0.368454 2_1:+45948098 Msa0209090:CDS
CCACAAAATGTTCCAGGAAT+AGG 0.388472 2_1:+45948032 Msa0209090:CDS
CCTTCTCATAACCTTGTTTG+AGG 0.389200 2_1:-45949157 None:intergenic
TGCGTATGCTCTTGAATCAC+TGG 0.389707 2_1:+45943163 Msa0209090:CDS
TGAAACGAAAACGGAAGTTC+AGG 0.392374 2_1:-45939655 None:intergenic
TTGTTTATTCTTGCTGATGA+TGG 0.394278 2_1:+45947659 Msa0209090:CDS
ATTGTTAAATGGAGCTTCAA+TGG 0.395832 2_1:+45945964 Msa0209090:CDS
CCACCACAATATTCAATGAT+AGG 0.395928 2_1:-45947548 None:intergenic
TGCTCTTGAATCACTGGGTC+TGG 0.402184 2_1:+45943169 Msa0209090:CDS
ATTTCAAGGGAATGCCTCTC+TGG 0.405496 2_1:+45948126 Msa0209090:CDS
GTTTGCTGGCCCACTAATCT+TGG 0.407233 2_1:+45945908 Msa0209090:CDS
AACTATTGCCATAGGAGATT+GGG 0.409276 2_1:-45945273 None:intergenic
CACTAATCTTGGATGGATGA+TGG 0.410831 2_1:+45945919 Msa0209090:CDS
AGAGCTAACTCACCTATTCC+TGG 0.415085 2_1:-45948044 None:intergenic
CAGAATTGCTTGAATTTGAA+TGG 0.415404 2_1:+45940929 Msa0209090:CDS
CTCCAGCTCCGTACAAGACT+TGG 0.417401 2_1:-45947305 None:intergenic
AGGAATTGCGTCAAGAGGTT+TGG 0.417698 2_1:+45941032 Msa0209090:CDS
TAACTATTGCCATAGGAGAT+TGG 0.426580 2_1:-45945274 None:intergenic
TGTTTGATGCCCCAAGCATA+AGG 0.427358 2_1:-45948073 None:intergenic
TCATTATGGTGTCTATTTCA+AGG 0.428112 2_1:+45948112 Msa0209090:CDS
ATTGTGGTGGTACAGAGATT+GGG 0.434744 2_1:+45947561 Msa0209090:CDS
TATTGTGGTGGTACAGAGAT+TGG 0.435937 2_1:+45947560 Msa0209090:CDS
GCCATCGGGATACCACCTTC+TGG 0.438657 2_1:+45948886 Msa0209090:CDS
ACGGAATTAATAGAAATTCA+TGG 0.438816 2_1:+45939583 Msa0209090:CDS
TTTGTAAAATCGCAAATAGA+AGG 0.440115 2_1:+45939308 Msa0209090:five_prime_UTR
CCAGGAAGCCATTGACCACT+TGG 0.443223 2_1:-45940887 None:intergenic
ACTAATCTTGGATGGATGAT+GGG 0.444823 2_1:+45945920 Msa0209090:CDS
ACGCAGTTGCATGCTGAATC+CGG 0.445166 2_1:-45945312 None:intergenic
AATTCCAAGGGATTCAATAT+CGG 0.447053 2_1:-45939524 None:intergenic
GCAGATGATACAATGAATCT+TGG 0.448260 2_1:+45948295 Msa0209090:CDS
ACCACAGATGTACAATTCAT+TGG 0.450525 2_1:-45943221 None:intergenic
CGGCTTTGCCAAATTTGTAC+AGG 0.453722 2_1:+45946015 Msa0209090:CDS
ATTCTACATCCGGCTATGAT+TGG 0.455503 2_1:+45947336 Msa0209090:CDS
TTACAGCCACAAAATGTTCC+AGG 0.457728 2_1:+45948026 Msa0209090:intron
GTAAAGGTGATGTAGTTTGC+TGG 0.460233 2_1:+45945894 Msa0209090:CDS
CACAAGATTTACAGAAATTG+AGG 0.460742 2_1:+45948965 Msa0209090:CDS
ACCTTGTTTGAGGCTGTCCT+TGG 0.462874 2_1:-45949147 None:intergenic
CCATTGACCACTTGGGTATG+AGG 0.465477 2_1:-45940879 None:intergenic
TTCCAAGTCTTGTACGGAGC+TGG 0.467703 2_1:+45947303 Msa0209090:CDS
CGTAGTTGCTTTGCATCCAC+TGG 0.469596 2_1:+45947470 Msa0209090:intron
ATGGTCCTGACCCGCCCGCT+TGG 0.470246 2_1:+45939710 Msa0209090:CDS
AACTCTAAATCCATTATTCA+GGG 0.476877 2_1:+45949014 Msa0209090:CDS
ATTACTGCAGGCTCAGTCAT+TGG 0.477853 2_1:+45947604 Msa0209090:CDS
AACAAATTGCAGCACATCGC+CGG 0.479445 2_1:-45947641 None:intergenic
AAATTCAAGCAATTCTGTGC+AGG 0.479919 2_1:-45940923 None:intergenic
TTTATTGTAGAAGGTAAGAG+AGG 0.480576 2_1:-45949287 None:intergenic
TGCAGATGCGTGGTGCCACT+TGG 0.483354 2_1:+45945865 Msa0209090:CDS
GTTGTTTCGATAGGTGAGTT+CGG 0.483788 2_1:+45948810 Msa0209090:intron
GCTATGATTGGTCTGCTATC+CGG 0.484099 2_1:+45947348 Msa0209090:CDS
CTGAATCCGGAGCCTCTAGT+TGG 0.485876 2_1:-45945299 None:intergenic
TGCAAAAGTCATATTTACTC+AGG 0.486038 2_1:+45943340 Msa0209090:CDS
CGAACGTAGATGAATACCTT+TGG 0.486204 2_1:+45947501 Msa0209090:CDS
CTCAATTTCTGTAAATCTTG+TGG 0.487036 2_1:-45948964 None:intergenic
TCGGGATACCACCTTCTGGT+GGG 0.487293 2_1:+45948890 Msa0209090:CDS
TACGGGTCGGGTATCCAAGC+GGG 0.487626 2_1:-45939724 None:intergenic
TTGTATAATGGATCCCCACT+TGG 0.489785 2_1:+45945989 Msa0209090:CDS
GAATCACTGGGTCTGGAGAA+AGG 0.491276 2_1:+45943176 Msa0209090:CDS
GGTTTATTGGAAAACTGTGC+TGG 0.493042 2_1:+45940784 Msa0209090:intron
TTGTGGAAACAGCTGCCATC+GGG 0.497471 2_1:+45948872 Msa0209090:CDS
CTGTACAAATTTGGCAAAGC+CGG 0.498742 2_1:-45946014 None:intergenic
GTATCCGATATTGAATCCCT+TGG 0.499341 2_1:+45939520 Msa0209090:CDS
AATGAATCTTGGAGGAATCA+AGG 0.499716 2_1:+45948306 Msa0209090:CDS
GGAATAGGTGAGTTAGCTCT+TGG 0.500136 2_1:+45948047 Msa0209090:CDS
ATGTTTGTAAATGTTTCTAC+TGG 0.500526 2_1:-45945614 None:intergenic
AATGGATCCCCACTTGGCTC+CGG 0.500651 2_1:+45945995 Msa0209090:CDS
ATCGGGATACCACCTTCTGG+TGG 0.501807 2_1:+45948889 Msa0209090:CDS
CATTATGGTGTCTATTTCAA+GGG 0.501919 2_1:+45948113 Msa0209090:CDS
AAGGGAATGCCTCTCTGGAA+TGG 0.502368 2_1:+45948131 Msa0209090:CDS
GATGAATACCTTTGGCTGAT+GGG 0.504710 2_1:+45947509 Msa0209090:CDS
AGATGAATACCTTTGGCTGA+TGG 0.505224 2_1:+45947508 Msa0209090:CDS
AGAAATGCAAATTCTACATC+CGG 0.506535 2_1:+45947326 Msa0209090:CDS
GTTATCCCAACTAGAGGCTC+CGG 0.511622 2_1:+45945293 Msa0209090:CDS
AGCATCTGATGAAACGAAAA+CGG 0.513623 2_1:-45939664 None:intergenic
GCTGGCCCACTAATCTTGGA+TGG 0.513777 2_1:+45945912 Msa0209090:CDS
CCTCATACCCAAGTGGTCAA+TGG 0.513890 2_1:+45940879 Msa0209090:CDS
GTTAAGAGAGCATACGGGTC+GGG 0.514536 2_1:-45939736 None:intergenic
CGGGATACCACCTTCTGGTG+GGG 0.515510 2_1:+45948891 Msa0209090:CDS
AAGAGGGGTAAAGAGTTTCT+GGG 0.520650 2_1:+45940601 Msa0209090:CDS
GTGTGATTCCAAGTCTTGTA+CGG 0.520853 2_1:+45947297 Msa0209090:CDS
CGGAGTAGATAGTAATATTG+TGG 0.522745 2_1:+45948855 Msa0209090:CDS
AGTGTTACATTGACGAATGT+TGG 0.524475 2_1:+45940565 Msa0209090:CDS
TTGTGGTGGTACAGAGATTG+GGG 0.524936 2_1:+45947562 Msa0209090:CDS
TGAATCCGGAGCCTCTAGTT+GGG 0.525577 2_1:-45945298 None:intergenic
GATGCTAAAGTAACAATGCT+TGG 0.525722 2_1:+45947275 Msa0209090:CDS
TGTTTATTCTTGCTGATGAT+GGG 0.526507 2_1:+45947660 Msa0209090:CDS
CATCATCCATCCAAGATTAG+TGG 0.527349 2_1:-45945918 None:intergenic
CGTGGTCTCTCGCAATTCCA+AGG 0.529030 2_1:-45939537 None:intergenic
TGGTCGGTTGCTTGAGAAGA+GGG 0.529807 2_1:+45940585 Msa0209090:CDS
TTGTAAAATCGCAAATAGAA+GGG 0.531211 2_1:+45939309 Msa0209090:five_prime_UTR
AACTCTCCACCTGCGTCTCA+CGG 0.534211 2_1:+45939564 Msa0209090:CDS
CTCAAACAAGGTTATGAGAA+GGG 0.538467 2_1:+45949158 Msa0209090:CDS
GGGATACCACCTTCTGGTGG+GGG 0.539711 2_1:+45948892 Msa0209090:CDS
AAGCCTATCATTGAATATTG+TGG 0.541124 2_1:+45947545 Msa0209090:CDS
GAAACGAAAACGGAAGTTCA+GGG 0.542308 2_1:-45939654 None:intergenic
TCTTGGATCCCTTATGCTTG+GGG 0.542370 2_1:+45948064 Msa0209090:CDS
TGTGGATGCCCAATCTCCTA+TGG 0.543453 2_1:+45945265 Msa0209090:CDS
CTATTAATTCCGTGAGACGC+AGG 0.543711 2_1:-45939573 None:intergenic
GAGGATGAACCGTCCTCACC+AGG 0.544024 2_1:-45940860 None:intergenic
TGGCGCAAAACTATCAGCTA+TGG 0.551994 2_1:-45943285 None:intergenic
GGATACAGAGATAGAAGATA+AGG 0.552282 2_1:-45939503 None:intergenic
GATGATACAATGAATCTTGG+AGG 0.554940 2_1:+45948298 Msa0209090:CDS
GAGGCTGTCCTTGGAAGAGA+TGG 0.555835 2_1:-45949138 None:intergenic
GGTCGGGTATCCAAGCGGGC+GGG 0.559168 2_1:-45939720 None:intergenic
TGGCAAAGCCGGAGCCAAGT+GGG 0.563691 2_1:-45946003 None:intergenic
GTGATCCAAAAGCAATTCCA+TGG 0.566214 2_1:+45945816 Msa0209090:CDS
TGTCAGGATCTCATACTTCG+TGG 0.566472 2_1:+45945103 Msa0209090:intron
CGTCACTGGATCATTACTGC+AGG 0.568727 2_1:+45947592 Msa0209090:CDS
TTGGATGGATGATGGGGCCA+TGG 0.568895 2_1:+45945927 Msa0209090:CDS
AGAGGAGTAATATTGGTCCA+TGG 0.570021 2_1:-45945833 None:intergenic
ATCATCCATCCAAGATTAGT+GGG 0.571504 2_1:-45945917 None:intergenic
ACAGCTACAGACAACTGCTC+AGG 0.571958 2_1:-45948916 None:intergenic
GCAGGATTAATCGATGCTCC+AGG 0.573116 2_1:-45940905 None:intergenic
TGCCACTTGGACGTTCGTAA+AGG 0.578559 2_1:+45945878 Msa0209090:CDS
TACGTTCGATGCTTCTCCAG+TGG 0.579680 2_1:-45947486 None:intergenic
AAGATGGTCTCCCTCTTCAA+AGG 0.580818 2_1:+45940999 Msa0209090:CDS
AAAACGGAAGTTCAGGGCTG+AGG 0.582396 2_1:-45939648 None:intergenic
TCAAGTGTCATCCTTTGAAG+AGG 0.583835 2_1:-45941010 None:intergenic
ATTGTGGAAACAGCTGCCAT+CGG 0.586223 2_1:+45948871 Msa0209090:CDS
GTTTGATGCCCCAAGCATAA+GGG 0.591517 2_1:-45948072 None:intergenic
GTTGGGATAACTATTGCCAT+AGG 0.593786 2_1:-45945281 None:intergenic
GTCCTTGGAAGAGATGGCAC+TGG 0.593944 2_1:-45949132 None:intergenic
TGCATCTTACGTGACAATCC+TGG 0.597430 2_1:+45940842 Msa0209090:CDS
CGTGACAATCCTGGTGAGGA+CGG 0.597702 2_1:+45940851 Msa0209090:CDS
GGGTCGGGTATCCAAGCGGG+CGG 0.598636 2_1:-45939721 None:intergenic
CGCCACGTGAAATATCAACC+AGG 0.599497 2_1:+45943303 Msa0209090:CDS
AATGATGCATATACTAGCCA+TGG 0.600506 2_1:-45945944 None:intergenic
GATAGCAGACCAATCATAGC+CGG 0.600611 2_1:-45947345 None:intergenic
ACTTGAGGAATTGCGTCAAG+AGG 0.601240 2_1:+45941027 Msa0209090:CDS
CTAATCTTGGATGGATGATG+GGG 0.601678 2_1:+45945921 Msa0209090:CDS
GTATTTGAGCGTACTTCTAG+AGG 0.601910 2_1:+45948250 Msa0209090:CDS
TTGGTCGGTTGCTTGAGAAG+AGG 0.603512 2_1:+45940584 Msa0209090:CDS
TTCAGCATGCAACTGCGTAA+CGG 0.605673 2_1:+45945317 Msa0209090:CDS
TCCCAAATGCAGTAGAGTTG+TGG 0.606869 2_1:+45945247 Msa0209090:intron
TAAAAGCTGCTGCAGATGCG+TGG 0.607205 2_1:+45945855 Msa0209090:CDS
TACCAGTGCCATCTCTTCCA+AGG 0.607221 2_1:+45949130 Msa0209090:CDS
GCGTATGCTCTTGAATCACT+GGG 0.609635 2_1:+45943164 Msa0209090:CDS
CCTCAAACAAGGTTATGAGA+AGG 0.610766 2_1:+45949157 Msa0209090:CDS
TCATGTAAAATACAGAGGCA+AGG 0.615184 2_1:+45945571 Msa0209090:intron
CAAGTGTCATCCTTTGAAGA+GGG 0.616887 2_1:-45941009 None:intergenic
GGCAAAGCCGGAGCCAAGTG+GGG 0.618733 2_1:-45946002 None:intergenic
GTGGTCTCTCGCAATTCCAA+GGG 0.619247 2_1:-45939536 None:intergenic
TCCAAGGACAGCCTCAAACA+AGG 0.622443 2_1:+45949146 Msa0209090:CDS
CACCTTTACGAACGTCCAAG+TGG 0.624594 2_1:-45945880 None:intergenic
TCTTCAAAGGATGACACTTG+AGG 0.625524 2_1:+45941012 Msa0209090:CDS
CAGGAAGCCATTGACCACTT+GGG 0.627950 2_1:-45940886 None:intergenic
AGCCTGGTTGATATTTCACG+TGG 0.628870 2_1:-45943305 None:intergenic
GCAATAGTTATCCCAACTAG+AGG 0.631298 2_1:+45945287 Msa0209090:CDS
CAAAAGAAATTTGAATGACA+CGG 0.631430 2_1:+45940952 Msa0209090:CDS
GAAATTGAACGCATATGCAA+CGG 0.631869 2_1:+45948835 Msa0209090:CDS
AAGCTCTTCCCATCAGCCAA+AGG 0.637210 2_1:-45947517 None:intergenic
AACCTGCAAGAACGATAGCT+AGG 0.637454 2_1:-45943250 None:intergenic
ACCAGAAGGTGGTATCCCGA+TGG 0.638315 2_1:-45948887 None:intergenic
CCTATCATTGAATATTGTGG+TGG 0.640679 2_1:+45947548 Msa0209090:CDS
TGGCGTGATGAACTACAAGA+TGG 0.642548 2_1:+45940983 Msa0209090:CDS
CTTGCTGATGTTGTGCCACG+TGG 0.645928 2_1:-45939620 None:intergenic
TTGGCAAAGCCGGAGCCAAG+TGG 0.645965 2_1:-45946004 None:intergenic
AATGCCTCTCTGGAATGGAA+AGG 0.647832 2_1:+45948136 Msa0209090:CDS
GGTCGGTTGCTTGAGAAGAG+GGG 0.647991 2_1:+45940586 Msa0209090:CDS
TTACATTGACGAATGTTGGT+CGG 0.649277 2_1:+45940569 Msa0209090:CDS
TTAATTCCGTGAGACGCAGG+TGG 0.656956 2_1:-45939570 None:intergenic
GCCAATGAATTGTACATCTG+TGG 0.666720 2_1:+45943220 Msa0209090:CDS
AGAGGATACTATCATGCACA+TGG 0.684640 2_1:+45948268 Msa0209090:CDS
CTTACGTGACAATCCTGGTG+AGG 0.695639 2_1:+45940847 Msa0209090:CDS
ATACGGGTCGGGTATCCAAG+CGG 0.702012 2_1:-45939725 None:intergenic
TGTGGTGGTACAGAGATTGG+GGG 0.703383 2_1:+45947563 Msa0209090:CDS
TCTACCTTTCCATTCCAGAG+AGG 0.716419 2_1:-45948140 None:intergenic
GCAGGTGGAGAGTTGCAGCG+TGG 0.736414 2_1:-45939555 None:intergenic
GGTTCATCCTCATACCCAAG+TGG 0.740054 2_1:+45940872 Msa0209090:CDS
GAACTGATGCATCTGCCACG+TGG 0.760171 2_1:+45939605 Msa0209090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTTTTATATT+TGG + chr2_1:45940728-45940747 Msa0209090:intron 0.0%
!! AATAAATAATAAGATTATCT+TGG - chr2_1:45940700-45940719 None:intergenic 10.0%
!!! ATAATTTTTAAGAGTATTTT+TGG - chr2_1:45942667-45942686 None:intergenic 10.0%
!! AAAATAAATATTATCAACTT+CGG - chr2_1:45942950-45942969 None:intergenic 10.0%
!!! TTGAAAATTTTCTTATATAT+AGG - chr2_1:45943691-45943710 None:intergenic 10.0%
!!! AAAATTTTCAAAAAAATTGT+TGG + chr2_1:45943700-45943719 Msa0209090:intron 10.0%
!!! TGTTGAAATTATTTTAATAT+AGG - chr2_1:45944946-45944965 None:intergenic 10.0%
!! TATTTATAGTTATAGAATTT+CGG + chr2_1:45945406-45945425 Msa0209090:intron 10.0%
!!! TATTTTACATGATAATAAAT+GGG - chr2_1:45945563-45945582 None:intergenic 10.0%
!! TATATATATATATCATAGTT+TGG + chr2_1:45946336-45946355 Msa0209090:intron 10.0%
!!! TTTTAATTGTTGAATTTTAT+TGG + chr2_1:45946391-45946410 Msa0209090:intron 10.0%
!! TCTCATTTAATAATAAAAAA+TGG + chr2_1:45946558-45946577 Msa0209090:intron 10.0%
!! GAAAAATAAGCTATAAAAAA+AGG + chr2_1:45940187-45940206 Msa0209090:intron 15.0%
!! ATTAAACAATTCATAACAAA+TGG - chr2_1:45941077-45941096 None:intergenic 15.0%
!!! ATTTGTTATGAATTGTTTAA+TGG + chr2_1:45941076-45941095 Msa0209090:intron 15.0%
!!! AAAATGTAAAAGTATCTTTT+AGG - chr2_1:45942356-45942375 None:intergenic 15.0%
!! TACTCTTAAAAATTATGTTA+TGG + chr2_1:45942671-45942690 Msa0209090:intron 15.0%
!! AAAGTAATCAAAAGATATTA+GGG - chr2_1:45943372-45943391 None:intergenic 15.0%
!! AAAAGTAATCAAAAGATATT+AGG - chr2_1:45943373-45943392 None:intergenic 15.0%
!!! TTTTATTACTGTTGATTATT+TGG + chr2_1:45943446-45943465 Msa0209090:intron 15.0%
!!! TTTATTACTGTTGATTATTT+GGG + chr2_1:45943447-45943466 Msa0209090:intron 15.0%
!!! TATAATAGATAAAGTATCTT+AGG - chr2_1:45943657-45943676 None:intergenic 15.0%
!!! TGTGATATTTTCTTATAAAT+AGG - chr2_1:45943727-45943746 None:intergenic 15.0%
!! AAAAGACAAACATTAAATAA+GGG - chr2_1:45943789-45943808 None:intergenic 15.0%
!! AAAAAGACAAACATTAAATA+AGG - chr2_1:45943790-45943809 None:intergenic 15.0%
!!! TAAGATTTTATTTGTTTTGA+AGG - chr2_1:45944700-45944719 None:intergenic 15.0%
!! ATTATGAATCTAGTAAAAAT+AGG + chr2_1:45944832-45944851 Msa0209090:intron 15.0%
!!! AAATTATTTTAATATAGGCA+GGG - chr2_1:45944941-45944960 None:intergenic 15.0%
!! ATATCAAATTATTGATAAAC+AGG - chr2_1:45945204-45945223 None:intergenic 15.0%
!!! GTATTTTACATGATAATAAA+TGG - chr2_1:45945564-45945583 None:intergenic 15.0%
!!! TTTTATTATTGTTAGTTCTT+GGG - chr2_1:45946529-45946548 None:intergenic 15.0%
!!! ATTTTATTATTGTTAGTTCT+TGG - chr2_1:45946530-45946549 None:intergenic 15.0%
!!! AGCTTTCAATTTTTTTTTAA+AGG - chr2_1:45946831-45946850 None:intergenic 15.0%
!! TTAAGTATTTAATCATCTAT+TGG - chr2_1:45947982-45948001 None:intergenic 15.0%
!! AATAATGTAGTTTGATTATT+AGG + chr2_1:45948352-45948371 Msa0209090:intron 15.0%
!!! TATTTTATACAACAAAGTTA+AGG - chr2_1:45948415-45948434 None:intergenic 15.0%
!!! ATTGTTATATTTTAGAACTT+TGG - chr2_1:45949212-45949231 None:intergenic 15.0%
!!! TGTTATTACTTTTGAATTTC+AGG + chr2_1:45939414-45939433 Msa0209090:intron 20.0%
!! ATTGAAGTGAATTGTAAATA+TGG + chr2_1:45939471-45939490 Msa0209090:exon 20.0%
!!! TTCTTTAGTTTGTTTGAAAA+TGG + chr2_1:45939789-45939808 Msa0209090:intron 20.0%
!! AATAATAAGATTATCTTGGA+TGG - chr2_1:45940696-45940715 None:intergenic 20.0%
!!! TTGTTATTTTGTATTGTTTC+AGG + chr2_1:45940763-45940782 Msa0209090:intron 20.0%
!!! AAAACATCGTCTTTAAAAAT+TGG - chr2_1:45941125-45941144 None:intergenic 20.0%
!! AACAAACATTTGTTTAAGAA+AGG - chr2_1:45941233-45941252 None:intergenic 20.0%
!! CAATTGAATTTGACAAAATA+AGG + chr2_1:45941364-45941383 Msa0209090:intron 20.0%
!!! GTTTTAGAATAAATATAGAC+AGG + chr2_1:45941649-45941668 Msa0209090:intron 20.0%
!!! TTCTATCAACTTTGTTTTAA+AGG + chr2_1:45942007-45942026 Msa0209090:intron 20.0%
!! CAAAAAAAATTCTGACAATA+GGG - chr2_1:45942081-45942100 None:intergenic 20.0%
!!! TATTGAAATTTGGTAGATTT+TGG + chr2_1:45942242-45942261 Msa0209090:intron 20.0%
!!! CTTTTACATTTTATGAGATT+TGG + chr2_1:45942364-45942383 Msa0209090:intron 20.0%
!!! GAAATTTTTATCTCATTCTT+AGG - chr2_1:45942645-45942664 None:intergenic 20.0%
!!! ATCTACCATCTATATTTTTT+TGG - chr2_1:45943000-45943019 None:intergenic 20.0%
!!! GTAGACTTTTGAATTTAAAA+TGG + chr2_1:45943045-45943064 Msa0209090:intron 20.0%
!! ACAGTAATAAAACAATTACT+TGG - chr2_1:45943438-45943457 None:intergenic 20.0%
!!! AATTTTCTTATATATAGGAC+CGG - chr2_1:45943686-45943705 None:intergenic 20.0%
!!! AGAAAATATCACAACTTTTA+AGG + chr2_1:45943734-45943753 Msa0209090:intron 20.0%
!! AAAGACAAACATTAAATAAG+GGG - chr2_1:45943788-45943807 None:intergenic 20.0%
!!! TGGTTTTTCTTCTTATATTA+AGG + chr2_1:45943917-45943936 Msa0209090:intron 20.0%
!! AAATAGTGATAAAACATTGA+CGG + chr2_1:45944293-45944312 Msa0209090:intron 20.0%
!! ATTTGTTCCATTAGTTAATT+AGG + chr2_1:45944809-45944828 Msa0209090:intron 20.0%
!! TCATAATCCTAATTAACTAA+TGG - chr2_1:45944819-45944838 None:intergenic 20.0%
!!! ATTTGATATCGATTATGTAA+AGG - chr2_1:45944881-45944900 None:intergenic 20.0%
!!! GAAATTATTTTAATATAGGC+AGG - chr2_1:45944942-45944961 None:intergenic 20.0%
!! TATTATCATGTAAAATACAG+AGG + chr2_1:45945566-45945585 Msa0209090:intron 20.0%
!! AAATATGTAAAATTTCAGGA+CGG - chr2_1:45945682-45945701 None:intergenic 20.0%
!! GTCTAAATATGTAAAATTTC+AGG - chr2_1:45945686-45945705 None:intergenic 20.0%
!!! GGTATATTTCTTTTTTATGT+TGG - chr2_1:45946508-45946527 None:intergenic 20.0%
!!! AGATTAGCTATATAAAAAGA+CGG + chr2_1:45946689-45946708 Msa0209090:intron 20.0%
!!! TTTAAAATTTACGAACAGTT+CGG - chr2_1:45946909-45946928 None:intergenic 20.0%
!! TATGTATATCTAATGTTGAT+AGG - chr2_1:45947059-45947078 None:intergenic 20.0%
!! TTGTAATAATAAAGACATAC+AGG - chr2_1:45947832-45947851 None:intergenic 20.0%
!!! CATTTGAATTTTTACAAGAT+TGG - chr2_1:45947917-45947936 None:intergenic 20.0%
!! AGAAATTGAAGATATCATAA+AGG - chr2_1:45948177-45948196 None:intergenic 20.0%
!! AAAGTGTAACAATTCAAAAT+TGG + chr2_1:45948434-45948453 Msa0209090:intron 20.0%
!!! ATTAGTTATTTTCAGTAACT+AGG - chr2_1:45948605-45948624 None:intergenic 20.0%
!! AGAATCTATATTAAGTGAAA+AGG - chr2_1:45948700-45948719 None:intergenic 20.0%
!!! ATAATGGATTTAGAGTTTTT+TGG - chr2_1:45949011-45949030 None:intergenic 20.0%
! TTTGTAAAATCGCAAATAGA+AGG + chr2_1:45939308-45939327 Msa0209090:five_prime_UTR 25.0%
! TTGTAAAATCGCAAATAGAA+GGG + chr2_1:45939309-45939328 Msa0209090:five_prime_UTR 25.0%
! ACGGAATTAATAGAAATTCA+TGG + chr2_1:45939583-45939602 Msa0209090:CDS 25.0%
!! TAGCTTATCTTTTATACAAG+TGG - chr2_1:45940335-45940354 None:intergenic 25.0%
! TAAGAATGTACAAAAATTGC+TGG - chr2_1:45940403-45940422 None:intergenic 25.0%
!!! ACATTTTCGTTTTTTCAGTT+AGG + chr2_1:45940423-45940442 Msa0209090:intron 25.0%
!!! CATTTTCGTTTTTTCAGTTA+GGG + chr2_1:45940424-45940443 Msa0209090:intron 25.0%
! AGTTGTGATTATGAAGTAAA+AGG + chr2_1:45940508-45940527 Msa0209090:intron 25.0%
!!! TTCTTTTGTTTGTTGTGATT+AGG + chr2_1:45940539-45940558 Msa0209090:intron 25.0%
!!! TCTTTTGTTTGTTGTGATTA+GGG + chr2_1:45940540-45940559 Msa0209090:intron 25.0%
! CAAAATAACAATGACAAACA+CGG - chr2_1:45940754-45940773 None:intergenic 25.0%
!!! TTGTATTGTTTCAGGTTTAT+TGG + chr2_1:45940771-45940790 Msa0209090:intron 25.0%
! CAAAAGAAATTTGAATGACA+CGG + chr2_1:45940952-45940971 Msa0209090:CDS 25.0%
! ACAATTCATAACAAATGGAT+AGG - chr2_1:45941072-45941091 None:intergenic 25.0%
!! ATGTTTGTTAGATAAAACAG+AGG + chr2_1:45941244-45941263 Msa0209090:intron 25.0%
!! TGTTTGTTAGATAAAACAGA+GGG + chr2_1:45941245-45941264 Msa0209090:intron 25.0%
! GGAAGGAAATAAACTTAATT+AGG + chr2_1:45941403-45941422 Msa0209090:intron 25.0%
! GGAAATAAACTTAATTAGGA+AGG + chr2_1:45941407-45941426 Msa0209090:intron 25.0%
!!! GGATATTTCTGATTTGTTAT+GGG + chr2_1:45941691-45941710 Msa0209090:intron 25.0%
! TCTACTATTAAAGTGTACTT+TGG + chr2_1:45941885-45941904 Msa0209090:intron 25.0%
! CCAAAAAAAATTCTGACAAT+AGG - chr2_1:45942082-45942101 None:intergenic 25.0%
!!! CCTATTGTCAGAATTTTTTT+TGG + chr2_1:45942079-45942098 Msa0209090:intron 25.0%
! ACGAAATTGAATTTATACTC+TGG - chr2_1:45942214-45942233 None:intergenic 25.0%
! AGAGTATAAATTCAATTTCG+TGG + chr2_1:45942213-45942232 Msa0209090:intron 25.0%
!!! AAATTTGGTAGATTTTGGTT+TGG + chr2_1:45942247-45942266 Msa0209090:intron 25.0%
! TCTATATTCTCTGGTATAAT+TGG - chr2_1:45942274-45942293 None:intergenic 25.0%
! ACGATAGCAAAGAATATAAA+CGG + chr2_1:45942293-45942312 Msa0209090:intron 25.0%
!! TTTAGGACATCATAAAGTTA+GGG - chr2_1:45942339-45942358 None:intergenic 25.0%
!!! TTTTAGGACATCATAAAGTT+AGG - chr2_1:45942340-45942359 None:intergenic 25.0%
!! TTTGAAGCAATATTGTCAAT+AGG + chr2_1:45942488-45942507 Msa0209090:intron 25.0%
! TTGAAGCAATATTGTCAATA+GGG + chr2_1:45942489-45942508 Msa0209090:intron 25.0%
!! ATTATGTTATGGTTTTTGAC+TGG + chr2_1:45942682-45942701 Msa0209090:intron 25.0%
!!! TTATGTTATGGTTTTTGACT+GGG + chr2_1:45942683-45942702 Msa0209090:intron 25.0%
! TCGCAATTAAAACAAAATAC+CGG + chr2_1:45942720-45942739 Msa0209090:intron 25.0%
! ACGATTTATACTATGTACAT+AGG - chr2_1:45942844-45942863 None:intergenic 25.0%
!!! TATATTTTTTTGGCACAAGT+TGG - chr2_1:45942990-45943009 None:intergenic 25.0%
! TTGTGCCAAAAAAATATAGA+TGG + chr2_1:45942992-45943011 Msa0209090:intron 25.0%
! ATTTGTTTCCTCGTTAAATT+TGG - chr2_1:45943585-45943604 None:intergenic 25.0%
!!! ATGCTACACAATTTTTTATG+AGG + chr2_1:45943830-45943849 Msa0209090:intron 25.0%
!!! TGCTACACAATTTTTTATGA+GGG + chr2_1:45943831-45943850 Msa0209090:intron 25.0%
!!! GTATTGGTTTTGATGTTTTT+TGG + chr2_1:45943897-45943916 Msa0209090:intron 25.0%
! TTTCTTCTTATATTAAGGAC+CGG + chr2_1:45943922-45943941 Msa0209090:intron 25.0%
!!! ATTTTTTCCTTAAGTGTGTT+CGG - chr2_1:45944020-45944039 None:intergenic 25.0%
! TTGTGACAAATTCTTTCTAA+AGG - chr2_1:45944142-45944161 None:intergenic 25.0%
!! TCACTATTTTACCTGTTTTA+TGG - chr2_1:45944282-45944301 None:intergenic 25.0%
! TAAATGATCAACTAGTACAA+AGG - chr2_1:45944338-45944357 None:intergenic 25.0%
! ATTTAGGAAGAAACTAAAGT+AGG - chr2_1:45944672-45944691 None:intergenic 25.0%
!!! TGTTTTGAAGGTTAACATTT+AGG - chr2_1:45944688-45944707 None:intergenic 25.0%
!! TCCTTTTAACAGTTTAGTAA+TGG + chr2_1:45945157-45945176 Msa0209090:intron 25.0%
! TCCATTACTAAACTGTTAAA+AGG - chr2_1:45945161-45945180 None:intergenic 25.0%
!! ATGTTTGTAAATGTTTCTAC+TGG - chr2_1:45945617-45945636 None:intergenic 25.0%
! ATCTTGATACAAGAAATTTG+AGG + chr2_1:45945710-45945729 Msa0209090:intron 25.0%
! CTTCAATCACTTTATTAATC+TGG + chr2_1:45945758-45945777 Msa0209090:intron 25.0%
! GTATATGCATCATTGTTAAA+TGG + chr2_1:45945953-45945972 Msa0209090:CDS 25.0%
! TTGATAGGAAAGAAAAGATA+CGG - chr2_1:45946077-45946096 None:intergenic 25.0%
!! ATCTTTTCTTTCCTATCAAT+AGG + chr2_1:45946078-45946097 Msa0209090:intron 25.0%
!! TCTTTTCTTTCCTATCAATA+GGG + chr2_1:45946079-45946098 Msa0209090:intron 25.0%
!!! GAAGTGAAAAAAGTATTTTG+AGG + chr2_1:45946358-45946377 Msa0209090:intron 25.0%
!! ATATCTAATGTTGATAGGTA+GGG - chr2_1:45947054-45947073 None:intergenic 25.0%
!! TATATCTAATGTTGATAGGT+AGG - chr2_1:45947055-45947074 None:intergenic 25.0%
! AAAATTGGTAGAACAATGTA+AGG + chr2_1:45948449-45948468 Msa0209090:intron 25.0%
! TATATGATATCAACATCCAT+AGG + chr2_1:45948514-45948533 Msa0209090:intron 25.0%
!!! TTCGTCTTTGGAATAAAAAT+TGG + chr2_1:45948555-45948574 Msa0209090:intron 25.0%
!!! TCGTCTTTGGAATAAAAATT+GGG + chr2_1:45948556-45948575 Msa0209090:intron 25.0%
! AAACTCTAAATCCATTATTC+AGG + chr2_1:45949013-45949032 Msa0209090:CDS 25.0%
! AACTCTAAATCCATTATTCA+GGG + chr2_1:45949014-45949033 Msa0209090:CDS 25.0%
! TTAATAAGTACCCTGAATAA+TGG - chr2_1:45949027-45949046 None:intergenic 25.0%
!! CGTAAAGTTTTTATTGTAGA+AGG - chr2_1:45949299-45949318 None:intergenic 25.0%
AATTCCAAGGGATTCAATAT+CGG - chr2_1:45939527-45939546 None:intergenic 30.0%
TTTCATCAGATGCTGTATTA+TGG + chr2_1:45939673-45939692 Msa0209090:CDS 30.0%
TATGGTTGCTTCAAAGATTA+TGG + chr2_1:45939691-45939710 Msa0209090:CDS 30.0%
! TGCTATTTGTGTTACTACTA+TGG + chr2_1:45939921-45939940 Msa0209090:intron 30.0%
!! CAAGTTGTTGATTTCTTCAT+CGG + chr2_1:45939987-45940006 Msa0209090:intron 30.0%
ATAATTGACGATGGTCTAAT+TGG + chr2_1:45940015-45940034 Msa0209090:intron 30.0%
AAACAGATACTACACTAACT+AGG - chr2_1:45940099-45940118 None:intergenic 30.0%
GTCTAAACTAAATGACTCTT+GGG - chr2_1:45940155-45940174 None:intergenic 30.0%
AGTCTAAACTAAATGACTCT+TGG - chr2_1:45940156-45940175 None:intergenic 30.0%
CAGAATTGCTTGAATTTGAA+TGG + chr2_1:45940929-45940948 Msa0209090:CDS 30.0%
CAAATTCAATTGTGAGTGAT+TGG - chr2_1:45941356-45941375 None:intergenic 30.0%
TAAGGATGCAACTAGTTATA+AGG + chr2_1:45941382-45941401 Msa0209090:intron 30.0%
ACAATCTGCAAAAATGGAAA+TGG + chr2_1:45941452-45941471 Msa0209090:intron 30.0%
TCATAAGAAGTCTAACAGAA+AGG - chr2_1:45941557-45941576 None:intergenic 30.0%
TTCTGTTAGACTTCTTATGA+TGG + chr2_1:45941557-45941576 Msa0209090:intron 30.0%
TCAGTTATGTATAGCAGTTA+TGG + chr2_1:45941611-45941630 Msa0209090:intron 30.0%
CAGTTATGTATAGCAGTTAT+GGG + chr2_1:45941612-45941631 Msa0209090:intron 30.0%
AGGAAAGATGAAAGTGATTA+TGG + chr2_1:45941669-45941688 Msa0209090:intron 30.0%
GGAAAGATGAAAGTGATTAT+GGG + chr2_1:45941670-45941689 Msa0209090:intron 30.0%
!! GGGATATTTCTGATTTGTTA+TGG + chr2_1:45941690-45941709 Msa0209090:intron 30.0%
!! TATTTCTGATTTGTTATGGG+AGG + chr2_1:45941694-45941713 Msa0209090:intron 30.0%
!! ATTTCTGATTTGTTATGGGA+GGG + chr2_1:45941695-45941714 Msa0209090:intron 30.0%
TAAAAATGGATGACAAAACC+AGG - chr2_1:45941973-45941992 None:intergenic 30.0%
TAAAGGTCATTAATCAACCA+AGG + chr2_1:45942024-45942043 Msa0209090:intron 30.0%
ACATGAAGTTCAACAACTTA+AGG - chr2_1:45942054-45942073 None:intergenic 30.0%
CTCATAAAAGCTATCATTTG+TGG - chr2_1:45942151-45942170 None:intergenic 30.0%
!!! ATCAGCTAACATTTTCAAGT+TGG - chr2_1:45942179-45942198 None:intergenic 30.0%
ACTTGAAAATGTTAGCTGAT+AGG + chr2_1:45942179-45942198 Msa0209090:intron 30.0%
ATAGCAAAGAATATAAACGG+TGG + chr2_1:45942296-45942315 Msa0209090:intron 30.0%
! TACATTTTATGAGATTTGGC+TGG + chr2_1:45942368-45942387 Msa0209090:intron 30.0%
TTTCTGTCTTTCTTAGAGAA+AGG + chr2_1:45942424-45942443 Msa0209090:intron 30.0%
! TTTTATCTCATTCTTAGGTG+CGG - chr2_1:45942640-45942659 None:intergenic 30.0%
ATATTATCAACTTCGGATAG+TGG - chr2_1:45942943-45942962 None:intergenic 30.0%
TACCATGAATTGAAAAACTG+TGG - chr2_1:45943028-45943047 None:intergenic 30.0%
!! TGCATTTGATATTTTAAGCC+TGG - chr2_1:45943324-45943343 None:intergenic 30.0%
TGCAAAAGTCATATTTACTC+AGG + chr2_1:45943340-45943359 Msa0209090:CDS 30.0%
!! GATTATTTGGGATTTTAAGC+AGG + chr2_1:45943459-45943478 Msa0209090:intron 30.0%
TTCCTCGTTAAATTTGGATT+AGG - chr2_1:45943579-45943598 None:intergenic 30.0%
ATATGATGAATCTTTGCAAG+TGG + chr2_1:45943611-45943630 Msa0209090:intron 30.0%
TATGATGAATCTTTGCAAGT+GGG + chr2_1:45943612-45943631 Msa0209090:intron 30.0%
TTTATCTATTATACTCCCTC+CGG + chr2_1:45943664-45943683 Msa0209090:intron 30.0%
ACCTAAAAAAGCCATAAAAC+AGG + chr2_1:45944268-45944287 Msa0209090:intron 30.0%
!! ACCTGTTTTATGGCTTTTTT+AGG - chr2_1:45944272-45944291 None:intergenic 30.0%
GTACTAGTTGATCATTTAGA+TGG + chr2_1:45944340-45944359 Msa0209090:intron 30.0%
! TATTTTATAGCGACTTGTGT+TGG + chr2_1:45944420-45944439 Msa0209090:intron 30.0%
AAAGATTCATCAAAGCTCTT+GGG - chr2_1:45944470-45944489 None:intergenic 30.0%
GATGATAAATGGAAAACTCT+TGG - chr2_1:45944559-45944578 None:intergenic 30.0%
GACAGTGAAATGATGATAAA+TGG - chr2_1:45944570-45944589 None:intergenic 30.0%
AAATACCCCTAATTGTCTTA+TGG + chr2_1:45944644-45944663 Msa0209090:intron 30.0%
TAGGTTCCATAAGACAATTA+GGG - chr2_1:45944653-45944672 None:intergenic 30.0%
! AGGATTTTTACCTGTAAAGA+GGG - chr2_1:45945141-45945160 None:intergenic 30.0%
! AAGGATTTTTACCTGTAAAG+AGG - chr2_1:45945142-45945161 None:intergenic 30.0%
GGAAATGCAAAAACATTGTT+AGG + chr2_1:45945427-45945446 Msa0209090:intron 30.0%
CATGATAATAAATGGGAATG+AGG - chr2_1:45945556-45945575 None:intergenic 30.0%
! ACAAACATTCTCTTTTCTTC+TGG + chr2_1:45945629-45945648 Msa0209090:CDS 30.0%
GTCAGACAACAATAAGATTT+GGG - chr2_1:45945784-45945803 None:intergenic 30.0%
AGTCAGACAACAATAAGATT+TGG - chr2_1:45945785-45945804 None:intergenic 30.0%
!! AGCTTTTAGAGGAGTAATAT+TGG - chr2_1:45945843-45945862 None:intergenic 30.0%
ATTGTTAAATGGAGCTTCAA+TGG + chr2_1:45945964-45945983 Msa0209090:CDS 30.0%
GTTTCATACCTGTACAAATT+TGG - chr2_1:45946026-45946045 None:intergenic 30.0%
! TCAAAATTATGATGGAAGGA+TGG - chr2_1:45946048-45946067 None:intergenic 30.0%
! TCCTTCCATCATAATTTTGA+TGG + chr2_1:45946048-45946067 Msa0209090:intron 30.0%
! ACCATCAAAATTATGATGGA+AGG - chr2_1:45946052-45946071 None:intergenic 30.0%
TGATAGGAAAGAAAAGATAC+GGG - chr2_1:45946076-45946095 None:intergenic 30.0%
ATTTCGAACTATATTCGAGT+TGG - chr2_1:45946121-45946140 None:intergenic 30.0%
AACTACATATAGCTCAAGTT+CGG - chr2_1:45946231-45946250 None:intergenic 30.0%
AAGTTAAAATAGTCCCACAT+CGG + chr2_1:45946644-45946663 Msa0209090:intron 30.0%
TAAGTTTCCACGATTAAGAT+GGG + chr2_1:45947170-45947189 Msa0209090:intron 30.0%
TTACTTTAGCATCCTAAACA+GGG - chr2_1:45947268-45947287 None:intergenic 30.0%
AGAAATGCAAATTCTACATC+CGG + chr2_1:45947326-45947345 Msa0209090:CDS 30.0%
ATCATAAATTCGCATTCATG+TGG - chr2_1:45947417-45947436 None:intergenic 30.0%
AAGCCTATCATTGAATATTG+TGG + chr2_1:45947545-45947564 Msa0209090:CDS 30.0%
TTGTTTATTCTTGCTGATGA+TGG + chr2_1:45947659-45947678 Msa0209090:CDS 30.0%
TGTTTATTCTTGCTGATGAT+GGG + chr2_1:45947660-45947679 Msa0209090:CDS 30.0%
GAATGAATAGTGCTTACAAT+AGG - chr2_1:45947689-45947708 None:intergenic 30.0%
TCATTATGGTGTCTATTTCA+AGG + chr2_1:45948112-45948131 Msa0209090:CDS 30.0%
CATTATGGTGTCTATTTCAA+GGG + chr2_1:45948113-45948132 Msa0209090:CDS 30.0%
TTTGATTATTAGGTAATGCC+TGG + chr2_1:45948362-45948381 Msa0209090:intron 30.0%
!! CGTCTTTGGAATAAAAATTG+GGG + chr2_1:45948557-45948576 Msa0209090:intron 30.0%
!! ACATATCATGTTGTTTCGAT+AGG + chr2_1:45948801-45948820 Msa0209090:intron 30.0%
CTCAATTTCTGTAAATCTTG+TGG - chr2_1:45948967-45948986 None:intergenic 30.0%
CACAAGATTTACAGAAATTG+AGG + chr2_1:45948965-45948984 Msa0209090:CDS 30.0%
TTCATCGTCATAGTATAGTT+TGG + chr2_1:45949066-45949085 Msa0209090:intron 30.0%
TTTATTGTAGAAGGTAAGAG+AGG - chr2_1:45949290-45949309 None:intergenic 30.0%
GGGTGCAACATTGAATTAAA+AGG + chr2_1:45939329-45939348 Msa0209090:five_prime_UTR 35.0%
GGATACAGAGATAGAAGATA+AGG - chr2_1:45939506-45939525 None:intergenic 35.0%
AGCATCTGATGAAACGAAAA+CGG - chr2_1:45939667-45939686 None:intergenic 35.0%
! ATAGTGTTAAGAGAGCATAC+GGG - chr2_1:45939744-45939763 None:intergenic 35.0%
! GATAGTGTTAAGAGAGCATA+CGG - chr2_1:45939745-45939764 None:intergenic 35.0%
GTTTGTTTGAAAATGGACAC+CGG + chr2_1:45939796-45939815 Msa0209090:intron 35.0%
! ATACATTTCATCTGAAGCGT+CGG + chr2_1:45939898-45939917 Msa0209090:intron 35.0%
!! TGGTCTAATTGGTAATGGTT+TGG + chr2_1:45940026-45940045 Msa0209090:intron 35.0%
AGCTATAAAAAAAGGCAGTC+TGG + chr2_1:45940195-45940214 Msa0209090:intron 35.0%
AGTGTTACATTGACGAATGT+TGG + chr2_1:45940565-45940584 Msa0209090:CDS 35.0%
TTACATTGACGAATGTTGGT+CGG + chr2_1:45940569-45940588 Msa0209090:CDS 35.0%
CTGTATAAGGATCCAATTAC+AGG + chr2_1:45940628-45940647 Msa0209090:CDS 35.0%
AAATCAGCAAAGCCTGTAAT+TGG - chr2_1:45940643-45940662 None:intergenic 35.0%
! GGTTTGAGACTGAAAATTTC+TGG - chr2_1:45940666-45940685 None:intergenic 35.0%
AAATTCAAGCAATTCTGTGC+AGG - chr2_1:45940926-45940945 None:intergenic 35.0%
TGAATGACACGGTGATAATA+TGG + chr2_1:45940963-45940982 Msa0209090:CDS 35.0%
! CTCAACCTATTCTTTTTCCA+GGG + chr2_1:45941183-45941202 Msa0209090:intron 35.0%
!! TTGACATGATTGAGTTTTGG+TGG + chr2_1:45941206-45941225 Msa0209090:intron 35.0%
!! TGACATGATTGAGTTTTGGT+GGG + chr2_1:45941207-45941226 Msa0209090:intron 35.0%
TAGATAAAACAGAGGGAAGT+AGG + chr2_1:45941252-45941271 Msa0209090:intron 35.0%
GTCACACATTCGATAAGATT+GGG - chr2_1:45941334-45941353 None:intergenic 35.0%
GATGCAACTAGTTATAAGGA+AGG + chr2_1:45941386-45941405 Msa0209090:intron 35.0%
GAGGATACAATCTGCAAAAA+TGG + chr2_1:45941446-45941465 Msa0209090:intron 35.0%
CAAAAATGGAAATGGAGATG+AGG + chr2_1:45941460-45941479 Msa0209090:intron 35.0%
GAAATGAGAGCTGAAACTAA+CGG - chr2_1:45941526-45941545 None:intergenic 35.0%
AGAAGTCTAACAGAAAGGAA+GGG - chr2_1:45941552-45941571 None:intergenic 35.0%
AAGAAGTCTAACAGAAAGGA+AGG - chr2_1:45941553-45941572 None:intergenic 35.0%
TGTTAGACTTCTTATGATGG+CGG + chr2_1:45941560-45941579 Msa0209090:intron 35.0%
GCTAGAATCGACACTAAAAA+TGG - chr2_1:45941987-45942006 None:intergenic 35.0%
TGAAGTTCAACAACTTAAGG+TGG - chr2_1:45942051-45942070 None:intergenic 35.0%
!!! TCAGAATTTTTTTTGGCAGC+TGG + chr2_1:45942086-45942105 Msa0209090:intron 35.0%
! AATTTATACTCTGGTAGTGC+AGG - chr2_1:45942205-45942224 None:intergenic 35.0%
! GTGGCTTGTGTATTGAAATT+TGG + chr2_1:45942232-45942251 Msa0209090:intron 35.0%
TTGCTATCGTCTATATTCTC+TGG - chr2_1:45942283-45942302 None:intergenic 35.0%
CATAAAGTTAGGGAAAACTG+CGG - chr2_1:45942329-45942348 None:intergenic 35.0%
AGCAAAGCAGTTTAGTGTAA+TGG + chr2_1:45942562-45942581 Msa0209090:intron 35.0%
AGGATAGTGAAAATGACAAC+AGG - chr2_1:45942785-45942804 None:intergenic 35.0%
!! TGCCACAGTTTTTCAATTCA+TGG + chr2_1:45943023-45943042 Msa0209090:intron 35.0%
!! TGCTACTTCTGTTAACTTGT+AGG + chr2_1:45943135-45943154 Msa0209090:intron 35.0%
ACCACAGATGTACAATTCAT+TGG - chr2_1:45943224-45943243 None:intergenic 35.0%
CTCCTAATCCAAATTTAACG+AGG + chr2_1:45943574-45943593 Msa0209090:intron 35.0%
TTCTTATATATAGGACCGGA+GGG - chr2_1:45943682-45943701 None:intergenic 35.0%
TTTCTTATATATAGGACCGG+AGG - chr2_1:45943683-45943702 None:intergenic 35.0%
ACACTAATGAGTGAGTGTAT+TGG + chr2_1:45943881-45943900 Msa0209090:intron 35.0%
TTCTTATATTAAGGACCGGA+GGG + chr2_1:45943926-45943945 Msa0209090:intron 35.0%
! CTTTTATCCGAACACACTTA+AGG + chr2_1:45944010-45944029 Msa0209090:intron 35.0%
CATAAGTCACTACTAGTGTA+TGG + chr2_1:45944111-45944130 Msa0209090:intron 35.0%
TGTCACAAAAATGAGTCAAC+AGG + chr2_1:45944154-45944173 Msa0209090:intron 35.0%
CAAAGATTCATCAAAGCTCT+TGG - chr2_1:45944471-45944490 None:intergenic 35.0%
AATGGAAAACTCTTGGCATT+TGG - chr2_1:45944552-45944571 None:intergenic 35.0%
AGGTTCCATAAGACAATTAG+GGG - chr2_1:45944652-45944671 None:intergenic 35.0%
GTAGGTTCCATAAGACAATT+AGG - chr2_1:45944654-45944673 None:intergenic 35.0%
GCAGGGAAGAATAAAAAGAA+AGG - chr2_1:45944924-45944943 None:intergenic 35.0%
CAGCTATTATTTCCGTTGTT+AGG + chr2_1:45944999-45945018 Msa0209090:intron 35.0%
! TTTTTACCTGTAAAGAGGGA+GGG - chr2_1:45945137-45945156 None:intergenic 35.0%
! ATTTTTACCTGTAAAGAGGG+AGG - chr2_1:45945138-45945157 None:intergenic 35.0%
AACTATTGCCATAGGAGATT+GGG - chr2_1:45945276-45945295 None:intergenic 35.0%
TAACTATTGCCATAGGAGAT+TGG - chr2_1:45945277-45945296 None:intergenic 35.0%
CCAAAAAATCACACCATGAA+AGG - chr2_1:45945346-45945365 None:intergenic 35.0%
!!! CCTTTCATGGTGTGATTTTT+TGG + chr2_1:45945343-45945362 Msa0209090:CDS 35.0%
!!! TGTGATTTTTTGGAGAGAGT+TGG + chr2_1:45945353-45945372 Msa0209090:CDS 35.0%
CATGAGAATGTTGAAAGGAT+CGG - chr2_1:45945463-45945482 None:intergenic 35.0%
CAACACATGAGAATGTTGAA+AGG - chr2_1:45945468-45945487 None:intergenic 35.0%
TCATGTAAAATACAGAGGCA+AGG + chr2_1:45945571-45945590 Msa0209090:intron 35.0%
CTTATTGTTGTCTGACTTTG+TGG + chr2_1:45945788-45945807 Msa0209090:intron 35.0%
ATCATCCATCCAAGATTAGT+GGG - chr2_1:45945920-45945939 None:intergenic 35.0%
ACTAATCTTGGATGGATGAT+GGG + chr2_1:45945920-45945939 Msa0209090:CDS 35.0%
AATGATGCATATACTAGCCA+TGG - chr2_1:45945947-45945966 None:intergenic 35.0%
!! GCTTCAATGGCTTTGTATAA+TGG + chr2_1:45945977-45945996 Msa0209090:CDS 35.0%
GGGAACCATCAAAATTATGA+TGG - chr2_1:45946056-45946075 None:intergenic 35.0%
!! GAACTATATTCGAGTTGGTT+CGG - chr2_1:45946116-45946135 None:intergenic 35.0%
GACAATTAATTCGTCGAACT+TGG + chr2_1:45946148-45946167 Msa0209090:intron 35.0%
! TATATGTAGTTCGACTCGAT+TGG + chr2_1:45946240-45946259 Msa0209090:intron 35.0%
!! ATGCACTAATTTGTTGCTCT+AGG + chr2_1:45946430-45946449 Msa0209090:intron 35.0%
!! TGCACTAATTTGTTGCTCTA+GGG + chr2_1:45946431-45946450 Msa0209090:intron 35.0%
CATCTTAATCGTGGAAACTT+AGG - chr2_1:45947171-45947190 None:intergenic 35.0%
CTAAGTTTCCACGATTAAGA+TGG + chr2_1:45947169-45947188 Msa0209090:intron 35.0%
! GTTACTTTAGCATCCTAAAC+AGG - chr2_1:45947269-45947288 None:intergenic 35.0%
GATGCTAAAGTAACAATGCT+TGG + chr2_1:45947275-45947294 Msa0209090:CDS 35.0%
ATGATTATGCAGCATCTGAT+TGG + chr2_1:45947432-45947451 Msa0209090:intron 35.0%
CCACCACAATATTCAATGAT+AGG - chr2_1:45947551-45947570 None:intergenic 35.0%
CCTATCATTGAATATTGTGG+TGG + chr2_1:45947548-45947567 Msa0209090:CDS 35.0%
ATGCAATCAAGAACTGCATA+TGG - chr2_1:45947756-45947775 None:intergenic 35.0%
GCAGATGATACAATGAATCT+TGG + chr2_1:45948295-45948314 Msa0209090:CDS 35.0%
GATGATACAATGAATCTTGG+AGG + chr2_1:45948298-45948317 Msa0209090:CDS 35.0%
AATGAATCTTGGAGGAATCA+AGG + chr2_1:45948306-45948325 Msa0209090:CDS 35.0%
AACAAAGTTAAGGACAACAG+GGG - chr2_1:45948405-45948424 None:intergenic 35.0%
CAACAAAGTTAAGGACAACA+GGG - chr2_1:45948406-45948425 None:intergenic 35.0%
ACAACAAAGTTAAGGACAAC+AGG - chr2_1:45948407-45948426 None:intergenic 35.0%
TGGTAGAACAATGTAAGGAT+AGG + chr2_1:45948454-45948473 Msa0209090:intron 35.0%
! ATATGCCAATGAAGTGTTCA+TGG - chr2_1:45948481-45948500 None:intergenic 35.0%
! GTTTGTATTGATGCATCCTA+TGG - chr2_1:45948533-45948552 None:intergenic 35.0%
CAATACAAACTGTTCGTCTT+TGG + chr2_1:45948543-45948562 Msa0209090:intron 35.0%
GAAATTGAACGCATATGCAA+CGG + chr2_1:45948835-45948854 Msa0209090:CDS 35.0%
CGGAGTAGATAGTAATATTG+TGG + chr2_1:45948855-45948874 Msa0209090:CDS 35.0%
AAATACATGCTCGTTTGTGT+AGG + chr2_1:45949095-45949114 Msa0209090:intron 35.0%
CTCAAACAAGGTTATGAGAA+GGG + chr2_1:45949158-45949177 Msa0209090:CDS 35.0%
GTATCCGATATTGAATCCCT+TGG + chr2_1:45939520-45939539 Msa0209090:CDS 40.0%
GAAACGAAAACGGAAGTTCA+GGG - chr2_1:45939657-45939676 None:intergenic 40.0%
TGAAACGAAAACGGAAGTTC+AGG - chr2_1:45939658-45939677 None:intergenic 40.0%
TCGGTGACTATAATTGACGA+TGG + chr2_1:45940006-45940025 Msa0209090:intron 40.0%
GACGATGGTCTAATTGGTAA+TGG + chr2_1:45940021-45940040 Msa0209090:intron 40.0%
AAATCTCGTCGTTGATGTGA+GGG + chr2_1:45940073-45940092 Msa0209090:intron 40.0%
AAACAGTGACCTTTCAGTCA+CGG - chr2_1:45940296-45940315 None:intergenic 40.0%
! AAGGTCACTGTTTCAAGTCT+TGG + chr2_1:45940303-45940322 Msa0209090:intron 40.0%
AAGAGGGGTAAAGAGTTTCT+GGG + chr2_1:45940601-45940620 Msa0209090:CDS 40.0%
! GTTTCTGGGTTCACTGTATA+AGG + chr2_1:45940615-45940634 Msa0209090:CDS 40.0%
! ATTTTCAGTCTCAAACCCTG+AGG + chr2_1:45940669-45940688 Msa0209090:CDS 40.0%
ATTATCTTGGATGGACCTCA+GGG - chr2_1:45940687-45940706 None:intergenic 40.0%
GGTTTATTGGAAAACTGTGC+TGG + chr2_1:45940784-45940803 Msa0209090:intron 40.0%
TTGTCACGTAAGATGCATTC+AGG - chr2_1:45940839-45940858 None:intergenic 40.0%
! CAAGTGTCATCCTTTGAAGA+GGG - chr2_1:45941012-45941031 None:intergenic 40.0%
! TCAAGTGTCATCCTTTGAAG+AGG - chr2_1:45941013-45941032 None:intergenic 40.0%
TCTTCAAAGGATGACACTTG+AGG + chr2_1:45941012-45941031 Msa0209090:CDS 40.0%
AGTTTCTCTCTGCTATAGCT+AGG + chr2_1:45941146-45941165 Msa0209090:intron 40.0%
! GAAAAAGAATAGGTTGAGGC+AGG - chr2_1:45941181-45941200 None:intergenic 40.0%
CCTGGAAAAAGAATAGGTTG+AGG - chr2_1:45941185-45941204 None:intergenic 40.0%
! CCTCAACCTATTCTTTTTCC+AGG + chr2_1:45941182-45941201 Msa0209090:intron 40.0%
GTCAACCCTGGAAAAAGAAT+AGG - chr2_1:45941191-45941210 None:intergenic 40.0%
AAACTCAATCATGTCAACCC+TGG - chr2_1:45941203-45941222 None:intergenic 40.0%
! GGGTTGACATGATTGAGTTT+TGG + chr2_1:45941203-45941222 Msa0209090:intron 40.0%
TAAAACAGAGGGAAGTAGGA+TGG + chr2_1:45941256-45941275 Msa0209090:intron 40.0%
GGTCACACATTCGATAAGAT+TGG - chr2_1:45941335-45941354 None:intergenic 40.0%
!! ACTTCTTATGATGGCGGTTA+TGG + chr2_1:45941566-45941585 Msa0209090:intron 40.0%
!! CTTCTTATGATGGCGGTTAT+GGG + chr2_1:45941567-45941586 Msa0209090:intron 40.0%
AGACCAAGCTCTCTAATTCT+TGG + chr2_1:45941720-45941739 Msa0209090:intron 40.0%
CATCCAAGAATTAGAGAGCT+TGG - chr2_1:45941726-45941745 None:intergenic 40.0%
CAAGCTCTCTAATTCTTGGA+TGG + chr2_1:45941724-45941743 Msa0209090:intron 40.0%
TCTCTAATTCTTGGATGGAG+AGG + chr2_1:45941729-45941748 Msa0209090:intron 40.0%
TCGAAGAAATTCGAGAGTCT+TGG - chr2_1:45941755-45941774 None:intergenic 40.0%
! GCAATGGAGAATGAAAGTGT+TGG - chr2_1:45941924-45941943 None:intergenic 40.0%
!!! TTTTTTTTGGCAGCTGGCAA+CGG + chr2_1:45942092-45942111 Msa0209090:intron 40.0%
TTTATGAGATTTGGCTGGCA+AGG + chr2_1:45942373-45942392 Msa0209090:intron 40.0%
AAAATACCGGAGCAGCATTT+GGG + chr2_1:45942733-45942752 Msa0209090:intron 40.0%
GGAGTGAGACAAAGTGTAAA+AGG - chr2_1:45942764-45942783 None:intergenic 40.0%
!! GTCATTTTCACTATCCTCAC+TGG + chr2_1:45942788-45942807 Msa0209090:intron 40.0%
AAAATGTTGGAAGAGCCAGT+GGG - chr2_1:45942901-45942920 None:intergenic 40.0%
AAAAATGTTGGAAGAGCCAG+TGG - chr2_1:45942902-45942921 None:intergenic 40.0%
! TGGCTCTTCCAACATTTTTG+AGG + chr2_1:45942903-45942922 Msa0209090:intron 40.0%
!!! TCCAACATTTTTGAGGTCCA+CGG + chr2_1:45942910-45942929 Msa0209090:intron 40.0%
GCCAATGAATTGTACATCTG+TGG + chr2_1:45943220-45943239 Msa0209090:CDS 40.0%
AGTATCTTAGGAGATCTCTG+CGG - chr2_1:45943645-45943664 None:intergenic 40.0%
CTTCTTATATTAAGGACCGG+AGG + chr2_1:45943925-45943944 Msa0209090:intron 40.0%
! ATTTTGCATCTTACTCCCTC+CGG - chr2_1:45943944-45943963 None:intergenic 40.0%
!!! GTATAATGCAGTGCCACTTT+TGG + chr2_1:45944041-45944060 Msa0209090:intron 40.0%
GTCAGTTATTACTTACGCCA+GGG - chr2_1:45944092-45944111 None:intergenic 40.0%
TGTCAGTTATTACTTACGCC+AGG - chr2_1:45944093-45944112 None:intergenic 40.0%
TAGGTGCTAGCATAACATTG+AGG - chr2_1:45944253-45944272 None:intergenic 40.0%
CACAAGATGAATCATGCTAG+TGG + chr2_1:45944375-45944394 Msa0209090:intron 40.0%
ATCAAAGCTCTTGGGACAAA+GGG - chr2_1:45944462-45944481 None:intergenic 40.0%
ACACGATTGACACCTAACAA+CGG - chr2_1:45945014-45945033 None:intergenic 40.0%
TCCACAACTCTACTGCATTT+GGG - chr2_1:45945251-45945270 None:intergenic 40.0%
ATCCACAACTCTACTGCATT+TGG - chr2_1:45945252-45945271 None:intergenic 40.0%
GTTGGGATAACTATTGCCAT+AGG - chr2_1:45945284-45945303 None:intergenic 40.0%
GCAATAGTTATCCCAACTAG+AGG + chr2_1:45945287-45945306 Msa0209090:CDS 40.0%
!!! CTCTTTTCTTCTGGAACAAC+AGG + chr2_1:45945638-45945657 Msa0209090:CDS 40.0%
AGTGATTGAAGTCTCAAGAC+TGG - chr2_1:45945749-45945768 None:intergenic 40.0%
GTTGTCTGACTTTGTGGTAT+AGG + chr2_1:45945794-45945813 Msa0209090:intron 40.0%
GTGATCCAAAAGCAATTCCA+TGG + chr2_1:45945816-45945835 Msa0209090:CDS 40.0%
! TTGGTCCATGGAATTGCTTT+TGG - chr2_1:45945824-45945843 None:intergenic 40.0%
AGAGGAGTAATATTGGTCCA+TGG - chr2_1:45945836-45945855 None:intergenic 40.0%
! GTAAAGGTGATGTAGTTTGC+TGG + chr2_1:45945894-45945913 Msa0209090:CDS 40.0%
CATCATCCATCCAAGATTAG+TGG - chr2_1:45945921-45945940 None:intergenic 40.0%
CACTAATCTTGGATGGATGA+TGG + chr2_1:45945919-45945938 Msa0209090:CDS 40.0%
CTAATCTTGGATGGATGATG+GGG + chr2_1:45945921-45945940 Msa0209090:CDS 40.0%
!! TTGTATAATGGATCCCCACT+TGG + chr2_1:45945989-45946008 Msa0209090:CDS 40.0%
CTGTACAAATTTGGCAAAGC+CGG - chr2_1:45946017-45946036 None:intergenic 40.0%
TTCTTTCCTATCAATAGGGC+TGG + chr2_1:45946083-45946102 Msa0209090:intron 40.0%
CAACTCAAGTTCAGCTCATT+TGG - chr2_1:45946182-45946201 None:intergenic 40.0%
TTAAAATAGTCCCACATCGG+TGG + chr2_1:45946647-45946666 Msa0209090:intron 40.0%
TAAAATAGTCCCACATCGGT+GGG + chr2_1:45946648-45946667 Msa0209090:intron 40.0%
!! TGTTTTAAACCCACCGATGT+GGG - chr2_1:45946660-45946679 None:intergenic 40.0%
!!! TTGTTTTAAACCCACCGATG+TGG - chr2_1:45946661-45946680 None:intergenic 40.0%
! CCTTTTGTTAAGCTCGAGTT+CGG - chr2_1:45946936-45946955 None:intergenic 40.0%
CGACTCGATAAGAATTGGTT+CGG - chr2_1:45946988-45947007 None:intergenic 40.0%
!!! AGTGCTATTTTGCCCTGTTT+AGG + chr2_1:45947253-45947272 Msa0209090:intron 40.0%
! GTGTGATTCCAAGTCTTGTA+CGG + chr2_1:45947297-45947316 Msa0209090:CDS 40.0%
ATTCTACATCCGGCTATGAT+TGG + chr2_1:45947336-45947355 Msa0209090:CDS 40.0%
GTTGGTTAAATAGTGCTCAC+CGG - chr2_1:45947370-45947389 None:intergenic 40.0%
TGCTAGTGTATTAGGGTAGT+TGG - chr2_1:45947388-45947407 None:intergenic 40.0%
GTACGTCTGCTAGTGTATTA+GGG - chr2_1:45947395-45947414 None:intergenic 40.0%
CGAACGTAGATGAATACCTT+TGG + chr2_1:45947501-45947520 Msa0209090:CDS 40.0%
AGATGAATACCTTTGGCTGA+TGG + chr2_1:45947508-45947527 Msa0209090:CDS 40.0%
GATGAATACCTTTGGCTGAT+GGG + chr2_1:45947509-45947528 Msa0209090:CDS 40.0%
TATTGTGGTGGTACAGAGAT+TGG + chr2_1:45947560-45947579 Msa0209090:CDS 40.0%
ATTGTGGTGGTACAGAGATT+GGG + chr2_1:45947561-45947580 Msa0209090:CDS 40.0%
! GGAACATTTTGTGGCTGTAA+TGG - chr2_1:45948026-45948045 None:intergenic 40.0%
TTACAGCCACAAAATGTTCC+AGG + chr2_1:45948026-45948045 Msa0209090:intron 40.0%
! CCTATTCCTGGAACATTTTG+TGG - chr2_1:45948035-45948054 None:intergenic 40.0%
CCACAAAATGTTCCAGGAAT+AGG + chr2_1:45948032-45948051 Msa0209090:CDS 40.0%
CTGCTGAATGCTGATCATTA+TGG + chr2_1:45948098-45948117 Msa0209090:CDS 40.0%
AGTTGAGTTTCTCTCTAGTC+AGG + chr2_1:45948207-45948226 Msa0209090:intron 40.0%
! AGTCAGGTTTTACGAAGACA+TGG + chr2_1:45948223-45948242 Msa0209090:intron 40.0%
GTATTTGAGCGTACTTCTAG+AGG + chr2_1:45948250-45948269 Msa0209090:CDS 40.0%
AGAGGATACTATCATGCACA+TGG + chr2_1:45948268-45948287 Msa0209090:CDS 40.0%
TAGGTAATGCCTGGAGAATT+TGG + chr2_1:45948371-45948390 Msa0209090:intron 40.0%
AATGCCTGGAGAATTTGGTA+TGG + chr2_1:45948376-45948395 Msa0209090:intron 40.0%
TAGGACCATGAACACTTCAT+TGG + chr2_1:45948473-45948492 Msa0209090:intron 40.0%
! GTTGTTTCGATAGGTGAGTT+CGG + chr2_1:45948810-45948829 Msa0209090:intron 40.0%
! CCTTCTCATAACCTTGTTTG+AGG - chr2_1:45949160-45949179 None:intergenic 40.0%
CCTCAAACAAGGTTATGAGA+AGG + chr2_1:45949157-45949176 Msa0209090:CDS 40.0%
! AGGTTATGAGAAGGGTTTTG+CGG + chr2_1:45949166-45949185 Msa0209090:CDS 40.0%
CTATTAATTCCGTGAGACGC+AGG - chr2_1:45939576-45939595 None:intergenic 45.0%
! TGTTAAGAGAGCATACGGGT+CGG - chr2_1:45939740-45939759 None:intergenic 45.0%
CTACATGTCATTGTCGTGTC+CGG - chr2_1:45939818-45939837 None:intergenic 45.0%
GTTTGGCCAATGCTGCATAA+GGG + chr2_1:45940043-45940062 Msa0209090:intron 45.0%
AACTCACCCTTATGCAGCAT+TGG - chr2_1:45940052-45940071 None:intergenic 45.0%
CAAATCTCGTCGTTGATGTG+AGG + chr2_1:45940072-45940091 Msa0209090:intron 45.0%
GGGAACTCGAAAAAGCTACA+AGG - chr2_1:45940135-45940154 None:intergenic 45.0%
TCCTGGATACACCAAATGGT+GGG - chr2_1:45940261-45940280 None:intergenic 45.0%
CAAGTCCTGGATACACCAAA+TGG - chr2_1:45940265-45940284 None:intergenic 45.0%
GAAGAGGGGTAAAGAGTTTC+TGG + chr2_1:45940600-45940619 Msa0209090:CDS 45.0%
GATTATCTTGGATGGACCTC+AGG - chr2_1:45940688-45940707 None:intergenic 45.0%
TGCATCTTACGTGACAATCC+TGG + chr2_1:45940842-45940861 Msa0209090:CDS 45.0%
TGGCGTGATGAACTACAAGA+TGG + chr2_1:45940983-45941002 Msa0209090:CDS 45.0%
AAGATGGTCTCCCTCTTCAA+AGG + chr2_1:45940999-45941018 Msa0209090:CDS 45.0%
ACTTGAGGAATTGCGTCAAG+AGG + chr2_1:45941027-45941046 Msa0209090:CDS 45.0%
AGGAATTGCGTCAAGAGGTT+TGG + chr2_1:45941032-45941051 Msa0209090:CDS 45.0%
TAATCCTGCATAACCTCCCT+CGG - chr2_1:45941293-45941312 None:intergenic 45.0%
GAGATGAGGAAACGAGAGTT+GGG + chr2_1:45941474-45941493 Msa0209090:intron 45.0%
CCTGTTAGAATGGTGAGCAA+TGG - chr2_1:45941940-45941959 None:intergenic 45.0%
CCATTGCTCACCATTCTAAC+AGG + chr2_1:45941937-45941956 Msa0209090:intron 45.0%
AAGCAGAGCTCCTGTTAGAA+TGG - chr2_1:45941950-45941969 None:intergenic 45.0%
CAACAACTTAAGGTGGTCCT+TGG - chr2_1:45942044-45942063 None:intergenic 45.0%
GAAACTTGCACTCTGTCCTA+TGG - chr2_1:45942408-45942427 None:intergenic 45.0%
ATCCCACATCTAGATGGTAC+AGG + chr2_1:45942530-45942549 Msa0209090:intron 45.0%
GTCCTGTACCATCTAGATGT+GGG - chr2_1:45942535-45942554 None:intergenic 45.0%
TGTCCTGTACCATCTAGATG+TGG - chr2_1:45942536-45942555 None:intergenic 45.0%
!! GTTTTTGACTGGGACATGCT+AGG + chr2_1:45942693-45942712 Msa0209090:intron 45.0%
CAAAATACCGGAGCAGCATT+TGG + chr2_1:45942732-45942751 Msa0209090:intron 45.0%
TGCGTATGCTCTTGAATCAC+TGG + chr2_1:45943163-45943182 Msa0209090:CDS 45.0%
GCGTATGCTCTTGAATCACT+GGG + chr2_1:45943164-45943183 Msa0209090:CDS 45.0%
TACCTAGCTATCGTTCTTGC+AGG + chr2_1:45943248-45943267 Msa0209090:CDS 45.0%
AACCTGCAAGAACGATAGCT+AGG - chr2_1:45943253-45943272 None:intergenic 45.0%
TGGCGCAAAACTATCAGCTA+TGG - chr2_1:45943288-45943307 None:intergenic 45.0%
! AGCCTGGTTGATATTTCACG+TGG - chr2_1:45943308-45943327 None:intergenic 45.0%
!!! TGCCACTTTTGGACTAGAGA+TGG + chr2_1:45944052-45944071 Msa0209090:intron 45.0%
!!! GCCACTTTTGGACTAGAGAT+GGG + chr2_1:45944053-45944072 Msa0209090:intron 45.0%
ACCCATCTCTAGTCCAAAAG+TGG - chr2_1:45944057-45944076 None:intergenic 45.0%
CATCAAAGCTCTTGGGACAA+AGG - chr2_1:45944463-45944482 None:intergenic 45.0%
AGATCCTGACAAGTAGCAGT+GGG - chr2_1:45945094-45945113 None:intergenic 45.0%
TGTCAGGATCTCATACTTCG+TGG + chr2_1:45945103-45945122 Msa0209090:intron 45.0%
ATAAAGCCCTCCCTCTTTAC+AGG + chr2_1:45945128-45945147 Msa0209090:CDS 45.0%
CAGGAGACAACTCAAGTACA+GGG - chr2_1:45945185-45945204 None:intergenic 45.0%
ACAGGAGACAACTCAAGTAC+AGG - chr2_1:45945186-45945205 None:intergenic 45.0%
TCCCAAATGCAGTAGAGTTG+TGG + chr2_1:45945247-45945266 Msa0209090:intron 45.0%
TTCAGCATGCAACTGCGTAA+CGG + chr2_1:45945317-45945336 Msa0209090:CDS 45.0%
GAGAATGTTGAAAGGATCGG+AGG - chr2_1:45945460-45945479 None:intergenic 45.0%
CGGCTTTGCCAAATTTGTAC+AGG + chr2_1:45946015-45946034 Msa0209090:CDS 45.0%
TCATTGCCAGCCCTATTGAT+AGG - chr2_1:45946092-45946111 None:intergenic 45.0%
! GACTCGATTGGTTCATGAGT+TGG + chr2_1:45946252-45946271 Msa0209090:intron 45.0%
! AAAGACGGAAGTGTGTGCAA+TGG + chr2_1:45946704-45946723 Msa0209090:intron 45.0%
! CTCAACAGTGAAGCGCTATT+TGG + chr2_1:45946745-45946764 Msa0209090:intron 45.0%
CCGAACTCGAGCTTAACAAA+AGG + chr2_1:45946933-45946952 Msa0209090:intron 45.0%
! CGACTCGACTCGATAAGAAT+TGG - chr2_1:45946993-45947012 None:intergenic 45.0%
! CTAATGTTGATAGGTAGGGC+TGG - chr2_1:45947050-45947069 None:intergenic 45.0%
TTCCACGATTAAGATGGGCA+CGG + chr2_1:45947175-45947194 Msa0209090:intron 45.0%
GATAGCAGACCAATCATAGC+CGG - chr2_1:45947348-45947367 None:intergenic 45.0%
!! GCTATGATTGGTCTGCTATC+CGG + chr2_1:45947348-45947367 Msa0209090:CDS 45.0%
GGTACGTCTGCTAGTGTATT+AGG - chr2_1:45947396-45947415 None:intergenic 45.0%
CAGTGGATGCAAAGCAACTA+CGG - chr2_1:45947472-45947491 None:intergenic 45.0%
TTGTGGTGGTACAGAGATTG+GGG + chr2_1:45947562-45947581 Msa0209090:CDS 45.0%
ATTACTGCAGGCTCAGTCAT+TGG + chr2_1:45947604-45947623 Msa0209090:CDS 45.0%
!!! ATTGGCTGCTTTTAGCACAC+CGG + chr2_1:45947622-45947641 Msa0209090:CDS 45.0%
AACAAATTGCAGCACATCGC+CGG - chr2_1:45947644-45947663 None:intergenic 45.0%
AGAGCTAACTCACCTATTCC+TGG - chr2_1:45948047-45948066 None:intergenic 45.0%
! GGAATAGGTGAGTTAGCTCT+TGG + chr2_1:45948047-45948066 Msa0209090:CDS 45.0%
CTCTTGGATCCCTTATGCTT+GGG + chr2_1:45948063-45948082 Msa0209090:CDS 45.0%
TCTTGGATCCCTTATGCTTG+GGG + chr2_1:45948064-45948083 Msa0209090:CDS 45.0%
GTTTGATGCCCCAAGCATAA+GGG - chr2_1:45948075-45948094 None:intergenic 45.0%
TGTTTGATGCCCCAAGCATA+AGG - chr2_1:45948076-45948095 None:intergenic 45.0%
ATTTCAAGGGAATGCCTCTC+TGG + chr2_1:45948126-45948145 Msa0209090:CDS 45.0%
!! AATGCCTCTCTGGAATGGAA+AGG + chr2_1:45948136-45948155 Msa0209090:CDS 45.0%
TCTACCTTTCCATTCCAGAG+AGG - chr2_1:45948143-45948162 None:intergenic 45.0%
GAAGCCATACCAAATTCTCC+AGG - chr2_1:45948383-45948402 None:intergenic 45.0%
ATTGTGGAAACAGCTGCCAT+CGG + chr2_1:45948871-45948890 Msa0209090:CDS 45.0%
GTGGTCTCTCGCAATTCCAA+GGG - chr2_1:45939539-45939558 None:intergenic 50.0%
TTAATTCCGTGAGACGCAGG+TGG - chr2_1:45939573-45939592 None:intergenic 50.0%
AAAACGGAAGTTCAGGGCTG+AGG - chr2_1:45939651-45939670 None:intergenic 50.0%
! GTTAAGAGAGCATACGGGTC+GGG - chr2_1:45939739-45939758 None:intergenic 50.0%
GGTTTGGCCAATGCTGCATA+AGG + chr2_1:45940042-45940061 Msa0209090:intron 50.0%
!! TCCCACCATTTGGTGTATCC+AGG + chr2_1:45940257-45940276 Msa0209090:intron 50.0%
GTCCTGGATACACCAAATGG+TGG - chr2_1:45940262-45940281 None:intergenic 50.0%
TTGGTCGGTTGCTTGAGAAG+AGG + chr2_1:45940584-45940603 Msa0209090:CDS 50.0%
TGGTCGGTTGCTTGAGAAGA+GGG + chr2_1:45940585-45940604 Msa0209090:CDS 50.0%
CTTACGTGACAATCCTGGTG+AGG + chr2_1:45940847-45940866 Msa0209090:CDS 50.0%
GGTTCATCCTCATACCCAAG+TGG + chr2_1:45940872-45940891 Msa0209090:CDS 50.0%
CCATTGACCACTTGGGTATG+AGG - chr2_1:45940882-45940901 None:intergenic 50.0%
CCTCATACCCAAGTGGTCAA+TGG + chr2_1:45940879-45940898 Msa0209090:CDS 50.0%
CAGGAAGCCATTGACCACTT+GGG - chr2_1:45940889-45940908 None:intergenic 50.0%
GCAGGATTAATCGATGCTCC+AGG - chr2_1:45940908-45940927 None:intergenic 50.0%
AACAGAGGGAAGTAGGATGG+AGG + chr2_1:45941259-45941278 Msa0209090:intron 50.0%
ACAGAGGGAAGTAGGATGGA+GGG + chr2_1:45941260-45941279 Msa0209090:intron 50.0%
GAAGTAGGATGGAGGGGAAT+GGG + chr2_1:45941267-45941286 Msa0209090:intron 50.0%
GGAGATGAGGAAACGAGAGT+TGG + chr2_1:45941473-45941492 Msa0209090:intron 50.0%
ATGAGGAAACGAGAGTTGGG+AGG + chr2_1:45941477-45941496 Msa0209090:intron 50.0%
TGAGGAAACGAGAGTTGGGA+GGG + chr2_1:45941478-45941497 Msa0209090:intron 50.0%
GGCAAGGTATGCGTATCCAT+AGG + chr2_1:45942389-45942408 Msa0209090:intron 50.0%
GTGGGATCGCTTCACTAGTA+AGG - chr2_1:45942517-45942536 None:intergenic 50.0%
GAAGCGATCCCACATCTAGA+TGG + chr2_1:45942524-45942543 Msa0209090:intron 50.0%
TGCTATGTTGGCCACTACAG+CGG - chr2_1:45942597-45942616 None:intergenic 50.0%
GGCCAACATAGCAGTTGTCA+CGG + chr2_1:45942604-45942623 Msa0209090:intron 50.0%
TGCCGTGACAACTGCTATGT+TGG - chr2_1:45942609-45942628 None:intergenic 50.0%
CAGAAAAGTTGCCATCCCAC+TGG + chr2_1:45942883-45942902 Msa0209090:intron 50.0%
GCCGTGGACCTCAAAAATGT+TGG - chr2_1:45942914-45942933 None:intergenic 50.0%
TGCTCTTGAATCACTGGGTC+TGG + chr2_1:45943169-45943188 Msa0209090:CDS 50.0%
GAATCACTGGGTCTGGAGAA+AGG + chr2_1:45943176-45943195 Msa0209090:CDS 50.0%
CGCCACGTGAAATATCAACC+AGG + chr2_1:45943303-45943322 Msa0209090:CDS 50.0%
TGGGTTATACAGCATTGCCC+TGG + chr2_1:45944072-45944091 Msa0209090:intron 50.0%
CTGACAAGTAGCAGTGGGAA+AGG - chr2_1:45945089-45945108 None:intergenic 50.0%
! CTTTCCCACTGCTACTTGTC+AGG + chr2_1:45945087-45945106 Msa0209090:intron 50.0%
GAGATCCTGACAAGTAGCAG+TGG - chr2_1:45945095-45945114 None:intergenic 50.0%
CTCTACTGCATTTGGGAAGC+AGG - chr2_1:45945244-45945263 None:intergenic 50.0%
TGTGGATGCCCAATCTCCTA+TGG + chr2_1:45945265-45945284 Msa0209090:CDS 50.0%
GTTATCCCAACTAGAGGCTC+CGG + chr2_1:45945293-45945312 Msa0209090:CDS 50.0%
TGAATCCGGAGCCTCTAGTT+GGG - chr2_1:45945301-45945320 None:intergenic 50.0%
ACGCAGTTGCATGCTGAATC+CGG - chr2_1:45945315-45945334 None:intergenic 50.0%
TGCGTAACGGTGACCTTTCA+TGG + chr2_1:45945330-45945349 Msa0209090:CDS 50.0%
! GCATCTGCAGCAGCTTTTAG+AGG - chr2_1:45945854-45945873 None:intergenic 50.0%
TAAAAGCTGCTGCAGATGCG+TGG + chr2_1:45945855-45945874 Msa0209090:CDS 50.0%
! TGCCACTTGGACGTTCGTAA+AGG + chr2_1:45945878-45945897 Msa0209090:CDS 50.0%
CACCTTTACGAACGTCCAAG+TGG - chr2_1:45945883-45945902 None:intergenic 50.0%
! GTTTGCTGGCCCACTAATCT+TGG + chr2_1:45945908-45945927 Msa0209090:CDS 50.0%
!! ACAGTTCGGATCGACTCGTT+AGG - chr2_1:45946895-45946914 None:intergenic 50.0%
! CCTTCTTAGTGCTGGATGTG+AGG - chr2_1:45947123-45947142 None:intergenic 50.0%
CCTCACATCCAGCACTAAGA+AGG + chr2_1:45947120-45947139 Msa0209090:intron 50.0%
! ATCCAGCACTAAGAAGGTGC+TGG + chr2_1:45947126-45947145 Msa0209090:intron 50.0%
TCCACGATTAAGATGGGCAC+GGG + chr2_1:45947176-45947195 Msa0209090:intron 50.0%
! TTCCAAGTCTTGTACGGAGC+TGG + chr2_1:45947303-45947322 Msa0209090:CDS 50.0%
! CGTAGTTGCTTTGCATCCAC+TGG + chr2_1:45947470-45947489 Msa0209090:intron 50.0%
TACGTTCGATGCTTCTCCAG+TGG - chr2_1:45947489-45947508 None:intergenic 50.0%
AAGCTCTTCCCATCAGCCAA+AGG - chr2_1:45947520-45947539 None:intergenic 50.0%
TGTGGTGGTACAGAGATTGG+GGG + chr2_1:45947563-45947582 Msa0209090:CDS 50.0%
CGTCACTGGATCATTACTGC+AGG + chr2_1:45947592-45947611 Msa0209090:CDS 50.0%
GCTCTTGGATCCCTTATGCT+TGG + chr2_1:45948062-45948081 Msa0209090:CDS 50.0%
! AAGGGAATGCCTCTCTGGAA+TGG + chr2_1:45948131-45948150 Msa0209090:CDS 50.0%
TTGTGGAAACAGCTGCCATC+GGG + chr2_1:45948872-45948891 Msa0209090:CDS 50.0%
ACAGCTACAGACAACTGCTC+AGG - chr2_1:45948919-45948938 None:intergenic 50.0%
TACCAGTGCCATCTCTTCCA+AGG + chr2_1:45949130-45949149 Msa0209090:CDS 50.0%
TCCAAGGACAGCCTCAAACA+AGG + chr2_1:45949146-45949165 Msa0209090:CDS 50.0%
! ACCTTGTTTGAGGCTGTCCT+TGG - chr2_1:45949150-45949169 None:intergenic 50.0%
! GGTTTTGCGGCAGAAACTTG+CGG + chr2_1:45949179-45949198 Msa0209090:CDS 50.0%
CGTGGTCTCTCGCAATTCCA+AGG - chr2_1:45939540-45939559 None:intergenic 55.0%
AACTCTCCACCTGCGTCTCA+CGG + chr2_1:45939564-45939583 Msa0209090:CDS 55.0%
GAACTGATGCATCTGCCACG+TGG + chr2_1:45939605-45939624 Msa0209090:CDS 55.0%
CTTGCTGATGTTGTGCCACG+TGG - chr2_1:45939623-45939642 None:intergenic 55.0%
ATACGGGTCGGGTATCCAAG+CGG - chr2_1:45939728-45939747 None:intergenic 55.0%
CTCCTGCATACGCAGAGTCT+GGG + chr2_1:45940228-45940247 Msa0209090:intron 55.0%
TTCCCAGACTCTGCGTATGC+AGG - chr2_1:45940233-45940252 None:intergenic 55.0%
TGCATACGCAGAGTCTGGGA+AGG + chr2_1:45940232-45940251 Msa0209090:intron 55.0%
GCATACGCAGAGTCTGGGAA+GGG + chr2_1:45940233-45940252 Msa0209090:intron 55.0%
CATACGCAGAGTCTGGGAAG+GGG + chr2_1:45940234-45940253 Msa0209090:intron 55.0%
TGACCTTTCAGTCACGGCAC+GGG - chr2_1:45940290-45940309 None:intergenic 55.0%
GTGACCTTTCAGTCACGGCA+CGG - chr2_1:45940291-45940310 None:intergenic 55.0%
GGTCGGTTGCTTGAGAAGAG+GGG + chr2_1:45940586-45940605 Msa0209090:CDS 55.0%
CGTGACAATCCTGGTGAGGA+CGG + chr2_1:45940851-45940870 Msa0209090:CDS 55.0%
CCAGGAAGCCATTGACCACT+TGG - chr2_1:45940890-45940909 None:intergenic 55.0%
CCAAGTGGTCAATGGCTTCC+TGG + chr2_1:45940887-45940906 Msa0209090:CDS 55.0%
CAGAGGGAAGTAGGATGGAG+GGG + chr2_1:45941261-45941280 Msa0209090:intron 55.0%
GGAAGTAGGATGGAGGGGAA+TGG + chr2_1:45941266-45941285 Msa0209090:intron 55.0%
GGAAGGAAGCGACAGTAGTC+AGG + chr2_1:45941424-45941443 Msa0209090:intron 55.0%
AGGAAGCGACAGTAGTCAGG+AGG + chr2_1:45941427-45941446 Msa0209090:intron 55.0%
GGGAGGGAAGTGAGAGTAGT+CGG + chr2_1:45941494-45941513 Msa0209090:intron 55.0%
GGAGGGAAGTGAGAGTAGTC+GGG + chr2_1:45941495-45941514 Msa0209090:intron 55.0%
GGAAGTGAGAGTAGTCGGGT+GGG + chr2_1:45941499-45941518 Msa0209090:intron 55.0%
CTAACAGGAGCTCTGCTTCC+TGG + chr2_1:45941952-45941971 Msa0209090:intron 55.0%
GGCCACTACAGCGGTTTCTA+CGG - chr2_1:45942588-45942607 None:intergenic 55.0%
GAGAAGCCCAAATGCTGCTC+CGG - chr2_1:45942742-45942761 None:intergenic 55.0%
GTGACTGAGACTGACCAGTG+AGG - chr2_1:45942805-45942824 None:intergenic 55.0%
TGTTGGAAGAGCCAGTGGGA+TGG - chr2_1:45942897-45942916 None:intergenic 55.0%
ACCAGCGAGGCAAGAACTGT+CGG - chr2_1:45944619-45944638 None:intergenic 55.0%
GGGTATTTGAGAGACCAGCG+AGG - chr2_1:45944632-45944651 None:intergenic 55.0%
CTGAATCCGGAGCCTCTAGT+TGG - chr2_1:45945302-45945321 None:intergenic 55.0%
GCTGGCCCACTAATCTTGGA+TGG + chr2_1:45945912-45945931 Msa0209090:CDS 55.0%
!! TTGGATGGATGATGGGGCCA+TGG + chr2_1:45945927-45945946 Msa0209090:CDS 55.0%
AATGGATCCCCACTTGGCTC+CGG + chr2_1:45945995-45946014 Msa0209090:CDS 55.0%
CACCAGCACCTTCTTAGTGC+TGG - chr2_1:45947131-45947150 None:intergenic 55.0%
!! GGTGCTGGTGTCTGCAATGA+AGG + chr2_1:45947141-45947160 Msa0209090:intron 55.0%
ACCCGTGCCCATCTTAATCG+TGG - chr2_1:45947180-45947199 None:intergenic 55.0%
ACGATTAAGATGGGCACGGG+TGG + chr2_1:45947179-45947198 Msa0209090:intron 55.0%
CTCCAGCTCCGTACAAGACT+TGG - chr2_1:45947308-45947327 None:intergenic 55.0%
! ATTGGGGGTGGATTCGTCAC+TGG + chr2_1:45947578-45947597 Msa0209090:CDS 55.0%
ACCAGAAGGTGGTATCCCGA+TGG - chr2_1:45948890-45948909 None:intergenic 55.0%
ATCGGGATACCACCTTCTGG+TGG + chr2_1:45948889-45948908 Msa0209090:CDS 55.0%
TCGGGATACCACCTTCTGGT+GGG + chr2_1:45948890-45948909 Msa0209090:CDS 55.0%
GTCCTTGGAAGAGATGGCAC+TGG - chr2_1:45949135-45949154 None:intergenic 55.0%
GAGGCTGTCCTTGGAAGAGA+TGG - chr2_1:45949141-45949160 None:intergenic 55.0%
TACGGGTCGGGTATCCAAGC+GGG - chr2_1:45939727-45939746 None:intergenic 60.0%
GCTCCTGCATACGCAGAGTC+TGG + chr2_1:45940227-45940246 Msa0209090:intron 60.0%
TGGGAAGGGGTCCCACCATT+TGG + chr2_1:45940247-45940266 Msa0209090:intron 60.0%
GAACCCGTGCCGTGACTGAA+AGG + chr2_1:45940284-45940303 Msa0209090:intron 60.0%
GAGGATGAACCGTCCTCACC+AGG - chr2_1:45940863-45940882 None:intergenic 60.0%
GGGAAGTGAGAGTAGTCGGG+TGG + chr2_1:45941498-45941517 Msa0209090:intron 60.0%
GGCCGTAGAAACCGCTGTAG+TGG + chr2_1:45942583-45942602 Msa0209090:intron 60.0%
!! CGGATAGTGGAGTGTAGCCG+TGG - chr2_1:45942930-45942949 None:intergenic 60.0%
TCCGACAGTTCTTGCCTCGC+TGG + chr2_1:45944615-45944634 Msa0209090:intron 60.0%
!! TGCAGATGCGTGGTGCCACT+TGG + chr2_1:45945865-45945884 Msa0209090:CDS 60.0%
TGGCAAAGCCGGAGCCAAGT+GGG - chr2_1:45946006-45946025 None:intergenic 60.0%
TTGGCAAAGCCGGAGCCAAG+TGG - chr2_1:45946007-45946026 None:intergenic 60.0%
GGTGGTACAGAGATTGGGGG+TGG + chr2_1:45947566-45947585 Msa0209090:CDS 60.0%
GCCATCGGGATACCACCTTC+TGG + chr2_1:45948886-45948905 Msa0209090:CDS 60.0%
CGGGATACCACCTTCTGGTG+GGG + chr2_1:45948891-45948910 Msa0209090:CDS 60.0%
GGGATACCACCTTCTGGTGG+GGG + chr2_1:45948892-45948911 Msa0209090:CDS 60.0%
GCAGGTGGAGAGTTGCAGCG+TGG - chr2_1:45939558-45939577 None:intergenic 65.0%
CACGGCACGGGTTCAAGTCC+TGG - chr2_1:45940278-45940297 None:intergenic 65.0%
GATGGAGGGGAATGGGCCGA+GGG + chr2_1:45941274-45941293 Msa0209090:intron 65.0%
TGGGCCGAGGGAGGTTATGC+AGG + chr2_1:45941286-45941305 Msa0209090:intron 65.0%
GGCAAAGCCGGAGCCAAGTG+GGG - chr2_1:45946005-45946024 None:intergenic 65.0%
TCAGGACCCCCACCAGAAGG+TGG - chr2_1:45948901-45948920 None:intergenic 65.0%
TGCTCAGGACCCCCACCAGA+AGG - chr2_1:45948904-45948923 None:intergenic 65.0%
ATGGTCCTGACCCGCCCGCT+TGG + chr2_1:45939710-45939729 Msa0209090:CDS 70.0%
GGTATCCAAGCGGGCGGGTC+AGG - chr2_1:45939718-45939737 None:intergenic 70.0%
GGTCGGGTATCCAAGCGGGC+GGG - chr2_1:45939723-45939742 None:intergenic 70.0%
GGGTCGGGTATCCAAGCGGG+CGG - chr2_1:45939724-45939743 None:intergenic 70.0%
GGATGGAGGGGAATGGGCCG+AGG + chr2_1:45941273-45941292 Msa0209090:intron 70.0%
GGAGGGGAATGGGCCGAGGG+AGG + chr2_1:45941277-45941296 Msa0209090:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 45939193 45949331 45939193 ID=Msa0209090;Name=Msa0209090
chr2_1 mRNA 45939193 45949331 45939193 ID=Msa0209090-mRNA-1;Parent=Msa0209090;Name=Msa0209090-mRNA-1;_AED=0.12;_eAED=0.12;_QI=212|0.92|0.93|1|0.92|0.86|15|104|733
chr2_1 exon 45939193 45939350 45939193 ID=Msa0209090-mRNA-1:exon:13210;Parent=Msa0209090-mRNA-1
chr2_1 exon 45939436 45939743 45939436 ID=Msa0209090-mRNA-1:exon:13211;Parent=Msa0209090-mRNA-1
chr2_1 exon 45940561 45940690 45940561 ID=Msa0209090-mRNA-1:exon:13212;Parent=Msa0209090-mRNA-1
chr2_1 exon 45940785 45941053 45940785 ID=Msa0209090-mRNA-1:exon:13213;Parent=Msa0209090-mRNA-1
chr2_1 exon 45943157 45943361 45943157 ID=Msa0209090-mRNA-1:exon:13214;Parent=Msa0209090-mRNA-1
chr2_1 exon 45945109 45945149 45945109 ID=Msa0209090-mRNA-1:exon:13215;Parent=Msa0209090-mRNA-1
chr2_1 exon 45945259 45945384 45945259 ID=Msa0209090-mRNA-1:exon:13216;Parent=Msa0209090-mRNA-1
chr2_1 exon 45945586 45945680 45945586 ID=Msa0209090-mRNA-1:exon:13217;Parent=Msa0209090-mRNA-1
chr2_1 exon 45945816 45946036 45945816 ID=Msa0209090-mRNA-1:exon:13218;Parent=Msa0209090-mRNA-1
chr2_1 exon 45947275 45947369 45947275 ID=Msa0209090-mRNA-1:exon:13219;Parent=Msa0209090-mRNA-1
chr2_1 exon 45947475 45947691 45947475 ID=Msa0209090-mRNA-1:exon:13220;Parent=Msa0209090-mRNA-1
chr2_1 exon 45948032 45948157 45948032 ID=Msa0209090-mRNA-1:exon:13221;Parent=Msa0209090-mRNA-1
chr2_1 exon 45948229 45948327 45948229 ID=Msa0209090-mRNA-1:exon:13222;Parent=Msa0209090-mRNA-1
chr2_1 exon 45948823 45949035 45948823 ID=Msa0209090-mRNA-1:exon:13223;Parent=Msa0209090-mRNA-1
chr2_1 exon 45949117 45949331 45949117 ID=Msa0209090-mRNA-1:exon:13224;Parent=Msa0209090-mRNA-1
chr2_1 five_prime_UTR 45939193 45939350 45939193 ID=Msa0209090-mRNA-1:five_prime_utr;Parent=Msa0209090-mRNA-1
chr2_1 five_prime_UTR 45939436 45939489 45939436 ID=Msa0209090-mRNA-1:five_prime_utr;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45939490 45939743 45939490 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45940561 45940690 45940561 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45940785 45941053 45940785 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45943157 45943361 45943157 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45945109 45945149 45945109 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45945259 45945384 45945259 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45945586 45945680 45945586 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45945816 45946036 45945816 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45947275 45947369 45947275 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45947475 45947691 45947475 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45948032 45948157 45948032 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45948229 45948327 45948229 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45948823 45949035 45948823 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 CDS 45949117 45949227 45949117 ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1
chr2_1 three_prime_UTR 45949228 45949331 45949228 ID=Msa0209090-mRNA-1:three_prime_utr;Parent=Msa0209090-mRNA-1
Gene Sequence

>Msa0209090

ATGGCTTACAAATCCTTATCTTCTATCTCTGTATCCGATATTGAATCCCTTGGAATTGCGAGAGACCACGCTGCAACTCTCCACCTGCGTCTCACGGAATTAATAGAAATTCATGGAACTGATGCATCTGCCACGTGGCACAACATCAGCAAGAACATCCTCAGCCCTGAACTTCCGTTTTCGTTTCATCAGATGCTGTATTATGGTTGCTTCAAAGATTATGGTCCTGACCCGCCCGCTTGGATACCCGACCCGGAAAGTGTTACATTGACGAATGTTGGTCGGTTGCTTGAGAAGAGGGGTAAAGAGTTTCTGGGTTCACTGTATAAGGATCCAATTACAGGCTTTGCTGATTTCCAGAAATTTTCAGTCTCAAACCCTGAGGTTTATTGGAAAACTGTGCTGGATGAAATGAACATATCATTTTCTACACAACCTGAATGCATCTTACGTGACAATCCTGGTGAGGACGGTTCATCCTCATACCCAAGTGGTCAATGGCTTCCTGGAGCATCGATTAATCCTGCACAGAATTGCTTGAATTTGAATGGCAAAAGAAATTTGAATGACACGGTGATAATATGGCGTGATGAACTACAAGATGGTCTCCCTCTTCAAAGGATGACACTTGAGGAATTGCGTCAAGAGGTTTGGTTAGTTGCGTATGCTCTTGAATCACTGGGTCTGGAGAAAGGATCTGCAATTGCAATTGATATGCCAATGAATTGTACATCTGTGGTCATCTACCTAGCTATCGTTCTTGCAGGTTATGTTGTTGTATCCATAGCTGATAGTTTTGCGCCACGTGAAATATCAACCAGGCTTAAAATATCAAATGCAAAAGTCATATTTACTCAGGATCTCATACTTCGTGGCGATAAAGCCCTCCCTCTTTACAGTAGAGTTGTGGATGCCCAATCTCCTATGGCAATAGTTATCCCAACTAGAGGCTCCGGATTCAGCATGCAACTGCGTAACGGTGACCTTTCATGGTGTGATTTTTTGGAGAGAGTTGGTAAAATCAAAGGCAAGGAATTCATAGCTGCAGAACAACCAGTAGAAACATTTACAAACATTCTCTTTTCTTCTGGAACAACAGGCAAGTTAAATTTTGTATTCCGTGATCCAAAAGCAATTCCATGGACCAATATTACTCCTCTAAAAGCTGCTGCAGATGCGTGGTGCCACTTGGACGTTCGTAAAGGTGATGTAGTTTGCTGGCCCACTAATCTTGGATGGATGATGGGGCCATGGCTAGTATATGCATCATTGTTAAATGGAGCTTCAATGGCTTTGTATAATGGATCCCCACTTGGCTCCGGCTTTGCCAAATTTGTACAGGATGCTAAAGTAACAATGCTTGGTGTGATTCCAAGTCTTGTACGGAGCTGGAGAAATGCAAATTCTACATCCGGCTATGATTGGTCTGCTATCCGTTGCTTTGCATCCACTGGAGAAGCATCGAACGTAGATGAATACCTTTGGCTGATGGGAAGAGCTTGTTACAAGCCTATCATTGAATATTGTGGTGGTACAGAGATTGGGGGTGGATTCGTCACTGGATCATTACTGCAGGCTCAGTCATTGGCTGCTTTTAGCACACCGGCGATGTGCTGCAATTTGTTTATTCTTGCTGATGATGGGCATCCTATTCCACAAAATGTTCCAGGAATAGGTGAGTTAGCTCTTGGATCCCTTATGCTTGGGGCATCAAACACACTGCTGAATGCTGATCATTATGGTGTCTATTTCAAGGGAATGCCTCTCTGGAATGGAAAGGTTTTACGAAGACATGGAGATGTATTTGAGCGTACTTCTAGAGGATACTATCATGCACATGGTCGTGCAGATGATACAATGAATCTTGGAGGAATCAAGGTGAGTTCGGTTGAAATTGAACGCATATGCAACGGAGTAGATAGTAATATTGTGGAAACAGCTGCCATCGGGATACCACCTTCTGGTGGGGGTCCTGAGCAGTTGTCTGTAGCTGTTGTACTGAAGAATTCAAACATCACACCACAAGATTTACAGAAATTGAGGATGTCTTTTAATTCAGCTCTCCAAAAAACTCTAAATCCATTATTCAGGGTCTCTCAAGTTGTACCAGTGCCATCTCTTCCAAGGACAGCCTCAAACAAGGTTATGAGAAGGGTTTTGCGGCAGAAACTTGCGGAACAAAGCCAAAGTTCTAAAATATAA

Protein sequence

>Msa0209090

MAYKSLSSISVSDIESLGIARDHAATLHLRLTELIEIHGTDASATWHNISKNILSPELPFSFHQMLYYGCFKDYGPDPPAWIPDPESVTLTNVGRLLEKRGKEFLGSLYKDPITGFADFQKFSVSNPEVYWKTVLDEMNISFSTQPECILRDNPGEDGSSSYPSGQWLPGASINPAQNCLNLNGKRNLNDTVIIWRDELQDGLPLQRMTLEELRQEVWLVAYALESLGLEKGSAIAIDMPMNCTSVVIYLAIVLAGYVVVSIADSFAPREISTRLKISNAKVIFTQDLILRGDKALPLYSRVVDAQSPMAIVIPTRGSGFSMQLRNGDLSWCDFLERVGKIKGKEFIAAEQPVETFTNILFSSGTTGKLNFVFRDPKAIPWTNITPLKAAADAWCHLDVRKGDVVCWPTNLGWMMGPWLVYASLLNGASMALYNGSPLGSGFAKFVQDAKVTMLGVIPSLVRSWRNANSTSGYDWSAIRCFASTGEASNVDEYLWLMGRACYKPIIEYCGGTEIGGGFVTGSLLQAQSLAAFSTPAMCCNLFILADDGHPIPQNVPGIGELALGSLMLGASNTLLNADHYGVYFKGMPLWNGKVLRRHGDVFERTSRGYYHAHGRADDTMNLGGIKVSSVEIERICNGVDSNIVETAAIGIPPSGGGPEQLSVAVVLKNSNITPQDLQKLRMSFNSALQKTLNPLFRVSQVVPVPSLPRTASNKVMRRVLRQKLAEQSQSSKI*