Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0209090 | XP_013463987.1 | 96.453 | 733 | 19 | 1 | 1 | 733 | 1 | 726 | 0.0 | 1457 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0209090 | sp|F4KBF3|AAE17_ARATH | 67.711 | 734 | 223 | 4 | 1 | 733 | 1 | 721 | 0.0 | 1013 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0209090 | A0A072V870 | 96.453 | 733 | 19 | 1 | 1 | 733 | 1 | 726 | 0.0 | 1457 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0209090 | Msa0288590 | 0.926959 | 2.285599e-91 | -8.615850e-47 |
Msa0209090 | Msa0326740 | 0.921745 | 2.411129e-88 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0209090 | MtrunA17_Chr2g0307631 | 96.453 | 733 | 19 | 1 | 1 | 733 | 1 | 726 | 0.0 | 1457 |
Msa0209090 | MtrunA17_Chr8g0378581 | 50.543 | 736 | 340 | 10 | 1 | 727 | 1 | 721 | 0.0 | 718 |
Msa0209090 | MtrunA17_Chr8g0378931 | 49.730 | 742 | 338 | 10 | 1 | 727 | 1 | 722 | 0.0 | 695 |
Msa0209090 | MtrunA17_Chr7g0252691 | 25.424 | 590 | 384 | 20 | 166 | 727 | 165 | 726 | 2.87e-33 | 137 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0209090 | AT5G23050.1 | 67.711 | 734 | 223 | 4 | 1 | 733 | 1 | 721 | 0.0 | 1013 |
Msa0209090 | AT5G23050.2 | 67.504 | 597 | 180 | 4 | 1 | 596 | 1 | 584 | 0.0 | 811 |
Msa0209090 | AT1G55320.1 | 48.234 | 736 | 352 | 10 | 3 | 727 | 2 | 719 | 0.0 | 692 |
Msa0209090 | AT1G55320.2 | 54.403 | 511 | 222 | 4 | 219 | 727 | 2 | 503 | 0.0 | 559 |
Msa0209090 | AT5G36880.6 | 25.038 | 655 | 430 | 22 | 102 | 727 | 46 | 668 | 2.36e-33 | 137 |
Msa0209090 | AT5G36880.3 | 25.038 | 655 | 430 | 22 | 102 | 727 | 46 | 668 | 2.36e-33 | 137 |
Msa0209090 | AT5G36880.5 | 25.038 | 655 | 430 | 22 | 102 | 727 | 46 | 668 | 2.36e-33 | 137 |
Msa0209090 | AT5G36880.1 | 25.038 | 655 | 430 | 22 | 102 | 727 | 46 | 668 | 2.36e-33 | 137 |
Msa0209090 | AT5G36880.2 | 25.038 | 655 | 430 | 22 | 102 | 727 | 96 | 718 | 3.03e-33 | 137 |
Msa0209090 | AT5G36880.4 | 25.389 | 579 | 375 | 21 | 102 | 651 | 46 | 596 | 5.36e-27 | 117 |
Find 194 sgRNAs with CRISPR-Local
Find 645 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGAGGGGTAAAGAGTTTC+TGG | 0.130757 | 2_1:+45940600 | Msa0209090:CDS |
GTTTCATACCTGTACAAATT+TGG | 0.172757 | 2_1:-45946023 | None:intergenic |
GGTTTGAGACTGAAAATTTC+TGG | 0.177813 | 2_1:-45940663 | None:intergenic |
TTGTATTGTTTCAGGTTTAT+TGG | 0.214001 | 2_1:+45940771 | Msa0209090:intron |
TATGGTTGCTTCAAAGATTA+TGG | 0.245998 | 2_1:+45939691 | Msa0209090:CDS |
ATTGAAGTGAATTGTAAATA+TGG | 0.256189 | 2_1:+45939471 | Msa0209090:exon |
AAACTCTAAATCCATTATTC+AGG | 0.260045 | 2_1:+45949013 | Msa0209090:CDS |
CTCTTGGATCCCTTATGCTT+GGG | 0.260664 | 2_1:+45948063 | Msa0209090:CDS |
GTTTCTGGGTTCACTGTATA+AGG | 0.284467 | 2_1:+45940615 | Msa0209090:CDS |
GCTTCAATGGCTTTGTATAA+TGG | 0.284939 | 2_1:+45945977 | Msa0209090:CDS |
GGGTGCAACATTGAATTAAA+AGG | 0.288677 | 2_1:+45939329 | Msa0209090:five_prime_UTR |
AAATCAGCAAAGCCTGTAAT+TGG | 0.298240 | 2_1:-45940640 | None:intergenic |
TTGGTCCATGGAATTGCTTT+TGG | 0.305055 | 2_1:-45945821 | None:intergenic |
CCAAGTGGTCAATGGCTTCC+TGG | 0.309999 | 2_1:+45940887 | Msa0209090:CDS |
CTGTATAAGGATCCAATTAC+AGG | 0.315621 | 2_1:+45940628 | Msa0209090:CDS |
TTTCATCAGATGCTGTATTA+TGG | 0.322063 | 2_1:+45939673 | Msa0209090:CDS |
ATAAAGCCCTCCCTCTTTAC+AGG | 0.326956 | 2_1:+45945128 | Msa0209090:CDS |
TACCTAGCTATCGTTCTTGC+AGG | 0.327370 | 2_1:+45943248 | Msa0209090:CDS |
GGTATCCAAGCGGGCGGGTC+AGG | 0.332425 | 2_1:-45939715 | None:intergenic |
TTAATAAGTACCCTGAATAA+TGG | 0.347220 | 2_1:-45949024 | None:intergenic |
GTATATGCATCATTGTTAAA+TGG | 0.350280 | 2_1:+45945953 | Msa0209090:CDS |
TGCGTAACGGTGACCTTTCA+TGG | 0.358514 | 2_1:+45945330 | Msa0209090:CDS |
TGAATGACACGGTGATAATA+TGG | 0.360894 | 2_1:+45940963 | Msa0209090:CDS |
GCTCTTGGATCCCTTATGCT+TGG | 0.362666 | 2_1:+45948062 | Msa0209090:CDS |
TTGTCACGTAAGATGCATTC+AGG | 0.363220 | 2_1:-45940836 | None:intergenic |
CTGCTGAATGCTGATCATTA+TGG | 0.368454 | 2_1:+45948098 | Msa0209090:CDS |
CCACAAAATGTTCCAGGAAT+AGG | 0.388472 | 2_1:+45948032 | Msa0209090:CDS |
CCTTCTCATAACCTTGTTTG+AGG | 0.389200 | 2_1:-45949157 | None:intergenic |
TGCGTATGCTCTTGAATCAC+TGG | 0.389707 | 2_1:+45943163 | Msa0209090:CDS |
TGAAACGAAAACGGAAGTTC+AGG | 0.392374 | 2_1:-45939655 | None:intergenic |
TTGTTTATTCTTGCTGATGA+TGG | 0.394278 | 2_1:+45947659 | Msa0209090:CDS |
ATTGTTAAATGGAGCTTCAA+TGG | 0.395832 | 2_1:+45945964 | Msa0209090:CDS |
CCACCACAATATTCAATGAT+AGG | 0.395928 | 2_1:-45947548 | None:intergenic |
TGCTCTTGAATCACTGGGTC+TGG | 0.402184 | 2_1:+45943169 | Msa0209090:CDS |
ATTTCAAGGGAATGCCTCTC+TGG | 0.405496 | 2_1:+45948126 | Msa0209090:CDS |
GTTTGCTGGCCCACTAATCT+TGG | 0.407233 | 2_1:+45945908 | Msa0209090:CDS |
AACTATTGCCATAGGAGATT+GGG | 0.409276 | 2_1:-45945273 | None:intergenic |
CACTAATCTTGGATGGATGA+TGG | 0.410831 | 2_1:+45945919 | Msa0209090:CDS |
AGAGCTAACTCACCTATTCC+TGG | 0.415085 | 2_1:-45948044 | None:intergenic |
CAGAATTGCTTGAATTTGAA+TGG | 0.415404 | 2_1:+45940929 | Msa0209090:CDS |
CTCCAGCTCCGTACAAGACT+TGG | 0.417401 | 2_1:-45947305 | None:intergenic |
AGGAATTGCGTCAAGAGGTT+TGG | 0.417698 | 2_1:+45941032 | Msa0209090:CDS |
TAACTATTGCCATAGGAGAT+TGG | 0.426580 | 2_1:-45945274 | None:intergenic |
TGTTTGATGCCCCAAGCATA+AGG | 0.427358 | 2_1:-45948073 | None:intergenic |
TCATTATGGTGTCTATTTCA+AGG | 0.428112 | 2_1:+45948112 | Msa0209090:CDS |
ATTGTGGTGGTACAGAGATT+GGG | 0.434744 | 2_1:+45947561 | Msa0209090:CDS |
TATTGTGGTGGTACAGAGAT+TGG | 0.435937 | 2_1:+45947560 | Msa0209090:CDS |
GCCATCGGGATACCACCTTC+TGG | 0.438657 | 2_1:+45948886 | Msa0209090:CDS |
ACGGAATTAATAGAAATTCA+TGG | 0.438816 | 2_1:+45939583 | Msa0209090:CDS |
TTTGTAAAATCGCAAATAGA+AGG | 0.440115 | 2_1:+45939308 | Msa0209090:five_prime_UTR |
CCAGGAAGCCATTGACCACT+TGG | 0.443223 | 2_1:-45940887 | None:intergenic |
ACTAATCTTGGATGGATGAT+GGG | 0.444823 | 2_1:+45945920 | Msa0209090:CDS |
ACGCAGTTGCATGCTGAATC+CGG | 0.445166 | 2_1:-45945312 | None:intergenic |
AATTCCAAGGGATTCAATAT+CGG | 0.447053 | 2_1:-45939524 | None:intergenic |
GCAGATGATACAATGAATCT+TGG | 0.448260 | 2_1:+45948295 | Msa0209090:CDS |
ACCACAGATGTACAATTCAT+TGG | 0.450525 | 2_1:-45943221 | None:intergenic |
CGGCTTTGCCAAATTTGTAC+AGG | 0.453722 | 2_1:+45946015 | Msa0209090:CDS |
ATTCTACATCCGGCTATGAT+TGG | 0.455503 | 2_1:+45947336 | Msa0209090:CDS |
TTACAGCCACAAAATGTTCC+AGG | 0.457728 | 2_1:+45948026 | Msa0209090:intron |
GTAAAGGTGATGTAGTTTGC+TGG | 0.460233 | 2_1:+45945894 | Msa0209090:CDS |
CACAAGATTTACAGAAATTG+AGG | 0.460742 | 2_1:+45948965 | Msa0209090:CDS |
ACCTTGTTTGAGGCTGTCCT+TGG | 0.462874 | 2_1:-45949147 | None:intergenic |
CCATTGACCACTTGGGTATG+AGG | 0.465477 | 2_1:-45940879 | None:intergenic |
TTCCAAGTCTTGTACGGAGC+TGG | 0.467703 | 2_1:+45947303 | Msa0209090:CDS |
CGTAGTTGCTTTGCATCCAC+TGG | 0.469596 | 2_1:+45947470 | Msa0209090:intron |
ATGGTCCTGACCCGCCCGCT+TGG | 0.470246 | 2_1:+45939710 | Msa0209090:CDS |
AACTCTAAATCCATTATTCA+GGG | 0.476877 | 2_1:+45949014 | Msa0209090:CDS |
ATTACTGCAGGCTCAGTCAT+TGG | 0.477853 | 2_1:+45947604 | Msa0209090:CDS |
AACAAATTGCAGCACATCGC+CGG | 0.479445 | 2_1:-45947641 | None:intergenic |
AAATTCAAGCAATTCTGTGC+AGG | 0.479919 | 2_1:-45940923 | None:intergenic |
TTTATTGTAGAAGGTAAGAG+AGG | 0.480576 | 2_1:-45949287 | None:intergenic |
TGCAGATGCGTGGTGCCACT+TGG | 0.483354 | 2_1:+45945865 | Msa0209090:CDS |
GTTGTTTCGATAGGTGAGTT+CGG | 0.483788 | 2_1:+45948810 | Msa0209090:intron |
GCTATGATTGGTCTGCTATC+CGG | 0.484099 | 2_1:+45947348 | Msa0209090:CDS |
CTGAATCCGGAGCCTCTAGT+TGG | 0.485876 | 2_1:-45945299 | None:intergenic |
TGCAAAAGTCATATTTACTC+AGG | 0.486038 | 2_1:+45943340 | Msa0209090:CDS |
CGAACGTAGATGAATACCTT+TGG | 0.486204 | 2_1:+45947501 | Msa0209090:CDS |
CTCAATTTCTGTAAATCTTG+TGG | 0.487036 | 2_1:-45948964 | None:intergenic |
TCGGGATACCACCTTCTGGT+GGG | 0.487293 | 2_1:+45948890 | Msa0209090:CDS |
TACGGGTCGGGTATCCAAGC+GGG | 0.487626 | 2_1:-45939724 | None:intergenic |
TTGTATAATGGATCCCCACT+TGG | 0.489785 | 2_1:+45945989 | Msa0209090:CDS |
GAATCACTGGGTCTGGAGAA+AGG | 0.491276 | 2_1:+45943176 | Msa0209090:CDS |
GGTTTATTGGAAAACTGTGC+TGG | 0.493042 | 2_1:+45940784 | Msa0209090:intron |
TTGTGGAAACAGCTGCCATC+GGG | 0.497471 | 2_1:+45948872 | Msa0209090:CDS |
CTGTACAAATTTGGCAAAGC+CGG | 0.498742 | 2_1:-45946014 | None:intergenic |
GTATCCGATATTGAATCCCT+TGG | 0.499341 | 2_1:+45939520 | Msa0209090:CDS |
AATGAATCTTGGAGGAATCA+AGG | 0.499716 | 2_1:+45948306 | Msa0209090:CDS |
GGAATAGGTGAGTTAGCTCT+TGG | 0.500136 | 2_1:+45948047 | Msa0209090:CDS |
ATGTTTGTAAATGTTTCTAC+TGG | 0.500526 | 2_1:-45945614 | None:intergenic |
AATGGATCCCCACTTGGCTC+CGG | 0.500651 | 2_1:+45945995 | Msa0209090:CDS |
ATCGGGATACCACCTTCTGG+TGG | 0.501807 | 2_1:+45948889 | Msa0209090:CDS |
CATTATGGTGTCTATTTCAA+GGG | 0.501919 | 2_1:+45948113 | Msa0209090:CDS |
AAGGGAATGCCTCTCTGGAA+TGG | 0.502368 | 2_1:+45948131 | Msa0209090:CDS |
GATGAATACCTTTGGCTGAT+GGG | 0.504710 | 2_1:+45947509 | Msa0209090:CDS |
AGATGAATACCTTTGGCTGA+TGG | 0.505224 | 2_1:+45947508 | Msa0209090:CDS |
AGAAATGCAAATTCTACATC+CGG | 0.506535 | 2_1:+45947326 | Msa0209090:CDS |
GTTATCCCAACTAGAGGCTC+CGG | 0.511622 | 2_1:+45945293 | Msa0209090:CDS |
AGCATCTGATGAAACGAAAA+CGG | 0.513623 | 2_1:-45939664 | None:intergenic |
GCTGGCCCACTAATCTTGGA+TGG | 0.513777 | 2_1:+45945912 | Msa0209090:CDS |
CCTCATACCCAAGTGGTCAA+TGG | 0.513890 | 2_1:+45940879 | Msa0209090:CDS |
GTTAAGAGAGCATACGGGTC+GGG | 0.514536 | 2_1:-45939736 | None:intergenic |
CGGGATACCACCTTCTGGTG+GGG | 0.515510 | 2_1:+45948891 | Msa0209090:CDS |
AAGAGGGGTAAAGAGTTTCT+GGG | 0.520650 | 2_1:+45940601 | Msa0209090:CDS |
GTGTGATTCCAAGTCTTGTA+CGG | 0.520853 | 2_1:+45947297 | Msa0209090:CDS |
CGGAGTAGATAGTAATATTG+TGG | 0.522745 | 2_1:+45948855 | Msa0209090:CDS |
AGTGTTACATTGACGAATGT+TGG | 0.524475 | 2_1:+45940565 | Msa0209090:CDS |
TTGTGGTGGTACAGAGATTG+GGG | 0.524936 | 2_1:+45947562 | Msa0209090:CDS |
TGAATCCGGAGCCTCTAGTT+GGG | 0.525577 | 2_1:-45945298 | None:intergenic |
GATGCTAAAGTAACAATGCT+TGG | 0.525722 | 2_1:+45947275 | Msa0209090:CDS |
TGTTTATTCTTGCTGATGAT+GGG | 0.526507 | 2_1:+45947660 | Msa0209090:CDS |
CATCATCCATCCAAGATTAG+TGG | 0.527349 | 2_1:-45945918 | None:intergenic |
CGTGGTCTCTCGCAATTCCA+AGG | 0.529030 | 2_1:-45939537 | None:intergenic |
TGGTCGGTTGCTTGAGAAGA+GGG | 0.529807 | 2_1:+45940585 | Msa0209090:CDS |
TTGTAAAATCGCAAATAGAA+GGG | 0.531211 | 2_1:+45939309 | Msa0209090:five_prime_UTR |
AACTCTCCACCTGCGTCTCA+CGG | 0.534211 | 2_1:+45939564 | Msa0209090:CDS |
CTCAAACAAGGTTATGAGAA+GGG | 0.538467 | 2_1:+45949158 | Msa0209090:CDS |
GGGATACCACCTTCTGGTGG+GGG | 0.539711 | 2_1:+45948892 | Msa0209090:CDS |
AAGCCTATCATTGAATATTG+TGG | 0.541124 | 2_1:+45947545 | Msa0209090:CDS |
GAAACGAAAACGGAAGTTCA+GGG | 0.542308 | 2_1:-45939654 | None:intergenic |
TCTTGGATCCCTTATGCTTG+GGG | 0.542370 | 2_1:+45948064 | Msa0209090:CDS |
TGTGGATGCCCAATCTCCTA+TGG | 0.543453 | 2_1:+45945265 | Msa0209090:CDS |
CTATTAATTCCGTGAGACGC+AGG | 0.543711 | 2_1:-45939573 | None:intergenic |
GAGGATGAACCGTCCTCACC+AGG | 0.544024 | 2_1:-45940860 | None:intergenic |
TGGCGCAAAACTATCAGCTA+TGG | 0.551994 | 2_1:-45943285 | None:intergenic |
GGATACAGAGATAGAAGATA+AGG | 0.552282 | 2_1:-45939503 | None:intergenic |
GATGATACAATGAATCTTGG+AGG | 0.554940 | 2_1:+45948298 | Msa0209090:CDS |
GAGGCTGTCCTTGGAAGAGA+TGG | 0.555835 | 2_1:-45949138 | None:intergenic |
GGTCGGGTATCCAAGCGGGC+GGG | 0.559168 | 2_1:-45939720 | None:intergenic |
TGGCAAAGCCGGAGCCAAGT+GGG | 0.563691 | 2_1:-45946003 | None:intergenic |
GTGATCCAAAAGCAATTCCA+TGG | 0.566214 | 2_1:+45945816 | Msa0209090:CDS |
TGTCAGGATCTCATACTTCG+TGG | 0.566472 | 2_1:+45945103 | Msa0209090:intron |
CGTCACTGGATCATTACTGC+AGG | 0.568727 | 2_1:+45947592 | Msa0209090:CDS |
TTGGATGGATGATGGGGCCA+TGG | 0.568895 | 2_1:+45945927 | Msa0209090:CDS |
AGAGGAGTAATATTGGTCCA+TGG | 0.570021 | 2_1:-45945833 | None:intergenic |
ATCATCCATCCAAGATTAGT+GGG | 0.571504 | 2_1:-45945917 | None:intergenic |
ACAGCTACAGACAACTGCTC+AGG | 0.571958 | 2_1:-45948916 | None:intergenic |
GCAGGATTAATCGATGCTCC+AGG | 0.573116 | 2_1:-45940905 | None:intergenic |
TGCCACTTGGACGTTCGTAA+AGG | 0.578559 | 2_1:+45945878 | Msa0209090:CDS |
TACGTTCGATGCTTCTCCAG+TGG | 0.579680 | 2_1:-45947486 | None:intergenic |
AAGATGGTCTCCCTCTTCAA+AGG | 0.580818 | 2_1:+45940999 | Msa0209090:CDS |
AAAACGGAAGTTCAGGGCTG+AGG | 0.582396 | 2_1:-45939648 | None:intergenic |
TCAAGTGTCATCCTTTGAAG+AGG | 0.583835 | 2_1:-45941010 | None:intergenic |
ATTGTGGAAACAGCTGCCAT+CGG | 0.586223 | 2_1:+45948871 | Msa0209090:CDS |
GTTTGATGCCCCAAGCATAA+GGG | 0.591517 | 2_1:-45948072 | None:intergenic |
GTTGGGATAACTATTGCCAT+AGG | 0.593786 | 2_1:-45945281 | None:intergenic |
GTCCTTGGAAGAGATGGCAC+TGG | 0.593944 | 2_1:-45949132 | None:intergenic |
TGCATCTTACGTGACAATCC+TGG | 0.597430 | 2_1:+45940842 | Msa0209090:CDS |
CGTGACAATCCTGGTGAGGA+CGG | 0.597702 | 2_1:+45940851 | Msa0209090:CDS |
GGGTCGGGTATCCAAGCGGG+CGG | 0.598636 | 2_1:-45939721 | None:intergenic |
CGCCACGTGAAATATCAACC+AGG | 0.599497 | 2_1:+45943303 | Msa0209090:CDS |
AATGATGCATATACTAGCCA+TGG | 0.600506 | 2_1:-45945944 | None:intergenic |
GATAGCAGACCAATCATAGC+CGG | 0.600611 | 2_1:-45947345 | None:intergenic |
ACTTGAGGAATTGCGTCAAG+AGG | 0.601240 | 2_1:+45941027 | Msa0209090:CDS |
CTAATCTTGGATGGATGATG+GGG | 0.601678 | 2_1:+45945921 | Msa0209090:CDS |
GTATTTGAGCGTACTTCTAG+AGG | 0.601910 | 2_1:+45948250 | Msa0209090:CDS |
TTGGTCGGTTGCTTGAGAAG+AGG | 0.603512 | 2_1:+45940584 | Msa0209090:CDS |
TTCAGCATGCAACTGCGTAA+CGG | 0.605673 | 2_1:+45945317 | Msa0209090:CDS |
TCCCAAATGCAGTAGAGTTG+TGG | 0.606869 | 2_1:+45945247 | Msa0209090:intron |
TAAAAGCTGCTGCAGATGCG+TGG | 0.607205 | 2_1:+45945855 | Msa0209090:CDS |
TACCAGTGCCATCTCTTCCA+AGG | 0.607221 | 2_1:+45949130 | Msa0209090:CDS |
GCGTATGCTCTTGAATCACT+GGG | 0.609635 | 2_1:+45943164 | Msa0209090:CDS |
CCTCAAACAAGGTTATGAGA+AGG | 0.610766 | 2_1:+45949157 | Msa0209090:CDS |
TCATGTAAAATACAGAGGCA+AGG | 0.615184 | 2_1:+45945571 | Msa0209090:intron |
CAAGTGTCATCCTTTGAAGA+GGG | 0.616887 | 2_1:-45941009 | None:intergenic |
GGCAAAGCCGGAGCCAAGTG+GGG | 0.618733 | 2_1:-45946002 | None:intergenic |
GTGGTCTCTCGCAATTCCAA+GGG | 0.619247 | 2_1:-45939536 | None:intergenic |
TCCAAGGACAGCCTCAAACA+AGG | 0.622443 | 2_1:+45949146 | Msa0209090:CDS |
CACCTTTACGAACGTCCAAG+TGG | 0.624594 | 2_1:-45945880 | None:intergenic |
TCTTCAAAGGATGACACTTG+AGG | 0.625524 | 2_1:+45941012 | Msa0209090:CDS |
CAGGAAGCCATTGACCACTT+GGG | 0.627950 | 2_1:-45940886 | None:intergenic |
AGCCTGGTTGATATTTCACG+TGG | 0.628870 | 2_1:-45943305 | None:intergenic |
GCAATAGTTATCCCAACTAG+AGG | 0.631298 | 2_1:+45945287 | Msa0209090:CDS |
CAAAAGAAATTTGAATGACA+CGG | 0.631430 | 2_1:+45940952 | Msa0209090:CDS |
GAAATTGAACGCATATGCAA+CGG | 0.631869 | 2_1:+45948835 | Msa0209090:CDS |
AAGCTCTTCCCATCAGCCAA+AGG | 0.637210 | 2_1:-45947517 | None:intergenic |
AACCTGCAAGAACGATAGCT+AGG | 0.637454 | 2_1:-45943250 | None:intergenic |
ACCAGAAGGTGGTATCCCGA+TGG | 0.638315 | 2_1:-45948887 | None:intergenic |
CCTATCATTGAATATTGTGG+TGG | 0.640679 | 2_1:+45947548 | Msa0209090:CDS |
TGGCGTGATGAACTACAAGA+TGG | 0.642548 | 2_1:+45940983 | Msa0209090:CDS |
CTTGCTGATGTTGTGCCACG+TGG | 0.645928 | 2_1:-45939620 | None:intergenic |
TTGGCAAAGCCGGAGCCAAG+TGG | 0.645965 | 2_1:-45946004 | None:intergenic |
AATGCCTCTCTGGAATGGAA+AGG | 0.647832 | 2_1:+45948136 | Msa0209090:CDS |
GGTCGGTTGCTTGAGAAGAG+GGG | 0.647991 | 2_1:+45940586 | Msa0209090:CDS |
TTACATTGACGAATGTTGGT+CGG | 0.649277 | 2_1:+45940569 | Msa0209090:CDS |
TTAATTCCGTGAGACGCAGG+TGG | 0.656956 | 2_1:-45939570 | None:intergenic |
GCCAATGAATTGTACATCTG+TGG | 0.666720 | 2_1:+45943220 | Msa0209090:CDS |
AGAGGATACTATCATGCACA+TGG | 0.684640 | 2_1:+45948268 | Msa0209090:CDS |
CTTACGTGACAATCCTGGTG+AGG | 0.695639 | 2_1:+45940847 | Msa0209090:CDS |
ATACGGGTCGGGTATCCAAG+CGG | 0.702012 | 2_1:-45939725 | None:intergenic |
TGTGGTGGTACAGAGATTGG+GGG | 0.703383 | 2_1:+45947563 | Msa0209090:CDS |
TCTACCTTTCCATTCCAGAG+AGG | 0.716419 | 2_1:-45948140 | None:intergenic |
GCAGGTGGAGAGTTGCAGCG+TGG | 0.736414 | 2_1:-45939555 | None:intergenic |
GGTTCATCCTCATACCCAAG+TGG | 0.740054 | 2_1:+45940872 | Msa0209090:CDS |
GAACTGATGCATCTGCCACG+TGG | 0.760171 | 2_1:+45939605 | Msa0209090:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTTTTTTTTTATATT+TGG | + | chr2_1:45940728-45940747 | Msa0209090:intron | 0.0% |
!! | AATAAATAATAAGATTATCT+TGG | - | chr2_1:45940700-45940719 | None:intergenic | 10.0% |
!!! | ATAATTTTTAAGAGTATTTT+TGG | - | chr2_1:45942667-45942686 | None:intergenic | 10.0% |
!! | AAAATAAATATTATCAACTT+CGG | - | chr2_1:45942950-45942969 | None:intergenic | 10.0% |
!!! | TTGAAAATTTTCTTATATAT+AGG | - | chr2_1:45943691-45943710 | None:intergenic | 10.0% |
!!! | AAAATTTTCAAAAAAATTGT+TGG | + | chr2_1:45943700-45943719 | Msa0209090:intron | 10.0% |
!!! | TGTTGAAATTATTTTAATAT+AGG | - | chr2_1:45944946-45944965 | None:intergenic | 10.0% |
!! | TATTTATAGTTATAGAATTT+CGG | + | chr2_1:45945406-45945425 | Msa0209090:intron | 10.0% |
!!! | TATTTTACATGATAATAAAT+GGG | - | chr2_1:45945563-45945582 | None:intergenic | 10.0% |
!! | TATATATATATATCATAGTT+TGG | + | chr2_1:45946336-45946355 | Msa0209090:intron | 10.0% |
!!! | TTTTAATTGTTGAATTTTAT+TGG | + | chr2_1:45946391-45946410 | Msa0209090:intron | 10.0% |
!! | TCTCATTTAATAATAAAAAA+TGG | + | chr2_1:45946558-45946577 | Msa0209090:intron | 10.0% |
!! | GAAAAATAAGCTATAAAAAA+AGG | + | chr2_1:45940187-45940206 | Msa0209090:intron | 15.0% |
!! | ATTAAACAATTCATAACAAA+TGG | - | chr2_1:45941077-45941096 | None:intergenic | 15.0% |
!!! | ATTTGTTATGAATTGTTTAA+TGG | + | chr2_1:45941076-45941095 | Msa0209090:intron | 15.0% |
!!! | AAAATGTAAAAGTATCTTTT+AGG | - | chr2_1:45942356-45942375 | None:intergenic | 15.0% |
!! | TACTCTTAAAAATTATGTTA+TGG | + | chr2_1:45942671-45942690 | Msa0209090:intron | 15.0% |
!! | AAAGTAATCAAAAGATATTA+GGG | - | chr2_1:45943372-45943391 | None:intergenic | 15.0% |
!! | AAAAGTAATCAAAAGATATT+AGG | - | chr2_1:45943373-45943392 | None:intergenic | 15.0% |
!!! | TTTTATTACTGTTGATTATT+TGG | + | chr2_1:45943446-45943465 | Msa0209090:intron | 15.0% |
!!! | TTTATTACTGTTGATTATTT+GGG | + | chr2_1:45943447-45943466 | Msa0209090:intron | 15.0% |
!!! | TATAATAGATAAAGTATCTT+AGG | - | chr2_1:45943657-45943676 | None:intergenic | 15.0% |
!!! | TGTGATATTTTCTTATAAAT+AGG | - | chr2_1:45943727-45943746 | None:intergenic | 15.0% |
!! | AAAAGACAAACATTAAATAA+GGG | - | chr2_1:45943789-45943808 | None:intergenic | 15.0% |
!! | AAAAAGACAAACATTAAATA+AGG | - | chr2_1:45943790-45943809 | None:intergenic | 15.0% |
!!! | TAAGATTTTATTTGTTTTGA+AGG | - | chr2_1:45944700-45944719 | None:intergenic | 15.0% |
!! | ATTATGAATCTAGTAAAAAT+AGG | + | chr2_1:45944832-45944851 | Msa0209090:intron | 15.0% |
!!! | AAATTATTTTAATATAGGCA+GGG | - | chr2_1:45944941-45944960 | None:intergenic | 15.0% |
!! | ATATCAAATTATTGATAAAC+AGG | - | chr2_1:45945204-45945223 | None:intergenic | 15.0% |
!!! | GTATTTTACATGATAATAAA+TGG | - | chr2_1:45945564-45945583 | None:intergenic | 15.0% |
!!! | TTTTATTATTGTTAGTTCTT+GGG | - | chr2_1:45946529-45946548 | None:intergenic | 15.0% |
!!! | ATTTTATTATTGTTAGTTCT+TGG | - | chr2_1:45946530-45946549 | None:intergenic | 15.0% |
!!! | AGCTTTCAATTTTTTTTTAA+AGG | - | chr2_1:45946831-45946850 | None:intergenic | 15.0% |
!! | TTAAGTATTTAATCATCTAT+TGG | - | chr2_1:45947982-45948001 | None:intergenic | 15.0% |
!! | AATAATGTAGTTTGATTATT+AGG | + | chr2_1:45948352-45948371 | Msa0209090:intron | 15.0% |
!!! | TATTTTATACAACAAAGTTA+AGG | - | chr2_1:45948415-45948434 | None:intergenic | 15.0% |
!!! | ATTGTTATATTTTAGAACTT+TGG | - | chr2_1:45949212-45949231 | None:intergenic | 15.0% |
!!! | TGTTATTACTTTTGAATTTC+AGG | + | chr2_1:45939414-45939433 | Msa0209090:intron | 20.0% |
!! | ATTGAAGTGAATTGTAAATA+TGG | + | chr2_1:45939471-45939490 | Msa0209090:exon | 20.0% |
!!! | TTCTTTAGTTTGTTTGAAAA+TGG | + | chr2_1:45939789-45939808 | Msa0209090:intron | 20.0% |
!! | AATAATAAGATTATCTTGGA+TGG | - | chr2_1:45940696-45940715 | None:intergenic | 20.0% |
!!! | TTGTTATTTTGTATTGTTTC+AGG | + | chr2_1:45940763-45940782 | Msa0209090:intron | 20.0% |
!!! | AAAACATCGTCTTTAAAAAT+TGG | - | chr2_1:45941125-45941144 | None:intergenic | 20.0% |
!! | AACAAACATTTGTTTAAGAA+AGG | - | chr2_1:45941233-45941252 | None:intergenic | 20.0% |
!! | CAATTGAATTTGACAAAATA+AGG | + | chr2_1:45941364-45941383 | Msa0209090:intron | 20.0% |
!!! | GTTTTAGAATAAATATAGAC+AGG | + | chr2_1:45941649-45941668 | Msa0209090:intron | 20.0% |
!!! | TTCTATCAACTTTGTTTTAA+AGG | + | chr2_1:45942007-45942026 | Msa0209090:intron | 20.0% |
!! | CAAAAAAAATTCTGACAATA+GGG | - | chr2_1:45942081-45942100 | None:intergenic | 20.0% |
!!! | TATTGAAATTTGGTAGATTT+TGG | + | chr2_1:45942242-45942261 | Msa0209090:intron | 20.0% |
!!! | CTTTTACATTTTATGAGATT+TGG | + | chr2_1:45942364-45942383 | Msa0209090:intron | 20.0% |
!!! | GAAATTTTTATCTCATTCTT+AGG | - | chr2_1:45942645-45942664 | None:intergenic | 20.0% |
!!! | ATCTACCATCTATATTTTTT+TGG | - | chr2_1:45943000-45943019 | None:intergenic | 20.0% |
!!! | GTAGACTTTTGAATTTAAAA+TGG | + | chr2_1:45943045-45943064 | Msa0209090:intron | 20.0% |
!! | ACAGTAATAAAACAATTACT+TGG | - | chr2_1:45943438-45943457 | None:intergenic | 20.0% |
!!! | AATTTTCTTATATATAGGAC+CGG | - | chr2_1:45943686-45943705 | None:intergenic | 20.0% |
!!! | AGAAAATATCACAACTTTTA+AGG | + | chr2_1:45943734-45943753 | Msa0209090:intron | 20.0% |
!! | AAAGACAAACATTAAATAAG+GGG | - | chr2_1:45943788-45943807 | None:intergenic | 20.0% |
!!! | TGGTTTTTCTTCTTATATTA+AGG | + | chr2_1:45943917-45943936 | Msa0209090:intron | 20.0% |
!! | AAATAGTGATAAAACATTGA+CGG | + | chr2_1:45944293-45944312 | Msa0209090:intron | 20.0% |
!! | ATTTGTTCCATTAGTTAATT+AGG | + | chr2_1:45944809-45944828 | Msa0209090:intron | 20.0% |
!! | TCATAATCCTAATTAACTAA+TGG | - | chr2_1:45944819-45944838 | None:intergenic | 20.0% |
!!! | ATTTGATATCGATTATGTAA+AGG | - | chr2_1:45944881-45944900 | None:intergenic | 20.0% |
!!! | GAAATTATTTTAATATAGGC+AGG | - | chr2_1:45944942-45944961 | None:intergenic | 20.0% |
!! | TATTATCATGTAAAATACAG+AGG | + | chr2_1:45945566-45945585 | Msa0209090:intron | 20.0% |
!! | AAATATGTAAAATTTCAGGA+CGG | - | chr2_1:45945682-45945701 | None:intergenic | 20.0% |
!! | GTCTAAATATGTAAAATTTC+AGG | - | chr2_1:45945686-45945705 | None:intergenic | 20.0% |
!!! | GGTATATTTCTTTTTTATGT+TGG | - | chr2_1:45946508-45946527 | None:intergenic | 20.0% |
!!! | AGATTAGCTATATAAAAAGA+CGG | + | chr2_1:45946689-45946708 | Msa0209090:intron | 20.0% |
!!! | TTTAAAATTTACGAACAGTT+CGG | - | chr2_1:45946909-45946928 | None:intergenic | 20.0% |
!! | TATGTATATCTAATGTTGAT+AGG | - | chr2_1:45947059-45947078 | None:intergenic | 20.0% |
!! | TTGTAATAATAAAGACATAC+AGG | - | chr2_1:45947832-45947851 | None:intergenic | 20.0% |
!!! | CATTTGAATTTTTACAAGAT+TGG | - | chr2_1:45947917-45947936 | None:intergenic | 20.0% |
!! | AGAAATTGAAGATATCATAA+AGG | - | chr2_1:45948177-45948196 | None:intergenic | 20.0% |
!! | AAAGTGTAACAATTCAAAAT+TGG | + | chr2_1:45948434-45948453 | Msa0209090:intron | 20.0% |
!!! | ATTAGTTATTTTCAGTAACT+AGG | - | chr2_1:45948605-45948624 | None:intergenic | 20.0% |
!! | AGAATCTATATTAAGTGAAA+AGG | - | chr2_1:45948700-45948719 | None:intergenic | 20.0% |
!!! | ATAATGGATTTAGAGTTTTT+TGG | - | chr2_1:45949011-45949030 | None:intergenic | 20.0% |
! | TTTGTAAAATCGCAAATAGA+AGG | + | chr2_1:45939308-45939327 | Msa0209090:five_prime_UTR | 25.0% |
! | TTGTAAAATCGCAAATAGAA+GGG | + | chr2_1:45939309-45939328 | Msa0209090:five_prime_UTR | 25.0% |
! | ACGGAATTAATAGAAATTCA+TGG | + | chr2_1:45939583-45939602 | Msa0209090:CDS | 25.0% |
!! | TAGCTTATCTTTTATACAAG+TGG | - | chr2_1:45940335-45940354 | None:intergenic | 25.0% |
! | TAAGAATGTACAAAAATTGC+TGG | - | chr2_1:45940403-45940422 | None:intergenic | 25.0% |
!!! | ACATTTTCGTTTTTTCAGTT+AGG | + | chr2_1:45940423-45940442 | Msa0209090:intron | 25.0% |
!!! | CATTTTCGTTTTTTCAGTTA+GGG | + | chr2_1:45940424-45940443 | Msa0209090:intron | 25.0% |
! | AGTTGTGATTATGAAGTAAA+AGG | + | chr2_1:45940508-45940527 | Msa0209090:intron | 25.0% |
!!! | TTCTTTTGTTTGTTGTGATT+AGG | + | chr2_1:45940539-45940558 | Msa0209090:intron | 25.0% |
!!! | TCTTTTGTTTGTTGTGATTA+GGG | + | chr2_1:45940540-45940559 | Msa0209090:intron | 25.0% |
! | CAAAATAACAATGACAAACA+CGG | - | chr2_1:45940754-45940773 | None:intergenic | 25.0% |
!!! | TTGTATTGTTTCAGGTTTAT+TGG | + | chr2_1:45940771-45940790 | Msa0209090:intron | 25.0% |
! | CAAAAGAAATTTGAATGACA+CGG | + | chr2_1:45940952-45940971 | Msa0209090:CDS | 25.0% |
! | ACAATTCATAACAAATGGAT+AGG | - | chr2_1:45941072-45941091 | None:intergenic | 25.0% |
!! | ATGTTTGTTAGATAAAACAG+AGG | + | chr2_1:45941244-45941263 | Msa0209090:intron | 25.0% |
!! | TGTTTGTTAGATAAAACAGA+GGG | + | chr2_1:45941245-45941264 | Msa0209090:intron | 25.0% |
! | GGAAGGAAATAAACTTAATT+AGG | + | chr2_1:45941403-45941422 | Msa0209090:intron | 25.0% |
! | GGAAATAAACTTAATTAGGA+AGG | + | chr2_1:45941407-45941426 | Msa0209090:intron | 25.0% |
!!! | GGATATTTCTGATTTGTTAT+GGG | + | chr2_1:45941691-45941710 | Msa0209090:intron | 25.0% |
! | TCTACTATTAAAGTGTACTT+TGG | + | chr2_1:45941885-45941904 | Msa0209090:intron | 25.0% |
! | CCAAAAAAAATTCTGACAAT+AGG | - | chr2_1:45942082-45942101 | None:intergenic | 25.0% |
!!! | CCTATTGTCAGAATTTTTTT+TGG | + | chr2_1:45942079-45942098 | Msa0209090:intron | 25.0% |
! | ACGAAATTGAATTTATACTC+TGG | - | chr2_1:45942214-45942233 | None:intergenic | 25.0% |
! | AGAGTATAAATTCAATTTCG+TGG | + | chr2_1:45942213-45942232 | Msa0209090:intron | 25.0% |
!!! | AAATTTGGTAGATTTTGGTT+TGG | + | chr2_1:45942247-45942266 | Msa0209090:intron | 25.0% |
! | TCTATATTCTCTGGTATAAT+TGG | - | chr2_1:45942274-45942293 | None:intergenic | 25.0% |
! | ACGATAGCAAAGAATATAAA+CGG | + | chr2_1:45942293-45942312 | Msa0209090:intron | 25.0% |
!! | TTTAGGACATCATAAAGTTA+GGG | - | chr2_1:45942339-45942358 | None:intergenic | 25.0% |
!!! | TTTTAGGACATCATAAAGTT+AGG | - | chr2_1:45942340-45942359 | None:intergenic | 25.0% |
!! | TTTGAAGCAATATTGTCAAT+AGG | + | chr2_1:45942488-45942507 | Msa0209090:intron | 25.0% |
! | TTGAAGCAATATTGTCAATA+GGG | + | chr2_1:45942489-45942508 | Msa0209090:intron | 25.0% |
!! | ATTATGTTATGGTTTTTGAC+TGG | + | chr2_1:45942682-45942701 | Msa0209090:intron | 25.0% |
!!! | TTATGTTATGGTTTTTGACT+GGG | + | chr2_1:45942683-45942702 | Msa0209090:intron | 25.0% |
! | TCGCAATTAAAACAAAATAC+CGG | + | chr2_1:45942720-45942739 | Msa0209090:intron | 25.0% |
! | ACGATTTATACTATGTACAT+AGG | - | chr2_1:45942844-45942863 | None:intergenic | 25.0% |
!!! | TATATTTTTTTGGCACAAGT+TGG | - | chr2_1:45942990-45943009 | None:intergenic | 25.0% |
! | TTGTGCCAAAAAAATATAGA+TGG | + | chr2_1:45942992-45943011 | Msa0209090:intron | 25.0% |
! | ATTTGTTTCCTCGTTAAATT+TGG | - | chr2_1:45943585-45943604 | None:intergenic | 25.0% |
!!! | ATGCTACACAATTTTTTATG+AGG | + | chr2_1:45943830-45943849 | Msa0209090:intron | 25.0% |
!!! | TGCTACACAATTTTTTATGA+GGG | + | chr2_1:45943831-45943850 | Msa0209090:intron | 25.0% |
!!! | GTATTGGTTTTGATGTTTTT+TGG | + | chr2_1:45943897-45943916 | Msa0209090:intron | 25.0% |
! | TTTCTTCTTATATTAAGGAC+CGG | + | chr2_1:45943922-45943941 | Msa0209090:intron | 25.0% |
!!! | ATTTTTTCCTTAAGTGTGTT+CGG | - | chr2_1:45944020-45944039 | None:intergenic | 25.0% |
! | TTGTGACAAATTCTTTCTAA+AGG | - | chr2_1:45944142-45944161 | None:intergenic | 25.0% |
!! | TCACTATTTTACCTGTTTTA+TGG | - | chr2_1:45944282-45944301 | None:intergenic | 25.0% |
! | TAAATGATCAACTAGTACAA+AGG | - | chr2_1:45944338-45944357 | None:intergenic | 25.0% |
! | ATTTAGGAAGAAACTAAAGT+AGG | - | chr2_1:45944672-45944691 | None:intergenic | 25.0% |
!!! | TGTTTTGAAGGTTAACATTT+AGG | - | chr2_1:45944688-45944707 | None:intergenic | 25.0% |
!! | TCCTTTTAACAGTTTAGTAA+TGG | + | chr2_1:45945157-45945176 | Msa0209090:intron | 25.0% |
! | TCCATTACTAAACTGTTAAA+AGG | - | chr2_1:45945161-45945180 | None:intergenic | 25.0% |
!! | ATGTTTGTAAATGTTTCTAC+TGG | - | chr2_1:45945617-45945636 | None:intergenic | 25.0% |
! | ATCTTGATACAAGAAATTTG+AGG | + | chr2_1:45945710-45945729 | Msa0209090:intron | 25.0% |
! | CTTCAATCACTTTATTAATC+TGG | + | chr2_1:45945758-45945777 | Msa0209090:intron | 25.0% |
! | GTATATGCATCATTGTTAAA+TGG | + | chr2_1:45945953-45945972 | Msa0209090:CDS | 25.0% |
! | TTGATAGGAAAGAAAAGATA+CGG | - | chr2_1:45946077-45946096 | None:intergenic | 25.0% |
!! | ATCTTTTCTTTCCTATCAAT+AGG | + | chr2_1:45946078-45946097 | Msa0209090:intron | 25.0% |
!! | TCTTTTCTTTCCTATCAATA+GGG | + | chr2_1:45946079-45946098 | Msa0209090:intron | 25.0% |
!!! | GAAGTGAAAAAAGTATTTTG+AGG | + | chr2_1:45946358-45946377 | Msa0209090:intron | 25.0% |
!! | ATATCTAATGTTGATAGGTA+GGG | - | chr2_1:45947054-45947073 | None:intergenic | 25.0% |
!! | TATATCTAATGTTGATAGGT+AGG | - | chr2_1:45947055-45947074 | None:intergenic | 25.0% |
! | AAAATTGGTAGAACAATGTA+AGG | + | chr2_1:45948449-45948468 | Msa0209090:intron | 25.0% |
! | TATATGATATCAACATCCAT+AGG | + | chr2_1:45948514-45948533 | Msa0209090:intron | 25.0% |
!!! | TTCGTCTTTGGAATAAAAAT+TGG | + | chr2_1:45948555-45948574 | Msa0209090:intron | 25.0% |
!!! | TCGTCTTTGGAATAAAAATT+GGG | + | chr2_1:45948556-45948575 | Msa0209090:intron | 25.0% |
! | AAACTCTAAATCCATTATTC+AGG | + | chr2_1:45949013-45949032 | Msa0209090:CDS | 25.0% |
! | AACTCTAAATCCATTATTCA+GGG | + | chr2_1:45949014-45949033 | Msa0209090:CDS | 25.0% |
! | TTAATAAGTACCCTGAATAA+TGG | - | chr2_1:45949027-45949046 | None:intergenic | 25.0% |
!! | CGTAAAGTTTTTATTGTAGA+AGG | - | chr2_1:45949299-45949318 | None:intergenic | 25.0% |
AATTCCAAGGGATTCAATAT+CGG | - | chr2_1:45939527-45939546 | None:intergenic | 30.0% | |
TTTCATCAGATGCTGTATTA+TGG | + | chr2_1:45939673-45939692 | Msa0209090:CDS | 30.0% | |
TATGGTTGCTTCAAAGATTA+TGG | + | chr2_1:45939691-45939710 | Msa0209090:CDS | 30.0% | |
! | TGCTATTTGTGTTACTACTA+TGG | + | chr2_1:45939921-45939940 | Msa0209090:intron | 30.0% |
!! | CAAGTTGTTGATTTCTTCAT+CGG | + | chr2_1:45939987-45940006 | Msa0209090:intron | 30.0% |
ATAATTGACGATGGTCTAAT+TGG | + | chr2_1:45940015-45940034 | Msa0209090:intron | 30.0% | |
AAACAGATACTACACTAACT+AGG | - | chr2_1:45940099-45940118 | None:intergenic | 30.0% | |
GTCTAAACTAAATGACTCTT+GGG | - | chr2_1:45940155-45940174 | None:intergenic | 30.0% | |
AGTCTAAACTAAATGACTCT+TGG | - | chr2_1:45940156-45940175 | None:intergenic | 30.0% | |
CAGAATTGCTTGAATTTGAA+TGG | + | chr2_1:45940929-45940948 | Msa0209090:CDS | 30.0% | |
CAAATTCAATTGTGAGTGAT+TGG | - | chr2_1:45941356-45941375 | None:intergenic | 30.0% | |
TAAGGATGCAACTAGTTATA+AGG | + | chr2_1:45941382-45941401 | Msa0209090:intron | 30.0% | |
ACAATCTGCAAAAATGGAAA+TGG | + | chr2_1:45941452-45941471 | Msa0209090:intron | 30.0% | |
TCATAAGAAGTCTAACAGAA+AGG | - | chr2_1:45941557-45941576 | None:intergenic | 30.0% | |
TTCTGTTAGACTTCTTATGA+TGG | + | chr2_1:45941557-45941576 | Msa0209090:intron | 30.0% | |
TCAGTTATGTATAGCAGTTA+TGG | + | chr2_1:45941611-45941630 | Msa0209090:intron | 30.0% | |
CAGTTATGTATAGCAGTTAT+GGG | + | chr2_1:45941612-45941631 | Msa0209090:intron | 30.0% | |
AGGAAAGATGAAAGTGATTA+TGG | + | chr2_1:45941669-45941688 | Msa0209090:intron | 30.0% | |
GGAAAGATGAAAGTGATTAT+GGG | + | chr2_1:45941670-45941689 | Msa0209090:intron | 30.0% | |
!! | GGGATATTTCTGATTTGTTA+TGG | + | chr2_1:45941690-45941709 | Msa0209090:intron | 30.0% |
!! | TATTTCTGATTTGTTATGGG+AGG | + | chr2_1:45941694-45941713 | Msa0209090:intron | 30.0% |
!! | ATTTCTGATTTGTTATGGGA+GGG | + | chr2_1:45941695-45941714 | Msa0209090:intron | 30.0% |
TAAAAATGGATGACAAAACC+AGG | - | chr2_1:45941973-45941992 | None:intergenic | 30.0% | |
TAAAGGTCATTAATCAACCA+AGG | + | chr2_1:45942024-45942043 | Msa0209090:intron | 30.0% | |
ACATGAAGTTCAACAACTTA+AGG | - | chr2_1:45942054-45942073 | None:intergenic | 30.0% | |
CTCATAAAAGCTATCATTTG+TGG | - | chr2_1:45942151-45942170 | None:intergenic | 30.0% | |
!!! | ATCAGCTAACATTTTCAAGT+TGG | - | chr2_1:45942179-45942198 | None:intergenic | 30.0% |
ACTTGAAAATGTTAGCTGAT+AGG | + | chr2_1:45942179-45942198 | Msa0209090:intron | 30.0% | |
ATAGCAAAGAATATAAACGG+TGG | + | chr2_1:45942296-45942315 | Msa0209090:intron | 30.0% | |
! | TACATTTTATGAGATTTGGC+TGG | + | chr2_1:45942368-45942387 | Msa0209090:intron | 30.0% |
TTTCTGTCTTTCTTAGAGAA+AGG | + | chr2_1:45942424-45942443 | Msa0209090:intron | 30.0% | |
! | TTTTATCTCATTCTTAGGTG+CGG | - | chr2_1:45942640-45942659 | None:intergenic | 30.0% |
ATATTATCAACTTCGGATAG+TGG | - | chr2_1:45942943-45942962 | None:intergenic | 30.0% | |
TACCATGAATTGAAAAACTG+TGG | - | chr2_1:45943028-45943047 | None:intergenic | 30.0% | |
!! | TGCATTTGATATTTTAAGCC+TGG | - | chr2_1:45943324-45943343 | None:intergenic | 30.0% |
TGCAAAAGTCATATTTACTC+AGG | + | chr2_1:45943340-45943359 | Msa0209090:CDS | 30.0% | |
!! | GATTATTTGGGATTTTAAGC+AGG | + | chr2_1:45943459-45943478 | Msa0209090:intron | 30.0% |
TTCCTCGTTAAATTTGGATT+AGG | - | chr2_1:45943579-45943598 | None:intergenic | 30.0% | |
ATATGATGAATCTTTGCAAG+TGG | + | chr2_1:45943611-45943630 | Msa0209090:intron | 30.0% | |
TATGATGAATCTTTGCAAGT+GGG | + | chr2_1:45943612-45943631 | Msa0209090:intron | 30.0% | |
TTTATCTATTATACTCCCTC+CGG | + | chr2_1:45943664-45943683 | Msa0209090:intron | 30.0% | |
ACCTAAAAAAGCCATAAAAC+AGG | + | chr2_1:45944268-45944287 | Msa0209090:intron | 30.0% | |
!! | ACCTGTTTTATGGCTTTTTT+AGG | - | chr2_1:45944272-45944291 | None:intergenic | 30.0% |
GTACTAGTTGATCATTTAGA+TGG | + | chr2_1:45944340-45944359 | Msa0209090:intron | 30.0% | |
! | TATTTTATAGCGACTTGTGT+TGG | + | chr2_1:45944420-45944439 | Msa0209090:intron | 30.0% |
AAAGATTCATCAAAGCTCTT+GGG | - | chr2_1:45944470-45944489 | None:intergenic | 30.0% | |
GATGATAAATGGAAAACTCT+TGG | - | chr2_1:45944559-45944578 | None:intergenic | 30.0% | |
GACAGTGAAATGATGATAAA+TGG | - | chr2_1:45944570-45944589 | None:intergenic | 30.0% | |
AAATACCCCTAATTGTCTTA+TGG | + | chr2_1:45944644-45944663 | Msa0209090:intron | 30.0% | |
TAGGTTCCATAAGACAATTA+GGG | - | chr2_1:45944653-45944672 | None:intergenic | 30.0% | |
! | AGGATTTTTACCTGTAAAGA+GGG | - | chr2_1:45945141-45945160 | None:intergenic | 30.0% |
! | AAGGATTTTTACCTGTAAAG+AGG | - | chr2_1:45945142-45945161 | None:intergenic | 30.0% |
GGAAATGCAAAAACATTGTT+AGG | + | chr2_1:45945427-45945446 | Msa0209090:intron | 30.0% | |
CATGATAATAAATGGGAATG+AGG | - | chr2_1:45945556-45945575 | None:intergenic | 30.0% | |
! | ACAAACATTCTCTTTTCTTC+TGG | + | chr2_1:45945629-45945648 | Msa0209090:CDS | 30.0% |
GTCAGACAACAATAAGATTT+GGG | - | chr2_1:45945784-45945803 | None:intergenic | 30.0% | |
AGTCAGACAACAATAAGATT+TGG | - | chr2_1:45945785-45945804 | None:intergenic | 30.0% | |
!! | AGCTTTTAGAGGAGTAATAT+TGG | - | chr2_1:45945843-45945862 | None:intergenic | 30.0% |
ATTGTTAAATGGAGCTTCAA+TGG | + | chr2_1:45945964-45945983 | Msa0209090:CDS | 30.0% | |
GTTTCATACCTGTACAAATT+TGG | - | chr2_1:45946026-45946045 | None:intergenic | 30.0% | |
! | TCAAAATTATGATGGAAGGA+TGG | - | chr2_1:45946048-45946067 | None:intergenic | 30.0% |
! | TCCTTCCATCATAATTTTGA+TGG | + | chr2_1:45946048-45946067 | Msa0209090:intron | 30.0% |
! | ACCATCAAAATTATGATGGA+AGG | - | chr2_1:45946052-45946071 | None:intergenic | 30.0% |
TGATAGGAAAGAAAAGATAC+GGG | - | chr2_1:45946076-45946095 | None:intergenic | 30.0% | |
ATTTCGAACTATATTCGAGT+TGG | - | chr2_1:45946121-45946140 | None:intergenic | 30.0% | |
AACTACATATAGCTCAAGTT+CGG | - | chr2_1:45946231-45946250 | None:intergenic | 30.0% | |
AAGTTAAAATAGTCCCACAT+CGG | + | chr2_1:45946644-45946663 | Msa0209090:intron | 30.0% | |
TAAGTTTCCACGATTAAGAT+GGG | + | chr2_1:45947170-45947189 | Msa0209090:intron | 30.0% | |
TTACTTTAGCATCCTAAACA+GGG | - | chr2_1:45947268-45947287 | None:intergenic | 30.0% | |
AGAAATGCAAATTCTACATC+CGG | + | chr2_1:45947326-45947345 | Msa0209090:CDS | 30.0% | |
ATCATAAATTCGCATTCATG+TGG | - | chr2_1:45947417-45947436 | None:intergenic | 30.0% | |
AAGCCTATCATTGAATATTG+TGG | + | chr2_1:45947545-45947564 | Msa0209090:CDS | 30.0% | |
TTGTTTATTCTTGCTGATGA+TGG | + | chr2_1:45947659-45947678 | Msa0209090:CDS | 30.0% | |
TGTTTATTCTTGCTGATGAT+GGG | + | chr2_1:45947660-45947679 | Msa0209090:CDS | 30.0% | |
GAATGAATAGTGCTTACAAT+AGG | - | chr2_1:45947689-45947708 | None:intergenic | 30.0% | |
TCATTATGGTGTCTATTTCA+AGG | + | chr2_1:45948112-45948131 | Msa0209090:CDS | 30.0% | |
CATTATGGTGTCTATTTCAA+GGG | + | chr2_1:45948113-45948132 | Msa0209090:CDS | 30.0% | |
TTTGATTATTAGGTAATGCC+TGG | + | chr2_1:45948362-45948381 | Msa0209090:intron | 30.0% | |
!! | CGTCTTTGGAATAAAAATTG+GGG | + | chr2_1:45948557-45948576 | Msa0209090:intron | 30.0% |
!! | ACATATCATGTTGTTTCGAT+AGG | + | chr2_1:45948801-45948820 | Msa0209090:intron | 30.0% |
CTCAATTTCTGTAAATCTTG+TGG | - | chr2_1:45948967-45948986 | None:intergenic | 30.0% | |
CACAAGATTTACAGAAATTG+AGG | + | chr2_1:45948965-45948984 | Msa0209090:CDS | 30.0% | |
TTCATCGTCATAGTATAGTT+TGG | + | chr2_1:45949066-45949085 | Msa0209090:intron | 30.0% | |
TTTATTGTAGAAGGTAAGAG+AGG | - | chr2_1:45949290-45949309 | None:intergenic | 30.0% | |
GGGTGCAACATTGAATTAAA+AGG | + | chr2_1:45939329-45939348 | Msa0209090:five_prime_UTR | 35.0% | |
GGATACAGAGATAGAAGATA+AGG | - | chr2_1:45939506-45939525 | None:intergenic | 35.0% | |
AGCATCTGATGAAACGAAAA+CGG | - | chr2_1:45939667-45939686 | None:intergenic | 35.0% | |
! | ATAGTGTTAAGAGAGCATAC+GGG | - | chr2_1:45939744-45939763 | None:intergenic | 35.0% |
! | GATAGTGTTAAGAGAGCATA+CGG | - | chr2_1:45939745-45939764 | None:intergenic | 35.0% |
GTTTGTTTGAAAATGGACAC+CGG | + | chr2_1:45939796-45939815 | Msa0209090:intron | 35.0% | |
! | ATACATTTCATCTGAAGCGT+CGG | + | chr2_1:45939898-45939917 | Msa0209090:intron | 35.0% |
!! | TGGTCTAATTGGTAATGGTT+TGG | + | chr2_1:45940026-45940045 | Msa0209090:intron | 35.0% |
AGCTATAAAAAAAGGCAGTC+TGG | + | chr2_1:45940195-45940214 | Msa0209090:intron | 35.0% | |
AGTGTTACATTGACGAATGT+TGG | + | chr2_1:45940565-45940584 | Msa0209090:CDS | 35.0% | |
TTACATTGACGAATGTTGGT+CGG | + | chr2_1:45940569-45940588 | Msa0209090:CDS | 35.0% | |
CTGTATAAGGATCCAATTAC+AGG | + | chr2_1:45940628-45940647 | Msa0209090:CDS | 35.0% | |
AAATCAGCAAAGCCTGTAAT+TGG | - | chr2_1:45940643-45940662 | None:intergenic | 35.0% | |
! | GGTTTGAGACTGAAAATTTC+TGG | - | chr2_1:45940666-45940685 | None:intergenic | 35.0% |
AAATTCAAGCAATTCTGTGC+AGG | - | chr2_1:45940926-45940945 | None:intergenic | 35.0% | |
TGAATGACACGGTGATAATA+TGG | + | chr2_1:45940963-45940982 | Msa0209090:CDS | 35.0% | |
! | CTCAACCTATTCTTTTTCCA+GGG | + | chr2_1:45941183-45941202 | Msa0209090:intron | 35.0% |
!! | TTGACATGATTGAGTTTTGG+TGG | + | chr2_1:45941206-45941225 | Msa0209090:intron | 35.0% |
!! | TGACATGATTGAGTTTTGGT+GGG | + | chr2_1:45941207-45941226 | Msa0209090:intron | 35.0% |
TAGATAAAACAGAGGGAAGT+AGG | + | chr2_1:45941252-45941271 | Msa0209090:intron | 35.0% | |
GTCACACATTCGATAAGATT+GGG | - | chr2_1:45941334-45941353 | None:intergenic | 35.0% | |
GATGCAACTAGTTATAAGGA+AGG | + | chr2_1:45941386-45941405 | Msa0209090:intron | 35.0% | |
GAGGATACAATCTGCAAAAA+TGG | + | chr2_1:45941446-45941465 | Msa0209090:intron | 35.0% | |
CAAAAATGGAAATGGAGATG+AGG | + | chr2_1:45941460-45941479 | Msa0209090:intron | 35.0% | |
GAAATGAGAGCTGAAACTAA+CGG | - | chr2_1:45941526-45941545 | None:intergenic | 35.0% | |
AGAAGTCTAACAGAAAGGAA+GGG | - | chr2_1:45941552-45941571 | None:intergenic | 35.0% | |
AAGAAGTCTAACAGAAAGGA+AGG | - | chr2_1:45941553-45941572 | None:intergenic | 35.0% | |
TGTTAGACTTCTTATGATGG+CGG | + | chr2_1:45941560-45941579 | Msa0209090:intron | 35.0% | |
GCTAGAATCGACACTAAAAA+TGG | - | chr2_1:45941987-45942006 | None:intergenic | 35.0% | |
TGAAGTTCAACAACTTAAGG+TGG | - | chr2_1:45942051-45942070 | None:intergenic | 35.0% | |
!!! | TCAGAATTTTTTTTGGCAGC+TGG | + | chr2_1:45942086-45942105 | Msa0209090:intron | 35.0% |
! | AATTTATACTCTGGTAGTGC+AGG | - | chr2_1:45942205-45942224 | None:intergenic | 35.0% |
! | GTGGCTTGTGTATTGAAATT+TGG | + | chr2_1:45942232-45942251 | Msa0209090:intron | 35.0% |
TTGCTATCGTCTATATTCTC+TGG | - | chr2_1:45942283-45942302 | None:intergenic | 35.0% | |
CATAAAGTTAGGGAAAACTG+CGG | - | chr2_1:45942329-45942348 | None:intergenic | 35.0% | |
AGCAAAGCAGTTTAGTGTAA+TGG | + | chr2_1:45942562-45942581 | Msa0209090:intron | 35.0% | |
AGGATAGTGAAAATGACAAC+AGG | - | chr2_1:45942785-45942804 | None:intergenic | 35.0% | |
!! | TGCCACAGTTTTTCAATTCA+TGG | + | chr2_1:45943023-45943042 | Msa0209090:intron | 35.0% |
!! | TGCTACTTCTGTTAACTTGT+AGG | + | chr2_1:45943135-45943154 | Msa0209090:intron | 35.0% |
ACCACAGATGTACAATTCAT+TGG | - | chr2_1:45943224-45943243 | None:intergenic | 35.0% | |
CTCCTAATCCAAATTTAACG+AGG | + | chr2_1:45943574-45943593 | Msa0209090:intron | 35.0% | |
TTCTTATATATAGGACCGGA+GGG | - | chr2_1:45943682-45943701 | None:intergenic | 35.0% | |
TTTCTTATATATAGGACCGG+AGG | - | chr2_1:45943683-45943702 | None:intergenic | 35.0% | |
ACACTAATGAGTGAGTGTAT+TGG | + | chr2_1:45943881-45943900 | Msa0209090:intron | 35.0% | |
TTCTTATATTAAGGACCGGA+GGG | + | chr2_1:45943926-45943945 | Msa0209090:intron | 35.0% | |
! | CTTTTATCCGAACACACTTA+AGG | + | chr2_1:45944010-45944029 | Msa0209090:intron | 35.0% |
CATAAGTCACTACTAGTGTA+TGG | + | chr2_1:45944111-45944130 | Msa0209090:intron | 35.0% | |
TGTCACAAAAATGAGTCAAC+AGG | + | chr2_1:45944154-45944173 | Msa0209090:intron | 35.0% | |
CAAAGATTCATCAAAGCTCT+TGG | - | chr2_1:45944471-45944490 | None:intergenic | 35.0% | |
AATGGAAAACTCTTGGCATT+TGG | - | chr2_1:45944552-45944571 | None:intergenic | 35.0% | |
AGGTTCCATAAGACAATTAG+GGG | - | chr2_1:45944652-45944671 | None:intergenic | 35.0% | |
GTAGGTTCCATAAGACAATT+AGG | - | chr2_1:45944654-45944673 | None:intergenic | 35.0% | |
GCAGGGAAGAATAAAAAGAA+AGG | - | chr2_1:45944924-45944943 | None:intergenic | 35.0% | |
CAGCTATTATTTCCGTTGTT+AGG | + | chr2_1:45944999-45945018 | Msa0209090:intron | 35.0% | |
! | TTTTTACCTGTAAAGAGGGA+GGG | - | chr2_1:45945137-45945156 | None:intergenic | 35.0% |
! | ATTTTTACCTGTAAAGAGGG+AGG | - | chr2_1:45945138-45945157 | None:intergenic | 35.0% |
AACTATTGCCATAGGAGATT+GGG | - | chr2_1:45945276-45945295 | None:intergenic | 35.0% | |
TAACTATTGCCATAGGAGAT+TGG | - | chr2_1:45945277-45945296 | None:intergenic | 35.0% | |
CCAAAAAATCACACCATGAA+AGG | - | chr2_1:45945346-45945365 | None:intergenic | 35.0% | |
!!! | CCTTTCATGGTGTGATTTTT+TGG | + | chr2_1:45945343-45945362 | Msa0209090:CDS | 35.0% |
!!! | TGTGATTTTTTGGAGAGAGT+TGG | + | chr2_1:45945353-45945372 | Msa0209090:CDS | 35.0% |
CATGAGAATGTTGAAAGGAT+CGG | - | chr2_1:45945463-45945482 | None:intergenic | 35.0% | |
CAACACATGAGAATGTTGAA+AGG | - | chr2_1:45945468-45945487 | None:intergenic | 35.0% | |
TCATGTAAAATACAGAGGCA+AGG | + | chr2_1:45945571-45945590 | Msa0209090:intron | 35.0% | |
CTTATTGTTGTCTGACTTTG+TGG | + | chr2_1:45945788-45945807 | Msa0209090:intron | 35.0% | |
ATCATCCATCCAAGATTAGT+GGG | - | chr2_1:45945920-45945939 | None:intergenic | 35.0% | |
ACTAATCTTGGATGGATGAT+GGG | + | chr2_1:45945920-45945939 | Msa0209090:CDS | 35.0% | |
AATGATGCATATACTAGCCA+TGG | - | chr2_1:45945947-45945966 | None:intergenic | 35.0% | |
!! | GCTTCAATGGCTTTGTATAA+TGG | + | chr2_1:45945977-45945996 | Msa0209090:CDS | 35.0% |
GGGAACCATCAAAATTATGA+TGG | - | chr2_1:45946056-45946075 | None:intergenic | 35.0% | |
!! | GAACTATATTCGAGTTGGTT+CGG | - | chr2_1:45946116-45946135 | None:intergenic | 35.0% |
GACAATTAATTCGTCGAACT+TGG | + | chr2_1:45946148-45946167 | Msa0209090:intron | 35.0% | |
! | TATATGTAGTTCGACTCGAT+TGG | + | chr2_1:45946240-45946259 | Msa0209090:intron | 35.0% |
!! | ATGCACTAATTTGTTGCTCT+AGG | + | chr2_1:45946430-45946449 | Msa0209090:intron | 35.0% |
!! | TGCACTAATTTGTTGCTCTA+GGG | + | chr2_1:45946431-45946450 | Msa0209090:intron | 35.0% |
CATCTTAATCGTGGAAACTT+AGG | - | chr2_1:45947171-45947190 | None:intergenic | 35.0% | |
CTAAGTTTCCACGATTAAGA+TGG | + | chr2_1:45947169-45947188 | Msa0209090:intron | 35.0% | |
! | GTTACTTTAGCATCCTAAAC+AGG | - | chr2_1:45947269-45947288 | None:intergenic | 35.0% |
GATGCTAAAGTAACAATGCT+TGG | + | chr2_1:45947275-45947294 | Msa0209090:CDS | 35.0% | |
ATGATTATGCAGCATCTGAT+TGG | + | chr2_1:45947432-45947451 | Msa0209090:intron | 35.0% | |
CCACCACAATATTCAATGAT+AGG | - | chr2_1:45947551-45947570 | None:intergenic | 35.0% | |
CCTATCATTGAATATTGTGG+TGG | + | chr2_1:45947548-45947567 | Msa0209090:CDS | 35.0% | |
ATGCAATCAAGAACTGCATA+TGG | - | chr2_1:45947756-45947775 | None:intergenic | 35.0% | |
GCAGATGATACAATGAATCT+TGG | + | chr2_1:45948295-45948314 | Msa0209090:CDS | 35.0% | |
GATGATACAATGAATCTTGG+AGG | + | chr2_1:45948298-45948317 | Msa0209090:CDS | 35.0% | |
AATGAATCTTGGAGGAATCA+AGG | + | chr2_1:45948306-45948325 | Msa0209090:CDS | 35.0% | |
AACAAAGTTAAGGACAACAG+GGG | - | chr2_1:45948405-45948424 | None:intergenic | 35.0% | |
CAACAAAGTTAAGGACAACA+GGG | - | chr2_1:45948406-45948425 | None:intergenic | 35.0% | |
ACAACAAAGTTAAGGACAAC+AGG | - | chr2_1:45948407-45948426 | None:intergenic | 35.0% | |
TGGTAGAACAATGTAAGGAT+AGG | + | chr2_1:45948454-45948473 | Msa0209090:intron | 35.0% | |
! | ATATGCCAATGAAGTGTTCA+TGG | - | chr2_1:45948481-45948500 | None:intergenic | 35.0% |
! | GTTTGTATTGATGCATCCTA+TGG | - | chr2_1:45948533-45948552 | None:intergenic | 35.0% |
CAATACAAACTGTTCGTCTT+TGG | + | chr2_1:45948543-45948562 | Msa0209090:intron | 35.0% | |
GAAATTGAACGCATATGCAA+CGG | + | chr2_1:45948835-45948854 | Msa0209090:CDS | 35.0% | |
CGGAGTAGATAGTAATATTG+TGG | + | chr2_1:45948855-45948874 | Msa0209090:CDS | 35.0% | |
AAATACATGCTCGTTTGTGT+AGG | + | chr2_1:45949095-45949114 | Msa0209090:intron | 35.0% | |
CTCAAACAAGGTTATGAGAA+GGG | + | chr2_1:45949158-45949177 | Msa0209090:CDS | 35.0% | |
GTATCCGATATTGAATCCCT+TGG | + | chr2_1:45939520-45939539 | Msa0209090:CDS | 40.0% | |
GAAACGAAAACGGAAGTTCA+GGG | - | chr2_1:45939657-45939676 | None:intergenic | 40.0% | |
TGAAACGAAAACGGAAGTTC+AGG | - | chr2_1:45939658-45939677 | None:intergenic | 40.0% | |
TCGGTGACTATAATTGACGA+TGG | + | chr2_1:45940006-45940025 | Msa0209090:intron | 40.0% | |
GACGATGGTCTAATTGGTAA+TGG | + | chr2_1:45940021-45940040 | Msa0209090:intron | 40.0% | |
AAATCTCGTCGTTGATGTGA+GGG | + | chr2_1:45940073-45940092 | Msa0209090:intron | 40.0% | |
AAACAGTGACCTTTCAGTCA+CGG | - | chr2_1:45940296-45940315 | None:intergenic | 40.0% | |
! | AAGGTCACTGTTTCAAGTCT+TGG | + | chr2_1:45940303-45940322 | Msa0209090:intron | 40.0% |
AAGAGGGGTAAAGAGTTTCT+GGG | + | chr2_1:45940601-45940620 | Msa0209090:CDS | 40.0% | |
! | GTTTCTGGGTTCACTGTATA+AGG | + | chr2_1:45940615-45940634 | Msa0209090:CDS | 40.0% |
! | ATTTTCAGTCTCAAACCCTG+AGG | + | chr2_1:45940669-45940688 | Msa0209090:CDS | 40.0% |
ATTATCTTGGATGGACCTCA+GGG | - | chr2_1:45940687-45940706 | None:intergenic | 40.0% | |
GGTTTATTGGAAAACTGTGC+TGG | + | chr2_1:45940784-45940803 | Msa0209090:intron | 40.0% | |
TTGTCACGTAAGATGCATTC+AGG | - | chr2_1:45940839-45940858 | None:intergenic | 40.0% | |
! | CAAGTGTCATCCTTTGAAGA+GGG | - | chr2_1:45941012-45941031 | None:intergenic | 40.0% |
! | TCAAGTGTCATCCTTTGAAG+AGG | - | chr2_1:45941013-45941032 | None:intergenic | 40.0% |
TCTTCAAAGGATGACACTTG+AGG | + | chr2_1:45941012-45941031 | Msa0209090:CDS | 40.0% | |
AGTTTCTCTCTGCTATAGCT+AGG | + | chr2_1:45941146-45941165 | Msa0209090:intron | 40.0% | |
! | GAAAAAGAATAGGTTGAGGC+AGG | - | chr2_1:45941181-45941200 | None:intergenic | 40.0% |
CCTGGAAAAAGAATAGGTTG+AGG | - | chr2_1:45941185-45941204 | None:intergenic | 40.0% | |
! | CCTCAACCTATTCTTTTTCC+AGG | + | chr2_1:45941182-45941201 | Msa0209090:intron | 40.0% |
GTCAACCCTGGAAAAAGAAT+AGG | - | chr2_1:45941191-45941210 | None:intergenic | 40.0% | |
AAACTCAATCATGTCAACCC+TGG | - | chr2_1:45941203-45941222 | None:intergenic | 40.0% | |
! | GGGTTGACATGATTGAGTTT+TGG | + | chr2_1:45941203-45941222 | Msa0209090:intron | 40.0% |
TAAAACAGAGGGAAGTAGGA+TGG | + | chr2_1:45941256-45941275 | Msa0209090:intron | 40.0% | |
GGTCACACATTCGATAAGAT+TGG | - | chr2_1:45941335-45941354 | None:intergenic | 40.0% | |
!! | ACTTCTTATGATGGCGGTTA+TGG | + | chr2_1:45941566-45941585 | Msa0209090:intron | 40.0% |
!! | CTTCTTATGATGGCGGTTAT+GGG | + | chr2_1:45941567-45941586 | Msa0209090:intron | 40.0% |
AGACCAAGCTCTCTAATTCT+TGG | + | chr2_1:45941720-45941739 | Msa0209090:intron | 40.0% | |
CATCCAAGAATTAGAGAGCT+TGG | - | chr2_1:45941726-45941745 | None:intergenic | 40.0% | |
CAAGCTCTCTAATTCTTGGA+TGG | + | chr2_1:45941724-45941743 | Msa0209090:intron | 40.0% | |
TCTCTAATTCTTGGATGGAG+AGG | + | chr2_1:45941729-45941748 | Msa0209090:intron | 40.0% | |
TCGAAGAAATTCGAGAGTCT+TGG | - | chr2_1:45941755-45941774 | None:intergenic | 40.0% | |
! | GCAATGGAGAATGAAAGTGT+TGG | - | chr2_1:45941924-45941943 | None:intergenic | 40.0% |
!!! | TTTTTTTTGGCAGCTGGCAA+CGG | + | chr2_1:45942092-45942111 | Msa0209090:intron | 40.0% |
TTTATGAGATTTGGCTGGCA+AGG | + | chr2_1:45942373-45942392 | Msa0209090:intron | 40.0% | |
AAAATACCGGAGCAGCATTT+GGG | + | chr2_1:45942733-45942752 | Msa0209090:intron | 40.0% | |
GGAGTGAGACAAAGTGTAAA+AGG | - | chr2_1:45942764-45942783 | None:intergenic | 40.0% | |
!! | GTCATTTTCACTATCCTCAC+TGG | + | chr2_1:45942788-45942807 | Msa0209090:intron | 40.0% |
AAAATGTTGGAAGAGCCAGT+GGG | - | chr2_1:45942901-45942920 | None:intergenic | 40.0% | |
AAAAATGTTGGAAGAGCCAG+TGG | - | chr2_1:45942902-45942921 | None:intergenic | 40.0% | |
! | TGGCTCTTCCAACATTTTTG+AGG | + | chr2_1:45942903-45942922 | Msa0209090:intron | 40.0% |
!!! | TCCAACATTTTTGAGGTCCA+CGG | + | chr2_1:45942910-45942929 | Msa0209090:intron | 40.0% |
GCCAATGAATTGTACATCTG+TGG | + | chr2_1:45943220-45943239 | Msa0209090:CDS | 40.0% | |
AGTATCTTAGGAGATCTCTG+CGG | - | chr2_1:45943645-45943664 | None:intergenic | 40.0% | |
CTTCTTATATTAAGGACCGG+AGG | + | chr2_1:45943925-45943944 | Msa0209090:intron | 40.0% | |
! | ATTTTGCATCTTACTCCCTC+CGG | - | chr2_1:45943944-45943963 | None:intergenic | 40.0% |
!!! | GTATAATGCAGTGCCACTTT+TGG | + | chr2_1:45944041-45944060 | Msa0209090:intron | 40.0% |
GTCAGTTATTACTTACGCCA+GGG | - | chr2_1:45944092-45944111 | None:intergenic | 40.0% | |
TGTCAGTTATTACTTACGCC+AGG | - | chr2_1:45944093-45944112 | None:intergenic | 40.0% | |
TAGGTGCTAGCATAACATTG+AGG | - | chr2_1:45944253-45944272 | None:intergenic | 40.0% | |
CACAAGATGAATCATGCTAG+TGG | + | chr2_1:45944375-45944394 | Msa0209090:intron | 40.0% | |
ATCAAAGCTCTTGGGACAAA+GGG | - | chr2_1:45944462-45944481 | None:intergenic | 40.0% | |
ACACGATTGACACCTAACAA+CGG | - | chr2_1:45945014-45945033 | None:intergenic | 40.0% | |
TCCACAACTCTACTGCATTT+GGG | - | chr2_1:45945251-45945270 | None:intergenic | 40.0% | |
ATCCACAACTCTACTGCATT+TGG | - | chr2_1:45945252-45945271 | None:intergenic | 40.0% | |
GTTGGGATAACTATTGCCAT+AGG | - | chr2_1:45945284-45945303 | None:intergenic | 40.0% | |
GCAATAGTTATCCCAACTAG+AGG | + | chr2_1:45945287-45945306 | Msa0209090:CDS | 40.0% | |
!!! | CTCTTTTCTTCTGGAACAAC+AGG | + | chr2_1:45945638-45945657 | Msa0209090:CDS | 40.0% |
AGTGATTGAAGTCTCAAGAC+TGG | - | chr2_1:45945749-45945768 | None:intergenic | 40.0% | |
GTTGTCTGACTTTGTGGTAT+AGG | + | chr2_1:45945794-45945813 | Msa0209090:intron | 40.0% | |
GTGATCCAAAAGCAATTCCA+TGG | + | chr2_1:45945816-45945835 | Msa0209090:CDS | 40.0% | |
! | TTGGTCCATGGAATTGCTTT+TGG | - | chr2_1:45945824-45945843 | None:intergenic | 40.0% |
AGAGGAGTAATATTGGTCCA+TGG | - | chr2_1:45945836-45945855 | None:intergenic | 40.0% | |
! | GTAAAGGTGATGTAGTTTGC+TGG | + | chr2_1:45945894-45945913 | Msa0209090:CDS | 40.0% |
CATCATCCATCCAAGATTAG+TGG | - | chr2_1:45945921-45945940 | None:intergenic | 40.0% | |
CACTAATCTTGGATGGATGA+TGG | + | chr2_1:45945919-45945938 | Msa0209090:CDS | 40.0% | |
CTAATCTTGGATGGATGATG+GGG | + | chr2_1:45945921-45945940 | Msa0209090:CDS | 40.0% | |
!! | TTGTATAATGGATCCCCACT+TGG | + | chr2_1:45945989-45946008 | Msa0209090:CDS | 40.0% |
CTGTACAAATTTGGCAAAGC+CGG | - | chr2_1:45946017-45946036 | None:intergenic | 40.0% | |
TTCTTTCCTATCAATAGGGC+TGG | + | chr2_1:45946083-45946102 | Msa0209090:intron | 40.0% | |
CAACTCAAGTTCAGCTCATT+TGG | - | chr2_1:45946182-45946201 | None:intergenic | 40.0% | |
TTAAAATAGTCCCACATCGG+TGG | + | chr2_1:45946647-45946666 | Msa0209090:intron | 40.0% | |
TAAAATAGTCCCACATCGGT+GGG | + | chr2_1:45946648-45946667 | Msa0209090:intron | 40.0% | |
!! | TGTTTTAAACCCACCGATGT+GGG | - | chr2_1:45946660-45946679 | None:intergenic | 40.0% |
!!! | TTGTTTTAAACCCACCGATG+TGG | - | chr2_1:45946661-45946680 | None:intergenic | 40.0% |
! | CCTTTTGTTAAGCTCGAGTT+CGG | - | chr2_1:45946936-45946955 | None:intergenic | 40.0% |
CGACTCGATAAGAATTGGTT+CGG | - | chr2_1:45946988-45947007 | None:intergenic | 40.0% | |
!!! | AGTGCTATTTTGCCCTGTTT+AGG | + | chr2_1:45947253-45947272 | Msa0209090:intron | 40.0% |
! | GTGTGATTCCAAGTCTTGTA+CGG | + | chr2_1:45947297-45947316 | Msa0209090:CDS | 40.0% |
ATTCTACATCCGGCTATGAT+TGG | + | chr2_1:45947336-45947355 | Msa0209090:CDS | 40.0% | |
GTTGGTTAAATAGTGCTCAC+CGG | - | chr2_1:45947370-45947389 | None:intergenic | 40.0% | |
TGCTAGTGTATTAGGGTAGT+TGG | - | chr2_1:45947388-45947407 | None:intergenic | 40.0% | |
GTACGTCTGCTAGTGTATTA+GGG | - | chr2_1:45947395-45947414 | None:intergenic | 40.0% | |
CGAACGTAGATGAATACCTT+TGG | + | chr2_1:45947501-45947520 | Msa0209090:CDS | 40.0% | |
AGATGAATACCTTTGGCTGA+TGG | + | chr2_1:45947508-45947527 | Msa0209090:CDS | 40.0% | |
GATGAATACCTTTGGCTGAT+GGG | + | chr2_1:45947509-45947528 | Msa0209090:CDS | 40.0% | |
TATTGTGGTGGTACAGAGAT+TGG | + | chr2_1:45947560-45947579 | Msa0209090:CDS | 40.0% | |
ATTGTGGTGGTACAGAGATT+GGG | + | chr2_1:45947561-45947580 | Msa0209090:CDS | 40.0% | |
! | GGAACATTTTGTGGCTGTAA+TGG | - | chr2_1:45948026-45948045 | None:intergenic | 40.0% |
TTACAGCCACAAAATGTTCC+AGG | + | chr2_1:45948026-45948045 | Msa0209090:intron | 40.0% | |
! | CCTATTCCTGGAACATTTTG+TGG | - | chr2_1:45948035-45948054 | None:intergenic | 40.0% |
CCACAAAATGTTCCAGGAAT+AGG | + | chr2_1:45948032-45948051 | Msa0209090:CDS | 40.0% | |
CTGCTGAATGCTGATCATTA+TGG | + | chr2_1:45948098-45948117 | Msa0209090:CDS | 40.0% | |
AGTTGAGTTTCTCTCTAGTC+AGG | + | chr2_1:45948207-45948226 | Msa0209090:intron | 40.0% | |
! | AGTCAGGTTTTACGAAGACA+TGG | + | chr2_1:45948223-45948242 | Msa0209090:intron | 40.0% |
GTATTTGAGCGTACTTCTAG+AGG | + | chr2_1:45948250-45948269 | Msa0209090:CDS | 40.0% | |
AGAGGATACTATCATGCACA+TGG | + | chr2_1:45948268-45948287 | Msa0209090:CDS | 40.0% | |
TAGGTAATGCCTGGAGAATT+TGG | + | chr2_1:45948371-45948390 | Msa0209090:intron | 40.0% | |
AATGCCTGGAGAATTTGGTA+TGG | + | chr2_1:45948376-45948395 | Msa0209090:intron | 40.0% | |
TAGGACCATGAACACTTCAT+TGG | + | chr2_1:45948473-45948492 | Msa0209090:intron | 40.0% | |
! | GTTGTTTCGATAGGTGAGTT+CGG | + | chr2_1:45948810-45948829 | Msa0209090:intron | 40.0% |
! | CCTTCTCATAACCTTGTTTG+AGG | - | chr2_1:45949160-45949179 | None:intergenic | 40.0% |
CCTCAAACAAGGTTATGAGA+AGG | + | chr2_1:45949157-45949176 | Msa0209090:CDS | 40.0% | |
! | AGGTTATGAGAAGGGTTTTG+CGG | + | chr2_1:45949166-45949185 | Msa0209090:CDS | 40.0% |
CTATTAATTCCGTGAGACGC+AGG | - | chr2_1:45939576-45939595 | None:intergenic | 45.0% | |
! | TGTTAAGAGAGCATACGGGT+CGG | - | chr2_1:45939740-45939759 | None:intergenic | 45.0% |
CTACATGTCATTGTCGTGTC+CGG | - | chr2_1:45939818-45939837 | None:intergenic | 45.0% | |
GTTTGGCCAATGCTGCATAA+GGG | + | chr2_1:45940043-45940062 | Msa0209090:intron | 45.0% | |
AACTCACCCTTATGCAGCAT+TGG | - | chr2_1:45940052-45940071 | None:intergenic | 45.0% | |
CAAATCTCGTCGTTGATGTG+AGG | + | chr2_1:45940072-45940091 | Msa0209090:intron | 45.0% | |
GGGAACTCGAAAAAGCTACA+AGG | - | chr2_1:45940135-45940154 | None:intergenic | 45.0% | |
TCCTGGATACACCAAATGGT+GGG | - | chr2_1:45940261-45940280 | None:intergenic | 45.0% | |
CAAGTCCTGGATACACCAAA+TGG | - | chr2_1:45940265-45940284 | None:intergenic | 45.0% | |
GAAGAGGGGTAAAGAGTTTC+TGG | + | chr2_1:45940600-45940619 | Msa0209090:CDS | 45.0% | |
GATTATCTTGGATGGACCTC+AGG | - | chr2_1:45940688-45940707 | None:intergenic | 45.0% | |
TGCATCTTACGTGACAATCC+TGG | + | chr2_1:45940842-45940861 | Msa0209090:CDS | 45.0% | |
TGGCGTGATGAACTACAAGA+TGG | + | chr2_1:45940983-45941002 | Msa0209090:CDS | 45.0% | |
AAGATGGTCTCCCTCTTCAA+AGG | + | chr2_1:45940999-45941018 | Msa0209090:CDS | 45.0% | |
ACTTGAGGAATTGCGTCAAG+AGG | + | chr2_1:45941027-45941046 | Msa0209090:CDS | 45.0% | |
AGGAATTGCGTCAAGAGGTT+TGG | + | chr2_1:45941032-45941051 | Msa0209090:CDS | 45.0% | |
TAATCCTGCATAACCTCCCT+CGG | - | chr2_1:45941293-45941312 | None:intergenic | 45.0% | |
GAGATGAGGAAACGAGAGTT+GGG | + | chr2_1:45941474-45941493 | Msa0209090:intron | 45.0% | |
CCTGTTAGAATGGTGAGCAA+TGG | - | chr2_1:45941940-45941959 | None:intergenic | 45.0% | |
CCATTGCTCACCATTCTAAC+AGG | + | chr2_1:45941937-45941956 | Msa0209090:intron | 45.0% | |
AAGCAGAGCTCCTGTTAGAA+TGG | - | chr2_1:45941950-45941969 | None:intergenic | 45.0% | |
CAACAACTTAAGGTGGTCCT+TGG | - | chr2_1:45942044-45942063 | None:intergenic | 45.0% | |
GAAACTTGCACTCTGTCCTA+TGG | - | chr2_1:45942408-45942427 | None:intergenic | 45.0% | |
ATCCCACATCTAGATGGTAC+AGG | + | chr2_1:45942530-45942549 | Msa0209090:intron | 45.0% | |
GTCCTGTACCATCTAGATGT+GGG | - | chr2_1:45942535-45942554 | None:intergenic | 45.0% | |
TGTCCTGTACCATCTAGATG+TGG | - | chr2_1:45942536-45942555 | None:intergenic | 45.0% | |
!! | GTTTTTGACTGGGACATGCT+AGG | + | chr2_1:45942693-45942712 | Msa0209090:intron | 45.0% |
CAAAATACCGGAGCAGCATT+TGG | + | chr2_1:45942732-45942751 | Msa0209090:intron | 45.0% | |
TGCGTATGCTCTTGAATCAC+TGG | + | chr2_1:45943163-45943182 | Msa0209090:CDS | 45.0% | |
GCGTATGCTCTTGAATCACT+GGG | + | chr2_1:45943164-45943183 | Msa0209090:CDS | 45.0% | |
TACCTAGCTATCGTTCTTGC+AGG | + | chr2_1:45943248-45943267 | Msa0209090:CDS | 45.0% | |
AACCTGCAAGAACGATAGCT+AGG | - | chr2_1:45943253-45943272 | None:intergenic | 45.0% | |
TGGCGCAAAACTATCAGCTA+TGG | - | chr2_1:45943288-45943307 | None:intergenic | 45.0% | |
! | AGCCTGGTTGATATTTCACG+TGG | - | chr2_1:45943308-45943327 | None:intergenic | 45.0% |
!!! | TGCCACTTTTGGACTAGAGA+TGG | + | chr2_1:45944052-45944071 | Msa0209090:intron | 45.0% |
!!! | GCCACTTTTGGACTAGAGAT+GGG | + | chr2_1:45944053-45944072 | Msa0209090:intron | 45.0% |
ACCCATCTCTAGTCCAAAAG+TGG | - | chr2_1:45944057-45944076 | None:intergenic | 45.0% | |
CATCAAAGCTCTTGGGACAA+AGG | - | chr2_1:45944463-45944482 | None:intergenic | 45.0% | |
AGATCCTGACAAGTAGCAGT+GGG | - | chr2_1:45945094-45945113 | None:intergenic | 45.0% | |
TGTCAGGATCTCATACTTCG+TGG | + | chr2_1:45945103-45945122 | Msa0209090:intron | 45.0% | |
ATAAAGCCCTCCCTCTTTAC+AGG | + | chr2_1:45945128-45945147 | Msa0209090:CDS | 45.0% | |
CAGGAGACAACTCAAGTACA+GGG | - | chr2_1:45945185-45945204 | None:intergenic | 45.0% | |
ACAGGAGACAACTCAAGTAC+AGG | - | chr2_1:45945186-45945205 | None:intergenic | 45.0% | |
TCCCAAATGCAGTAGAGTTG+TGG | + | chr2_1:45945247-45945266 | Msa0209090:intron | 45.0% | |
TTCAGCATGCAACTGCGTAA+CGG | + | chr2_1:45945317-45945336 | Msa0209090:CDS | 45.0% | |
GAGAATGTTGAAAGGATCGG+AGG | - | chr2_1:45945460-45945479 | None:intergenic | 45.0% | |
CGGCTTTGCCAAATTTGTAC+AGG | + | chr2_1:45946015-45946034 | Msa0209090:CDS | 45.0% | |
TCATTGCCAGCCCTATTGAT+AGG | - | chr2_1:45946092-45946111 | None:intergenic | 45.0% | |
! | GACTCGATTGGTTCATGAGT+TGG | + | chr2_1:45946252-45946271 | Msa0209090:intron | 45.0% |
! | AAAGACGGAAGTGTGTGCAA+TGG | + | chr2_1:45946704-45946723 | Msa0209090:intron | 45.0% |
! | CTCAACAGTGAAGCGCTATT+TGG | + | chr2_1:45946745-45946764 | Msa0209090:intron | 45.0% |
CCGAACTCGAGCTTAACAAA+AGG | + | chr2_1:45946933-45946952 | Msa0209090:intron | 45.0% | |
! | CGACTCGACTCGATAAGAAT+TGG | - | chr2_1:45946993-45947012 | None:intergenic | 45.0% |
! | CTAATGTTGATAGGTAGGGC+TGG | - | chr2_1:45947050-45947069 | None:intergenic | 45.0% |
TTCCACGATTAAGATGGGCA+CGG | + | chr2_1:45947175-45947194 | Msa0209090:intron | 45.0% | |
GATAGCAGACCAATCATAGC+CGG | - | chr2_1:45947348-45947367 | None:intergenic | 45.0% | |
!! | GCTATGATTGGTCTGCTATC+CGG | + | chr2_1:45947348-45947367 | Msa0209090:CDS | 45.0% |
GGTACGTCTGCTAGTGTATT+AGG | - | chr2_1:45947396-45947415 | None:intergenic | 45.0% | |
CAGTGGATGCAAAGCAACTA+CGG | - | chr2_1:45947472-45947491 | None:intergenic | 45.0% | |
TTGTGGTGGTACAGAGATTG+GGG | + | chr2_1:45947562-45947581 | Msa0209090:CDS | 45.0% | |
ATTACTGCAGGCTCAGTCAT+TGG | + | chr2_1:45947604-45947623 | Msa0209090:CDS | 45.0% | |
!!! | ATTGGCTGCTTTTAGCACAC+CGG | + | chr2_1:45947622-45947641 | Msa0209090:CDS | 45.0% |
AACAAATTGCAGCACATCGC+CGG | - | chr2_1:45947644-45947663 | None:intergenic | 45.0% | |
AGAGCTAACTCACCTATTCC+TGG | - | chr2_1:45948047-45948066 | None:intergenic | 45.0% | |
! | GGAATAGGTGAGTTAGCTCT+TGG | + | chr2_1:45948047-45948066 | Msa0209090:CDS | 45.0% |
CTCTTGGATCCCTTATGCTT+GGG | + | chr2_1:45948063-45948082 | Msa0209090:CDS | 45.0% | |
TCTTGGATCCCTTATGCTTG+GGG | + | chr2_1:45948064-45948083 | Msa0209090:CDS | 45.0% | |
GTTTGATGCCCCAAGCATAA+GGG | - | chr2_1:45948075-45948094 | None:intergenic | 45.0% | |
TGTTTGATGCCCCAAGCATA+AGG | - | chr2_1:45948076-45948095 | None:intergenic | 45.0% | |
ATTTCAAGGGAATGCCTCTC+TGG | + | chr2_1:45948126-45948145 | Msa0209090:CDS | 45.0% | |
!! | AATGCCTCTCTGGAATGGAA+AGG | + | chr2_1:45948136-45948155 | Msa0209090:CDS | 45.0% |
TCTACCTTTCCATTCCAGAG+AGG | - | chr2_1:45948143-45948162 | None:intergenic | 45.0% | |
GAAGCCATACCAAATTCTCC+AGG | - | chr2_1:45948383-45948402 | None:intergenic | 45.0% | |
ATTGTGGAAACAGCTGCCAT+CGG | + | chr2_1:45948871-45948890 | Msa0209090:CDS | 45.0% | |
GTGGTCTCTCGCAATTCCAA+GGG | - | chr2_1:45939539-45939558 | None:intergenic | 50.0% | |
TTAATTCCGTGAGACGCAGG+TGG | - | chr2_1:45939573-45939592 | None:intergenic | 50.0% | |
AAAACGGAAGTTCAGGGCTG+AGG | - | chr2_1:45939651-45939670 | None:intergenic | 50.0% | |
! | GTTAAGAGAGCATACGGGTC+GGG | - | chr2_1:45939739-45939758 | None:intergenic | 50.0% |
GGTTTGGCCAATGCTGCATA+AGG | + | chr2_1:45940042-45940061 | Msa0209090:intron | 50.0% | |
!! | TCCCACCATTTGGTGTATCC+AGG | + | chr2_1:45940257-45940276 | Msa0209090:intron | 50.0% |
GTCCTGGATACACCAAATGG+TGG | - | chr2_1:45940262-45940281 | None:intergenic | 50.0% | |
TTGGTCGGTTGCTTGAGAAG+AGG | + | chr2_1:45940584-45940603 | Msa0209090:CDS | 50.0% | |
TGGTCGGTTGCTTGAGAAGA+GGG | + | chr2_1:45940585-45940604 | Msa0209090:CDS | 50.0% | |
CTTACGTGACAATCCTGGTG+AGG | + | chr2_1:45940847-45940866 | Msa0209090:CDS | 50.0% | |
GGTTCATCCTCATACCCAAG+TGG | + | chr2_1:45940872-45940891 | Msa0209090:CDS | 50.0% | |
CCATTGACCACTTGGGTATG+AGG | - | chr2_1:45940882-45940901 | None:intergenic | 50.0% | |
CCTCATACCCAAGTGGTCAA+TGG | + | chr2_1:45940879-45940898 | Msa0209090:CDS | 50.0% | |
CAGGAAGCCATTGACCACTT+GGG | - | chr2_1:45940889-45940908 | None:intergenic | 50.0% | |
GCAGGATTAATCGATGCTCC+AGG | - | chr2_1:45940908-45940927 | None:intergenic | 50.0% | |
AACAGAGGGAAGTAGGATGG+AGG | + | chr2_1:45941259-45941278 | Msa0209090:intron | 50.0% | |
ACAGAGGGAAGTAGGATGGA+GGG | + | chr2_1:45941260-45941279 | Msa0209090:intron | 50.0% | |
GAAGTAGGATGGAGGGGAAT+GGG | + | chr2_1:45941267-45941286 | Msa0209090:intron | 50.0% | |
GGAGATGAGGAAACGAGAGT+TGG | + | chr2_1:45941473-45941492 | Msa0209090:intron | 50.0% | |
ATGAGGAAACGAGAGTTGGG+AGG | + | chr2_1:45941477-45941496 | Msa0209090:intron | 50.0% | |
TGAGGAAACGAGAGTTGGGA+GGG | + | chr2_1:45941478-45941497 | Msa0209090:intron | 50.0% | |
GGCAAGGTATGCGTATCCAT+AGG | + | chr2_1:45942389-45942408 | Msa0209090:intron | 50.0% | |
GTGGGATCGCTTCACTAGTA+AGG | - | chr2_1:45942517-45942536 | None:intergenic | 50.0% | |
GAAGCGATCCCACATCTAGA+TGG | + | chr2_1:45942524-45942543 | Msa0209090:intron | 50.0% | |
TGCTATGTTGGCCACTACAG+CGG | - | chr2_1:45942597-45942616 | None:intergenic | 50.0% | |
GGCCAACATAGCAGTTGTCA+CGG | + | chr2_1:45942604-45942623 | Msa0209090:intron | 50.0% | |
TGCCGTGACAACTGCTATGT+TGG | - | chr2_1:45942609-45942628 | None:intergenic | 50.0% | |
CAGAAAAGTTGCCATCCCAC+TGG | + | chr2_1:45942883-45942902 | Msa0209090:intron | 50.0% | |
GCCGTGGACCTCAAAAATGT+TGG | - | chr2_1:45942914-45942933 | None:intergenic | 50.0% | |
TGCTCTTGAATCACTGGGTC+TGG | + | chr2_1:45943169-45943188 | Msa0209090:CDS | 50.0% | |
GAATCACTGGGTCTGGAGAA+AGG | + | chr2_1:45943176-45943195 | Msa0209090:CDS | 50.0% | |
CGCCACGTGAAATATCAACC+AGG | + | chr2_1:45943303-45943322 | Msa0209090:CDS | 50.0% | |
TGGGTTATACAGCATTGCCC+TGG | + | chr2_1:45944072-45944091 | Msa0209090:intron | 50.0% | |
CTGACAAGTAGCAGTGGGAA+AGG | - | chr2_1:45945089-45945108 | None:intergenic | 50.0% | |
! | CTTTCCCACTGCTACTTGTC+AGG | + | chr2_1:45945087-45945106 | Msa0209090:intron | 50.0% |
GAGATCCTGACAAGTAGCAG+TGG | - | chr2_1:45945095-45945114 | None:intergenic | 50.0% | |
CTCTACTGCATTTGGGAAGC+AGG | - | chr2_1:45945244-45945263 | None:intergenic | 50.0% | |
TGTGGATGCCCAATCTCCTA+TGG | + | chr2_1:45945265-45945284 | Msa0209090:CDS | 50.0% | |
GTTATCCCAACTAGAGGCTC+CGG | + | chr2_1:45945293-45945312 | Msa0209090:CDS | 50.0% | |
TGAATCCGGAGCCTCTAGTT+GGG | - | chr2_1:45945301-45945320 | None:intergenic | 50.0% | |
ACGCAGTTGCATGCTGAATC+CGG | - | chr2_1:45945315-45945334 | None:intergenic | 50.0% | |
TGCGTAACGGTGACCTTTCA+TGG | + | chr2_1:45945330-45945349 | Msa0209090:CDS | 50.0% | |
! | GCATCTGCAGCAGCTTTTAG+AGG | - | chr2_1:45945854-45945873 | None:intergenic | 50.0% |
TAAAAGCTGCTGCAGATGCG+TGG | + | chr2_1:45945855-45945874 | Msa0209090:CDS | 50.0% | |
! | TGCCACTTGGACGTTCGTAA+AGG | + | chr2_1:45945878-45945897 | Msa0209090:CDS | 50.0% |
CACCTTTACGAACGTCCAAG+TGG | - | chr2_1:45945883-45945902 | None:intergenic | 50.0% | |
! | GTTTGCTGGCCCACTAATCT+TGG | + | chr2_1:45945908-45945927 | Msa0209090:CDS | 50.0% |
!! | ACAGTTCGGATCGACTCGTT+AGG | - | chr2_1:45946895-45946914 | None:intergenic | 50.0% |
! | CCTTCTTAGTGCTGGATGTG+AGG | - | chr2_1:45947123-45947142 | None:intergenic | 50.0% |
CCTCACATCCAGCACTAAGA+AGG | + | chr2_1:45947120-45947139 | Msa0209090:intron | 50.0% | |
! | ATCCAGCACTAAGAAGGTGC+TGG | + | chr2_1:45947126-45947145 | Msa0209090:intron | 50.0% |
TCCACGATTAAGATGGGCAC+GGG | + | chr2_1:45947176-45947195 | Msa0209090:intron | 50.0% | |
! | TTCCAAGTCTTGTACGGAGC+TGG | + | chr2_1:45947303-45947322 | Msa0209090:CDS | 50.0% |
! | CGTAGTTGCTTTGCATCCAC+TGG | + | chr2_1:45947470-45947489 | Msa0209090:intron | 50.0% |
TACGTTCGATGCTTCTCCAG+TGG | - | chr2_1:45947489-45947508 | None:intergenic | 50.0% | |
AAGCTCTTCCCATCAGCCAA+AGG | - | chr2_1:45947520-45947539 | None:intergenic | 50.0% | |
TGTGGTGGTACAGAGATTGG+GGG | + | chr2_1:45947563-45947582 | Msa0209090:CDS | 50.0% | |
CGTCACTGGATCATTACTGC+AGG | + | chr2_1:45947592-45947611 | Msa0209090:CDS | 50.0% | |
GCTCTTGGATCCCTTATGCT+TGG | + | chr2_1:45948062-45948081 | Msa0209090:CDS | 50.0% | |
! | AAGGGAATGCCTCTCTGGAA+TGG | + | chr2_1:45948131-45948150 | Msa0209090:CDS | 50.0% |
TTGTGGAAACAGCTGCCATC+GGG | + | chr2_1:45948872-45948891 | Msa0209090:CDS | 50.0% | |
ACAGCTACAGACAACTGCTC+AGG | - | chr2_1:45948919-45948938 | None:intergenic | 50.0% | |
TACCAGTGCCATCTCTTCCA+AGG | + | chr2_1:45949130-45949149 | Msa0209090:CDS | 50.0% | |
TCCAAGGACAGCCTCAAACA+AGG | + | chr2_1:45949146-45949165 | Msa0209090:CDS | 50.0% | |
! | ACCTTGTTTGAGGCTGTCCT+TGG | - | chr2_1:45949150-45949169 | None:intergenic | 50.0% |
! | GGTTTTGCGGCAGAAACTTG+CGG | + | chr2_1:45949179-45949198 | Msa0209090:CDS | 50.0% |
CGTGGTCTCTCGCAATTCCA+AGG | - | chr2_1:45939540-45939559 | None:intergenic | 55.0% | |
AACTCTCCACCTGCGTCTCA+CGG | + | chr2_1:45939564-45939583 | Msa0209090:CDS | 55.0% | |
GAACTGATGCATCTGCCACG+TGG | + | chr2_1:45939605-45939624 | Msa0209090:CDS | 55.0% | |
CTTGCTGATGTTGTGCCACG+TGG | - | chr2_1:45939623-45939642 | None:intergenic | 55.0% | |
ATACGGGTCGGGTATCCAAG+CGG | - | chr2_1:45939728-45939747 | None:intergenic | 55.0% | |
CTCCTGCATACGCAGAGTCT+GGG | + | chr2_1:45940228-45940247 | Msa0209090:intron | 55.0% | |
TTCCCAGACTCTGCGTATGC+AGG | - | chr2_1:45940233-45940252 | None:intergenic | 55.0% | |
TGCATACGCAGAGTCTGGGA+AGG | + | chr2_1:45940232-45940251 | Msa0209090:intron | 55.0% | |
GCATACGCAGAGTCTGGGAA+GGG | + | chr2_1:45940233-45940252 | Msa0209090:intron | 55.0% | |
CATACGCAGAGTCTGGGAAG+GGG | + | chr2_1:45940234-45940253 | Msa0209090:intron | 55.0% | |
TGACCTTTCAGTCACGGCAC+GGG | - | chr2_1:45940290-45940309 | None:intergenic | 55.0% | |
GTGACCTTTCAGTCACGGCA+CGG | - | chr2_1:45940291-45940310 | None:intergenic | 55.0% | |
GGTCGGTTGCTTGAGAAGAG+GGG | + | chr2_1:45940586-45940605 | Msa0209090:CDS | 55.0% | |
CGTGACAATCCTGGTGAGGA+CGG | + | chr2_1:45940851-45940870 | Msa0209090:CDS | 55.0% | |
CCAGGAAGCCATTGACCACT+TGG | - | chr2_1:45940890-45940909 | None:intergenic | 55.0% | |
CCAAGTGGTCAATGGCTTCC+TGG | + | chr2_1:45940887-45940906 | Msa0209090:CDS | 55.0% | |
CAGAGGGAAGTAGGATGGAG+GGG | + | chr2_1:45941261-45941280 | Msa0209090:intron | 55.0% | |
GGAAGTAGGATGGAGGGGAA+TGG | + | chr2_1:45941266-45941285 | Msa0209090:intron | 55.0% | |
GGAAGGAAGCGACAGTAGTC+AGG | + | chr2_1:45941424-45941443 | Msa0209090:intron | 55.0% | |
AGGAAGCGACAGTAGTCAGG+AGG | + | chr2_1:45941427-45941446 | Msa0209090:intron | 55.0% | |
GGGAGGGAAGTGAGAGTAGT+CGG | + | chr2_1:45941494-45941513 | Msa0209090:intron | 55.0% | |
GGAGGGAAGTGAGAGTAGTC+GGG | + | chr2_1:45941495-45941514 | Msa0209090:intron | 55.0% | |
GGAAGTGAGAGTAGTCGGGT+GGG | + | chr2_1:45941499-45941518 | Msa0209090:intron | 55.0% | |
CTAACAGGAGCTCTGCTTCC+TGG | + | chr2_1:45941952-45941971 | Msa0209090:intron | 55.0% | |
GGCCACTACAGCGGTTTCTA+CGG | - | chr2_1:45942588-45942607 | None:intergenic | 55.0% | |
GAGAAGCCCAAATGCTGCTC+CGG | - | chr2_1:45942742-45942761 | None:intergenic | 55.0% | |
GTGACTGAGACTGACCAGTG+AGG | - | chr2_1:45942805-45942824 | None:intergenic | 55.0% | |
TGTTGGAAGAGCCAGTGGGA+TGG | - | chr2_1:45942897-45942916 | None:intergenic | 55.0% | |
ACCAGCGAGGCAAGAACTGT+CGG | - | chr2_1:45944619-45944638 | None:intergenic | 55.0% | |
GGGTATTTGAGAGACCAGCG+AGG | - | chr2_1:45944632-45944651 | None:intergenic | 55.0% | |
CTGAATCCGGAGCCTCTAGT+TGG | - | chr2_1:45945302-45945321 | None:intergenic | 55.0% | |
GCTGGCCCACTAATCTTGGA+TGG | + | chr2_1:45945912-45945931 | Msa0209090:CDS | 55.0% | |
!! | TTGGATGGATGATGGGGCCA+TGG | + | chr2_1:45945927-45945946 | Msa0209090:CDS | 55.0% |
AATGGATCCCCACTTGGCTC+CGG | + | chr2_1:45945995-45946014 | Msa0209090:CDS | 55.0% | |
CACCAGCACCTTCTTAGTGC+TGG | - | chr2_1:45947131-45947150 | None:intergenic | 55.0% | |
!! | GGTGCTGGTGTCTGCAATGA+AGG | + | chr2_1:45947141-45947160 | Msa0209090:intron | 55.0% |
ACCCGTGCCCATCTTAATCG+TGG | - | chr2_1:45947180-45947199 | None:intergenic | 55.0% | |
ACGATTAAGATGGGCACGGG+TGG | + | chr2_1:45947179-45947198 | Msa0209090:intron | 55.0% | |
CTCCAGCTCCGTACAAGACT+TGG | - | chr2_1:45947308-45947327 | None:intergenic | 55.0% | |
! | ATTGGGGGTGGATTCGTCAC+TGG | + | chr2_1:45947578-45947597 | Msa0209090:CDS | 55.0% |
ACCAGAAGGTGGTATCCCGA+TGG | - | chr2_1:45948890-45948909 | None:intergenic | 55.0% | |
ATCGGGATACCACCTTCTGG+TGG | + | chr2_1:45948889-45948908 | Msa0209090:CDS | 55.0% | |
TCGGGATACCACCTTCTGGT+GGG | + | chr2_1:45948890-45948909 | Msa0209090:CDS | 55.0% | |
GTCCTTGGAAGAGATGGCAC+TGG | - | chr2_1:45949135-45949154 | None:intergenic | 55.0% | |
GAGGCTGTCCTTGGAAGAGA+TGG | - | chr2_1:45949141-45949160 | None:intergenic | 55.0% | |
TACGGGTCGGGTATCCAAGC+GGG | - | chr2_1:45939727-45939746 | None:intergenic | 60.0% | |
GCTCCTGCATACGCAGAGTC+TGG | + | chr2_1:45940227-45940246 | Msa0209090:intron | 60.0% | |
TGGGAAGGGGTCCCACCATT+TGG | + | chr2_1:45940247-45940266 | Msa0209090:intron | 60.0% | |
GAACCCGTGCCGTGACTGAA+AGG | + | chr2_1:45940284-45940303 | Msa0209090:intron | 60.0% | |
GAGGATGAACCGTCCTCACC+AGG | - | chr2_1:45940863-45940882 | None:intergenic | 60.0% | |
GGGAAGTGAGAGTAGTCGGG+TGG | + | chr2_1:45941498-45941517 | Msa0209090:intron | 60.0% | |
GGCCGTAGAAACCGCTGTAG+TGG | + | chr2_1:45942583-45942602 | Msa0209090:intron | 60.0% | |
!! | CGGATAGTGGAGTGTAGCCG+TGG | - | chr2_1:45942930-45942949 | None:intergenic | 60.0% |
TCCGACAGTTCTTGCCTCGC+TGG | + | chr2_1:45944615-45944634 | Msa0209090:intron | 60.0% | |
!! | TGCAGATGCGTGGTGCCACT+TGG | + | chr2_1:45945865-45945884 | Msa0209090:CDS | 60.0% |
TGGCAAAGCCGGAGCCAAGT+GGG | - | chr2_1:45946006-45946025 | None:intergenic | 60.0% | |
TTGGCAAAGCCGGAGCCAAG+TGG | - | chr2_1:45946007-45946026 | None:intergenic | 60.0% | |
GGTGGTACAGAGATTGGGGG+TGG | + | chr2_1:45947566-45947585 | Msa0209090:CDS | 60.0% | |
GCCATCGGGATACCACCTTC+TGG | + | chr2_1:45948886-45948905 | Msa0209090:CDS | 60.0% | |
CGGGATACCACCTTCTGGTG+GGG | + | chr2_1:45948891-45948910 | Msa0209090:CDS | 60.0% | |
GGGATACCACCTTCTGGTGG+GGG | + | chr2_1:45948892-45948911 | Msa0209090:CDS | 60.0% | |
GCAGGTGGAGAGTTGCAGCG+TGG | - | chr2_1:45939558-45939577 | None:intergenic | 65.0% | |
CACGGCACGGGTTCAAGTCC+TGG | - | chr2_1:45940278-45940297 | None:intergenic | 65.0% | |
GATGGAGGGGAATGGGCCGA+GGG | + | chr2_1:45941274-45941293 | Msa0209090:intron | 65.0% | |
TGGGCCGAGGGAGGTTATGC+AGG | + | chr2_1:45941286-45941305 | Msa0209090:intron | 65.0% | |
GGCAAAGCCGGAGCCAAGTG+GGG | - | chr2_1:45946005-45946024 | None:intergenic | 65.0% | |
TCAGGACCCCCACCAGAAGG+TGG | - | chr2_1:45948901-45948920 | None:intergenic | 65.0% | |
TGCTCAGGACCCCCACCAGA+AGG | - | chr2_1:45948904-45948923 | None:intergenic | 65.0% | |
ATGGTCCTGACCCGCCCGCT+TGG | + | chr2_1:45939710-45939729 | Msa0209090:CDS | 70.0% | |
GGTATCCAAGCGGGCGGGTC+AGG | - | chr2_1:45939718-45939737 | None:intergenic | 70.0% | |
GGTCGGGTATCCAAGCGGGC+GGG | - | chr2_1:45939723-45939742 | None:intergenic | 70.0% | |
GGGTCGGGTATCCAAGCGGG+CGG | - | chr2_1:45939724-45939743 | None:intergenic | 70.0% | |
GGATGGAGGGGAATGGGCCG+AGG | + | chr2_1:45941273-45941292 | Msa0209090:intron | 70.0% | |
GGAGGGGAATGGGCCGAGGG+AGG | + | chr2_1:45941277-45941296 | Msa0209090:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 45939193 | 45949331 | 45939193 | ID=Msa0209090;Name=Msa0209090 |
chr2_1 | mRNA | 45939193 | 45949331 | 45939193 | ID=Msa0209090-mRNA-1;Parent=Msa0209090;Name=Msa0209090-mRNA-1;_AED=0.12;_eAED=0.12;_QI=212|0.92|0.93|1|0.92|0.86|15|104|733 |
chr2_1 | exon | 45939193 | 45939350 | 45939193 | ID=Msa0209090-mRNA-1:exon:13210;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45939436 | 45939743 | 45939436 | ID=Msa0209090-mRNA-1:exon:13211;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45940561 | 45940690 | 45940561 | ID=Msa0209090-mRNA-1:exon:13212;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45940785 | 45941053 | 45940785 | ID=Msa0209090-mRNA-1:exon:13213;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45943157 | 45943361 | 45943157 | ID=Msa0209090-mRNA-1:exon:13214;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45945109 | 45945149 | 45945109 | ID=Msa0209090-mRNA-1:exon:13215;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45945259 | 45945384 | 45945259 | ID=Msa0209090-mRNA-1:exon:13216;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45945586 | 45945680 | 45945586 | ID=Msa0209090-mRNA-1:exon:13217;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45945816 | 45946036 | 45945816 | ID=Msa0209090-mRNA-1:exon:13218;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45947275 | 45947369 | 45947275 | ID=Msa0209090-mRNA-1:exon:13219;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45947475 | 45947691 | 45947475 | ID=Msa0209090-mRNA-1:exon:13220;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45948032 | 45948157 | 45948032 | ID=Msa0209090-mRNA-1:exon:13221;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45948229 | 45948327 | 45948229 | ID=Msa0209090-mRNA-1:exon:13222;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45948823 | 45949035 | 45948823 | ID=Msa0209090-mRNA-1:exon:13223;Parent=Msa0209090-mRNA-1 |
chr2_1 | exon | 45949117 | 45949331 | 45949117 | ID=Msa0209090-mRNA-1:exon:13224;Parent=Msa0209090-mRNA-1 |
chr2_1 | five_prime_UTR | 45939193 | 45939350 | 45939193 | ID=Msa0209090-mRNA-1:five_prime_utr;Parent=Msa0209090-mRNA-1 |
chr2_1 | five_prime_UTR | 45939436 | 45939489 | 45939436 | ID=Msa0209090-mRNA-1:five_prime_utr;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45939490 | 45939743 | 45939490 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45940561 | 45940690 | 45940561 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45940785 | 45941053 | 45940785 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45943157 | 45943361 | 45943157 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45945109 | 45945149 | 45945109 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45945259 | 45945384 | 45945259 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45945586 | 45945680 | 45945586 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45945816 | 45946036 | 45945816 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45947275 | 45947369 | 45947275 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45947475 | 45947691 | 45947475 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45948032 | 45948157 | 45948032 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45948229 | 45948327 | 45948229 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45948823 | 45949035 | 45948823 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | CDS | 45949117 | 45949227 | 45949117 | ID=Msa0209090-mRNA-1:cds;Parent=Msa0209090-mRNA-1 |
chr2_1 | three_prime_UTR | 45949228 | 45949331 | 45949228 | ID=Msa0209090-mRNA-1:three_prime_utr;Parent=Msa0209090-mRNA-1 |
Gene Sequence |
Protein sequence |