AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0212770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212770 MtrunA17_Chr2g0312131 98.409 880 14 0 1 880 1 880 0.0 1786
Msa0212770 MtrunA17_Chr8g0358191 68.594 882 255 12 4 880 1 865 0.0 1079
Msa0212770 MtrunA17_Chr2g0312151 63.194 864 257 14 21 879 17 824 0.0 999
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212770 AT1G79090.2 46.560 872 358 19 4 857 1 782 0.0 664
Msa0212770 AT1G79090.1 46.560 872 358 19 4 857 1 782 0.0 664
Msa0212770 AT1G79090.3 46.560 872 358 19 4 857 1 782 0.0 664
Msa0212770 AT4G14990.1 45.698 860 356 18 34 878 22 785 0.0 645
Msa0212770 AT3G22270.1 50.000 690 300 13 196 878 129 780 0.0 617
Msa0212770 AT3G22270.1 45.238 168 68 8 35 194 24 175 2.23e-28 122
Msa0212770 AT4G14990.2 45.714 805 327 17 89 878 1 710 0.0 599

Find 259 sgRNAs with CRISPR-Local

Find 626 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGTCATGTTCCTGTTTC+AGG 0.132478 2_1:+54915295 Msa0212770:CDS
AGATGGTGCTTCCCTTATTT+TGG 0.157861 2_1:+54922739 Msa0212770:CDS
CCAATAACACCTGGGTTTCT+TGG 0.199570 2_1:-54919824 None:intergenic
AACCTATATCTCTACTTTCT+AGG 0.218300 2_1:+54914968 Msa0212770:five_prime_UTR
GTGAAGGAAGTTCCTTTATT+TGG 0.234831 2_1:-54922025 None:intergenic
CAGCGTTCTGTTCCCGTGAT+TGG 0.255183 2_1:+54923064 Msa0212770:CDS
ATGAACTGCTTTCACTCTTT+TGG 0.256404 2_1:-54921836 None:intergenic
GCCTCATTTGATGAATTCTT+TGG 0.257973 2_1:+54922848 Msa0212770:CDS
AAAGGTGGGGATTAAATAAA+TGG 0.261654 2_1:-54921710 None:intergenic
AGCAGCCTGCAACTATAATA+TGG 0.261879 2_1:+54922805 Msa0212770:CDS
CAAGAACAGATACCAAAATA+AGG 0.266560 2_1:-54922751 None:intergenic
TTAGCACATGGGGTTGGATT+TGG 0.283811 2_1:-54915023 None:intergenic
TCATGCAATACTTAGTAATA+AGG 0.284117 2_1:-54922871 None:intergenic
CCAAGAAACCCAGGTGTTAT+TGG 0.287071 2_1:+54919824 Msa0212770:CDS
CGGCATTTAAGATTCTTATT+TGG 0.294157 2_1:+54922551 Msa0212770:CDS
CGCCCTGTTGGAAGCACTGC+TGG 0.294491 2_1:+54922716 Msa0212770:CDS
GCATCACAATATGCATTCTT+TGG 0.300944 2_1:+54916406 Msa0212770:CDS
TGAAGGAAGTTCCTTTATTT+GGG 0.308138 2_1:-54922024 None:intergenic
CTACCAGGGATGGAAGAATT+TGG 0.312227 2_1:-54922155 None:intergenic
CCGCCAAAGGAAGTTATTAC+TGG 0.317274 2_1:+54923033 Msa0212770:CDS
GCCGGGTGGTCGATCTCAAC+AGG 0.318303 2_1:+54921296 Msa0212770:CDS
TGATCCTCATGCATTTCTTC+AGG 0.318498 2_1:+54922064 Msa0212770:CDS
ATGGTGGATATGGATGGTTT+TGG 0.320645 2_1:+54915223 Msa0212770:CDS
ACCCTCCCAACTCGACTTCC+TGG 0.325057 2_1:-54916441 None:intergenic
TTCTGGAGATCTTAGGCAAT+TGG 0.327146 2_1:+54915276 Msa0212770:CDS
CTTGGTGGACCTCCTAGTTC+TGG 0.338833 2_1:+54915259 Msa0212770:CDS
GAAGACTTCTGTACCAATAT+TGG 0.339254 2_1:-54921255 None:intergenic
AGACATAAATCAACTCAAAA+AGG 0.342250 2_1:+54921768 Msa0212770:CDS
TGCTCTTGCCTTAGCTGCTC+AGG 0.346127 2_1:-54921027 None:intergenic
ACGATCTTACAACCACCTTT+TGG 0.353378 2_1:+54916714 Msa0212770:CDS
ACTGCTTTACTCACTTTCTC+TGG 0.362656 2_1:-54919858 None:intergenic
ACTCAACTGTAGCGCAGAAT+TGG 0.363263 2_1:-54921415 None:intergenic
TATCTTCAATTGCTTCTTCC+TGG 0.363691 2_1:+54922491 Msa0212770:CDS
ATTACCCATATTATAGTTGC+AGG 0.364811 2_1:-54922810 None:intergenic
AGGTTGTCTGCCAATGTATC+CGG 0.366313 2_1:+54922624 Msa0212770:CDS
TCTCCAGCAGTGCTTCCAAC+AGG 0.371729 2_1:-54922719 None:intergenic
GCAAGGAGCTTGCGTCCCTT+AGG 0.374702 2_1:-54922464 None:intergenic
ACCCTGCTTGGTTGACCAAT+TGG 0.375153 2_1:-54921521 None:intergenic
TAGTCATCGTTTATCACATC+AGG 0.375229 2_1:+54921797 Msa0212770:CDS
TAGCCTGCAGATTGCTGAAC+AGG 0.386467 2_1:-54921669 None:intergenic
AAAGCAGTTCATTACAGTTT+CGG 0.387499 2_1:+54921847 Msa0212770:CDS
GCTGCTGCTCCAGTGTGATA+TGG 0.388425 2_1:-54921354 None:intergenic
TTTCTGCCCAACCCAAATAA+AGG 0.389774 2_1:+54922013 Msa0212770:CDS
GAAAGAATGGGCACAAGGTT+GGG 0.391458 2_1:+54922396 Msa0212770:CDS
ACTAGCTACTTCACTTCAAC+TGG 0.395783 2_1:+54922361 Msa0212770:CDS
ACGAAGAAGGCAGGTCCTAT+TGG 0.395900 2_1:+54922334 Msa0212770:CDS
AGGAGGTTGGACCGATCTCC+TGG 0.398000 2_1:-54921549 None:intergenic
CATGTAGTCACTGCAGCTGC+TGG 0.399596 2_1:-54922590 None:intergenic
ATATGGGTAATCGTTCCTTT+TGG 0.408815 2_1:+54922822 Msa0212770:CDS
AAAGAGACGATGTTCATAAC+TGG 0.409081 2_1:+54920884 Msa0212770:CDS
AAATGCATGAGGATCATTAC+TGG 0.409536 2_1:-54922057 None:intergenic
CATTTAAGATTCTTATTTGG+TGG 0.413621 2_1:+54922554 Msa0212770:CDS
GATAGTGAAGGTTCAATTGA+TGG 0.416315 2_1:+54920925 Msa0212770:CDS
CAAGGTTGGGCTTGCAGCTA+AGG 0.417819 2_1:+54922409 Msa0212770:CDS
TTTCTTCAGGTTGATTCCCT+AGG 0.418382 2_1:+54922077 Msa0212770:CDS
TTCATCACTTGTCATATGCT+TGG 0.419448 2_1:-54921871 None:intergenic
ACCCTAGAAAGTAGAGATAT+AGG 0.419474 2_1:-54914970 None:intergenic
TAGACTCAAAAGTTGGCAAA+TGG 0.420140 2_1:-54916477 None:intergenic
ACCTATATCTCTACTTTCTA+GGG 0.422926 2_1:+54914969 Msa0212770:five_prime_UTR
CAATCTGCAGGCTACTTGTC+AGG 0.426282 2_1:+54921678 Msa0212770:CDS
GAAGTTCCTTTATTTGGGTT+GGG 0.427218 2_1:-54922019 None:intergenic
AACAATAATGCTGGAGGCAG+TGG 0.428288 2_1:+54923091 Msa0212770:CDS
CTTGCGCGCAAGAGTTCAAC+AGG 0.428533 2_1:-54922992 None:intergenic
AATCCAGTAATAACTTCCTT+TGG 0.429233 2_1:-54923036 None:intergenic
CTCCTAGTTCTGGAGATCTT+AGG 0.430807 2_1:+54915269 Msa0212770:CDS
GGAAAGAATGGGCACAAGGT+TGG 0.431299 2_1:+54922395 Msa0212770:CDS
CCTTTGGCGGTCATCAGTGT+GGG 0.432738 2_1:-54923020 None:intergenic
CAACAACTACAGCTTCATAA+TGG 0.434498 2_1:+54921588 Msa0212770:CDS
ACTTCAACTGGTTGACCCGC+TGG 0.437930 2_1:+54922373 Msa0212770:CDS
CATCCTCCTCTGCGCCCTGT+TGG 0.442323 2_1:+54922704 Msa0212770:CDS
GGAAGTTCCTTTATTTGGGT+TGG 0.444412 2_1:-54922020 None:intergenic
GATCCAATGTCATCCACATT+TGG 0.449177 2_1:-54922938 None:intergenic
TTTCACTTCTTATCCTCCGC+CGG 0.449353 2_1:+54921278 Msa0212770:CDS
GTAAGCTCCTGTTGTTTGTC+GGG 0.449579 2_1:-54921216 None:intergenic
TTCAGAGAAGCCTCTAGAAC+AGG 0.453266 2_1:+54922193 Msa0212770:CDS
GTTGACCCGCTGGGAAAGAA+TGG 0.453849 2_1:+54922383 Msa0212770:CDS
CAAGGAGCTTGCGTCCCTTA+GGG 0.453938 2_1:-54922463 None:intergenic
AGTTGAGTGGATTAAACCTT+GGG 0.454503 2_1:+54921430 Msa0212770:CDS
AAGAACAGATACCAAAATAA+GGG 0.457924 2_1:-54922750 None:intergenic
TTGCATCAGAAACCTGAAAC+AGG 0.461055 2_1:-54915307 None:intergenic
AACCAATTGGTCAACCAAGC+AGG 0.461811 2_1:+54921519 Msa0212770:CDS
AAACGTTAAAATGAAGGAAA+GGG 0.461910 2_1:-54915065 None:intergenic
ATTGGATTTAACAATAATGC+TGG 0.462938 2_1:+54923082 Msa0212770:CDS
CTAGTGAGCCAGTTCACAAC+TGG 0.463433 2_1:+54921073 Msa0212770:CDS
TGCTGCTAATGCAATTAGTA+AGG 0.464588 2_1:+54922964 Msa0212770:CDS
GAAAGGGGAAGATCTGTGAT+AGG 0.466355 2_1:-54915049 None:intergenic
TGTATCCGGGGAATGGATCT+TGG 0.468589 2_1:+54922638 Msa0212770:CDS
TTCATATCCCGACAAACAAC+AGG 0.473230 2_1:+54921209 Msa0212770:CDS
AACCTTGGGTCACACTTTGG+TGG 0.473373 2_1:+54921444 Msa0212770:CDS
CTGGCTCACTAGAGCAATGT+TGG 0.473437 2_1:-54921062 None:intergenic
CTTTGGTAAAGATGCTGTCC+AGG 0.474602 2_1:+54916423 Msa0212770:CDS
TCTGGAGATCTTAGGCAATT+GGG 0.474981 2_1:+54915277 Msa0212770:CDS
TTAAACCTTGGGTCACACTT+TGG 0.475159 2_1:+54921441 Msa0212770:CDS
TTCTGTATTCGTTGACTAAG+AGG 0.475936 2_1:-54921498 None:intergenic
TTCTTCAGGTTGATTCCCTA+GGG 0.477004 2_1:+54922078 Msa0212770:CDS
TAGTTTGCATGACCGTCCTT+CGG 0.479765 2_1:+54922531 Msa0212770:CDS
CTTATTTGGTGGGCTCCCCT+CGG 0.480912 2_1:+54922565 Msa0212770:CDS
TAGAAGAAACGTTAAAATGA+AGG 0.483784 2_1:-54915071 None:intergenic
AGTAAGCTCCTGTTGTTTGT+CGG 0.486049 2_1:-54921217 None:intergenic
TTCACTTCTTATCCTCCGCC+GGG 0.486593 2_1:+54921279 Msa0212770:CDS
AAGTAGCTAGTCCTTCCAAT+AGG 0.488398 2_1:-54922349 None:intergenic
GTAAATGGGCAAGAGAAGAC+TGG 0.491821 2_1:-54920969 None:intergenic
TCCAGATTCTACATCTGATC+TGG 0.493925 2_1:+54920858 Msa0212770:intron
AGACTCAAAAGTTGGCAAAT+GGG 0.495998 2_1:-54916476 None:intergenic
TCTCCAAATTCTTCCATCCC+TGG 0.497208 2_1:+54922152 Msa0212770:CDS
TTTGGTATCTGTTCTTGAGA+GGG 0.497468 2_1:+54922757 Msa0212770:CDS
CCAGTAATAACTTCCTTTGG+CGG 0.497506 2_1:-54923033 None:intergenic
ACTGCAGCTGCTGGATCCGA+GGG 0.497845 2_1:-54922581 None:intergenic
TTTATTTGGGTTGGGCAGAA+AGG 0.497854 2_1:-54922011 None:intergenic
CTGCCAATGTATCCGGGGAA+TGG 0.498064 2_1:+54922631 Msa0212770:CDS
GCAGCCTGCAACTATAATAT+GGG 0.498589 2_1:+54922806 Msa0212770:CDS
TCAGGTTGATTCCCTAGGGA+GGG 0.499269 2_1:+54922082 Msa0212770:CDS
CTTCATATCCTGAGCAGCTA+AGG 0.502424 2_1:+54921019 Msa0212770:CDS
TGGTAATAGTCATCTATGTA+TGG 0.502833 2_1:-54921942 None:intergenic
GGTTGTCTGCCAATGTATCC+GGG 0.503863 2_1:+54922625 Msa0212770:CDS
ATTTAAGATTCTTATTTGGT+GGG 0.505746 2_1:+54922555 Msa0212770:CDS
GTTGGAAGCACTGCTGGAGA+TGG 0.505988 2_1:+54922722 Msa0212770:CDS
GCTGTCCAGGAAGTCGAGTT+GGG 0.505992 2_1:+54916436 Msa0212770:CDS
GAAACGTTAAAATGAAGGAA+AGG 0.506189 2_1:-54915066 None:intergenic
ATCAAATGAGGCCTGCCAAA+AGG 0.507360 2_1:-54922837 None:intergenic
CCACGTTCACCAATAACACC+TGG 0.510228 2_1:-54919833 None:intergenic
AAGGATAGTATCTGTCCCTA+AGG 0.510426 2_1:+54922448 Msa0212770:CDS
TTATAGTTGCAGGCTGCTTG+TGG 0.511165 2_1:-54922800 None:intergenic
CTTCAGCGTTTACATCTCAA+AGG 0.512404 2_1:+54915166 Msa0212770:five_prime_UTR
TCCTTTGGCGGTCATCAGTG+TGG 0.513385 2_1:-54923021 None:intergenic
CATCCTGTTCAGCAATCTGC+AGG 0.513845 2_1:+54921666 Msa0212770:CDS
GTGATCATACTTGCTATTGA+CGG 0.514794 2_1:-54921745 None:intergenic
ACCGTCCTCAATTGTGACTC+TGG 0.515769 2_1:-54922231 None:intergenic
TGCTGTCCAGGAAGTCGAGT+TGG 0.516212 2_1:+54916435 Msa0212770:CDS
AAGGTGGGGATTAAATAAAT+GGG 0.518012 2_1:-54921709 None:intergenic
AGGAATTTAGCACATGGGGT+TGG 0.518740 2_1:-54915029 None:intergenic
GTTGCTGCAGCATATTACTA+AGG 0.519246 2_1:-54921569 None:intergenic
TCAACGAATACAGAACCAAT+TGG 0.519596 2_1:+54921506 Msa0212770:CDS
AACCAAGCAGGGTTATATCC+AGG 0.519950 2_1:+54921531 Msa0212770:CDS
TTCAGCGTTTACATCTCAAA+GGG 0.521424 2_1:+54915167 Msa0212770:five_prime_UTR
GATCCATTCCCCGGATACAT+TGG 0.522694 2_1:-54922634 None:intergenic
GTGACTCTGGCAGCAAATGT+AGG 0.523060 2_1:-54922218 None:intergenic
CCCTGTTGAGATCGACCACC+CGG 0.523910 2_1:-54921297 None:intergenic
ATCTTTAGATCAGAGCTACC+AGG 0.523916 2_1:-54922170 None:intergenic
TCATGCAAACTATCCGCATA+AGG 0.523978 2_1:-54922520 None:intergenic
CTTCAACTGGTTGACCCGCT+GGG 0.524782 2_1:+54922374 Msa0212770:CDS
TCTGTATTCGTTGACTAAGA+GGG 0.525367 2_1:-54921497 None:intergenic
CACTGGAGCAGCAGCTCAGT+TGG 0.526269 2_1:+54921362 Msa0212770:CDS
CTTGTGGCTGATTAGACTGT+AGG 0.526747 2_1:-54922292 None:intergenic
ATTATTGTTAAATCCAATCA+CGG 0.531164 2_1:-54923077 None:intergenic
ACGAAAATGAAACCCTCCCT+AGG 0.531200 2_1:-54922094 None:intergenic
AATTGCGTTCCACCATCTTG+TGG 0.531305 2_1:-54922308 None:intergenic
TCCTCATTAGACTCAAAAGT+TGG 0.531442 2_1:-54916484 None:intergenic
TTGTGGATCGGTTAGAAGCT+CGG 0.532013 2_1:-54922783 None:intergenic
TGATCAAGCCAGTTGTGAAC+TGG 0.534986 2_1:-54921081 None:intergenic
TGTGCCCATTCTTTCCCAGC+GGG 0.535301 2_1:-54922388 None:intergenic
GCCAAAGAATTCATCAAATG+AGG 0.536456 2_1:-54922849 None:intergenic
TATACAAAATGCACCAAATG+TGG 0.537033 2_1:+54922925 Msa0212770:CDS
CAACATCCTTACCTTCCAAA+AGG 0.537944 2_1:-54916729 None:intergenic
CAGCATATTACTAAGGAGGT+TGG 0.537947 2_1:-54921562 None:intergenic
GGATGAGCTAGGAGAAAGGT+GGG 0.538219 2_1:-54921724 None:intergenic
CACTGCAGCTGCTGGATCCG+AGG 0.538390 2_1:-54922582 None:intergenic
GAGCACCAAGATCCATTCCC+CGG 0.541631 2_1:-54922643 None:intergenic
CTCCTGGATATAACCCTGCT+TGG 0.542193 2_1:-54921533 None:intergenic
TCGGCCTCGCCCTCTTCTTG+AGG 0.542370 2_1:+54922124 Msa0212770:CDS
AATTCTGCGCTACAGTTGAG+TGG 0.543938 2_1:+54921417 Msa0212770:CDS
TTCAGGTTGATTCCCTAGGG+AGG 0.544020 2_1:+54922081 Msa0212770:CDS
TTGACCCGCTGGGAAAGAAT+GGG 0.544277 2_1:+54922384 Msa0212770:CDS
TGCTGCCAGAGTCACAATTG+AGG 0.547539 2_1:+54922226 Msa0212770:CDS
CACTAGAGCAATGTTGGAGG+TGG 0.548928 2_1:-54921056 None:intergenic
GGGGATTAAATAAATGGGAC+TGG 0.549761 2_1:-54921704 None:intergenic
CAGTTGAGTGGATTAAACCT+TGG 0.552867 2_1:+54921429 Msa0212770:CDS
GCAATTAAGACGAAGAAGGC+AGG 0.555035 2_1:+54922325 Msa0212770:CDS
GTTGCAGGCTGCTTGTGGAT+CGG 0.560942 2_1:-54922795 None:intergenic
TGCCTAAGATCTCCAGAACT+AGG 0.561812 2_1:-54915271 None:intergenic
AACACACGACAATATCCTAC+TGG 0.561844 2_1:+54921468 Msa0212770:CDS
TAAATGGGCAAGAGAAGACT+GGG 0.566055 2_1:-54920968 None:intergenic
TTCCTGGTAGTGACCTTATG+CGG 0.567547 2_1:+54922507 Msa0212770:CDS
AACGTTAAAATGAAGGAAAG+GGG 0.568463 2_1:-54915064 None:intergenic
TCAGCCTCAAGAAGAGGGCG+AGG 0.570999 2_1:-54922128 None:intergenic
TCCAGGAAGTCGAGTTGGGA+GGG 0.571151 2_1:+54916440 Msa0212770:CDS
GTCCAGGAAGTCGAGTTGGG+AGG 0.571213 2_1:+54916439 Msa0212770:CDS
CTTTGGCGGTCATCAGTGTG+GGG 0.573735 2_1:-54923019 None:intergenic
TAGATCAGAGCTACCAGGGA+TGG 0.575294 2_1:-54922165 None:intergenic
AAGTGGCCTGTACTATGACT+TGG 0.575535 2_1:-54921324 None:intergenic
TGAGATCGACCACCCGGCGG+AGG 0.575667 2_1:-54921291 None:intergenic
ATATGAAGATGTTCTGTACA+AGG 0.577232 2_1:-54921193 None:intergenic
ACCAATTGGTCAACCAAGCA+GGG 0.577462 2_1:+54921520 Msa0212770:CDS
TTGCTATTGACGGATGAGCT+AGG 0.577997 2_1:-54921735 None:intergenic
CAGTCTAATCAGCCACAAGA+TGG 0.578208 2_1:+54922296 Msa0212770:CDS
TAGTTGAACAAGGCTGTCAG+TGG 0.579597 2_1:+54919800 Msa0212770:intron
CTTCCAACAGGGCGCAGAGG+AGG 0.579786 2_1:-54922707 None:intergenic
GCACCAAATGTGGATGACAT+TGG 0.580947 2_1:+54922935 Msa0212770:CDS
CCAGGTGTTATTGGTGAACG+TGG 0.581152 2_1:+54919833 Msa0212770:CDS
GCTCACTAGAGCAATGTTGG+AGG 0.581610 2_1:-54921059 None:intergenic
CCCACACTGATGACCGCCAA+AGG 0.584052 2_1:+54923020 Msa0212770:CDS
CGAAAATGAAACCCTCCCTA+GGG 0.584674 2_1:-54922093 None:intergenic
CTCCAGCAGTGCTTCCAACA+GGG 0.591053 2_1:-54922718 None:intergenic
GGTTCTCCAAGTCATAGTAC+AGG 0.591619 2_1:+54921318 Msa0212770:CDS
GAGAATCAGCCTCAAGAAGA+GGG 0.592961 2_1:-54922133 None:intergenic
TGACGGATGAGCTAGGAGAA+AGG 0.593268 2_1:-54921728 None:intergenic
AATAATGCTGGAGGCAGTGG+AGG 0.594596 2_1:+54923094 Msa0212770:CDS
CAGGGTTATATCCAGGAGAT+CGG 0.595838 2_1:+54921538 Msa0212770:CDS
ATAAGAATCTTAAATGCCGA+AGG 0.597513 2_1:-54922547 None:intergenic
CGGATGAGCTAGGAGAAAGG+TGG 0.598260 2_1:-54921725 None:intergenic
GTGCTTCCAACAGGGCGCAG+AGG 0.599188 2_1:-54922710 None:intergenic
TTATTGTTAAATCCAATCAC+GGG 0.599401 2_1:-54923076 None:intergenic
AGAAGGCAGGTCCTATTGGA+AGG 0.601061 2_1:+54922338 Msa0212770:CDS
ATATGAAGATGTTCTGTACA+AGG 0.605692 2_1:-54921004 None:intergenic
TTCCACCAAAGTGTGACCCA+AGG 0.608336 2_1:-54921446 None:intergenic
CTGTATTCGTTGACTAAGAG+GGG 0.609537 2_1:-54921496 None:intergenic
GGAGAATCAGCCTCAAGAAG+AGG 0.611695 2_1:-54922134 None:intergenic
GTCAGTGGACCAAGAAACCC+AGG 0.612755 2_1:+54919815 Msa0212770:CDS
ATCCGCATAAGGTCACTACC+AGG 0.615411 2_1:-54922509 None:intergenic
TGATAGGAATTTAGCACATG+GGG 0.615865 2_1:-54915033 None:intergenic
AATGTAGGCTCCTGTTCTAG+AGG 0.616073 2_1:-54922203 None:intergenic
GTGATAGGAATTTAGCACAT+GGG 0.616172 2_1:-54915034 None:intergenic
GAATCTTAAATGCCGAAGGA+CGG 0.616530 2_1:-54922543 None:intergenic
GAACGCAATTAAGACGAAGA+AGG 0.618019 2_1:+54922321 Msa0212770:CDS
GCTGCAGCATATTACTAAGG+AGG 0.621104 2_1:-54921566 None:intergenic
CATCCTTACCTTCCAAAAGG+TGG 0.621852 2_1:-54916726 None:intergenic
CAGAATGCGTATGATAGTGA+AGG 0.623436 2_1:+54920913 Msa0212770:CDS
TTCGTGTAAGTGTGGAATGG+AGG 0.625180 2_1:-54921163 None:intergenic
TGGGGTTGGATTTGGATCAG+AGG 0.626210 2_1:-54915015 None:intergenic
CGAGTTGGGAGGGTTAGAAG+AGG 0.630131 2_1:+54916450 Msa0212770:CDS
AGGATAGTATCTGTCCCTAA+GGG 0.631077 2_1:+54922449 Msa0212770:CDS
AGTCATCGTTTATCACATCA+GGG 0.632224 2_1:+54921798 Msa0212770:CDS
GGATTTAACAATAATGCTGG+AGG 0.633310 2_1:+54923085 Msa0212770:CDS
GCCAGAGTCACAATTGAGGA+CGG 0.634189 2_1:+54922230 Msa0212770:CDS
CACGTTCACCAATAACACCT+GGG 0.634807 2_1:-54919832 None:intergenic
TGATTCGTGTAAGTGTGGAA+TGG 0.635944 2_1:-54921166 None:intergenic
TCTAATCAGCCACAAGATGG+TGG 0.638420 2_1:+54922299 Msa0212770:CDS
CCGGGTGGTCGATCTCAACA+GGG 0.647254 2_1:+54921297 Msa0212770:CDS
GACTACATGCAACCTTGCCG+AGG 0.648938 2_1:+54922604 Msa0212770:CDS
GCAATTGAAGATACTTCGCA+AGG 0.650941 2_1:-54922481 None:intergenic
GATACATTGGCAGACAACCT+CGG 0.651610 2_1:-54922621 None:intergenic
TCAACCTGAAGAAATGCATG+AGG 0.652261 2_1:-54922068 None:intergenic
TGCAATTGAGTCATCAAGTG+AGG 0.653732 2_1:-54921621 None:intergenic
TTTGGCGGTCATCAGTGTGG+GGG 0.654262 2_1:-54923018 None:intergenic
AGCGCAGAATTGGAGAAATG+TGG 0.654529 2_1:-54921405 None:intergenic
ATACTATCCTTATGAAAACA+AGG 0.654648 2_1:-54922436 None:intergenic
ACTTCTTATCCTCCGCCGGG+TGG 0.654695 2_1:+54921282 Msa0212770:CDS
TGTGATAGGAATTTAGCACA+TGG 0.657917 2_1:-54915035 None:intergenic
ATTGGCAGACAACCTCGGCA+AGG 0.658718 2_1:-54922616 None:intergenic
CTAAGATCTCCAGAACTAGG+AGG 0.659144 2_1:-54915268 None:intergenic
GGTGTTGATTCGTGTAAGTG+TGG 0.659946 2_1:-54921171 None:intergenic
TTACTGGAACGTGTTCGTGA+AGG 0.662370 2_1:-54922041 None:intergenic
TATGAAGATGTTCTGTACAA+GGG 0.667003 2_1:-54921192 None:intergenic
GTTGTCTGCCAATGTATCCG+GGG 0.671523 2_1:+54922626 Msa0212770:CDS
TCTTTAGATCAGAGCTACCA+GGG 0.673251 2_1:-54922169 None:intergenic
CTGCAGCTGCTGGATCCGAG+GGG 0.675081 2_1:-54922580 None:intergenic
CTAAGAGGGGAGGAACCAGT+AGG 0.676397 2_1:-54921483 None:intergenic
GCTGGGAAAGAATGGGCACA+AGG 0.677709 2_1:+54922391 Msa0212770:CDS
TTGAACATTCCATATCACAC+TGG 0.678952 2_1:+54921345 Msa0212770:CDS
TTGTGCCCATTCTTTCCCAG+CGG 0.682905 2_1:-54922389 None:intergenic
GGAGGGACTGCATGATACTG+TGG 0.693947 2_1:-54922901 None:intergenic
TATTCGTTGACTAAGAGGGG+AGG 0.698688 2_1:-54921493 None:intergenic
TGTGATATGGAATGTTCAAG+TGG 0.701817 2_1:-54921341 None:intergenic
CAGCTCATGATGACAAACGA+TGG 0.714656 2_1:+54921124 Msa0212770:CDS
GATGAGCTAGGAGAAAGGTG+GGG 0.715172 2_1:-54921723 None:intergenic
AAGTGTGGAATGGAGGTATG+CGG 0.728702 2_1:-54921156 None:intergenic
ATAGATGACTATTACCACCA+AGG 0.739114 2_1:+54921948 Msa0212770:CDS
TGTTGAGATCGACCACCCGG+CGG 0.777403 2_1:-54921294 None:intergenic
AAATGGGCAAGAGAAGACTG+GGG 0.800097 2_1:-54920967 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATTATTTATTTTTTT+TGG + chr2_1:54916236-54916255 Msa0212770:intron 0.0%
!!! TATTATTATTTATTTTTTTT+GGG + chr2_1:54916237-54916256 Msa0212770:intron 0.0%
!!! TTTTAATTCTTTTGTTTAAT+TGG + chr2_1:54915334-54915353 Msa0212770:intron 10.0%
!!! TTATTTAATTTGAGTTTTTT+TGG + chr2_1:54915417-54915436 Msa0212770:intron 10.0%
!! TATTATTATTATTCAATTGT+TGG - chr2_1:54917617-54917636 None:intergenic 10.0%
!! TAATAAAAGAAAAAGAAAAT+TGG - chr2_1:54919897-54919916 None:intergenic 10.0%
!!! TATTTTTTATAACAAAGCAT+TGG - chr2_1:54916056-54916075 None:intergenic 15.0%
!! AAAGTTATTATCTATTTCAT+AGG + chr2_1:54916161-54916180 Msa0212770:intron 15.0%
!! AGATAAAATTATTATCTATG+TGG + chr2_1:54916200-54916219 Msa0212770:intron 15.0%
!!! TTATTTATTTTTTTTGGGTT+TGG + chr2_1:54916242-54916261 Msa0212770:intron 15.0%
!!! TTTAAGTAATTCTAAGAATT+TGG + chr2_1:54916333-54916352 Msa0212770:intron 15.0%
!! TATAAATTTAGATTATCCTT+AGG + chr2_1:54917790-54917809 Msa0212770:intron 15.0%
!! TAAATGTAAATATTCAAAAG+CGG + chr2_1:54918187-54918206 Msa0212770:intron 15.0%
!!! TATGTTATTTATAAAGTGAT+TGG + chr2_1:54918376-54918395 Msa0212770:intron 15.0%
!!! ATTTGTATTTTTATTTGATG+TGG - chr2_1:54919040-54919059 None:intergenic 15.0%
!! ACATCAAATAAAAATACAAA+TGG + chr2_1:54919039-54919058 Msa0212770:intron 15.0%
!! TGATTATAAATAAAAAAGTG+TGG + chr2_1:54919249-54919268 Msa0212770:intron 15.0%
!!! GATTATAAATAAAAAAGTGT+GGG + chr2_1:54919250-54919269 Msa0212770:intron 15.0%
!! CAAACATATTTGAATATTAT+TGG + chr2_1:54919525-54919544 Msa0212770:intron 15.0%
!! AAAAAAACTTAGTATTCATA+TGG - chr2_1:54919757-54919776 None:intergenic 15.0%
!! AAATAAATTATGTCAAATTC+TGG + chr2_1:54919917-54919936 Msa0212770:intron 15.0%
!!! TTGAGTTTTTTTGGTATAAT+TGG + chr2_1:54915426-54915445 Msa0212770:intron 20.0%
!! TAAAAATTTGTAAGTCTGTT+TGG - chr2_1:54915816-54915835 None:intergenic 20.0%
!! CATTAATCAGTCATAAATAA+GGG - chr2_1:54915877-54915896 None:intergenic 20.0%
!! TCATTAATCAGTCATAAATA+AGG - chr2_1:54915878-54915897 None:intergenic 20.0%
!! CTTACTCTTATGTATAATTT+AGG + chr2_1:54915960-54915979 Msa0212770:intron 20.0%
!! AATTTAGAAGATATTGTTGT+GGG - chr2_1:54916082-54916101 None:intergenic 20.0%
!! AAATTTAGAAGATATTGTTG+TGG - chr2_1:54916083-54916102 None:intergenic 20.0%
!!! TTACTTAAAATGAAAAGTAC+AGG - chr2_1:54916322-54916341 None:intergenic 20.0%
!! AAACATTACATCAATCATAT+AGG - chr2_1:54916908-54916927 None:intergenic 20.0%
!!! AACAAATGAATTTGAAATCA+TGG - chr2_1:54917011-54917030 None:intergenic 20.0%
!! GTTTGATATTTATGTAGATT+GGG - chr2_1:54917294-54917313 None:intergenic 20.0%
!! AGTTTGATATTTATGTAGAT+TGG - chr2_1:54917295-54917314 None:intergenic 20.0%
!!! AAAAGCATCATAAAAAAACA+CGG + chr2_1:54917316-54917335 Msa0212770:intron 20.0%
!!! ATAAGCAAAGATTCATTTTA+AGG + chr2_1:54917465-54917484 Msa0212770:intron 20.0%
!! ATAATATAGACCAAATACAT+CGG - chr2_1:54917503-54917522 None:intergenic 20.0%
!!! AAGCAAAAAAATCACTTTTA+AGG - chr2_1:54917554-54917573 None:intergenic 20.0%
!!! TCCTTTTTTTATGAAAAAGA+CGG - chr2_1:54918063-54918082 None:intergenic 20.0%
!! TTTATATTCTTGTCTTACAT+TGG + chr2_1:54918320-54918339 Msa0212770:intron 20.0%
!! ATAACATAATAGCATAAAAC+AGG - chr2_1:54918364-54918383 None:intergenic 20.0%
!! CAAAACTTCATGAAAAATAT+TGG - chr2_1:54918436-54918455 None:intergenic 20.0%
!!! ATATTTTTCATGAAGTTTTG+CGG + chr2_1:54918436-54918455 Msa0212770:intron 20.0%
!!! AAGGACTTGTTTTTTTTTTT+GGG - chr2_1:54918559-54918578 None:intergenic 20.0%
!!! TAAGGACTTGTTTTTTTTTT+TGG - chr2_1:54918560-54918579 None:intergenic 20.0%
!! GAAATACCTTAAATAAGATA+TGG + chr2_1:54918854-54918873 Msa0212770:intron 20.0%
!!! TAAATCAGTTTTTTATTCTG+CGG - chr2_1:54918882-54918901 None:intergenic 20.0%
!! TTTCTTTATCTTCTCAATTT+GGG - chr2_1:54918990-54919009 None:intergenic 20.0%
!! ATTTCTTTATCTTCTCAATT+TGG - chr2_1:54918991-54919010 None:intergenic 20.0%
!!! TGCGTAATTTTTTTTATCTT+TGG + chr2_1:54919285-54919304 Msa0212770:intron 20.0%
!! ACCTATAAAAGAAAAACAAA+AGG + chr2_1:54919443-54919462 Msa0212770:intron 20.0%
!!! TCCTTTTGTTTTTCTTTTAT+AGG - chr2_1:54919447-54919466 None:intergenic 20.0%
!! AAATATCAAACAACTAACTT+TGG - chr2_1:54919578-54919597 None:intergenic 20.0%
!! AAATATCAAACAACTAACTT+TGG - chr2_1:54919578-54919597 None:intergenic 20.0%
!!! AATTTGATTTTAGTTGAACA+AGG + chr2_1:54919790-54919809 Msa0212770:intron 20.0%
!!! ATTTAATATTTTGAGTGAAC+AGG + chr2_1:54919958-54919977 Msa0212770:intron 20.0%
!!! TTAAATTCATGCATTGATAT+GGG + chr2_1:54920171-54920190 Msa0212770:intron 20.0%
!! AAATATCAGTTAGAAATCTT+AGG - chr2_1:54920366-54920385 None:intergenic 20.0%
!! TAACCTCATCTTAAAATATT+CGG - chr2_1:54920701-54920720 None:intergenic 20.0%
!!! ATTTAAGATTCTTATTTGGT+GGG + chr2_1:54922555-54922574 Msa0212770:CDS 20.0%
!! ATTATTGTTAAATCCAATCA+CGG - chr2_1:54923080-54923099 None:intergenic 20.0%
! AAACGTTAAAATGAAGGAAA+GGG - chr2_1:54915068-54915087 None:intergenic 25.0%
! TAGAAGAAACGTTAAAATGA+AGG - chr2_1:54915074-54915093 None:intergenic 25.0%
!!! TTTGTGTTGTTTAATTCATC+CGG + chr2_1:54915365-54915384 Msa0212770:intron 25.0%
!! GAATTATTGTTGTGATGTTT+TGG + chr2_1:54915564-54915583 Msa0212770:intron 25.0%
! AAAAATCGATAATAGACCAA+TGG - chr2_1:54916135-54916154 None:intergenic 25.0%
!!! TTTATTTTTTTTGGGTTTGG+TGG + chr2_1:54916245-54916264 Msa0212770:intron 25.0%
!!! TTATTTTTTTTGGGTTTGGT+GGG + chr2_1:54916246-54916265 Msa0212770:intron 25.0%
!!! GTTCTTTTTTAATAGAGAAC+AGG + chr2_1:54916510-54916529 Msa0212770:CDS 25.0%
!! GAATTTGAAATCATGGAAAA+CGG - chr2_1:54917004-54917023 None:intergenic 25.0%
! TTAACGGAGAAGATAAAATT+TGG + chr2_1:54917258-54917277 Msa0212770:intron 25.0%
! TAACGGAGAAGATAAAATTT+GGG + chr2_1:54917259-54917278 Msa0212770:intron 25.0%
!! AAAGCATCATAAAAAAACAC+GGG + chr2_1:54917317-54917336 Msa0212770:intron 25.0%
! CATTGAATAACTGATATATC+TGG - chr2_1:54917529-54917548 None:intergenic 25.0%
!!! TTTTTGCTTTAAATAGTGAC+CGG + chr2_1:54917565-54917584 Msa0212770:intron 25.0%
! TTACTAAATAATACTTCCTC+CGG - chr2_1:54917587-54917606 None:intergenic 25.0%
!!! GCTGATTCTTTTACTAAATT+TGG + chr2_1:54917912-54917931 Msa0212770:intron 25.0%
!!! ACCGTCTTTTTCATAAAAAA+AGG + chr2_1:54918059-54918078 Msa0212770:intron 25.0%
!! CTTCATGAAAAATATTGGTT+GGG - chr2_1:54918431-54918450 None:intergenic 25.0%
! ACTTCATGAAAAATATTGGT+TGG - chr2_1:54918432-54918451 None:intergenic 25.0%
! AACAAATAGCTTAAGCTTTA+GGG - chr2_1:54918481-54918500 None:intergenic 25.0%
! TAACAAATAGCTTAAGCTTT+AGG - chr2_1:54918482-54918501 None:intergenic 25.0%
!! TAAGCTATTTGTTAAATGCA+TGG + chr2_1:54918488-54918507 Msa0212770:intron 25.0%
!! AAGCTATTTGTTAAATGCAT+GGG + chr2_1:54918489-54918508 Msa0212770:intron 25.0%
! ATCTAAGTATGTTTCATAGA+AGG + chr2_1:54918758-54918777 Msa0212770:intron 25.0%
!! TTTTACTGAAAAACACAGTT+TGG + chr2_1:54919137-54919156 Msa0212770:intron 25.0%
! TTTACTGAAAAACACAGTTT+GGG + chr2_1:54919138-54919157 Msa0212770:intron 25.0%
! AATTCCAAAATTGCACATAT+AGG - chr2_1:54919657-54919676 None:intergenic 25.0%
! ATGTTTACTTCTATTCTTAG+AGG + chr2_1:54920078-54920097 Msa0212770:intron 25.0%
!!! TGACATGTTTTTAGTAATGT+GGG - chr2_1:54920149-54920168 None:intergenic 25.0%
!! GTTAAATTCATGCATTGATA+TGG + chr2_1:54920170-54920189 Msa0212770:intron 25.0%
! ATACATCCTTTAAGTCAAAA+TGG - chr2_1:54920270-54920289 None:intergenic 25.0%
! TACAGTAATCAATAAACTTG+TGG - chr2_1:54920454-54920473 None:intergenic 25.0%
!! CAAGTTTATTGATTACTGTA+CGG + chr2_1:54920454-54920473 Msa0212770:intron 25.0%
! AGTCATAAAACTAATGATTG+AGG + chr2_1:54920576-54920595 Msa0212770:intron 25.0%
!! CTCTAGTATAATGATTTTTC+AGG + chr2_1:54920647-54920666 Msa0212770:intron 25.0%
!! GGACTTTGAATTTTGTAAAT+GGG - chr2_1:54920986-54921005 None:intergenic 25.0%
!! AGGACTTTGAATTTTGTAAA+TGG - chr2_1:54920987-54921006 None:intergenic 25.0%
! AGACATAAATCAACTCAAAA+AGG + chr2_1:54921768-54921787 Msa0212770:CDS 25.0%
! ATACTATCCTTATGAAAACA+AGG - chr2_1:54922439-54922458 None:intergenic 25.0%
!! CATTTAAGATTCTTATTTGG+TGG + chr2_1:54922554-54922573 Msa0212770:CDS 25.0%
! AAGAACAGATACCAAAATAA+GGG - chr2_1:54922753-54922772 None:intergenic 25.0%
! TCATGCAATACTTAGTAATA+AGG - chr2_1:54922874-54922893 None:intergenic 25.0%
! TTATTGTTAAATCCAATCAC+GGG - chr2_1:54923079-54923098 None:intergenic 25.0%
! ATTGGATTTAACAATAATGC+TGG + chr2_1:54923082-54923101 Msa0212770:CDS 25.0%
AACCTATATCTCTACTTTCT+AGG + chr2_1:54914968-54914987 Msa0212770:five_prime_UTR 30.0%
ACCTATATCTCTACTTTCTA+GGG + chr2_1:54914969-54914988 Msa0212770:five_prime_UTR 30.0%
AACGTTAAAATGAAGGAAAG+GGG - chr2_1:54915067-54915086 None:intergenic 30.0%
GAAACGTTAAAATGAAGGAA+AGG - chr2_1:54915069-54915088 None:intergenic 30.0%
!! TTGTGTTGTTTAATTCATCC+GGG + chr2_1:54915366-54915385 Msa0212770:intron 30.0%
TCAAACAAATCAGATCTACA+TGG - chr2_1:54915392-54915411 None:intergenic 30.0%
AGTGCTTGTTTATACAAACA+GGG - chr2_1:54915626-54915645 None:intergenic 30.0%
AAGTGCTTGTTTATACAAAC+AGG - chr2_1:54915627-54915646 None:intergenic 30.0%
! CTTATTTCAATTAGCTCTCT+AGG - chr2_1:54915747-54915766 None:intergenic 30.0%
AACAACTTATGACATGTTCA+TGG - chr2_1:54915780-54915799 None:intergenic 30.0%
TCTAATAAGCTAATCCAAAC+AGG + chr2_1:54915851-54915870 Msa0212770:intron 30.0%
!! TGATGATGTTTTTGTTATGC+AGG + chr2_1:54916367-54916386 Msa0212770:intron 30.0%
! TATCACACTTTTCTGTATTC+TGG + chr2_1:54916761-54916780 Msa0212770:intron 30.0%
ACATCAATCATATAGGAAGT+AGG - chr2_1:54916901-54916920 None:intergenic 30.0%
!! AAAAAAAGTATTACTCCCTC+CGG + chr2_1:54917434-54917453 Msa0212770:intron 30.0%
TCTTTGCTTATAATAGTGAC+CGG - chr2_1:54917456-54917475 None:intergenic 30.0%
CATTGAATAACCGATGTATT+TGG + chr2_1:54917490-54917509 Msa0212770:intron 30.0%
TATTAAGCTTTCCCGTTATA+AGG + chr2_1:54917857-54917876 Msa0212770:intron 30.0%
!! AAATGACTCTAAAAGCATCT+AGG - chr2_1:54918014-54918033 None:intergenic 30.0%
! ATTTGTGTTTCTGTAGTGTT+TGG + chr2_1:54918030-54918049 Msa0212770:intron 30.0%
! TTTGTGTTTCTGTAGTGTTT+GGG + chr2_1:54918031-54918050 Msa0212770:intron 30.0%
AAGTGATTGGCATTTATTCT+TGG + chr2_1:54918389-54918408 Msa0212770:intron 30.0%
AGTGATTGGCATTTATTCTT+GGG + chr2_1:54918390-54918409 Msa0212770:intron 30.0%
! ACAAATAGCTTAAGCTTTAG+GGG - chr2_1:54918480-54918499 None:intergenic 30.0%
!! ATGCTATAAGAGGTATTATC+GGG - chr2_1:54918725-54918744 None:intergenic 30.0%
!! GATGCTATAAGAGGTATTAT+CGG - chr2_1:54918726-54918745 None:intergenic 30.0%
AAGTATGTTTCATAGAAGGA+TGG + chr2_1:54918762-54918781 Msa0212770:intron 30.0%
TGGGGATAAAAAATAAGGAA+CGG - chr2_1:54918790-54918809 None:intergenic 30.0%
!!! TCCTTATTTTTTATCCCCAT+TGG + chr2_1:54918791-54918810 Msa0212770:intron 30.0%
TCCAATGGGGATAAAAAATA+AGG - chr2_1:54918795-54918814 None:intergenic 30.0%
!!! TTATTTTTTATCCCCATTGG+AGG + chr2_1:54918794-54918813 Msa0212770:intron 30.0%
!! TTCTTTTTATGGTTGGTTGA+AGG - chr2_1:54918917-54918936 None:intergenic 30.0%
TTCAACCAACCATAAAAAGA+AGG + chr2_1:54918916-54918935 Msa0212770:intron 30.0%
TCAACCAACCATAAAAAGAA+GGG + chr2_1:54918917-54918936 Msa0212770:intron 30.0%
! ATGTGTGTAATTGTGTTTTC+TGG - chr2_1:54918962-54918981 None:intergenic 30.0%
!!! TTGTGTGTTTTAGAGAAAGA+AGG + chr2_1:54919162-54919181 Msa0212770:intron 30.0%
!!! TGTTTTAGAGAAAGAAGGAT+TGG + chr2_1:54919167-54919186 Msa0212770:intron 30.0%
! AGTTTCACAACCTATTTTCT+CGG + chr2_1:54919323-54919342 Msa0212770:intron 30.0%
!! TTTTGAGTGAACAGGAAAAT+TGG + chr2_1:54919966-54919985 Msa0212770:intron 30.0%
AGTCCTTGAATTTAGCAAAA+CGG + chr2_1:54920011-54920030 Msa0212770:intron 30.0%
! TTTCCGTTTTGCTAAATTCA+AGG - chr2_1:54920017-54920036 None:intergenic 30.0%
TTGTAACACATCAGTCAAAA+TGG + chr2_1:54920051-54920070 Msa0212770:intron 30.0%
ATGACATGTTAAACGAACAT+GGG + chr2_1:54920108-54920127 Msa0212770:intron 30.0%
TTTAGTAATGTGGGATCTAT+GGG - chr2_1:54920140-54920159 None:intergenic 30.0%
! TTTTAGTAATGTGGGATCTA+TGG - chr2_1:54920141-54920160 None:intergenic 30.0%
!!! GTGACATGTTTTTAGTAATG+TGG - chr2_1:54920150-54920169 None:intergenic 30.0%
! AGTTATTGTAGTTTGCAAAC+TGG - chr2_1:54920296-54920315 None:intergenic 30.0%
ATCAGAGATTCAGAGTATAA+TGG - chr2_1:54920391-54920410 None:intergenic 30.0%
!!! TTACTGTACGGTTTTTAAGT+AGG + chr2_1:54920466-54920485 Msa0212770:intron 30.0%
AACTTTCTCTAGTCAAGAAA+AGG + chr2_1:54920490-54920509 Msa0212770:intron 30.0%
! TTTTATGACTACTTGATGCA+TGG - chr2_1:54920566-54920585 None:intergenic 30.0%
TAAAACTAATGATTGAGGAG+AGG + chr2_1:54920581-54920600 Msa0212770:intron 30.0%
! TTTAAGATCATTCATCTGAG+AGG + chr2_1:54920620-54920639 Msa0212770:intron 30.0%
!!! GTATAATGATTTTTCAGGTC+TGG + chr2_1:54920652-54920671 Msa0212770:intron 30.0%
!!! CATCCGAATATTTTAAGATG+AGG + chr2_1:54920695-54920714 Msa0212770:intron 30.0%
TCAAAGGGACTATATAATGT+TGG + chr2_1:54920735-54920754 Msa0212770:intron 30.0%
CAAAGGGACTATATAATGTT+GGG + chr2_1:54920736-54920755 Msa0212770:intron 30.0%
AAAGAATGTCTACAGTGAAA+GGG - chr2_1:54920790-54920809 None:intergenic 30.0%
AAAAGAATGTCTACAGTGAA+AGG - chr2_1:54920791-54920810 None:intergenic 30.0%
GTTCAATTGATGGAAAAAGA+TGG + chr2_1:54920935-54920954 Msa0212770:CDS 30.0%
ATATGAAGATGTTCTGTACA+AGG - chr2_1:54921007-54921026 None:intergenic 30.0%
TATGAAGATGTTCTGTACAA+GGG - chr2_1:54921006-54921025 None:intergenic 30.0%
ATATGAAGATGTTCTGTACA+AGG - chr2_1:54921007-54921026 None:intergenic 30.0%
!! TTTTTCTAGTGAGCCAATAT+TGG + chr2_1:54921242-54921261 Msa0212770:CDS 30.0%
AAGGTGGGGATTAAATAAAT+GGG - chr2_1:54921712-54921731 None:intergenic 30.0%
AAAGGTGGGGATTAAATAAA+TGG - chr2_1:54921713-54921732 None:intergenic 30.0%
AAAGCAGTTCATTACAGTTT+CGG + chr2_1:54921847-54921866 Msa0212770:CDS 30.0%
TGGTAATAGTCATCTATGTA+TGG - chr2_1:54921945-54921964 None:intergenic 30.0%
! TGAAGGAAGTTCCTTTATTT+GGG - chr2_1:54922027-54922046 None:intergenic 30.0%
! TTTCATTTTCGTCTATTCGT+CGG + chr2_1:54922105-54922124 Msa0212770:CDS 30.0%
ATAAGAATCTTAAATGCCGA+AGG - chr2_1:54922550-54922569 None:intergenic 30.0%
! CGGCATTTAAGATTCTTATT+TGG + chr2_1:54922551-54922570 Msa0212770:CDS 30.0%
CAAGAACAGATACCAAAATA+AGG - chr2_1:54922754-54922773 None:intergenic 30.0%
ATTACCCATATTATAGTTGC+AGG - chr2_1:54922813-54922832 None:intergenic 30.0%
!!! CATTTGGTGCATTTTGTATA+AGG - chr2_1:54922925-54922944 None:intergenic 30.0%
TATACAAAATGCACCAAATG+TGG + chr2_1:54922925-54922944 Msa0212770:CDS 30.0%
AATCCAGTAATAACTTCCTT+TGG - chr2_1:54923039-54923058 None:intergenic 30.0%
ACCCTAGAAAGTAGAGATAT+AGG - chr2_1:54914973-54914992 None:intergenic 35.0%
TGATAGGAATTTAGCACATG+GGG - chr2_1:54915036-54915055 None:intergenic 35.0%
GTGATAGGAATTTAGCACAT+GGG - chr2_1:54915037-54915056 None:intergenic 35.0%
TGTGATAGGAATTTAGCACA+TGG - chr2_1:54915038-54915057 None:intergenic 35.0%
TTCAGCGTTTACATCTCAAA+GGG + chr2_1:54915167-54915186 Msa0212770:five_prime_UTR 35.0%
!! TCACTACTCCTTCGTTTTTA+TGG + chr2_1:54915204-54915223 Msa0212770:exon 35.0%
CATATCCACCATAAAAACGA+AGG - chr2_1:54915215-54915234 None:intergenic 35.0%
!!! CTTCGTTTTTATGGTGGATA+TGG + chr2_1:54915213-54915232 Msa0212770:exon 35.0%
!!! GTTTTTATGGTGGATATGGA+TGG + chr2_1:54915217-54915236 Msa0212770:exon 35.0%
!!! GATTTTTTGCATCTGTGTGT+TGG + chr2_1:54915896-54915915 Msa0212770:intron 35.0%
CGTATTGTTTGTACTTCCAT+TGG + chr2_1:54916116-54916135 Msa0212770:intron 35.0%
!! TGATGTTTTTGTTATGCAGG+AGG + chr2_1:54916370-54916389 Msa0212770:intron 35.0%
GCATCACAATATGCATTCTT+TGG + chr2_1:54916406-54916425 Msa0212770:CDS 35.0%
AGACTCAAAAGTTGGCAAAT+GGG - chr2_1:54916479-54916498 None:intergenic 35.0%
TAGACTCAAAAGTTGGCAAA+TGG - chr2_1:54916480-54916499 None:intergenic 35.0%
TCCTCATTAGACTCAAAAGT+TGG - chr2_1:54916487-54916506 None:intergenic 35.0%
!! AACTTTTGAGTCTAATGAGG+AGG + chr2_1:54916486-54916505 Msa0212770:CDS 35.0%
TTTGTCTCTCAAAATTCACG+TGG + chr2_1:54916558-54916577 Msa0212770:intron 35.0%
ATATGTGAATCGCATGAGAA+AGG - chr2_1:54916618-54916637 None:intergenic 35.0%
TCTCATGCGATTCACATATA+TGG + chr2_1:54916619-54916638 Msa0212770:intron 35.0%
AAAGTTTCTCAGTTTCCATG+AGG + chr2_1:54917037-54917056 Msa0212770:intron 35.0%
TCTCTCATAGTTGACAAATC+TGG - chr2_1:54917091-54917110 None:intergenic 35.0%
!! GAATCATATTTTTGCAGCTG+CGG + chr2_1:54917182-54917201 Msa0212770:intron 35.0%
ATAAACCCTGTAACAAACTC+CGG - chr2_1:54917212-54917231 None:intergenic 35.0%
! CAGGGTTTATGTTGTCTTTT+AGG + chr2_1:54917222-54917241 Msa0212770:intron 35.0%
!!! GTCTTTTAGGTTTAGCTACT+AGG + chr2_1:54917235-54917254 Msa0212770:intron 35.0%
AGGTTTAGCTACTAGGTTAA+CGG + chr2_1:54917242-54917261 Msa0212770:intron 35.0%
AGATAAAATTTGGGCCCTTA+AGG + chr2_1:54917268-54917287 Msa0212770:intron 35.0%
TTATGTAGATTGGGCCTTAA+GGG - chr2_1:54917285-54917304 None:intergenic 35.0%
TTTATGTAGATTGGGCCTTA+AGG - chr2_1:54917286-54917305 None:intergenic 35.0%
! TAAATGCCCAAGGTATTCAA+AGG - chr2_1:54917343-54917362 None:intergenic 35.0%
ATACCTTGGGCATTTAGAAA+AGG + chr2_1:54917347-54917366 Msa0212770:intron 35.0%
GAAAAGGCAATAGTAGTTAC+TGG + chr2_1:54917363-54917382 Msa0212770:intron 35.0%
AAGGCAAGAGAGGAAAAATT+AGG - chr2_1:54917963-54917982 None:intergenic 35.0%
AGAATTTCAATCTGCCAACA+AGG - chr2_1:54917982-54918001 None:intergenic 35.0%
! TTGTGTTTCTGTAGTGTTTG+GGG + chr2_1:54918032-54918051 Msa0212770:intron 35.0%
TGGGATCGACAACTATATTT+GGG + chr2_1:54918261-54918280 Msa0212770:intron 35.0%
ATTCTTGTCTTACATTGGTC+AGG + chr2_1:54918325-54918344 Msa0212770:intron 35.0%
! TGAAAAATATTGGTTGGGTC+AGG - chr2_1:54918426-54918445 None:intergenic 35.0%
! ATGCTACTTGATGTTTGACT+TGG + chr2_1:54918529-54918548 Msa0212770:intron 35.0%
! TGCTACTTGATGTTTGACTT+GGG + chr2_1:54918530-54918549 Msa0212770:intron 35.0%
GGGGATAAAAAATAAGGAAC+GGG - chr2_1:54918789-54918808 None:intergenic 35.0%
! GCGGTACCATATCTTATTTA+AGG - chr2_1:54918863-54918882 None:intergenic 35.0%
CAACCAACCATAAAAAGAAG+GGG + chr2_1:54918918-54918937 Msa0212770:intron 35.0%
AACCAACCATAAAAAGAAGG+GGG + chr2_1:54918919-54918938 Msa0212770:intron 35.0%
ATGGCTGAAAAAATGTGAGA+TGG + chr2_1:54919058-54919077 Msa0212770:intron 35.0%
AGGAATTAAATTCCCAGGAA+AGG - chr2_1:54919381-54919400 None:intergenic 35.0%
TCCTGGGAATTTAATTCCTA+TGG + chr2_1:54919382-54919401 Msa0212770:intron 35.0%
ACCATAGGAATTAAATTCCC+AGG - chr2_1:54919386-54919405 None:intergenic 35.0%
AACTTAGCATTAGCAACCAT+AGG - chr2_1:54919401-54919420 None:intergenic 35.0%
!! TCTGATTAGCTTGCTTTCTT+AGG + chr2_1:54919497-54919516 Msa0212770:intron 35.0%
! GCTACCTATATGTGCAATTT+TGG + chr2_1:54919650-54919669 Msa0212770:intron 35.0%
TCGTTTAACATGTCATGTCT+TGG - chr2_1:54920104-54920123 None:intergenic 35.0%
CATGACATGTTAAACGAACA+TGG + chr2_1:54920107-54920126 Msa0212770:intron 35.0%
TGACATGTTAAACGAACATG+GGG + chr2_1:54920109-54920128 Msa0212770:intron 35.0%
TTAGTAATGTGGGATCTATG+GGG - chr2_1:54920139-54920158 None:intergenic 35.0%
GGCACACTAAATAAACATGT+GGG - chr2_1:54920210-54920229 None:intergenic 35.0%
TGGCACACTAAATAAACATG+TGG - chr2_1:54920211-54920230 None:intergenic 35.0%
TAGAAATCTTAGGAGCGAAT+AGG - chr2_1:54920356-54920375 None:intergenic 35.0%
!!! GTTGAGAGTTTTTTCAACCA+TGG + chr2_1:54920423-54920442 Msa0212770:intron 35.0%
ATAAACTTGTGGCAAAACCA+TGG - chr2_1:54920443-54920462 None:intergenic 35.0%
TGATGCATGGCAATAATGAA+TGG - chr2_1:54920553-54920572 None:intergenic 35.0%
TATGTGTCTCTTGTGTTCAA+AGG + chr2_1:54920719-54920738 Msa0212770:intron 35.0%
ATGTGTCTCTTGTGTTCAAA+GGG + chr2_1:54920720-54920739 Msa0212770:intron 35.0%
AAGAATGTCTACAGTGAAAG+GGG - chr2_1:54920789-54920808 None:intergenic 35.0%
AAAGAGACGATGTTCATAAC+TGG + chr2_1:54920884-54920903 Msa0212770:CDS 35.0%
GATAGTGAAGGTTCAATTGA+TGG + chr2_1:54920925-54920944 Msa0212770:CDS 35.0%
GAAGACTTCTGTACCAATAT+TGG - chr2_1:54921258-54921277 None:intergenic 35.0%
TGTGATATGGAATGTTCAAG+TGG - chr2_1:54921344-54921363 None:intergenic 35.0%
TTGAACATTCCATATCACAC+TGG + chr2_1:54921345-54921364 Msa0212770:CDS 35.0%
!! AGTTGAGTGGATTAAACCTT+GGG + chr2_1:54921430-54921449 Msa0212770:CDS 35.0%
! TCTGTATTCGTTGACTAAGA+GGG - chr2_1:54921500-54921519 None:intergenic 35.0%
! TTCTGTATTCGTTGACTAAG+AGG - chr2_1:54921501-54921520 None:intergenic 35.0%
TCAACGAATACAGAACCAAT+TGG + chr2_1:54921506-54921525 Msa0212770:CDS 35.0%
CAACAACTACAGCTTCATAA+TGG + chr2_1:54921588-54921607 Msa0212770:CDS 35.0%
!! GTGATCATACTTGCTATTGA+CGG - chr2_1:54921748-54921767 None:intergenic 35.0%
TAGTCATCGTTTATCACATC+AGG + chr2_1:54921797-54921816 Msa0212770:CDS 35.0%
AGTCATCGTTTATCACATCA+GGG + chr2_1:54921798-54921817 Msa0212770:CDS 35.0%
! ATGAACTGCTTTCACTCTTT+TGG - chr2_1:54921839-54921858 None:intergenic 35.0%
TTCATCACTTGTCATATGCT+TGG - chr2_1:54921874-54921893 None:intergenic 35.0%
ATAGATGACTATTACCACCA+AGG + chr2_1:54921948-54921967 Msa0212770:CDS 35.0%
TCTTGCAAAAAAACCTTCTG+TGG + chr2_1:54921974-54921993 Msa0212770:CDS 35.0%
!!! TGTTTTAACTTAGCCACAGA+AGG - chr2_1:54921990-54922009 None:intergenic 35.0%
! GAAGTTCCTTTATTTGGGTT+GGG - chr2_1:54922022-54922041 None:intergenic 35.0%
GTGAAGGAAGTTCCTTTATT+TGG - chr2_1:54922028-54922047 None:intergenic 35.0%
AAATGCATGAGGATCATTAC+TGG - chr2_1:54922060-54922079 None:intergenic 35.0%
!!! AGGATGACCTTGTTTTCATA+AGG + chr2_1:54922429-54922448 Msa0212770:CDS 35.0%
TATCTTCAATTGCTTCTTCC+TGG + chr2_1:54922491-54922510 Msa0212770:CDS 35.0%
! TTTTGGTATCTGTTCTTGAG+AGG + chr2_1:54922756-54922775 Msa0212770:CDS 35.0%
TTTGGTATCTGTTCTTGAGA+GGG + chr2_1:54922757-54922776 Msa0212770:CDS 35.0%
! ATATGGGTAATCGTTCCTTT+TGG + chr2_1:54922822-54922841 Msa0212770:CDS 35.0%
GCCTCATTTGATGAATTCTT+TGG + chr2_1:54922848-54922867 Msa0212770:CDS 35.0%
GCCAAAGAATTCATCAAATG+AGG - chr2_1:54922852-54922871 None:intergenic 35.0%
! TGGTGCATTTTGTATAAGGA+GGG - chr2_1:54922921-54922940 None:intergenic 35.0%
! TTGGTGCATTTTGTATAAGG+AGG - chr2_1:54922922-54922941 None:intergenic 35.0%
TGCTGCTAATGCAATTAGTA+AGG + chr2_1:54922964-54922983 Msa0212770:CDS 35.0%
GGATTTAACAATAATGCTGG+AGG + chr2_1:54923085-54923104 Msa0212770:CDS 35.0%
CTTCAGCGTTTACATCTCAA+AGG + chr2_1:54915166-54915185 Msa0212770:five_prime_UTR 40.0%
!! CTACTCCTTCGTTTTTATGG+TGG + chr2_1:54915207-54915226 Msa0212770:exon 40.0%
!!! ATGGTGGATATGGATGGTTT+TGG + chr2_1:54915223-54915242 Msa0212770:CDS 40.0%
!!! ATATGGATGGTTTTGGAGGT+GGG + chr2_1:54915230-54915249 Msa0212770:CDS 40.0%
! TTCTGGAGATCTTAGGCAAT+TGG + chr2_1:54915276-54915295 Msa0212770:CDS 40.0%
TCTGGAGATCTTAGGCAATT+GGG + chr2_1:54915277-54915296 Msa0212770:CDS 40.0%
TTGCATCAGAAACCTGAAAC+AGG - chr2_1:54915310-54915329 None:intergenic 40.0%
GTCATAAATAAGGGCCTGTT+TGG - chr2_1:54915868-54915887 None:intergenic 40.0%
! TTTTTGCATCTGTGTGTTGG+AGG + chr2_1:54915899-54915918 Msa0212770:intron 40.0%
! TTTTGCATCTGTGTGTTGGA+GGG + chr2_1:54915900-54915919 Msa0212770:intron 40.0%
!! GGACAGTTTAATTTGCCACA+AGG + chr2_1:54915981-54916000 Msa0212770:intron 40.0%
! ACTATAACCTAAGCACTGTC+TGG - chr2_1:54916012-54916031 None:intergenic 40.0%
!! TTTGGGTTTGGTGGGAATTA+TGG + chr2_1:54916254-54916273 Msa0212770:intron 40.0%
!! GCCAACTTTTGAGTCTAATG+AGG + chr2_1:54916483-54916502 Msa0212770:CDS 40.0%
TCGCATGAGAAAGGAAAAGA+GGG - chr2_1:54916609-54916628 None:intergenic 40.0%
ATCGCATGAGAAAGGAAAAG+AGG - chr2_1:54916610-54916629 None:intergenic 40.0%
GCAAAGTGAGAGTGAATGTT+AGG - chr2_1:54916661-54916680 None:intergenic 40.0%
AACATTCACTCTCACTTTGC+AGG + chr2_1:54916661-54916680 Msa0212770:intron 40.0%
! ACGATCTTACAACCACCTTT+TGG + chr2_1:54916714-54916733 Msa0212770:CDS 40.0%
! TCTTACAACCACCTTTTGGA+AGG + chr2_1:54916718-54916737 Msa0212770:CDS 40.0%
CAACATCCTTACCTTCCAAA+AGG - chr2_1:54916732-54916751 None:intergenic 40.0%
! CACACTTTTCTGTATTCTGG+AGG + chr2_1:54916764-54916783 Msa0212770:intron 40.0%
CTTGTTTCAGTTCTTCCTCA+TGG - chr2_1:54917055-54917074 None:intergenic 40.0%
GGAAGAACTGAAACAAGTCA+CGG + chr2_1:54917058-54917077 Msa0212770:intron 40.0%
GAAGAACTGAAACAAGTCAC+GGG + chr2_1:54917059-54917078 Msa0212770:intron 40.0%
AGTGCAACTGAAACAAGTCA+CGG + chr2_1:54917129-54917148 Msa0212770:intron 40.0%
TAAACCCTGTAACAAACTCC+GGG - chr2_1:54917211-54917230 None:intergenic 40.0%
! TTGCCTTTTCTAAATGCCCA+AGG - chr2_1:54917353-54917372 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr2_1:54917452-54917471 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr2_1:54917453-54917472 None:intergenic 40.0%
! TTGCTTTAAATAGTGACCGG+AGG + chr2_1:54917568-54917587 Msa0212770:intron 40.0%
! TCCTTAGGTACTGTTTCTTG+AGG + chr2_1:54917805-54917824 Msa0212770:intron 40.0%
TCCTCAAGAAACAGTACCTA+AGG - chr2_1:54917809-54917828 None:intergenic 40.0%
CACATGAGCAACCTTATAAC+GGG - chr2_1:54917871-54917890 None:intergenic 40.0%
GCACATGAGCAACCTTATAA+CGG - chr2_1:54917872-54917891 None:intergenic 40.0%
! TTTTTCCTCTCTTGCCTTGT+TGG + chr2_1:54917965-54917984 Msa0212770:intron 40.0%
TCTGCATGTTATCCCAGTTT+CGG + chr2_1:54918217-54918236 Msa0212770:intron 40.0%
CTGGGATCGACAACTATATT+TGG + chr2_1:54918260-54918279 Msa0212770:intron 40.0%
GATCGACAACTATATTTGGG+TGG + chr2_1:54918264-54918283 Msa0212770:intron 40.0%
! ACTATATTTGGGTGGTGGTT+TGG + chr2_1:54918272-54918291 Msa0212770:intron 40.0%
ATTTATTCTTGGGCTTTGCC+TGG + chr2_1:54918400-54918419 Msa0212770:intron 40.0%
TGAAGGGTGGTGATATGATA+AGG - chr2_1:54918578-54918597 None:intergenic 40.0%
!! TTAAGGGTACCCAAAGTACT+TGG - chr2_1:54918663-54918682 None:intergenic 40.0%
CTCTTATAGCATCTCCAGTA+GGG + chr2_1:54918733-54918752 Msa0212770:intron 40.0%
TCTTATAGCATCTCCAGTAG+GGG + chr2_1:54918734-54918753 Msa0212770:intron 40.0%
ACATACTTAGATACCCCTAC+TGG - chr2_1:54918750-54918769 None:intergenic 40.0%
ACCAACCATAAAAAGAAGGG+GGG + chr2_1:54918920-54918939 Msa0212770:intron 40.0%
ATGGAAGCGAAATTGAGTGT+GGG + chr2_1:54919077-54919096 Msa0212770:intron 40.0%
GCATTCATTGCCGAGAAAAT+AGG - chr2_1:54919336-54919355 None:intergenic 40.0%
! TTTTCCCTTTTGCCTTTCCT+GGG + chr2_1:54919366-54919385 Msa0212770:intron 40.0%
AATTCCCAGGAAAGGCAAAA+GGG - chr2_1:54919373-54919392 None:intergenic 40.0%
AAATTCCCAGGAAAGGCAAA+AGG - chr2_1:54919374-54919393 None:intergenic 40.0%
ACTGCTTTACTCACTTTCTC+TGG - chr2_1:54919861-54919880 None:intergenic 40.0%
TAGCAGCAGAAGTTAACAGA+GGG + chr2_1:54920243-54920262 Msa0212770:intron 40.0%
!!! GAGGGACCATTTTGACTTAA+AGG + chr2_1:54920261-54920280 Msa0212770:intron 40.0%
AGAATGTCTACAGTGAAAGG+GGG - chr2_1:54920788-54920807 None:intergenic 40.0%
CAGATGTAGAATCTGGATAG+TGG - chr2_1:54920855-54920874 None:intergenic 40.0%
TCCAGATTCTACATCTGATC+TGG + chr2_1:54920858-54920877 Msa0212770:intron 40.0%
! CAGAATGCGTATGATAGTGA+AGG + chr2_1:54920913-54920932 Msa0212770:CDS 40.0%
TAAATGGGCAAGAGAAGACT+GGG - chr2_1:54920971-54920990 None:intergenic 40.0%
TGATTCGTGTAAGTGTGGAA+TGG - chr2_1:54921169-54921188 None:intergenic 40.0%
TTCATATCCCGACAAACAAC+AGG + chr2_1:54921209-54921228 Msa0212770:CDS 40.0%
! AGTAAGCTCCTGTTGTTTGT+CGG - chr2_1:54921220-54921239 None:intergenic 40.0%
!! CAGTTGAGTGGATTAAACCT+TGG + chr2_1:54921429-54921448 Msa0212770:CDS 40.0%
TTAAACCTTGGGTCACACTT+TGG + chr2_1:54921441-54921460 Msa0212770:CDS 40.0%
AACACACGACAATATCCTAC+TGG + chr2_1:54921468-54921487 Msa0212770:CDS 40.0%
! CTGTATTCGTTGACTAAGAG+GGG - chr2_1:54921499-54921518 None:intergenic 40.0%
CAGCATATTACTAAGGAGGT+TGG - chr2_1:54921565-54921584 None:intergenic 40.0%
GTTGCTGCAGCATATTACTA+AGG - chr2_1:54921572-54921591 None:intergenic 40.0%
TGCAATTGAGTCATCAAGTG+AGG - chr2_1:54921624-54921643 None:intergenic 40.0%
GGGGATTAAATAAATGGGAC+TGG - chr2_1:54921707-54921726 None:intergenic 40.0%
!!! GTTTTTTTGCAAGACGACCT+TGG - chr2_1:54921968-54921987 None:intergenic 40.0%
!! TTTATTTGGGTTGGGCAGAA+AGG - chr2_1:54922014-54922033 None:intergenic 40.0%
TTTCTGCCCAACCCAAATAA+AGG + chr2_1:54922013-54922032 Msa0212770:CDS 40.0%
! GGAAGTTCCTTTATTTGGGT+TGG - chr2_1:54922023-54922042 None:intergenic 40.0%
TGATCCTCATGCATTTCTTC+AGG + chr2_1:54922064-54922083 Msa0212770:CDS 40.0%
TCAACCTGAAGAAATGCATG+AGG - chr2_1:54922071-54922090 None:intergenic 40.0%
!! TTTCTTCAGGTTGATTCCCT+AGG + chr2_1:54922077-54922096 Msa0212770:CDS 40.0%
!! TTCTTCAGGTTGATTCCCTA+GGG + chr2_1:54922078-54922097 Msa0212770:CDS 40.0%
TCTTTAGATCAGAGCTACCA+GGG - chr2_1:54922172-54922191 None:intergenic 40.0%
ATCTTTAGATCAGAGCTACC+AGG - chr2_1:54922173-54922192 None:intergenic 40.0%
GAACGCAATTAAGACGAAGA+AGG + chr2_1:54922321-54922340 Msa0212770:CDS 40.0%
AAGTAGCTAGTCCTTCCAAT+AGG - chr2_1:54922352-54922371 None:intergenic 40.0%
ACTAGCTACTTCACTTCAAC+TGG + chr2_1:54922361-54922380 Msa0212770:CDS 40.0%
AAGGATAGTATCTGTCCCTA+AGG + chr2_1:54922448-54922467 Msa0212770:CDS 40.0%
AGGATAGTATCTGTCCCTAA+GGG + chr2_1:54922449-54922468 Msa0212770:CDS 40.0%
GCAATTGAAGATACTTCGCA+AGG - chr2_1:54922484-54922503 None:intergenic 40.0%
TCATGCAAACTATCCGCATA+AGG - chr2_1:54922523-54922542 None:intergenic 40.0%
GAATCTTAAATGCCGAAGGA+CGG - chr2_1:54922546-54922565 None:intergenic 40.0%
!! AGATGGTGCTTCCCTTATTT+TGG + chr2_1:54922739-54922758 Msa0212770:CDS 40.0%
AGCAGCCTGCAACTATAATA+TGG + chr2_1:54922805-54922824 Msa0212770:CDS 40.0%
GCAGCCTGCAACTATAATAT+GGG + chr2_1:54922806-54922825 Msa0212770:CDS 40.0%
GATCCAATGTCATCCACATT+TGG - chr2_1:54922941-54922960 None:intergenic 40.0%
CCAGTAATAACTTCCTTTGG+CGG - chr2_1:54923036-54923055 None:intergenic 40.0%
TTAGCACATGGGGTTGGATT+TGG - chr2_1:54915026-54915045 None:intergenic 45.0%
AGGAATTTAGCACATGGGGT+TGG - chr2_1:54915032-54915051 None:intergenic 45.0%
GAAAGGGGAAGATCTGTGAT+AGG - chr2_1:54915052-54915071 None:intergenic 45.0%
!!! GTGGATATGGATGGTTTTGG+AGG + chr2_1:54915226-54915245 Msa0212770:CDS 45.0%
!!! GATATGGATGGTTTTGGAGG+TGG + chr2_1:54915229-54915248 Msa0212770:CDS 45.0%
!!! TATGGATGGTTTTGGAGGTG+GGG + chr2_1:54915231-54915250 Msa0212770:CDS 45.0%
CTAAGATCTCCAGAACTAGG+AGG - chr2_1:54915271-54915290 None:intergenic 45.0%
!! CTCCTAGTTCTGGAGATCTT+AGG + chr2_1:54915269-54915288 Msa0212770:CDS 45.0%
TGCCTAAGATCTCCAGAACT+AGG - chr2_1:54915274-54915293 None:intergenic 45.0%
TTGGGTCATGTTCCTGTTTC+AGG + chr2_1:54915295-54915314 Msa0212770:CDS 45.0%
CAAATCAGATCTACATGGCC+CGG - chr2_1:54915387-54915406 None:intergenic 45.0%
TTTGCATCTGTGTGTTGGAG+GGG + chr2_1:54915901-54915920 Msa0212770:intron 45.0%
TGGTGGGAATTATGGTCACA+TGG + chr2_1:54916262-54916281 Msa0212770:intron 45.0%
GGTGGGAATTATGGTCACAT+GGG + chr2_1:54916263-54916282 Msa0212770:intron 45.0%
CTTTGGTAAAGATGCTGTCC+AGG + chr2_1:54916423-54916442 Msa0212770:CDS 45.0%
TCTCTCAAAATTCACGTGGC+TGG + chr2_1:54916562-54916581 Msa0212770:intron 45.0%
CGCATGAGAAAGGAAAAGAG+GGG - chr2_1:54916608-54916627 None:intergenic 45.0%
!! CAACCACCTTTTGGAAGGTA+AGG + chr2_1:54916723-54916742 Msa0212770:intron 45.0%
CATCCTTACCTTCCAAAAGG+TGG - chr2_1:54916729-54916748 None:intergenic 45.0%
GAAATCATGGAAAACGGTGC+AGG - chr2_1:54916998-54917017 None:intergenic 45.0%
ACTGAAACAAGTCACGGGTT+TGG + chr2_1:54917064-54917083 Msa0212770:intron 45.0%
GTGCAACTGAAACAAGTCAC+GGG + chr2_1:54917130-54917149 Msa0212770:intron 45.0%
ACTGAAACAAGTCACGGGTT+TGG + chr2_1:54917064-54917083 Msa0212770:intron 45.0%
AACTGGGATAACATGCAGAG+CGG - chr2_1:54918216-54918235 None:intergenic 45.0%
CGACAACTATATTTGGGTGG+TGG + chr2_1:54918267-54918286 Msa0212770:intron 45.0%
ATACGATTGTTAGTTCCCCG+AGG - chr2_1:54918298-54918317 None:intergenic 45.0%
! AGGCTCAACGGAGTACTTAA+GGG - chr2_1:54918679-54918698 None:intergenic 45.0%
CTAAGTATCACCACGTTGAG+AGG - chr2_1:54918699-54918718 None:intergenic 45.0%
CTCTCAACGTGGTGATACTT+AGG + chr2_1:54918697-54918716 Msa0212770:intron 45.0%
CCTACTGGAGATGCTATAAG+AGG - chr2_1:54918735-54918754 None:intergenic 45.0%
CCTCTTATAGCATCTCCAGT+AGG + chr2_1:54918732-54918751 Msa0212770:intron 45.0%
GCTATCAAATTCCCCACATC+AGG - chr2_1:54918822-54918841 None:intergenic 45.0%
! CTTTGCCCCCCTTCTTTTTA+TGG - chr2_1:54918928-54918947 None:intergenic 45.0%
GATGGAAGCGAAATTGAGTG+TGG + chr2_1:54919076-54919095 Msa0212770:intron 45.0%
TGGAAGCGAAATTGAGTGTG+GGG + chr2_1:54919078-54919097 Msa0212770:intron 45.0%
GAAATTGAGTGTGGGGTGAT+TGG + chr2_1:54919085-54919104 Msa0212770:intron 45.0%
CAGGAAAGGCAAAAGGGAAA+AGG - chr2_1:54919367-54919386 None:intergenic 45.0%
! CTTTTCCCTTTTGCCTTTCC+TGG + chr2_1:54919365-54919384 Msa0212770:intron 45.0%
TAGTTGAACAAGGCTGTCAG+TGG + chr2_1:54919800-54919819 Msa0212770:intron 45.0%
CCAATAACACCTGGGTTTCT+TGG - chr2_1:54919827-54919846 None:intergenic 45.0%
! CCAAGAAACCCAGGTGTTAT+TGG + chr2_1:54919824-54919843 Msa0212770:CDS 45.0%
CACGTTCACCAATAACACCT+GGG - chr2_1:54919835-54919854 None:intergenic 45.0%
! GCATTGATATGGGATCCAAG+TGG + chr2_1:54920181-54920200 Msa0212770:intron 45.0%
TAAACATGTGGGCATCCACT+TGG - chr2_1:54920199-54920218 None:intergenic 45.0%
CTGTTAACTTCTGCTGCTAG+AGG - chr2_1:54920242-54920261 None:intergenic 45.0%
CTAGCAGCAGAAGTTAACAG+AGG + chr2_1:54920242-54920261 Msa0212770:intron 45.0%
ATCGATGCTCGCAATTTCGA+GGG + chr2_1:54920322-54920341 Msa0212770:intron 45.0%
!!! TGAGGAGAGGCACTAGTTTT+AGG + chr2_1:54920594-54920613 Msa0212770:intron 45.0%
!!! GAGGAGAGGCACTAGTTTTA+GGG + chr2_1:54920595-54920614 Msa0212770:intron 45.0%
AATGTCTACAGTGAAAGGGG+GGG - chr2_1:54920786-54920805 None:intergenic 45.0%
GAATGTCTACAGTGAAAGGG+GGG - chr2_1:54920787-54920806 None:intergenic 45.0%
GCCAGATCAGATGTAGAATC+TGG - chr2_1:54920862-54920881 None:intergenic 45.0%
AAATGGGCAAGAGAAGACTG+GGG - chr2_1:54920970-54920989 None:intergenic 45.0%
GTAAATGGGCAAGAGAAGAC+TGG - chr2_1:54920972-54920991 None:intergenic 45.0%
CTTCATATCCTGAGCAGCTA+AGG + chr2_1:54921019-54921038 Msa0212770:CDS 45.0%
TGATCAAGCCAGTTGTGAAC+TGG - chr2_1:54921084-54921103 None:intergenic 45.0%
CAGCTCATGATGACAAACGA+TGG + chr2_1:54921124-54921143 Msa0212770:CDS 45.0%
! AAGTGTGGAATGGAGGTATG+CGG - chr2_1:54921159-54921178 None:intergenic 45.0%
TTCGTGTAAGTGTGGAATGG+AGG - chr2_1:54921166-54921185 None:intergenic 45.0%
!! GGTGTTGATTCGTGTAAGTG+TGG - chr2_1:54921174-54921193 None:intergenic 45.0%
! GTAAGCTCCTGTTGTTTGTC+GGG - chr2_1:54921219-54921238 None:intergenic 45.0%
TTTCACTTCTTATCCTCCGC+CGG + chr2_1:54921278-54921297 Msa0212770:CDS 45.0%
GGTTCTCCAAGTCATAGTAC+AGG + chr2_1:54921318-54921337 Msa0212770:CDS 45.0%
AAGTGGCCTGTACTATGACT+TGG - chr2_1:54921327-54921346 None:intergenic 45.0%
AGCGCAGAATTGGAGAAATG+TGG - chr2_1:54921408-54921427 None:intergenic 45.0%
ACTCAACTGTAGCGCAGAAT+TGG - chr2_1:54921418-54921437 None:intergenic 45.0%
AATTCTGCGCTACAGTTGAG+TGG + chr2_1:54921417-54921436 Msa0212770:CDS 45.0%
! TATTCGTTGACTAAGAGGGG+AGG - chr2_1:54921496-54921515 None:intergenic 45.0%
AACCAATTGGTCAACCAAGC+AGG + chr2_1:54921519-54921538 Msa0212770:CDS 45.0%
ACCAATTGGTCAACCAAGCA+GGG + chr2_1:54921520-54921539 Msa0212770:CDS 45.0%
AACCAAGCAGGGTTATATCC+AGG + chr2_1:54921531-54921550 Msa0212770:CDS 45.0%
CAGGGTTATATCCAGGAGAT+CGG + chr2_1:54921538-54921557 Msa0212770:CDS 45.0%
GCTGCAGCATATTACTAAGG+AGG - chr2_1:54921569-54921588 None:intergenic 45.0%
! TTGCTATTGACGGATGAGCT+AGG - chr2_1:54921738-54921757 None:intergenic 45.0%
!! GCTTTCACTCTTTTGGCTAC+TGG - chr2_1:54921832-54921851 None:intergenic 45.0%
! TTTTTGCAAGACGACCTTGG+TGG - chr2_1:54921965-54921984 None:intergenic 45.0%
TTACTGGAACGTGTTCGTGA+AGG - chr2_1:54922044-54922063 None:intergenic 45.0%
CGAAAATGAAACCCTCCCTA+GGG - chr2_1:54922096-54922115 None:intergenic 45.0%
ACGAAAATGAAACCCTCCCT+AGG - chr2_1:54922097-54922116 None:intergenic 45.0%
GAGAATCAGCCTCAAGAAGA+GGG - chr2_1:54922136-54922155 None:intergenic 45.0%
TCTCCAAATTCTTCCATCCC+TGG + chr2_1:54922152-54922171 Msa0212770:CDS 45.0%
CTACCAGGGATGGAAGAATT+TGG - chr2_1:54922158-54922177 None:intergenic 45.0%
!! TTCAGAGAAGCCTCTAGAAC+AGG + chr2_1:54922193-54922212 Msa0212770:CDS 45.0%
AATGTAGGCTCCTGTTCTAG+AGG - chr2_1:54922206-54922225 None:intergenic 45.0%
CTTGTGGCTGATTAGACTGT+AGG - chr2_1:54922295-54922314 None:intergenic 45.0%
CAGTCTAATCAGCCACAAGA+TGG + chr2_1:54922296-54922315 Msa0212770:CDS 45.0%
TCTAATCAGCCACAAGATGG+TGG + chr2_1:54922299-54922318 Msa0212770:CDS 45.0%
AATTGCGTTCCACCATCTTG+TGG - chr2_1:54922311-54922330 None:intergenic 45.0%
GCAATTAAGACGAAGAAGGC+AGG + chr2_1:54922325-54922344 Msa0212770:CDS 45.0%
GAAAGAATGGGCACAAGGTT+GGG + chr2_1:54922396-54922415 Msa0212770:CDS 45.0%
! TTCCTGGTAGTGACCTTATG+CGG + chr2_1:54922507-54922526 Msa0212770:CDS 45.0%
! TAGTTTGCATGACCGTCCTT+CGG + chr2_1:54922531-54922550 Msa0212770:CDS 45.0%
GATACATTGGCAGACAACCT+CGG - chr2_1:54922624-54922643 None:intergenic 45.0%
AGGTTGTCTGCCAATGTATC+CGG + chr2_1:54922624-54922643 Msa0212770:CDS 45.0%
TTGTGGATCGGTTAGAAGCT+CGG - chr2_1:54922786-54922805 None:intergenic 45.0%
TTATAGTTGCAGGCTGCTTG+TGG - chr2_1:54922803-54922822 None:intergenic 45.0%
ATCAAATGAGGCCTGCCAAA+AGG - chr2_1:54922840-54922859 None:intergenic 45.0%
GCACCAAATGTGGATGACAT+TGG + chr2_1:54922935-54922954 Msa0212770:CDS 45.0%
CCGCCAAAGGAAGTTATTAC+TGG + chr2_1:54923033-54923052 Msa0212770:CDS 45.0%
AACAATAATGCTGGAGGCAG+TGG + chr2_1:54923091-54923110 Msa0212770:CDS 45.0%
TGGGGTTGGATTTGGATCAG+AGG - chr2_1:54915018-54915037 None:intergenic 50.0%
!!! ATGGATGGTTTTGGAGGTGG+GGG + chr2_1:54915232-54915251 Msa0212770:CDS 50.0%
ATCTGTGTGTTGGAGGGGTA+GGG + chr2_1:54915906-54915925 Msa0212770:intron 50.0%
!! CACTGTCTGGATTAGCCTTG+TGG - chr2_1:54915999-54916018 None:intergenic 50.0%
GGCTAATCCAGACAGTGCTT+AGG + chr2_1:54916002-54916021 Msa0212770:intron 50.0%
CACTCTCACTTTGCAGGATG+AGG + chr2_1:54916667-54916686 Msa0212770:intron 50.0%
ACACGGGCCTTTGAATACCT+TGG + chr2_1:54917333-54917352 Msa0212770:intron 50.0%
CACGGGCCTTTGAATACCTT+GGG + chr2_1:54917334-54917353 Msa0212770:intron 50.0%
! GACACAAGGCTTGGTTGTTG+TGG - chr2_1:54917708-54917727 None:intergenic 50.0%
ACACTTAGCGACACAAGGCT+TGG - chr2_1:54917717-54917736 None:intergenic 50.0%
! AAGCCTTGTGTCGCTAAGTG+TGG + chr2_1:54917716-54917735 Msa0212770:intron 50.0%
! CTTGTGTCGCTAAGTGTGGT+CGG + chr2_1:54917720-54917739 Msa0212770:intron 50.0%
ATCTGCCAACAAGGCAAGAG+AGG - chr2_1:54917973-54917992 None:intergenic 50.0%
! AATATTGGTTGGGTCAGGCC+AGG - chr2_1:54918421-54918440 None:intergenic 50.0%
!! GCTTAAGCTTTAGGGGCAGT+TGG - chr2_1:54918473-54918492 None:intergenic 50.0%
!! AAGATGTCGGCTTTGAAGGG+TGG - chr2_1:54918591-54918610 None:intergenic 50.0%
ACCCTTCAAAGCCGACATCT+TGG + chr2_1:54918590-54918609 Msa0212770:intron 50.0%
!! GCCAAGATGTCGGCTTTGAA+GGG - chr2_1:54918594-54918613 None:intergenic 50.0%
!! TGCCAAGATGTCGGCTTTGA+AGG - chr2_1:54918595-54918614 None:intergenic 50.0%
CCAGCCTCTCCAAGTACTTT+GGG + chr2_1:54918651-54918670 Msa0212770:intron 50.0%
! GGTACCCAAAGTACTTGGAG+AGG - chr2_1:54918658-54918677 None:intergenic 50.0%
! GAGGCTCAACGGAGTACTTA+AGG - chr2_1:54918680-54918699 None:intergenic 50.0%
CACATCAGGTTCCTCCAATG+GGG - chr2_1:54918808-54918827 None:intergenic 50.0%
CCACATCAGGTTCCTCCAAT+GGG - chr2_1:54918809-54918828 None:intergenic 50.0%
CCATTGGAGGAACCTGATGT+GGG + chr2_1:54918807-54918826 Msa0212770:intron 50.0%
CATTGGAGGAACCTGATGTG+GGG + chr2_1:54918808-54918827 Msa0212770:intron 50.0%
! GCCCCCCTTCTTTTTATGGT+TGG - chr2_1:54918924-54918943 None:intergenic 50.0%
AGTGTGGGGTGATTGGTATG+TGG + chr2_1:54919092-54919111 Msa0212770:intron 50.0%
CCACGTTCACCAATAACACC+TGG - chr2_1:54919836-54919855 None:intergenic 50.0%
!! CCAGGTGTTATTGGTGAACG+TGG + chr2_1:54919833-54919852 Msa0212770:CDS 50.0%
TGCTGCTAGAGGCTATAACG+TGG - chr2_1:54920231-54920250 None:intergenic 50.0%
GATCGATGCTCGCAATTTCG+AGG + chr2_1:54920321-54920340 Msa0212770:intron 50.0%
CACTAGAGCAATGTTGGAGG+TGG - chr2_1:54921059-54921078 None:intergenic 50.0%
GCTCACTAGAGCAATGTTGG+AGG - chr2_1:54921062-54921081 None:intergenic 50.0%
CTGGCTCACTAGAGCAATGT+TGG - chr2_1:54921065-54921084 None:intergenic 50.0%
CTAGTGAGCCAGTTCACAAC+TGG + chr2_1:54921073-54921092 Msa0212770:CDS 50.0%
TTCACTTCTTATCCTCCGCC+GGG + chr2_1:54921279-54921298 Msa0212770:CDS 50.0%
AACCTTGGGTCACACTTTGG+TGG + chr2_1:54921444-54921463 Msa0212770:CDS 50.0%
TTCCACCAAAGTGTGACCCA+AGG - chr2_1:54921449-54921468 None:intergenic 50.0%
ACCCTGCTTGGTTGACCAAT+TGG - chr2_1:54921524-54921543 None:intergenic 50.0%
CTCCTGGATATAACCCTGCT+TGG - chr2_1:54921536-54921555 None:intergenic 50.0%
CATCCTGTTCAGCAATCTGC+AGG + chr2_1:54921666-54921685 Msa0212770:CDS 50.0%
TAGCCTGCAGATTGCTGAAC+AGG - chr2_1:54921672-54921691 None:intergenic 50.0%
CAATCTGCAGGCTACTTGTC+AGG + chr2_1:54921678-54921697 Msa0212770:CDS 50.0%
GATGAGCTAGGAGAAAGGTG+GGG - chr2_1:54921726-54921745 None:intergenic 50.0%
GGATGAGCTAGGAGAAAGGT+GGG - chr2_1:54921727-54921746 None:intergenic 50.0%
! TGACGGATGAGCTAGGAGAA+AGG - chr2_1:54921731-54921750 None:intergenic 50.0%
!! TTCAGGTTGATTCCCTAGGG+AGG + chr2_1:54922081-54922100 Msa0212770:CDS 50.0%
!! TCAGGTTGATTCCCTAGGGA+GGG + chr2_1:54922082-54922101 Msa0212770:CDS 50.0%
GGAGAATCAGCCTCAAGAAG+AGG - chr2_1:54922137-54922156 None:intergenic 50.0%
TAGATCAGAGCTACCAGGGA+TGG - chr2_1:54922168-54922187 None:intergenic 50.0%
GTGACTCTGGCAGCAAATGT+AGG - chr2_1:54922221-54922240 None:intergenic 50.0%
TGCTGCCAGAGTCACAATTG+AGG + chr2_1:54922226-54922245 Msa0212770:CDS 50.0%
GCCAGAGTCACAATTGAGGA+CGG + chr2_1:54922230-54922249 Msa0212770:CDS 50.0%
ACCGTCCTCAATTGTGACTC+TGG - chr2_1:54922234-54922253 None:intergenic 50.0%
ACGAAGAAGGCAGGTCCTAT+TGG + chr2_1:54922334-54922353 Msa0212770:CDS 50.0%
AGAAGGCAGGTCCTATTGGA+AGG + chr2_1:54922338-54922357 Msa0212770:CDS 50.0%
TTGACCCGCTGGGAAAGAAT+GGG + chr2_1:54922384-54922403 Msa0212770:CDS 50.0%
TTGTGCCCATTCTTTCCCAG+CGG - chr2_1:54922392-54922411 None:intergenic 50.0%
GGAAAGAATGGGCACAAGGT+TGG + chr2_1:54922395-54922414 Msa0212770:CDS 50.0%
ATCCGCATAAGGTCACTACC+AGG - chr2_1:54922512-54922531 None:intergenic 50.0%
GGTTGTCTGCCAATGTATCC+GGG + chr2_1:54922625-54922644 Msa0212770:CDS 50.0%
GTTGTCTGCCAATGTATCCG+GGG + chr2_1:54922626-54922645 Msa0212770:CDS 50.0%
GATCCATTCCCCGGATACAT+TGG - chr2_1:54922637-54922656 None:intergenic 50.0%
TGTATCCGGGGAATGGATCT+TGG + chr2_1:54922638-54922657 Msa0212770:CDS 50.0%
! GGGTAATCGTTCCTTTTGGC+AGG + chr2_1:54922826-54922845 Msa0212770:CDS 50.0%
AATAATGCTGGAGGCAGTGG+AGG + chr2_1:54923094-54923113 Msa0212770:CDS 50.0%
TTTGGAGGTGGGGGTGATCT+TGG + chr2_1:54915241-54915260 Msa0212770:CDS 55.0%
! CTTGGTGGACCTCCTAGTTC+TGG + chr2_1:54915259-54915278 Msa0212770:CDS 55.0%
CATCTGTGTGTTGGAGGGGT+AGG + chr2_1:54915905-54915924 Msa0212770:intron 55.0%
TCTGTGTGTTGGAGGGGTAG+GGG + chr2_1:54915907-54915926 Msa0212770:intron 55.0%
GAGGGTTGAAGAACATCGCG+TGG + chr2_1:54915929-54915948 Msa0212770:intron 55.0%
TGCTGTCCAGGAAGTCGAGT+TGG + chr2_1:54916435-54916454 Msa0212770:CDS 55.0%
GCTGTCCAGGAAGTCGAGTT+GGG + chr2_1:54916436-54916455 Msa0212770:CDS 55.0%
!! TCCAGGAAGTCGAGTTGGGA+GGG + chr2_1:54916440-54916459 Msa0212770:CDS 55.0%
! CGAGTTGGGAGGGTTAGAAG+AGG + chr2_1:54916450-54916469 Msa0212770:CDS 55.0%
!! GCAGCCCGGAGTTTGTTACA+GGG + chr2_1:54917204-54917223 Msa0212770:intron 55.0%
CGACCACACTTAGCGACACA+AGG - chr2_1:54917722-54917741 None:intergenic 55.0%
TGGGATAACATGCAGAGCGG+TGG - chr2_1:54918213-54918232 None:intergenic 55.0%
! TTTGGGTGGTGGTTTGGCCT+CGG + chr2_1:54918278-54918297 Msa0212770:intron 55.0%
GAGTGCAGCTGCCAAGATGT+CGG - chr2_1:54918604-54918623 None:intergenic 55.0%
GCCAGCCTCTCCAAGTACTT+TGG + chr2_1:54918650-54918669 Msa0212770:intron 55.0%
! CCCAAAGTACTTGGAGAGGC+TGG - chr2_1:54918654-54918673 None:intergenic 55.0%
CACCACGTTGAGAGGCTCAA+CGG - chr2_1:54918691-54918710 None:intergenic 55.0%
CCCATTGGAGGAACCTGATG+TGG + chr2_1:54918806-54918825 Msa0212770:intron 55.0%
CCCACATCAGGTTCCTCCAA+TGG - chr2_1:54918810-54918829 None:intergenic 55.0%
GTGGGGTGATTGGTATGTGG+AGG + chr2_1:54919095-54919114 Msa0212770:intron 55.0%
GTCAGTGGACCAAGAAACCC+AGG + chr2_1:54919815-54919834 Msa0212770:CDS 55.0%
ACAGTGAAAGGGGGGGAGAA+GGG - chr2_1:54920779-54920798 None:intergenic 55.0%
TACAGTGAAAGGGGGGGAGA+AGG - chr2_1:54920780-54920799 None:intergenic 55.0%
TGCTCTTGCCTTAGCTGCTC+AGG - chr2_1:54921030-54921049 None:intergenic 55.0%
GCTGCTGCTCCAGTGTGATA+TGG - chr2_1:54921357-54921376 None:intergenic 55.0%
CTAAGAGGGGAGGAACCAGT+AGG - chr2_1:54921486-54921505 None:intergenic 55.0%
CGGATGAGCTAGGAGAAAGG+TGG - chr2_1:54921728-54921747 None:intergenic 55.0%
ACTTCAACTGGTTGACCCGC+TGG + chr2_1:54922373-54922392 Msa0212770:CDS 55.0%
CTTCAACTGGTTGACCCGCT+GGG + chr2_1:54922374-54922393 Msa0212770:CDS 55.0%
GTTGACCCGCTGGGAAAGAA+TGG + chr2_1:54922383-54922402 Msa0212770:CDS 55.0%
TGTGCCCATTCTTTCCCAGC+GGG - chr2_1:54922391-54922410 None:intergenic 55.0%
GCTGGGAAAGAATGGGCACA+AGG + chr2_1:54922391-54922410 Msa0212770:CDS 55.0%
CAAGGTTGGGCTTGCAGCTA+AGG + chr2_1:54922409-54922428 Msa0212770:CDS 55.0%
CAAGGAGCTTGCGTCCCTTA+GGG - chr2_1:54922466-54922485 None:intergenic 55.0%
!! CTTATTTGGTGGGCTCCCCT+CGG + chr2_1:54922565-54922584 Msa0212770:CDS 55.0%
CATGTAGTCACTGCAGCTGC+TGG - chr2_1:54922593-54922612 None:intergenic 55.0%
GACTACATGCAACCTTGCCG+AGG + chr2_1:54922604-54922623 Msa0212770:CDS 55.0%
ATTGGCAGACAACCTCGGCA+AGG - chr2_1:54922619-54922638 None:intergenic 55.0%
CTGCCAATGTATCCGGGGAA+TGG + chr2_1:54922631-54922650 Msa0212770:CDS 55.0%
GAGCACCAAGATCCATTCCC+CGG - chr2_1:54922646-54922665 None:intergenic 55.0%
CTCCAGCAGTGCTTCCAACA+GGG - chr2_1:54922721-54922740 None:intergenic 55.0%
TCTCCAGCAGTGCTTCCAAC+AGG - chr2_1:54922722-54922741 None:intergenic 55.0%
!! GTTGGAAGCACTGCTGGAGA+TGG + chr2_1:54922722-54922741 Msa0212770:CDS 55.0%
GTTGCAGGCTGCTTGTGGAT+CGG - chr2_1:54922798-54922817 None:intergenic 55.0%
GGAGGGACTGCATGATACTG+TGG - chr2_1:54922904-54922923 None:intergenic 55.0%
CTTGCGCGCAAGAGTTCAAC+AGG - chr2_1:54922995-54923014 None:intergenic 55.0%
TTTGGCGGTCATCAGTGTGG+GGG - chr2_1:54923021-54923040 None:intergenic 55.0%
CTTTGGCGGTCATCAGTGTG+GGG - chr2_1:54923022-54923041 None:intergenic 55.0%
CCTTTGGCGGTCATCAGTGT+GGG - chr2_1:54923023-54923042 None:intergenic 55.0%
TCCTTTGGCGGTCATCAGTG+TGG - chr2_1:54923024-54923043 None:intergenic 55.0%
CAGCGTTCTGTTCCCGTGAT+TGG + chr2_1:54923064-54923083 Msa0212770:CDS 55.0%
TGTGTTGGAGGGGTAGGGGA+GGG + chr2_1:54915911-54915930 Msa0212770:intron 60.0%
!! GTCCAGGAAGTCGAGTTGGG+AGG + chr2_1:54916439-54916458 Msa0212770:CDS 60.0%
ACCCTCCCAACTCGACTTCC+TGG - chr2_1:54916444-54916463 None:intergenic 60.0%
! TTTTTGCAGCTGCGGCAGCC+CGG + chr2_1:54917190-54917209 Msa0212770:intron 60.0%
!! GGCAGCCCGGAGTTTGTTAC+AGG + chr2_1:54917203-54917222 Msa0212770:intron 60.0%
! GAGCGGTCGACTCCGAAACT+GGG - chr2_1:54918232-54918251 None:intergenic 60.0%
! AGAGCGGTCGACTCCGAAAC+TGG - chr2_1:54918233-54918252 None:intergenic 60.0%
TCGACCGCTCTGCGTGATCT+GGG + chr2_1:54918242-54918261 Msa0212770:intron 60.0%
CGATCCCAGATCACGCAGAG+CGG - chr2_1:54918249-54918268 None:intergenic 60.0%
! TTGGGTGGTGGTTTGGCCTC+GGG + chr2_1:54918279-54918298 Msa0212770:intron 60.0%
CTCCGTTGAGCCTCTCAACG+TGG + chr2_1:54918686-54918705 Msa0212770:intron 60.0%
CAGTGAAAGGGGGGGAGAAG+GGG - chr2_1:54920778-54920797 None:intergenic 60.0%
ACTTCTTATCCTCCGCCGGG+TGG + chr2_1:54921282-54921301 Msa0212770:CDS 60.0%
TGTTGAGATCGACCACCCGG+CGG - chr2_1:54921297-54921316 None:intergenic 60.0%
CCCTGTTGAGATCGACCACC+CGG - chr2_1:54921300-54921319 None:intergenic 60.0%
CCGGGTGGTCGATCTCAACA+GGG + chr2_1:54921297-54921316 Msa0212770:CDS 60.0%
CACTGGAGCAGCAGCTCAGT+TGG + chr2_1:54921362-54921381 Msa0212770:CDS 60.0%
AGGAGGTTGGACCGATCTCC+TGG - chr2_1:54921552-54921571 None:intergenic 60.0%
TCAGCCTCAAGAAGAGGGCG+AGG - chr2_1:54922131-54922150 None:intergenic 60.0%
GCAAGGAGCTTGCGTCCCTT+AGG - chr2_1:54922467-54922486 None:intergenic 60.0%
ACTGCAGCTGCTGGATCCGA+GGG - chr2_1:54922584-54922603 None:intergenic 60.0%
CCCACACTGATGACCGCCAA+AGG + chr2_1:54923020-54923039 Msa0212770:CDS 60.0%
GGAGGTGGGGGTGATCTTGG+TGG + chr2_1:54915244-54915263 Msa0212770:CDS 65.0%
GTGTGTTGGAGGGGTAGGGG+AGG + chr2_1:54915910-54915929 Msa0212770:intron 65.0%
GTCGACCGCTCTGCGTGATC+TGG + chr2_1:54918241-54918260 Msa0212770:intron 65.0%
! TGGGTGGTGGTTTGGCCTCG+GGG + chr2_1:54918280-54918299 Msa0212770:intron 65.0%
GCCGGGTGGTCGATCTCAAC+AGG + chr2_1:54921296-54921315 Msa0212770:CDS 65.0%
TCGGCCTCGCCCTCTTCTTG+AGG + chr2_1:54922124-54922143 Msa0212770:CDS 65.0%
CTGCAGCTGCTGGATCCGAG+GGG - chr2_1:54922583-54922602 None:intergenic 65.0%
CACTGCAGCTGCTGGATCCG+AGG - chr2_1:54922585-54922604 None:intergenic 65.0%
CATCCTCCTCTGCGCCCTGT+TGG + chr2_1:54922704-54922723 Msa0212770:CDS 65.0%
CTTCCAACAGGGCGCAGAGG+AGG - chr2_1:54922710-54922729 None:intergenic 65.0%
GTGCTTCCAACAGGGCGCAG+AGG - chr2_1:54922713-54922732 None:intergenic 65.0%
!! CGCCCTGTTGGAAGCACTGC+TGG + chr2_1:54922716-54922735 Msa0212770:CDS 65.0%
TGAGATCGACCACCCGGCGG+AGG - chr2_1:54921294-54921313 None:intergenic 70.0%
GGCGGTCATCAGTGTGGGGG+AGG - chr2_1:54923018-54923037 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 54914950 54923147 54914950 ID=Msa0212770;Name=Msa0212770
chr2_1 mRNA 54914950 54923147 54914950 ID=Msa0212770-mRNA-1;Parent=Msa0212770;Name=Msa0212770-mRNA-1;_AED=0.01;_eAED=0.01;_QI=273|1|0.8|1|1|1|5|0|880
chr2_1 exon 54914950 54915316 54914950 ID=Msa0212770-mRNA-1:exon:15253;Parent=Msa0212770-mRNA-1
chr2_1 exon 54916389 54916531 54916389 ID=Msa0212770-mRNA-1:exon:15254;Parent=Msa0212770-mRNA-1
chr2_1 exon 54916683 54916739 54916683 ID=Msa0212770-mRNA-1:exon:15255;Parent=Msa0212770-mRNA-1
chr2_1 exon 54919803 54919866 54919803 ID=Msa0212770-mRNA-1:exon:15256;Parent=Msa0212770-mRNA-1
chr2_1 exon 54920863 54923147 54920863 ID=Msa0212770-mRNA-1:exon:15257;Parent=Msa0212770-mRNA-1
chr2_1 five_prime_UTR 54914950 54915222 54914950 ID=Msa0212770-mRNA-1:five_prime_utr;Parent=Msa0212770-mRNA-1
chr2_1 CDS 54915223 54915316 54915223 ID=Msa0212770-mRNA-1:cds;Parent=Msa0212770-mRNA-1
chr2_1 CDS 54916389 54916531 54916389 ID=Msa0212770-mRNA-1:cds;Parent=Msa0212770-mRNA-1
chr2_1 CDS 54916683 54916739 54916683 ID=Msa0212770-mRNA-1:cds;Parent=Msa0212770-mRNA-1
chr2_1 CDS 54919803 54919866 54919803 ID=Msa0212770-mRNA-1:cds;Parent=Msa0212770-mRNA-1
chr2_1 CDS 54920863 54923147 54920863 ID=Msa0212770-mRNA-1:cds;Parent=Msa0212770-mRNA-1
Gene Sequence

>Msa0212770

ATGGTGGATATGGATGGTTTTGGAGGTGGGGGTGATCTTGGTGGACCTCCTAGTTCTGGAGATCTTAGGCAATTGGGTCATGTTCCTGTTTCAGGAGGTGCTGTTTTTGATGCATCACAATATGCATTCTTTGGTAAAGATGCTGTCCAGGAAGTCGAGTTGGGAGGGTTAGAAGAGGACGCCCATTTGCCAACTTTTGAGTCTAATGAGGAGGAGTTCTTTTTTAATAGAGAACAGGATGAGGATGTGAGATCTCTTTCTGATATTGACGATCTTACAACCACCTTTTGGAAGTTGAACAAGGCTGTCAGTGGACCAAGAAACCCAGGTGTTATTGGTGAACGTGGATCCAGAGAAAATTCTACATCTGATCTGGCACAAAGAGACGATGTTCATAACTGGTTTGATCAGAATGCGTATGATAGTGAAGGTTCAATTGATGGAAAAAGATGGTCATCACAGCCCCAGTCTTCTCTTGCCCATTTACAAAATTCAAAGTCCTTGTACAGAACATCTTCATATCCTGAGCAGCTAAGGCAAGAGCAAAACTACCACCTCCAACATTGCTCTAGTGAGCCAGTTCACAACTGGCTTGATCAACATATTTATGATATTGAAACAGCTCATGATGACAAACGATGGTCATCTCAGCCGCATACCTCCATTCCACACTTACACGAATCAACACCCTTGTACAGAACATCTTCATATCCCGACAAACAACAGGAGCTTACTCGTTTTTCTAGTGAGCCAATATTGGTACAGAAGTCTTCTTTCACTTCTTATCCTCCGCCGGGTGGTCGATCTCAACAGGGTTCTCCAAGTCATAGTACAGGCCACTTGAACATTCCATATCACACTGGAGCAGCAGCTCAGTTGGCACTATCATCTCAAAATCGACCACATTTCTCCAATTCTGCGCTACAGTTGAGTGGATTAAACCTTGGGTCACACTTTGGTGGAAACACACGACAATATCCTACTGGTTCCTCCCCTCTTAGTCAACGAATACAGAACCAATTGGTCAACCAAGCAGGGTTATATCCAGGAGATCGGTCCAACCTCCTTAGTAATATGCTGCAGCAACAACTACAGCTTCATAATGGATCAGTTTCTCCTCACTTGATGACTCAATTGCAACAGCAGCAGCATAGAATGCATCATCCTGTTCAGCAATCTGCAGGCTACTTGTCAGGTTTCCAGTCCCATTTATTTAATCCCCACCTTTCTCCTAGCTCATCCGTCAATAGCAAGTATGATCACAGACATAAATCAACTCAAAAAGGTAAACATAGTCATCGTTTATCACATCAGGGTTCTGATGCCAGTAGCCAAAAGAGTGAAAGCAGTTCATTACAGTTTCGGTCCAAGCATATGACAAGTGATGAAATTGAGAGTATTCTTAGAATGCAGCTTGCTGTCACTCACAGTAATGATCCATACATAGATGACTATTACCACCAAGGTCGTCTTGCAAAAAAACCTTCTGTGGCTAAGTTAAAACATCCTTTCTGCCCAACCCAAATAAAGGAACTTCCTTCACGAACACGTTCCAGTAATGATCCTCATGCATTTCTTCAGGTTGATTCCCTAGGGAGGGTTTCATTTTCGTCTATTCGTCGGCCTCGCCCTCTTCTTGAGGCTGATTCTCCAAATTCTTCCATCCCTGGTAGCTCTGATCTAAAGATTTCAGAGAAGCCTCTAGAACAGGAGCCTACATTTGCTGCCAGAGTCACAATTGAGGACGGTCTTTGTCTTCTTCTTGATGTAGATGATATTGATCGTTTCCTACAGTCTAATCAGCCACAAGATGGTGGAACGCAATTAAGACGAAGAAGGCAGGTCCTATTGGAAGGACTAGCTACTTCACTTCAACTGGTTGACCCGCTGGGAAAGAATGGGCACAAGGTTGGGCTTGCAGCTAAGGATGACCTTGTTTTCATAAGGATAGTATCTGTCCCTAAGGGACGCAAGCTCCTTGCGAAGTATCTTCAATTGCTTCTTCCTGGTAGTGACCTTATGCGGATAGTTTGCATGACCGTCCTTCGGCATTTAAGATTCTTATTTGGTGGGCTCCCCTCGGATCCAGCAGCTGCAGTGACTACATGCAACCTTGCCGAGGTTGTCTGCCAATGTATCCGGGGAATGGATCTTGGTGCTCTTAGTGCTTGTCTTGCTGCAGTTGTTTGTTCTGCAGAGCATCCTCCTCTGCGCCCTGTTGGAAGCACTGCTGGAGATGGTGCTTCCCTTATTTTGGTATCTGTTCTTGAGAGGGCTACCGAGCTTCTAACCGATCCACAAGCAGCCTGCAACTATAATATGGGTAATCGTTCCTTTTGGCAGGCCTCATTTGATGAATTCTTTGGCCTTATTACTAAGTATTGCATGAATAAATACCACAGTATCATGCAGTCCCTCCTTATACAAAATGCACCAAATGTGGATGACATTGGATCAGATGCTGCTAATGCAATTAGTAAGGAAATGCCTGTTGAACTCTTGCGCGCAAGCCTCCCCCACACTGATGACCGCCAAAGGAAGTTATTACTGGATTTTGCTCAGCGTTCTGTTCCCGTGATTGGATTTAACAATAATGCTGGAGGCAGTGGAGGTCTTGTGAATTCAGAGACAGTGCTAAGTTGA
Protein sequence

>Msa0212770

MVDMDGFGGGGDLGGPPSSGDLRQLGHVPVSGGAVFDASQYAFFGKDAVQEVELGGLEEDAHLPTFESNEEEFFFNREQDEDVRSLSDIDDLTTTFWKLNKAVSGPRNPGVIGERGSRENSTSDLAQRDDVHNWFDQNAYDSEGSIDGKRWSSQPQSSLAHLQNSKSLYRTSSYPEQLRQEQNYHLQHCSSEPVHNWLDQHIYDIETAHDDKRWSSQPHTSIPHLHESTPLYRTSSYPDKQQELTRFSSEPILVQKSSFTSYPPPGGRSQQGSPSHSTGHLNIPYHTGAAAQLALSSQNRPHFSNSALQLSGLNLGSHFGGNTRQYPTGSSPLSQRIQNQLVNQAGLYPGDRSNLLSNMLQQQLQLHNGSVSPHLMTQLQQQQHRMHHPVQQSAGYLSGFQSHLFNPHLSPSSSVNSKYDHRHKSTQKGKHSHRLSHQGSDASSQKSESSSLQFRSKHMTSDEIESILRMQLAVTHSNDPYIDDYYHQGRLAKKPSVAKLKHPFCPTQIKELPSRTRSSNDPHAFLQVDSLGRVSFSSIRRPRPLLEADSPNSSIPGSSDLKISEKPLEQEPTFAARVTIEDGLCLLLDVDDIDRFLQSNQPQDGGTQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFIRIVSVPKGRKLLAKYLQLLLPGSDLMRIVCMTVLRHLRFLFGGLPSDPAAAVTTCNLAEVVCQCIRGMDLGALSACLAAVVCSAEHPPLRPVGSTAGDGASLILVSVLERATELLTDPQAACNYNMGNRSFWQASFDEFFGLITKYCMNKYHSIMQSLLIQNAPNVDDIGSDAANAISKEMPVELLRASLPHTDDRQRKLLLDFAQRSVPVIGFNNNAGGSGGLVNSETVLS*