Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213900 | XP_013464515.1 | 99.615 | 520 | 2 | 0 | 12 | 531 | 444 | 963 | 0.0 | 1079 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213900 | sp|Q9SYM4|TPS1_ARATH | 71.295 | 533 | 134 | 5 | 12 | 529 | 413 | 941 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213900 | A0A072VK67 | 99.615 | 520 | 2 | 0 | 12 | 531 | 444 | 963 | 0.0 | 1079 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0213900 | Msa0293500 | 0.801108 | 1.051686e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213900 | MtrunA17_Chr2g0314621 | 99.423 | 520 | 2 | 1 | 12 | 531 | 444 | 962 | 0.0 | 1072 |
| Msa0213900 | MtrunA17_Chr8g0359371 | 76.641 | 518 | 113 | 5 | 12 | 524 | 405 | 919 | 0.0 | 811 |
| Msa0213900 | MtrunA17_Chr8g0380061 | 67.173 | 527 | 153 | 7 | 12 | 529 | 4 | 519 | 0.0 | 712 |
| Msa0213900 | MtrunA17_Chr1g0161531 | 33.019 | 424 | 234 | 13 | 13 | 403 | 394 | 800 | 6.32e-61 | 215 |
| Msa0213900 | MtrunA17_Chr1g0209251 | 31.829 | 421 | 241 | 10 | 13 | 402 | 387 | 792 | 2.60e-59 | 211 |
| Msa0213900 | MtrunA17_Chr4g0041381 | 30.879 | 421 | 245 | 11 | 14 | 404 | 395 | 799 | 5.53e-59 | 209 |
| Msa0213900 | MtrunA17_Chr8g0364961 | 30.733 | 423 | 245 | 11 | 13 | 403 | 381 | 787 | 1.26e-55 | 200 |
| Msa0213900 | MtrunA17_Chr8g0391971 | 32.195 | 410 | 231 | 12 | 25 | 403 | 406 | 799 | 5.82e-55 | 198 |
| Msa0213900 | MtrunA17_Chr4g0073041 | 29.882 | 425 | 247 | 12 | 13 | 403 | 385 | 792 | 1.77e-54 | 197 |
| Msa0213900 | MtrunA17_Chr3g0117891 | 29.314 | 423 | 251 | 12 | 13 | 403 | 306 | 712 | 2.34e-53 | 193 |
| Msa0213900 | MtrunA17_Chr3g0107401 | 23.596 | 267 | 165 | 6 | 13 | 263 | 326 | 569 | 1.31e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213900 | AT1G78580.4 | 71.295 | 533 | 134 | 5 | 12 | 529 | 413 | 941 | 0.0 | 761 |
| Msa0213900 | AT1G78580.1 | 71.295 | 533 | 134 | 5 | 12 | 529 | 413 | 941 | 0.0 | 761 |
| Msa0213900 | AT1G78580.2 | 71.295 | 533 | 134 | 5 | 12 | 529 | 413 | 941 | 0.0 | 761 |
| Msa0213900 | AT1G78580.3 | 71.295 | 533 | 134 | 5 | 12 | 529 | 413 | 941 | 0.0 | 761 |
| Msa0213900 | AT1G16980.1 | 64.810 | 395 | 135 | 2 | 12 | 406 | 333 | 723 | 0.0 | 548 |
| Msa0213900 | AT4G27550.2 | 64.589 | 401 | 134 | 4 | 12 | 408 | 324 | 720 | 0.0 | 540 |
| Msa0213900 | AT4G27550.1 | 63.415 | 410 | 133 | 5 | 12 | 408 | 324 | 729 | 0.0 | 534 |
| Msa0213900 | AT1G16980.2 | 60.854 | 281 | 107 | 1 | 12 | 292 | 333 | 610 | 2.62e-121 | 371 |
| Msa0213900 | AT1G06410.3 | 30.909 | 440 | 255 | 10 | 13 | 425 | 385 | 802 | 1.11e-62 | 220 |
| Msa0213900 | AT1G06410.1 | 30.909 | 440 | 255 | 10 | 13 | 425 | 385 | 802 | 1.11e-62 | 220 |
| Msa0213900 | AT1G06410.2 | 30.909 | 440 | 255 | 10 | 13 | 425 | 385 | 802 | 1.11e-62 | 220 |
| Msa0213900 | AT1G70290.2 | 31.659 | 458 | 258 | 15 | 18 | 437 | 352 | 792 | 9.75e-60 | 211 |
| Msa0213900 | AT1G70290.1 | 31.659 | 458 | 258 | 15 | 18 | 437 | 390 | 830 | 1.47e-59 | 211 |
| Msa0213900 | AT4G17770.1 | 30.569 | 422 | 247 | 9 | 13 | 403 | 387 | 793 | 3.35e-57 | 205 |
| Msa0213900 | AT4G17770.2 | 30.569 | 422 | 247 | 9 | 13 | 403 | 387 | 793 | 3.35e-57 | 205 |
| Msa0213900 | AT1G60140.6 | 31.442 | 423 | 242 | 13 | 13 | 403 | 387 | 793 | 2.30e-56 | 202 |
| Msa0213900 | AT1G60140.1 | 31.442 | 423 | 242 | 13 | 13 | 403 | 387 | 793 | 2.30e-56 | 202 |
| Msa0213900 | AT1G60140.2 | 31.442 | 423 | 242 | 13 | 13 | 403 | 387 | 793 | 2.30e-56 | 202 |
| Msa0213900 | AT1G60140.5 | 31.442 | 423 | 242 | 13 | 13 | 403 | 387 | 793 | 2.30e-56 | 202 |
| Msa0213900 | AT1G60140.4 | 31.442 | 423 | 242 | 13 | 13 | 403 | 387 | 793 | 2.30e-56 | 202 |
| Msa0213900 | AT1G23870.1 | 31.220 | 410 | 236 | 9 | 25 | 403 | 399 | 793 | 7.73e-56 | 201 |
| Msa0213900 | AT2G18700.1 | 29.206 | 428 | 247 | 14 | 13 | 403 | 378 | 786 | 2.57e-52 | 191 |
| Msa0213900 | AT1G68020.2 | 30.047 | 426 | 245 | 13 | 13 | 403 | 397 | 804 | 5.83e-51 | 187 |
| Msa0213900 | AT1G68020.3 | 30.047 | 426 | 245 | 13 | 13 | 403 | 397 | 804 | 5.83e-51 | 187 |
| Msa0213900 | AT1G60140.3 | 31.266 | 387 | 223 | 10 | 13 | 367 | 387 | 762 | 1.06e-49 | 183 |
| Msa0213900 | AT1G68020.1 | 28.522 | 291 | 163 | 7 | 13 | 269 | 397 | 676 | 4.86e-29 | 122 |
Find 107 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTAATCGATTGCTTATTT+TGG | 0.140569 | 2_1:-57631761 | Msa0213900:intron |
| TCAACTGATGCATTTGAAAT+TGG | 0.148194 | 2_1:+57630352 | None:intergenic |
| TCTTGGGGCTGGGGCACTTC+TGG | 0.167740 | 2_1:-57632468 | Msa0213900:CDS |
| TTAAGTAATTGTGAAATTAT+TGG | 0.181337 | 2_1:+57629336 | None:intergenic |
| GAGCCAGAGCCTTCTTCTTT+TGG | 0.204253 | 2_1:-57629862 | Msa0213900:CDS |
| CATTCCATGTTTAGTTGTTC+TGG | 0.247193 | 2_1:+57630706 | None:intergenic |
| CTGCGCAGTCTCTTGGGGCT+GGG | 0.247244 | 2_1:-57632478 | Msa0213900:CDS |
| GCTGCGCAGTCTCTTGGGGC+TGG | 0.263940 | 2_1:-57632479 | Msa0213900:CDS |
| GCTGGTGCTGCGCAGTCTCT+TGG | 0.273891 | 2_1:-57632485 | Msa0213900:CDS |
| AGAACGACAACTGTAGTATT+TGG | 0.282469 | 2_1:+57630913 | None:intergenic |
| GGCCGCATCAATGGCAGATT+TGG | 0.285107 | 2_1:-57634364 | Msa0213900:CDS |
| TTGGTGTTCTTGTAGTTTGC+TGG | 0.308000 | 2_1:-57632503 | Msa0213900:intron |
| TTAATTGATGGGATCTTCAT+AGG | 0.310450 | 2_1:+57629778 | None:intergenic |
| GTCAACGGTTGTTTCAATTC+TGG | 0.317553 | 2_1:+57630952 | None:intergenic |
| TGTGCTTTGTACGCTGTTAC+AGG | 0.322465 | 2_1:-57633747 | Msa0213900:intron |
| ATTGATTATGTTCTATGTAT+AGG | 0.327982 | 2_1:-57630114 | Msa0213900:CDS |
| CTGGTGCTGCGCAGTCTCTT+GGG | 0.339391 | 2_1:-57632484 | Msa0213900:CDS |
| ACTACAGTTGTCGTTCTTAG+TGG | 0.343066 | 2_1:-57630907 | Msa0213900:CDS |
| ACAATCATAGATGTTGAGTT+TGG | 0.344179 | 2_1:-57630418 | Msa0213900:intron |
| TGATGGCATGTTCAGAGCTT+TGG | 0.345059 | 2_1:+57632406 | None:intergenic |
| ATATTGTTGAATTGTCTTCC+TGG | 0.352151 | 2_1:+57631792 | None:intergenic |
| CTTAGCAATGTTGCTTCCTC+AGG | 0.365419 | 2_1:-57629434 | Msa0213900:three_prime_UTR |
| CAGAGCTTTGGCAATTGCTT+CGG | 0.380321 | 2_1:+57632418 | None:intergenic |
| AGCAGCCATTGACCGCATCC+TGG | 0.387739 | 2_1:-57630172 | Msa0213900:CDS |
| CATAGGTGATACCTTCTCAT+TGG | 0.388274 | 2_1:+57629795 | None:intergenic |
| GGCCAACAATTTCATGAACT+TGG | 0.402946 | 2_1:+57634383 | None:intergenic |
| TGCGCAGTCTCTTGGGGCTG+GGG | 0.406149 | 2_1:-57632477 | Msa0213900:CDS |
| TTTCTTGTAATATAGTCATT+TGG | 0.407325 | 2_1:-57629372 | Msa0213900:three_prime_UTR |
| TTGCACTTGTCACGTCTTTG+AGG | 0.411982 | 2_1:-57632729 | Msa0213900:CDS |
| AAAGGGAAGCTTCCCTTGTA+TGG | 0.415736 | 2_1:-57630529 | Msa0213900:CDS |
| CTTTGCCAGAAAAGATCTCT+TGG | 0.423899 | 2_1:-57629648 | Msa0213900:CDS |
| CGCTTCTCTCTCTCTTCTGA+TGG | 0.424641 | 2_1:+57632389 | None:intergenic |
| TAAACCCTTCAAATGGAGAA+TGG | 0.428451 | 2_1:-57630741 | Msa0213900:CDS |
| GGGCACTTCTGGTCAACCCC+TGG | 0.433984 | 2_1:-57632457 | Msa0213900:CDS |
| TTCTTCTCTGAATTTGAGAT+AGG | 0.439595 | 2_1:+57629715 | None:intergenic |
| GCAGCCATTGACCGCATCCT+GGG | 0.441134 | 2_1:-57630171 | Msa0213900:CDS |
| AGCCAAGTTCATGAAATTGT+TGG | 0.441283 | 2_1:-57634385 | Msa0213900:CDS |
| TCAGTTGAGGTGCGAGCTGC+TGG | 0.441581 | 2_1:-57630310 | Msa0213900:CDS |
| TATACACTGTAGGGATTCAA+TGG | 0.445800 | 2_1:-57631039 | Msa0213900:intron |
| AGGTGATCAACTGAAAGAAA+TGG | 0.447767 | 2_1:-57630989 | Msa0213900:CDS |
| GAAATTGTTGGCCGCATCAA+TGG | 0.456665 | 2_1:-57634373 | Msa0213900:CDS |
| ACTTGGCTAGCAGCAGAGAA+TGG | 0.461952 | 2_1:-57630772 | Msa0213900:CDS |
| ATAGGTGATACCTTCTCATT+GGG | 0.464385 | 2_1:+57629796 | None:intergenic |
| AACCCACACTGCACAGGAAT+GGG | 0.466931 | 2_1:-57632339 | Msa0213900:CDS |
| CATGTCTGTAATTCCATACA+AGG | 0.479314 | 2_1:+57630516 | None:intergenic |
| GCATCAGTTGAAGTTGTTCA+AGG | 0.480286 | 2_1:-57630340 | Msa0213900:CDS |
| CTTGGCTAGCAGCAGAGAAT+GGG | 0.481359 | 2_1:-57630771 | Msa0213900:CDS |
| ACTGAGCAAGTTGAGAGAAA+AGG | 0.482087 | 2_1:-57631009 | Msa0213900:CDS |
| ATACATAGAACATAATCAAT+TGG | 0.483843 | 2_1:+57630117 | None:intergenic |
| GTCATCCATTCTCCATTTGA+AGG | 0.484027 | 2_1:+57630736 | None:intergenic |
| TGCCCATTCCTGTGCAGTGT+GGG | 0.484816 | 2_1:+57632337 | None:intergenic |
| GAACGCACCAGGTGATGTAT+AGG | 0.490137 | 2_1:+57634325 | None:intergenic |
| CAGAACAACTAAACATGGAA+TGG | 0.490631 | 2_1:-57630705 | Msa0213900:CDS |
| GTTGTCGTTCTTAGTGGAAG+TGG | 0.493017 | 2_1:-57630901 | Msa0213900:CDS |
| AATTACTTCTCGTGTGCTGT+TGG | 0.497919 | 2_1:-57629601 | Msa0213900:CDS |
| TGCACTTGTCACGTCTTTGA+GGG | 0.501613 | 2_1:-57632728 | Msa0213900:CDS |
| CTGTTGTTGAGGCACAGTTA+AGG | 0.503797 | 2_1:-57631843 | Msa0213900:CDS |
| TTCCACCACGGCTCGATACC+AGG | 0.511139 | 2_1:-57631810 | Msa0213900:CDS |
| AATTCTCCTTCTTGAGGTCA+AGG | 0.515724 | 2_1:+57629620 | None:intergenic |
| CAACCCACACTGCACAGGAA+TGG | 0.516601 | 2_1:-57632340 | Msa0213900:CDS |
| AAGAGAGAGAGAAGCGACAT+AGG | 0.520818 | 2_1:-57632382 | Msa0213900:CDS |
| GTTTGGAAAACTTCAAGCAA+GGG | 0.536146 | 2_1:-57630401 | Msa0213900:CDS |
| AGAACAACTAAACATGGAAT+GGG | 0.537694 | 2_1:-57630704 | Msa0213900:CDS |
| GCACCAAAAGAAGAAGGCTC+TGG | 0.541773 | 2_1:+57629859 | None:intergenic |
| CTTGTCACGTCTTTGAGGGA+TGG | 0.545621 | 2_1:-57632724 | Msa0213900:CDS |
| TTGGACCTGTGCAGAGATGT+TGG | 0.547598 | 2_1:+57630371 | None:intergenic |
| TGGTGCTGCGCAGTCTCTTG+GGG | 0.550088 | 2_1:-57632483 | Msa0213900:CDS |
| TGCTGTTCCTATACATCACC+TGG | 0.551899 | 2_1:-57634332 | Msa0213900:intron |
| ACGGTTGTTTCAATTCTGGA+TGG | 0.553293 | 2_1:+57630956 | None:intergenic |
| TCATCCATTCTCCATTTGAA+GGG | 0.557107 | 2_1:+57630737 | None:intergenic |
| AGACTTGCACCAAAAGAAGA+AGG | 0.558609 | 2_1:+57629853 | None:intergenic |
| CGTAACAACCCACACTGCAC+AGG | 0.559583 | 2_1:-57632345 | Msa0213900:CDS |
| CTGCCCATTCCTGTGCAGTG+TGG | 0.561509 | 2_1:+57632336 | None:intergenic |
| CATCAGTTGAAGTTGTTCAA+GGG | 0.563088 | 2_1:-57630339 | Msa0213900:CDS |
| CAGCCATTGACCGCATCCTG+GGG | 0.566239 | 2_1:-57630170 | Msa0213900:CDS |
| AGAAGTAATTCTCCTTCTTG+AGG | 0.568366 | 2_1:+57629614 | None:intergenic |
| AGTTTGGAAAACTTCAAGCA+AGG | 0.574644 | 2_1:-57630402 | Msa0213900:CDS |
| ATGCTCCAACATCTCTGCAC+AGG | 0.577000 | 2_1:-57630376 | Msa0213900:CDS |
| TCAAGGGAGCCGATCAGTTG+AGG | 0.579571 | 2_1:-57630323 | Msa0213900:CDS |
| ATTATTTATCTTTCAACCTG+AGG | 0.579721 | 2_1:+57629418 | None:intergenic |
| CAAGTCAGCAAATCAAAGCA+AGG | 0.587265 | 2_1:-57629746 | Msa0213900:CDS |
| GTATGGAATTACAGACATGC+AGG | 0.597305 | 2_1:-57630512 | Msa0213900:intron |
| GTCTTCCTGGTATCGAGCCG+TGG | 0.603768 | 2_1:+57631805 | None:intergenic |
| GCTAAATGATACTGTTGTTG+AGG | 0.603856 | 2_1:-57631854 | Msa0213900:CDS |
| TTCCAAATCTGCCATTGATG+CGG | 0.609653 | 2_1:+57634362 | None:intergenic |
| AGCTAAGTTTCCCAATGAGA+AGG | 0.609671 | 2_1:-57629806 | Msa0213900:CDS |
| GAATGTCCTTGACCTCAAGA+AGG | 0.612235 | 2_1:-57629626 | Msa0213900:CDS |
| CAGCTCGCACCTCAACTGAT+CGG | 0.613026 | 2_1:+57630314 | None:intergenic |
| AATGCCAGAACAACTAAACA+TGG | 0.613238 | 2_1:-57630710 | Msa0213900:CDS |
| TACACTTCCATCGTCTGACG+AGG | 0.614493 | 2_1:-57629554 | Msa0213900:CDS |
| CAGTGTGGGTTGTTACGTGA+TGG | 0.615607 | 2_1:+57632351 | None:intergenic |
| AAGTCAGCAAATCAAAGCAA+GGG | 0.617111 | 2_1:-57629745 | Msa0213900:CDS |
| TTCCTGGTATCGAGCCGTGG+TGG | 0.620755 | 2_1:+57631808 | None:intergenic |
| TCAGCAACCTCGTCAGACGA+TGG | 0.623696 | 2_1:+57629547 | None:intergenic |
| ATAATGTCAACCGCACGGCA+CGG | 0.631844 | 2_1:-57629684 | Msa0213900:CDS |
| AGCAAATAATGTCAACCGCA+CGG | 0.632433 | 2_1:-57629689 | Msa0213900:CDS |
| ACTTCAAAGAATATAACACT+TGG | 0.638884 | 2_1:-57630789 | Msa0213900:CDS |
| CTTTCTTCAAAATACGACCG+AGG | 0.656622 | 2_1:+57630548 | None:intergenic |
| GGAATGGGTTGACAGTGTAA+AGG | 0.661125 | 2_1:-57630689 | Msa0213900:intron |
| AGCCATTGACCGCATCCTGG+GGG | 0.664563 | 2_1:-57630169 | Msa0213900:CDS |
| TCATTGCAAAGTTGTGTCAA+CGG | 0.669329 | 2_1:+57630937 | None:intergenic |
| ACTTCACTGAAAGAACTCCT+CGG | 0.672914 | 2_1:-57630565 | Msa0213900:CDS |
| GCGAGCTGCTGGTGTTACAA+AGG | 0.677504 | 2_1:-57630299 | Msa0213900:intron |
| ATGTCTGTAATTCCATACAA+GGG | 0.694405 | 2_1:+57630517 | None:intergenic |
| ATTTACACTTCCGTGCCGTG+CGG | 0.713841 | 2_1:+57629674 | None:intergenic |
| GTGCGTTAAAGTCAAGAGTG+CGG | 0.721867 | 2_1:+57633772 | None:intergenic |
| GGACAAAACAAGTTCCACCA+CGG | 0.732660 | 2_1:-57631822 | Msa0213900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATTTCAAAATTTGAA+TGG | + | chr2_1:57632693-57632712 | None:intergenic | 10.0% |
| !! | ATGTAATTAAAAATATCAAA+GGG | + | chr2_1:57633205-57633224 | None:intergenic | 10.0% |
| !! | AATGTAATTAAAAATATCAA+AGG | + | chr2_1:57633206-57633225 | None:intergenic | 10.0% |
| !!! | TTTGATATTTTTAATTACAT+TGG | - | chr2_1:57633205-57633224 | Msa0213900:intron | 10.0% |
| !!! | AGAAATTGGATTTTTATTTT+GGG | - | chr2_1:57629709-57629728 | Msa0213900:CDS | 15.0% |
| !! | AGACTATTATTCATTAATAT+TGG | - | chr2_1:57630016-57630035 | Msa0213900:intron | 15.0% |
| !! | AAATAACATTTATAATGAAG+AGG | + | chr2_1:57630337-57630356 | None:intergenic | 15.0% |
| !!! | TTGAGCTTTAAAATATATAT+TGG | - | chr2_1:57630868-57630887 | Msa0213900:intron | 15.0% |
| !!! | TGAGCTTTAAAATATATATT+GGG | - | chr2_1:57630869-57630888 | Msa0213900:intron | 15.0% |
| !! | TTACATAATGATTCATAATT+TGG | - | chr2_1:57631614-57631633 | Msa0213900:intron | 15.0% |
| !! | TTAAGTAATTGTGAAATTAT+TGG | + | chr2_1:57634490-57634509 | None:intergenic | 15.0% |
| !! | CATATAAAAATCATGATCTA+AGG | - | chr2_1:57629520-57629539 | Msa0213900:CDS | 20.0% |
| !!! | GAGAAATTGGATTTTTATTT+TGG | - | chr2_1:57629708-57629727 | Msa0213900:CDS | 20.0% |
| !!! | TTAACTTGTTTTTTATACGA+AGG | - | chr2_1:57629760-57629779 | Msa0213900:CDS | 20.0% |
| !! | CAAAATAAAGAGCAAATATT+AGG | + | chr2_1:57630580-57630599 | None:intergenic | 20.0% |
| !! | TAAATTTAAAAGATTACGAG+TGG | + | chr2_1:57630797-57630816 | None:intergenic | 20.0% |
| !! | CAGGGAAATATAAATAAAAT+AGG | + | chr2_1:57630954-57630973 | None:intergenic | 20.0% |
| !!! | TTTTGTTGTTGTAAAATTTC+CGG | - | chr2_1:57631025-57631044 | Msa0213900:CDS | 20.0% |
| !! | TTATTTATTTGTAACGCTTT+AGG | - | chr2_1:57631810-57631829 | Msa0213900:CDS | 20.0% |
| !!! | AGTTAAAAGATTACTTTTTC+GGG | + | chr2_1:57632290-57632309 | None:intergenic | 20.0% |
| !!! | CAGTTAAAAGATTACTTTTT+CGG | + | chr2_1:57632291-57632310 | None:intergenic | 20.0% |
| !!! | GAAAAAGTAATCTTTTAACT+GGG | - | chr2_1:57632290-57632309 | Msa0213900:intron | 20.0% |
| !!! | CATTTTACTAAGTATTAACA+TGG | + | chr2_1:57632381-57632400 | None:intergenic | 20.0% |
| !! | TGTTAATACTTAGTAAAATG+TGG | - | chr2_1:57632381-57632400 | Msa0213900:CDS | 20.0% |
| !! | TAATTTCAAAATTTGAATGG+TGG | + | chr2_1:57632690-57632709 | None:intergenic | 20.0% |
| !! | TAAAAATATCAAAGGGAAAA+GGG | + | chr2_1:57633198-57633217 | None:intergenic | 20.0% |
| !! | TTAAAAATATCAAAGGGAAA+AGG | + | chr2_1:57633199-57633218 | None:intergenic | 20.0% |
| !!! | GACAATTTTTCATTTAATCA+GGG | - | chr2_1:57633628-57633647 | Msa0213900:intron | 20.0% |
| !! | ATACATAGAACATAATCAAT+TGG | + | chr2_1:57633709-57633728 | None:intergenic | 20.0% |
| !! | ATTGATTATGTTCTATGTAT+AGG | - | chr2_1:57633709-57633728 | Msa0213900:intron | 20.0% |
| !!! | TGAATCCATTTTTAATTGAT+GGG | + | chr2_1:57634059-57634078 | None:intergenic | 20.0% |
| !!! | TTGAATCCATTTTTAATTGA+TGG | + | chr2_1:57634060-57634079 | None:intergenic | 20.0% |
| !! | TTTCTTGTAATATAGTCATT+TGG | - | chr2_1:57634451-57634470 | Msa0213900:intron | 20.0% |
| ! | TAAATTAGTACTGTATACGA+TGG | + | chr2_1:57629570-57629589 | None:intergenic | 25.0% |
| ! | ATTTATACCAACACTTTCTT+TGG | - | chr2_1:57629680-57629699 | Msa0213900:CDS | 25.0% |
| !!! | AAACAAGTATTTGCCTTTTT+TGG | + | chr2_1:57630262-57630281 | None:intergenic | 25.0% |
| !! | AAAAAGGCAAATACTTGTTT+TGG | - | chr2_1:57630262-57630281 | Msa0213900:intron | 25.0% |
| ! | TTATAATGAAGAGGCTAAAA+AGG | + | chr2_1:57630328-57630347 | None:intergenic | 25.0% |
| !!! | TGATGTTTCACTTTTTGAAT+AGG | - | chr2_1:57630436-57630455 | Msa0213900:intron | 25.0% |
| ! | AAAAAACCTTGTTACTCTTT+CGG | - | chr2_1:57630601-57630620 | Msa0213900:intron | 25.0% |
| !! | TTTTATCACAGTACATAAAC+AGG | + | chr2_1:57630647-57630666 | None:intergenic | 25.0% |
| ! | TTTATGTACTGTGATAAAAG+TGG | - | chr2_1:57630648-57630667 | Msa0213900:intron | 25.0% |
| !!! | CTTTTGATAATTCTCTTACT+TGG | + | chr2_1:57630679-57630698 | None:intergenic | 25.0% |
| !! | CAACCAAAAATATGTTTTCA+CGG | - | chr2_1:57630771-57630790 | Msa0213900:CDS | 25.0% |
| !! | AATTTTACTACAGATCTTCT+GGG | + | chr2_1:57630824-57630843 | None:intergenic | 25.0% |
| !! | AAATTTTACTACAGATCTTC+TGG | + | chr2_1:57630825-57630844 | None:intergenic | 25.0% |
| ! | AATAGGATTTAATAGACTTG+AGG | + | chr2_1:57630937-57630956 | None:intergenic | 25.0% |
| ! | TTCTATATTTCAGTTATACC+AGG | - | chr2_1:57631232-57631251 | Msa0213900:intron | 25.0% |
| ! | TCTTATATATTCGAAGTTTG+TGG | - | chr2_1:57631551-57631570 | Msa0213900:intron | 25.0% |
| ! | AACAGAATAAGATACAATCA+AGG | + | chr2_1:57631735-57631754 | None:intergenic | 25.0% |
| !!! | TGTATCTTATTCTGTTGTTT+TGG | - | chr2_1:57631739-57631758 | Msa0213900:intron | 25.0% |
| !!! | GTATCTTATTCTGTTGTTTT+GGG | - | chr2_1:57631740-57631759 | Msa0213900:intron | 25.0% |
| ! | TAGGTTTAGGAATAAAAGAA+AGG | - | chr2_1:57631829-57631848 | Msa0213900:CDS | 25.0% |
| !! | AACTAATCGATTGCTTATTT+TGG | - | chr2_1:57632062-57632081 | Msa0213900:intron | 25.0% |
| ! | TTGACGATAAGTATTCAAAT+AGG | + | chr2_1:57632115-57632134 | None:intergenic | 25.0% |
| ! | AAACAAGGACTAAAAATACT+AGG | + | chr2_1:57632163-57632182 | None:intergenic | 25.0% |
| !! | CGAAAAAGTAATCTTTTAAC+TGG | - | chr2_1:57632289-57632308 | Msa0213900:intron | 25.0% |
| ! | TATGAAAGATTTGATTACCA+TGG | - | chr2_1:57632537-57632556 | Msa0213900:intron | 25.0% |
| ! | ATGAAAGATTTGATTACCAT+GGG | - | chr2_1:57632538-57632557 | Msa0213900:intron | 25.0% |
| !!! | GAATGTAATTTTAAGTGTGA+AGG | - | chr2_1:57632582-57632601 | Msa0213900:intron | 25.0% |
| ! | TATTAGACTTCATCAGATTA+AGG | - | chr2_1:57632608-57632627 | Msa0213900:intron | 25.0% |
| !! | AAAATAATGGAAAACAGCAT+TGG | + | chr2_1:57632643-57632662 | None:intergenic | 25.0% |
| !! | ATTGATGATATATACACTGT+AGG | - | chr2_1:57632774-57632793 | Msa0213900:intron | 25.0% |
| !! | TTGATGATATATACACTGTA+GGG | - | chr2_1:57632775-57632794 | Msa0213900:intron | 25.0% |
| ! | ACTTCAAAGAATATAACACT+TGG | - | chr2_1:57633034-57633053 | Msa0213900:intron | 25.0% |
| !!! | ATGTTTTTAAACCCTTCAAA+TGG | - | chr2_1:57633075-57633094 | Msa0213900:intron | 25.0% |
| ! | CAAAAATATGCTGAAAATAC+AGG | + | chr2_1:57633235-57633254 | None:intergenic | 25.0% |
| ! | GTAATGTCAGTAATTAGAAA+AGG | + | chr2_1:57633557-57633576 | None:intergenic | 25.0% |
| !! | CGACAATTTTTCATTTAATC+AGG | - | chr2_1:57633627-57633646 | Msa0213900:intron | 25.0% |
| ! | TAATCAATCTTGAATGATAC+GGG | + | chr2_1:57633868-57633887 | None:intergenic | 25.0% |
| ! | CTAATCAATCTTGAATGATA+CGG | + | chr2_1:57633869-57633888 | None:intergenic | 25.0% |
| ! | AAGATCCCATCAATTAAAAA+TGG | - | chr2_1:57634051-57634070 | Msa0213900:intron | 25.0% |
| ! | ATTATTTATCTTTCAACCTG+AGG | + | chr2_1:57634408-57634427 | None:intergenic | 25.0% |
| TGCTAATAGCTTAAGCTTAT+AGG | + | chr2_1:57629363-57629382 | None:intergenic | 30.0% | |
| ATAAGCTTAAGCTATTAGCA+AGG | - | chr2_1:57629363-57629382 | Msa0213900:three_prime_UTR | 30.0% | |
| TAAGCTTAAGCTATTAGCAA+GGG | - | chr2_1:57629364-57629383 | Msa0213900:three_prime_UTR | 30.0% | |
| TTGATCTGTTAATATGACAG+TGG | + | chr2_1:57629409-57629428 | None:intergenic | 30.0% | |
| !! | TTCTTTGGAATAGGAGAAAT+TGG | - | chr2_1:57629695-57629714 | Msa0213900:CDS | 30.0% |
| TATACGAAGGATAATGTGAA+AGG | - | chr2_1:57629773-57629792 | Msa0213900:CDS | 30.0% | |
| AACAAAAGTTCATCGAAAAC+TGG | - | chr2_1:57629817-57629836 | Msa0213900:CDS | 30.0% | |
| CATTAATATTGGATATCTGC+AGG | - | chr2_1:57630027-57630046 | Msa0213900:intron | 30.0% | |
| ! | TTTTTGCACATACAGACTAT+TGG | + | chr2_1:57630180-57630199 | None:intergenic | 30.0% |
| TCTTGTGGAATAAGTATCAT+AGG | - | chr2_1:57630288-57630307 | Msa0213900:intron | 30.0% | |
| !! | GTTTTAAATCATGCAGATCA+AGG | + | chr2_1:57630504-57630523 | None:intergenic | 30.0% |
| AAATTACCGAAAGAGTAACA+AGG | + | chr2_1:57630610-57630629 | None:intergenic | 30.0% | |
| GTTACTCTTTCGGTAATTTA+TGG | - | chr2_1:57630611-57630630 | Msa0213900:intron | 30.0% | |
| TATATATTGGGCATAGATGA+AGG | - | chr2_1:57630881-57630900 | Msa0213900:intron | 30.0% | |
| AAGAGACAATTGAGAATTCA+GGG | + | chr2_1:57630972-57630991 | None:intergenic | 30.0% | |
| TAAGAGACAATTGAGAATTC+AGG | + | chr2_1:57630973-57630992 | None:intergenic | 30.0% | |
| ATATGCTATAAGCAGAAAAC+CGG | + | chr2_1:57631047-57631066 | None:intergenic | 30.0% | |
| TGGATTTGACATCTGATATT+TGG | - | chr2_1:57631301-57631320 | Msa0213900:intron | 30.0% | |
| AAGTTTGTGGTTTACAATGA+GGG | - | chr2_1:57631564-57631583 | Msa0213900:intron | 30.0% | |
| !! | ACTTTGAAATGTAACTCTGA+AGG | - | chr2_1:57631649-57631668 | Msa0213900:intron | 30.0% |
| GGAGACGACTTTAATTAATT+AGG | + | chr2_1:57631714-57631733 | None:intergenic | 30.0% | |
| ! | ATTTGTAACGCTTTAGGTTT+AGG | - | chr2_1:57631816-57631835 | Msa0213900:CDS | 30.0% |
| TTTGAAGATAAGGATCATCA+TGG | + | chr2_1:57631937-57631956 | None:intergenic | 30.0% | |
| GCTGCAAATATTTGAAGATA+AGG | + | chr2_1:57631947-57631966 | None:intergenic | 30.0% | |
| ATATTGTTGAATTGTCTTCC+TGG | + | chr2_1:57632034-57632053 | None:intergenic | 30.0% | |
| TTATGGTAAATTTCCCCATT+GGG | + | chr2_1:57632320-57632339 | None:intergenic | 30.0% | |
| TTTATGGTAAATTTCCCCAT+TGG | + | chr2_1:57632321-57632340 | None:intergenic | 30.0% | |
| ! | TTTGGAGTCATGTCAATTTA+TGG | + | chr2_1:57632337-57632356 | None:intergenic | 30.0% |
| !! | TTCTGCTGTTTGTAAGATTT+TGG | + | chr2_1:57632355-57632374 | None:intergenic | 30.0% |
| TTATAGCTGCTTATTGAAGA+CGG | - | chr2_1:57632408-57632427 | Msa0213900:CDS | 30.0% | |
| GATTCCTTGATTAATCTCTT+AGG | + | chr2_1:57632490-57632509 | None:intergenic | 30.0% | |
| TAATCACAAGAAGTTAGAAG+TGG | + | chr2_1:57633010-57633029 | None:intergenic | 30.0% | |
| AGAACAACTAAACATGGAAT+GGG | - | chr2_1:57633119-57633138 | Msa0213900:intron | 30.0% | |
| ATGTCTGTAATTCCATACAA+GGG | + | chr2_1:57633309-57633328 | None:intergenic | 30.0% | |
| ACAATCATAGATGTTGAGTT+TGG | - | chr2_1:57633405-57633424 | Msa0213900:intron | 30.0% | |
| ! | TCAACTGATGCATTTGAAAT+TGG | + | chr2_1:57633474-57633493 | None:intergenic | 30.0% |
| ! | TCTATGTATAGGACATTTTC+TGG | - | chr2_1:57633720-57633739 | Msa0213900:intron | 30.0% |
| TTAATTGATGGGATCTTCAT+AGG | + | chr2_1:57634048-57634067 | None:intergenic | 30.0% | |
| ! | TTCTTCTCTGAATTTGAGAT+AGG | + | chr2_1:57634111-57634130 | None:intergenic | 30.0% |
| !!! | TAGTTTTTGATGGTCTTGTA+AGG | - | chr2_1:57634523-57634542 | Msa0213900:intron | 30.0% |
| TAAGCTATTAGCAAGGGATA+AGG | - | chr2_1:57629370-57629389 | Msa0213900:three_prime_UTR | 35.0% | |
| AGCCAAGTTCATGAAATTGT+TGG | - | chr2_1:57629438-57629457 | Msa0213900:three_prime_UTR | 35.0% | |
| ! | GATTTTTATATGAACGCACC+AGG | + | chr2_1:57629512-57629531 | None:intergenic | 35.0% |
| ! | CATCAAGTGATCTAGTTCAT+TGG | - | chr2_1:57629615-57629634 | Msa0213900:CDS | 35.0% |
| !! | ACCAACACTTTCTTTGGAAT+AGG | - | chr2_1:57629686-57629705 | Msa0213900:CDS | 35.0% |
| ! | TCCTATTCCAAAGAAAGTGT+TGG | + | chr2_1:57629690-57629709 | None:intergenic | 35.0% |
| ATGTATGCTCAGTATCTGAT+AGG | - | chr2_1:57629868-57629887 | Msa0213900:CDS | 35.0% | |
| TGACATCAGAAGTTATTCAC+AGG | + | chr2_1:57630145-57630164 | None:intergenic | 35.0% | |
| ATAGCCTGTGTGAATAACTT+TGG | - | chr2_1:57630199-57630218 | Msa0213900:intron | 35.0% | |
| ACATCCAAAGTTATTCACAC+AGG | + | chr2_1:57630206-57630225 | None:intergenic | 35.0% | |
| GCACTTACATTCACCAAAAA+AGG | - | chr2_1:57630246-57630265 | Msa0213900:intron | 35.0% | |
| TGTGGAATAAGTATCATAGG+CGG | - | chr2_1:57630291-57630310 | Msa0213900:intron | 35.0% | |
| TATGACTGCTTACAGACATT+TGG | + | chr2_1:57630406-57630425 | None:intergenic | 35.0% | |
| GATAGCGAAATAGAATCAGA+TGG | - | chr2_1:57630704-57630723 | Msa0213900:CDS | 35.0% | |
| ! | TGGCCGTGAAAACATATTTT+TGG | + | chr2_1:57630777-57630796 | None:intergenic | 35.0% |
| AGCCTGTCAAGAAAAAAAGA+AGG | - | chr2_1:57631149-57631168 | Msa0213900:intron | 35.0% | |
| GCCTGTCAAGAAAAAAAGAA+GGG | - | chr2_1:57631150-57631169 | Msa0213900:intron | 35.0% | |
| CCTGTCAAGAAAAAAAGAAG+GGG | - | chr2_1:57631151-57631170 | Msa0213900:intron | 35.0% | |
| CTGTCAAGAAAAAAAGAAGG+GGG | - | chr2_1:57631152-57631171 | Msa0213900:intron | 35.0% | |
| GAAGTTTGTGGTTTACAATG+AGG | - | chr2_1:57631563-57631582 | Msa0213900:intron | 35.0% | |
| !!! | AGGCTCTTTTAAAATGTCAC+TGG | - | chr2_1:57631669-57631688 | Msa0213900:intron | 35.0% |
| GAAGTATGACATGAAGGAAT+AGG | - | chr2_1:57631882-57631901 | Msa0213900:intron | 35.0% | |
| GCTAAATGATACTGTTGTTG+AGG | - | chr2_1:57631969-57631988 | Msa0213900:intron | 35.0% | |
| AGGCGAAGAAAGATAGTTAA+AGG | + | chr2_1:57632143-57632162 | None:intergenic | 35.0% | |
| !! | TTTTAACTGGGAATACCCAA+TGG | - | chr2_1:57632302-57632321 | Msa0213900:intron | 35.0% |
| TTTAACTGGGAATACCCAAT+GGG | - | chr2_1:57632303-57632322 | Msa0213900:intron | 35.0% | |
| GCATCCTAAGAGATTAATCA+AGG | - | chr2_1:57632483-57632502 | Msa0213900:CDS | 35.0% | |
| !! | TTCCATTATTTTGCAAACCC+TGG | - | chr2_1:57632651-57632670 | Msa0213900:intron | 35.0% |
| TTCCAGGGTTTGCAAAATAA+TGG | + | chr2_1:57632656-57632675 | None:intergenic | 35.0% | |
| TATACACTGTAGGGATTCAA+TGG | - | chr2_1:57632784-57632803 | Msa0213900:intron | 35.0% | |
| AGGTGATCAACTGAAAGAAA+TGG | - | chr2_1:57632834-57632853 | Msa0213900:intron | 35.0% | |
| TCATTGCAAAGTTGTGTCAA+CGG | + | chr2_1:57632889-57632908 | None:intergenic | 35.0% | |
| AGAACGACAACTGTAGTATT+TGG | + | chr2_1:57632913-57632932 | None:intergenic | 35.0% | |
| TAAACCCTTCAAATGGAGAA+TGG | - | chr2_1:57633082-57633101 | Msa0213900:intron | 35.0% | |
| TCATCCATTCTCCATTTGAA+GGG | + | chr2_1:57633089-57633108 | None:intergenic | 35.0% | |
| AATGCCAGAACAACTAAACA+TGG | - | chr2_1:57633113-57633132 | Msa0213900:intron | 35.0% | |
| CATTCCATGTTTAGTTGTTC+TGG | + | chr2_1:57633120-57633139 | None:intergenic | 35.0% | |
| CAGAACAACTAAACATGGAA+TGG | - | chr2_1:57633118-57633137 | Msa0213900:intron | 35.0% | |
| !! | TCGGTCGTATTTTGAAGAAA+GGG | - | chr2_1:57633277-57633296 | Msa0213900:intron | 35.0% |
| CATGTCTGTAATTCCATACA+AGG | + | chr2_1:57633310-57633329 | None:intergenic | 35.0% | |
| TGTGTGAGAGAATTAGTAAC+TGG | + | chr2_1:57633388-57633407 | None:intergenic | 35.0% | |
| AGTTTGGAAAACTTCAAGCA+AGG | - | chr2_1:57633421-57633440 | Msa0213900:intron | 35.0% | |
| GTTTGGAAAACTTCAAGCAA+GGG | - | chr2_1:57633422-57633441 | Msa0213900:intron | 35.0% | |
| CATCAGTTGAAGTTGTTCAA+GGG | - | chr2_1:57633484-57633503 | Msa0213900:intron | 35.0% | |
| !! | TATAGGACATTTTCTGGCAA+AGG | - | chr2_1:57633726-57633745 | Msa0213900:intron | 35.0% |
| AACTGCAAACATGCTTGATA+AGG | + | chr2_1:57633820-57633839 | None:intergenic | 35.0% | |
| TTAACATTATTGATCGCAGC+AGG | - | chr2_1:57633915-57633934 | Msa0213900:intron | 35.0% | |
| ATAGGTGATACCTTCTCATT+GGG | + | chr2_1:57634030-57634049 | None:intergenic | 35.0% | |
| AAGTCAGCAAATCAAAGCAA+GGG | - | chr2_1:57634078-57634097 | Msa0213900:intron | 35.0% | |
| ! | ACATTCCAAGAGATCTTTTC+TGG | + | chr2_1:57634183-57634202 | None:intergenic | 35.0% |
| AGAAGTAATTCTCCTTCTTG+AGG | + | chr2_1:57634212-57634231 | None:intergenic | 35.0% | |
| ! | CATCGACATGTAGTTTTTGA+TGG | - | chr2_1:57634513-57634532 | Msa0213900:intron | 35.0% |
| !! | TGTGTTTTTGTTGCGAGTCT+TGG | - | chr2_1:57629289-57629308 | Msa0213900:three_prime_UTR | 40.0% |
| !! | GTGTTTTTGTTGCGAGTCTT+GGG | - | chr2_1:57629290-57629309 | Msa0213900:three_prime_UTR | 40.0% |
| GGCCAACAATTTCATGAACT+TGG | + | chr2_1:57629443-57629462 | None:intergenic | 40.0% | |
| TTCCAAATCTGCCATTGATG+CGG | + | chr2_1:57629464-57629483 | None:intergenic | 40.0% | |
| ! | GTGATCTAGTTCATTGGTAC+TGG | - | chr2_1:57629621-57629640 | Msa0213900:CDS | 40.0% |
| AAGTTCATCGAAAACTGGAG+AGG | - | chr2_1:57629822-57629841 | Msa0213900:CDS | 40.0% | |
| CAGTATCTGATAGGTTCTTG+AGG | - | chr2_1:57629877-57629896 | Msa0213900:CDS | 40.0% | |
| AAACAGCATAGAATGCACCA+GGG | + | chr2_1:57629987-57630006 | None:intergenic | 40.0% | |
| TAAACAGCATAGAATGCACC+AGG | + | chr2_1:57629988-57630007 | None:intergenic | 40.0% | |
| ! | GGTGCATTCTATGCTGTTTA+TGG | - | chr2_1:57629988-57630007 | Msa0213900:intron | 40.0% |
| !!! | TACTTGTTTTGGTGCTCTTG+TGG | - | chr2_1:57630273-57630292 | Msa0213900:intron | 40.0% |
| CATGCATGTAGGGGAAAAAA+AGG | + | chr2_1:57630368-57630387 | None:intergenic | 40.0% | |
| TGGAGATGCTTCACATTTGT+AGG | + | chr2_1:57630472-57630491 | None:intergenic | 40.0% | |
| ! | AGGTATGTGCTGTTGCAATA+TGG | - | chr2_1:57630901-57630920 | Msa0213900:CDS | 40.0% |
| !!! | CCCCTTCTTTTTTTCTTGAC+AGG | + | chr2_1:57631154-57631173 | None:intergenic | 40.0% |
| ! | GCTTTGAGTGGCATAAAGTA+GGG | - | chr2_1:57631254-57631273 | Msa0213900:intron | 40.0% |
| CTTTGAGTGGCATAAAGTAG+GGG | - | chr2_1:57631255-57631274 | Msa0213900:intron | 40.0% | |
| ATAAAGTAGGGGATAGCAGA+TGG | - | chr2_1:57631266-57631285 | Msa0213900:intron | 40.0% | |
| ! | TTGGTGTTCTTGTAGTTTGC+TGG | - | chr2_1:57631320-57631339 | Msa0213900:intron | 40.0% |
| !!! | CAACTTTTGAGATGTTCCAG+GGG | + | chr2_1:57631385-57631404 | None:intergenic | 40.0% |
| !!! | GCAACTTTTGAGATGTTCCA+GGG | + | chr2_1:57631386-57631405 | None:intergenic | 40.0% |
| ! | AATGGGCAGAAACTTTTGTG+AGG | - | chr2_1:57631501-57631520 | Msa0213900:intron | 40.0% |
| !! | TGAGGGTGTTGTATCTTATC+AGG | - | chr2_1:57631581-57631600 | Msa0213900:intron | 40.0% |
| !! | GAGGGTGTTGTATCTTATCA+GGG | - | chr2_1:57631582-57631601 | Msa0213900:intron | 40.0% |
| ! | GGAATAAAAGAAAGGCATGC+AGG | - | chr2_1:57631837-57631856 | Msa0213900:CDS | 40.0% |
| TGCACTGAAGTATGACATGA+AGG | - | chr2_1:57631876-57631895 | Msa0213900:intron | 40.0% | |
| TCACTCTTGCTAAAGTAGCT+GGG | + | chr2_1:57632198-57632217 | None:intergenic | 40.0% | |
| TTCACTCTTGCTAAAGTAGC+TGG | + | chr2_1:57632199-57632218 | None:intergenic | 40.0% | |
| TTAACTGGGAATACCCAATG+GGG | - | chr2_1:57632304-57632323 | Msa0213900:intron | 40.0% | |
| ACAAATCTACCTCACTCATC+AGG | + | chr2_1:57632442-57632461 | None:intergenic | 40.0% | |
| TCAGTAAGACATATCTCCCA+TGG | + | chr2_1:57632557-57632576 | None:intergenic | 40.0% | |
| !! | GTGGTGATGTTTTTGTTCCA+GGG | + | chr2_1:57632671-57632690 | None:intergenic | 40.0% |
| ! | ACTGAGCAAGTTGAGAGAAA+AGG | - | chr2_1:57632814-57632833 | Msa0213900:intron | 40.0% |
| ! | ACGGTTGTTTCAATTCTGGA+TGG | + | chr2_1:57632870-57632889 | None:intergenic | 40.0% |
| ! | GTCAACGGTTGTTTCAATTC+TGG | + | chr2_1:57632874-57632893 | None:intergenic | 40.0% |
| ACTACAGTTGTCGTTCTTAG+TGG | - | chr2_1:57632916-57632935 | Msa0213900:intron | 40.0% | |
| TTCCATCTTTGCGAACTACT+AGG | - | chr2_1:57632983-57633002 | Msa0213900:intron | 40.0% | |
| GTCATCCATTCTCCATTTGA+AGG | + | chr2_1:57633090-57633109 | None:intergenic | 40.0% | |
| ACTTCACTGAAAGAACTCCT+CGG | - | chr2_1:57633258-57633277 | Msa0213900:intron | 40.0% | |
| CTTTCTTCAAAATACGACCG+AGG | + | chr2_1:57633278-57633297 | None:intergenic | 40.0% | |
| !! | CTCGGTCGTATTTTGAAGAA+AGG | - | chr2_1:57633276-57633295 | Msa0213900:intron | 40.0% |
| GTATGGAATTACAGACATGC+AGG | - | chr2_1:57633311-57633330 | Msa0213900:intron | 40.0% | |
| GCATCAGTTGAAGTTGTTCA+AGG | - | chr2_1:57633483-57633502 | Msa0213900:intron | 40.0% | |
| AGACTTGCACCAAAAGAAGA+AGG | + | chr2_1:57633973-57633992 | None:intergenic | 40.0% | |
| AGCTAAGTTTCCCAATGAGA+AGG | - | chr2_1:57634017-57634036 | Msa0213900:intron | 40.0% | |
| CATAGGTGATACCTTCTCAT+TGG | + | chr2_1:57634031-57634050 | None:intergenic | 40.0% | |
| CAAGTCAGCAAATCAAAGCA+AGG | - | chr2_1:57634077-57634096 | Msa0213900:intron | 40.0% | |
| AGCAAATAATGTCAACCGCA+CGG | - | chr2_1:57634134-57634153 | Msa0213900:intron | 40.0% | |
| !! | CAAGAGATCTTTTCTGGCAA+AGG | + | chr2_1:57634177-57634196 | None:intergenic | 40.0% |
| CTTTGCCAGAAAAGATCTCT+TGG | - | chr2_1:57634175-57634194 | Msa0213900:intron | 40.0% | |
| AATTCTCCTTCTTGAGGTCA+AGG | + | chr2_1:57634206-57634225 | None:intergenic | 40.0% | |
| AATTACTTCTCGTGTGCTGT+TGG | - | chr2_1:57634222-57634241 | Msa0213900:intron | 40.0% | |
| GAAATTGTTGGCCGCATCAA+TGG | - | chr2_1:57629450-57629469 | Msa0213900:three_prime_UTR | 45.0% | |
| TGCTGTTCCTATACATCACC+TGG | - | chr2_1:57629491-57629510 | Msa0213900:exon | 45.0% | |
| AACAGCATAGAATGCACCAG+GGG | + | chr2_1:57629986-57630005 | None:intergenic | 45.0% | |
| GTGCGTTAAAGTCAAGAGTG+CGG | + | chr2_1:57630054-57630073 | None:intergenic | 45.0% | |
| TGTGCTTTGTACGCTGTTAC+AGG | - | chr2_1:57630076-57630095 | Msa0213900:intron | 45.0% | |
| AGACGAGTTCATGCATGTAG+GGG | + | chr2_1:57630377-57630396 | None:intergenic | 45.0% | |
| CAGACGAGTTCATGCATGTA+GGG | + | chr2_1:57630378-57630397 | None:intergenic | 45.0% | |
| GCAGATCAAGGTGAGACTAT+TGG | + | chr2_1:57630492-57630511 | None:intergenic | 45.0% | |
| TTGCACTTGTCACGTCTTTG+AGG | - | chr2_1:57631094-57631113 | Msa0213900:intron | 45.0% | |
| TGCACTTGTCACGTCTTTGA+GGG | - | chr2_1:57631095-57631114 | Msa0213900:intron | 45.0% | |
| !! | CAGTTATACCAGGCTTTGAG+TGG | - | chr2_1:57631242-57631261 | Msa0213900:intron | 45.0% |
| ACTTTATGCCACTCAAAGCC+TGG | + | chr2_1:57631253-57631272 | None:intergenic | 45.0% | |
| !! | GGCTTTGAGTGGCATAAAGT+AGG | - | chr2_1:57631253-57631272 | Msa0213900:intron | 45.0% |
| GCAGATGGATGATAAGCTAG+TGG | - | chr2_1:57631281-57631300 | Msa0213900:intron | 45.0% | |
| !!! | GGCAACTTTTGAGATGTTCC+AGG | + | chr2_1:57631387-57631406 | None:intergenic | 45.0% |
| ! | CAGAGCTTTGGCAATTGCTT+CGG | + | chr2_1:57631408-57631427 | None:intergenic | 45.0% |
| TGATGGCATGTTCAGAGCTT+TGG | + | chr2_1:57631420-57631439 | None:intergenic | 45.0% | |
| AAGAGAGAGAGAAGCGACAT+AGG | - | chr2_1:57631441-57631460 | Msa0213900:intron | 45.0% | |
| CTGTTGTTGAGGCACAGTTA+AGG | - | chr2_1:57631980-57631999 | Msa0213900:intron | 45.0% | |
| GGACAAAACAAGTTCCACCA+CGG | - | chr2_1:57632001-57632020 | Msa0213900:intron | 45.0% | |
| TTGCTAAAGTAGCTGGGTAG+GGG | + | chr2_1:57632192-57632211 | None:intergenic | 45.0% | |
| CTTGCTAAAGTAGCTGGGTA+GGG | + | chr2_1:57632193-57632212 | None:intergenic | 45.0% | |
| TCTTGCTAAAGTAGCTGGGT+AGG | + | chr2_1:57632194-57632213 | None:intergenic | 45.0% | |
| ACTTGTTCAGAGTCGCACAT+TGG | - | chr2_1:57632253-57632272 | Msa0213900:intron | 45.0% | |
| TCAGAGTCGCACATTGGATA+TGG | - | chr2_1:57632259-57632278 | Msa0213900:intron | 45.0% | |
| GACAAGTTTCCTGATGAGTG+AGG | - | chr2_1:57632430-57632449 | Msa0213900:CDS | 45.0% | |
| !! | GGTGGTGATGTTTTTGTTCC+AGG | + | chr2_1:57632672-57632691 | None:intergenic | 45.0% |
| GTTGTCGTTCTTAGTGGAAG+TGG | - | chr2_1:57632922-57632941 | Msa0213900:intron | 45.0% | |
| GACCTAGTAGTTCGCAAAGA+TGG | + | chr2_1:57632988-57633007 | None:intergenic | 45.0% | |
| !! | GGAATGGGTTGACAGTGTAA+AGG | - | chr2_1:57633134-57633153 | Msa0213900:intron | 45.0% |
| AAAGGGAAGCTTCCCTTGTA+TGG | - | chr2_1:57633294-57633313 | Msa0213900:intron | 45.0% | |
| GAATGTCCTTGACCTCAAGA+AGG | - | chr2_1:57634197-57634216 | Msa0213900:intron | 45.0% | |
| ! | CTTAGCAATGTTGCTTCCTC+AGG | - | chr2_1:57634389-57634408 | Msa0213900:CDS | 45.0% |
| !! | TATTTAACAAAAAATTAAAA+AGG | + | chr2_1:57629332-57629351 | None:intergenic | 5.0% |
| GAACGCACCAGGTGATGTAT+AGG | + | chr2_1:57629501-57629520 | None:intergenic | 50.0% | |
| CTTCCAAATGCTACATCCCC+TGG | - | chr2_1:57629967-57629986 | Msa0213900:intron | 50.0% | |
| CCAGACGAGTTCATGCATGT+AGG | + | chr2_1:57630379-57630398 | None:intergenic | 50.0% | |
| CCTACATGCATGAACTCGTC+TGG | - | chr2_1:57630376-57630395 | Msa0213900:CDS | 50.0% | |
| ! | CTTGTCACGTCTTTGAGGGA+TGG | - | chr2_1:57631099-57631118 | Msa0213900:intron | 50.0% |
| CGCTTCTCTCTCTCTTCTGA+TGG | + | chr2_1:57631437-57631456 | None:intergenic | 50.0% | |
| ! | CAGTGTGGGTTGTTACGTGA+TGG | + | chr2_1:57631475-57631494 | None:intergenic | 50.0% |
| AACCCACACTGCACAGGAAT+GGG | - | chr2_1:57631484-57631503 | Msa0213900:intron | 50.0% | |
| GGGTAGGGGACAATCAAACA+AGG | + | chr2_1:57632178-57632197 | None:intergenic | 50.0% | |
| GTCGCACATTGGATATGGCA+TGG | - | chr2_1:57632264-57632283 | Msa0213900:intron | 50.0% | |
| ACTTGGCTAGCAGCAGAGAA+TGG | - | chr2_1:57633051-57633070 | Msa0213900:intron | 50.0% | |
| CTTGGCTAGCAGCAGAGAAT+GGG | - | chr2_1:57633052-57633071 | Msa0213900:intron | 50.0% | |
| ATGCTCCAACATCTCTGCAC+AGG | - | chr2_1:57633447-57633466 | Msa0213900:intron | 50.0% | |
| TTGGACCTGTGCAGAGATGT+TGG | + | chr2_1:57633455-57633474 | None:intergenic | 50.0% | |
| TACTGTGAACAATCTCCCCC+AGG | + | chr2_1:57633672-57633691 | None:intergenic | 50.0% | |
| ! | GAGCCAGAGCCTTCTTCTTT+TGG | - | chr2_1:57633961-57633980 | Msa0213900:intron | 50.0% |
| GCACCAAAAGAAGAAGGCTC+TGG | + | chr2_1:57633967-57633986 | None:intergenic | 50.0% | |
| ATAATGTCAACCGCACGGCA+CGG | - | chr2_1:57634139-57634158 | Msa0213900:intron | 50.0% | |
| ATTTACACTTCCGTGCCGTG+CGG | + | chr2_1:57634152-57634171 | None:intergenic | 50.0% | |
| TACACTTCCATCGTCTGACG+AGG | - | chr2_1:57634269-57634288 | Msa0213900:intron | 50.0% | |
| GGCCGCATCAATGGCAGATT+TGG | - | chr2_1:57629459-57629478 | Msa0213900:three_prime_UTR | 55.0% | |
| GCACCAGGGGATGTAGCATT+TGG | + | chr2_1:57629973-57629992 | None:intergenic | 55.0% | |
| CGTAACAACCCACACTGCAC+AGG | - | chr2_1:57631478-57631497 | Msa0213900:intron | 55.0% | |
| CAACCCACACTGCACAGGAA+TGG | - | chr2_1:57631483-57631502 | Msa0213900:intron | 55.0% | |
| TGCCCATTCCTGTGCAGTGT+GGG | + | chr2_1:57631489-57631508 | None:intergenic | 55.0% | |
| TCAAGGGAGCCGATCAGTTG+AGG | - | chr2_1:57633500-57633519 | Msa0213900:intron | 55.0% | |
| CAGCTCGCACCTCAACTGAT+CGG | + | chr2_1:57633512-57633531 | None:intergenic | 55.0% | |
| !! | GCGAGCTGCTGGTGTTACAA+AGG | - | chr2_1:57633524-57633543 | Msa0213900:intron | 55.0% |
| GAACAATCTCCCCCAGGATG+CGG | + | chr2_1:57633666-57633685 | None:intergenic | 55.0% | |
| TCAGCAACCTCGTCAGACGA+TGG | + | chr2_1:57634279-57634298 | None:intergenic | 55.0% | |
| !! | CTGGTGCTGCGCAGTCTCTT+GGG | - | chr2_1:57631339-57631358 | Msa0213900:intron | 60.0% |
| !! | TGGTGCTGCGCAGTCTCTTG+GGG | - | chr2_1:57631340-57631359 | Msa0213900:intron | 60.0% |
| CTGCCCATTCCTGTGCAGTG+TGG | + | chr2_1:57631490-57631509 | None:intergenic | 60.0% | |
| TTCCACCACGGCTCGATACC+AGG | - | chr2_1:57632013-57632032 | Msa0213900:intron | 60.0% | |
| ! | TTCCTGGTATCGAGCCGTGG+TGG | + | chr2_1:57632018-57632037 | None:intergenic | 60.0% |
| ! | GTCTTCCTGGTATCGAGCCG+TGG | + | chr2_1:57632021-57632040 | None:intergenic | 60.0% |
| TCAGTTGAGGTGCGAGCTGC+TGG | - | chr2_1:57633513-57633532 | Msa0213900:intron | 60.0% | |
| AGCAGCCATTGACCGCATCC+TGG | - | chr2_1:57633651-57633670 | Msa0213900:intron | 60.0% | |
| GCAGCCATTGACCGCATCCT+GGG | - | chr2_1:57633652-57633671 | Msa0213900:intron | 60.0% | |
| CAGCCATTGACCGCATCCTG+GGG | - | chr2_1:57633653-57633672 | Msa0213900:intron | 60.0% | |
| AGCCATTGACCGCATCCTGG+GGG | - | chr2_1:57633654-57633673 | Msa0213900:intron | 60.0% | |
| !! | GCTGGTGCTGCGCAGTCTCT+TGG | - | chr2_1:57631338-57631357 | Msa0213900:intron | 65.0% |
| CTGCGCAGTCTCTTGGGGCT+GGG | - | chr2_1:57631345-57631364 | Msa0213900:intron | 65.0% | |
| TGCGCAGTCTCTTGGGGCTG+GGG | - | chr2_1:57631346-57631365 | Msa0213900:intron | 65.0% | |
| ! | TCTTGGGGCTGGGGCACTTC+TGG | - | chr2_1:57631355-57631374 | Msa0213900:intron | 65.0% |
| GGGCACTTCTGGTCAACCCC+TGG | - | chr2_1:57631366-57631385 | Msa0213900:intron | 65.0% | |
| CTCCCCCAGGATGCGGTCAA+TGG | + | chr2_1:57633659-57633678 | None:intergenic | 65.0% | |
| GCTGCGCAGTCTCTTGGGGC+TGG | - | chr2_1:57631344-57631363 | Msa0213900:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 57629258 | 57634587 | 57629258 | ID=Msa0213900;Name=Msa0213900 |
| chr2_1 | mRNA | 57629258 | 57634587 | 57629258 | ID=Msa0213900-mRNA-1;Parent=Msa0213900;Name=Msa0213900-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.81|0.75|1|1|1|12|246|531 |
| chr2_1 | exon | 57629258 | 57629911 | 57629258 | ID=Msa0213900-mRNA-1:exon:15959;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57630098 | 57630196 | 57630098 | ID=Msa0213900-mRNA-1:exon:15958;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57630300 | 57630430 | 57630300 | ID=Msa0213900-mRNA-1:exon:15957;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57630513 | 57630600 | 57630513 | ID=Msa0213900-mRNA-1:exon:15956;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57630690 | 57630812 | 57630690 | ID=Msa0213900-mRNA-1:exon:15955;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57630882 | 57631049 | 57630882 | ID=Msa0213900-mRNA-1:exon:15954;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57631762 | 57631879 | 57631762 | ID=Msa0213900-mRNA-1:exon:15953;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57632323 | 57632510 | 57632323 | ID=Msa0213900-mRNA-1:exon:15952;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57632654 | 57632754 | 57632654 | ID=Msa0213900-mRNA-1:exon:15951;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57633748 | 57633796 | 57633748 | ID=Msa0213900-mRNA-1:exon:15950;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57634333 | 57634421 | 57634333 | ID=Msa0213900-mRNA-1:exon:15949;Parent=Msa0213900-mRNA-1 |
| chr2_1 | exon | 57634554 | 57634587 | 57634554 | ID=Msa0213900-mRNA-1:exon:15948;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57634554 | 57634587 | 57634554 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57634333 | 57634421 | 57634333 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57633748 | 57633796 | 57633748 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57632654 | 57632754 | 57632654 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57632323 | 57632510 | 57632323 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57631762 | 57631879 | 57631762 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57630882 | 57631049 | 57630882 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57630690 | 57630812 | 57630690 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57630513 | 57630600 | 57630513 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57630300 | 57630430 | 57630300 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57630098 | 57630196 | 57630098 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | CDS | 57629504 | 57629911 | 57629504 | ID=Msa0213900-mRNA-1:cds;Parent=Msa0213900-mRNA-1 |
| chr2_1 | three_prime_UTR | 57629258 | 57629503 | 57629258 | ID=Msa0213900-mRNA-1:three_prime_utr;Parent=Msa0213900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
