Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0221720 | XP_003597187.1 | 96.273 | 161 | 6 | 0 | 1 | 161 | 1 | 161 | 3.69e-111 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0221720 | sp|Q8GYD1|PDI51_ARATH | 69.286 | 140 | 39 | 2 | 25 | 161 | 8 | 146 | 7.15e-69 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0221720 | Q2HSV2 | 96.273 | 161 | 6 | 0 | 1 | 161 | 1 | 161 | 1.76e-111 | 323 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0221720 | Msa1140430 | 0.801710 | 7.918883e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0221720 | MtrunA17_Chr2g0326241 | 96.273 | 161 | 6 | 0 | 1 | 161 | 1 | 161 | 3.39e-115 | 323 |
| Msa0221720 | MtrunA17_Chr7g0271721 | 36.220 | 127 | 77 | 3 | 17 | 142 | 4 | 127 | 1.52e-20 | 86.3 |
| Msa0221720 | MtrunA17_Chr7g0271721 | 32.727 | 110 | 67 | 3 | 34 | 142 | 139 | 242 | 3.07e-12 | 63.2 |
| Msa0221720 | MtrunA17_Chr5g0438731 | 29.054 | 148 | 96 | 5 | 7 | 147 | 21 | 166 | 1.09e-16 | 76.3 |
| Msa0221720 | MtrunA17_Chr5g0438731 | 29.167 | 120 | 82 | 2 | 37 | 155 | 188 | 305 | 2.58e-16 | 75.1 |
| Msa0221720 | MtrunA17_Chr1g0194961 | 36.538 | 104 | 64 | 2 | 44 | 146 | 34 | 136 | 2.98e-16 | 74.7 |
| Msa0221720 | MtrunA17_Chr1g0194961 | 30.476 | 105 | 72 | 1 | 39 | 142 | 147 | 251 | 1.69e-15 | 72.4 |
| Msa0221720 | MtrunA17_Chr2g0287471 | 28.906 | 128 | 86 | 3 | 21 | 145 | 7 | 132 | 2.38e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0221720 | AT1G07960.4 | 69.286 | 140 | 39 | 2 | 25 | 161 | 8 | 146 | 7.27e-70 | 208 |
| Msa0221720 | AT1G07960.3 | 69.286 | 140 | 39 | 2 | 25 | 161 | 8 | 146 | 7.27e-70 | 208 |
| Msa0221720 | AT1G07960.1 | 69.286 | 140 | 39 | 2 | 25 | 161 | 8 | 146 | 7.27e-70 | 208 |
| Msa0221720 | AT1G07960.2 | 69.286 | 140 | 39 | 2 | 25 | 161 | 8 | 146 | 7.27e-70 | 208 |
| Msa0221720 | AT2G47470.3 | 36.538 | 104 | 64 | 2 | 44 | 146 | 28 | 130 | 3.14e-17 | 77.4 |
| Msa0221720 | AT2G47470.3 | 30.000 | 110 | 74 | 2 | 34 | 142 | 138 | 245 | 7.79e-14 | 67.8 |
| Msa0221720 | AT2G47470.4 | 36.538 | 104 | 64 | 2 | 44 | 146 | 28 | 130 | 3.28e-17 | 77.4 |
| Msa0221720 | AT2G47470.4 | 30.000 | 110 | 74 | 2 | 34 | 142 | 138 | 245 | 8.87e-14 | 67.8 |
| Msa0221720 | AT2G47470.1 | 36.538 | 104 | 64 | 2 | 44 | 146 | 28 | 130 | 3.32e-17 | 77.8 |
| Msa0221720 | AT2G47470.1 | 30.000 | 110 | 74 | 2 | 34 | 142 | 138 | 245 | 8.89e-14 | 68.2 |
| Msa0221720 | AT2G47470.2 | 36.538 | 104 | 64 | 2 | 44 | 146 | 28 | 130 | 3.82e-17 | 76.3 |
| Msa0221720 | AT2G47470.2 | 30.000 | 110 | 74 | 2 | 34 | 142 | 138 | 245 | 1.10e-13 | 67.0 |
| Msa0221720 | AT1G04980.1 | 30.252 | 119 | 78 | 3 | 39 | 155 | 167 | 282 | 1.40e-15 | 73.2 |
| Msa0221720 | AT1G04980.1 | 28.369 | 141 | 93 | 3 | 22 | 157 | 10 | 147 | 3.28e-15 | 72.4 |
| Msa0221720 | AT2G32920.1 | 27.119 | 118 | 83 | 2 | 39 | 155 | 162 | 277 | 7.48e-15 | 71.2 |
| Msa0221720 | AT2G32920.1 | 29.358 | 109 | 75 | 1 | 37 | 145 | 28 | 134 | 7.04e-14 | 68.6 |
| Msa0221720 | AT1G21750.2 | 25.874 | 143 | 101 | 4 | 20 | 158 | 11 | 152 | 3.77e-12 | 63.5 |
| Msa0221720 | AT1G21750.1 | 25.874 | 143 | 101 | 4 | 20 | 158 | 11 | 152 | 5.73e-12 | 63.2 |
Find 57 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTCATATCCTACCTTTA+AGG | 0.131222 | 2_1:+70463113 | Msa0221720:CDS |
| AGAATTGATCTTTACAAATT+TGG | 0.154034 | 2_1:-70467733 | None:intergenic |
| CTTTCATTCAAACTCTTTAT+TGG | 0.193530 | 2_1:+70468033 | Msa0221720:three_prime_UTR |
| CTTGTTTGACAGCAAGAATT+TGG | 0.197840 | 2_1:+70462984 | Msa0221720:intron |
| AGTATCTATTTAATGATTAA+TGG | 0.200561 | 2_1:-70467976 | None:intergenic |
| AGGATGGTTACCTTGATATT+TGG | 0.225762 | 2_1:-70463160 | None:intergenic |
| TGCAGAATTAGTTCTAAATT+AGG | 0.276892 | 2_1:-70467793 | None:intergenic |
| AATGAAAATGAAATAGAAAT+TGG | 0.279747 | 2_1:+70463042 | Msa0221720:CDS |
| CTTTATTGGTTTAAAATTGT+TGG | 0.295886 | 2_1:+70468047 | Msa0221720:three_prime_UTR |
| TCCATCATAGAAGACCTTAA+AGG | 0.304066 | 2_1:-70463127 | None:intergenic |
| AAATAACGAACGAACCTTAT+CGG | 0.326500 | 2_1:-70462592 | None:intergenic |
| CCAAGACTTCCACTCGCTTC+AGG | 0.351197 | 2_1:+70467292 | Msa0221720:three_prime_UTR |
| TGTTTGCTTCACCACTCCAC+TGG | 0.378455 | 2_1:-70462303 | None:intergenic |
| TTGTTTGACAGCAAGAATTT+GGG | 0.404187 | 2_1:+70462985 | Msa0221720:intron |
| ACCTTTAAGGTCTTCTATGA+TGG | 0.409757 | 2_1:+70463126 | Msa0221720:CDS |
| TAAAGTGATGACTTCGGAAT+TGG | 0.410443 | 2_1:-70462553 | None:intergenic |
| CAAGAATTTGGGCTCATTGT+GGG | 0.434268 | 2_1:+70462996 | Msa0221720:CDS |
| GGGCTCATTGTGGGATGATG+TGG | 0.444499 | 2_1:+70463005 | Msa0221720:CDS |
| GTAAGAGCTGGTTGTCGTCT+AGG | 0.466606 | 2_1:-70467693 | None:intergenic |
| CTCCGACACCTTCTCCGATA+AGG | 0.470925 | 2_1:+70462578 | Msa0221720:CDS |
| TGGTGAAATGGTCAGGTACA+AGG | 0.482183 | 2_1:+70467163 | Msa0221720:intron |
| AGTGATGACTTCGGAATTGG+TGG | 0.488143 | 2_1:-70462550 | None:intergenic |
| GGCTCATTGTGGGATGATGT+GGG | 0.504705 | 2_1:+70463006 | Msa0221720:CDS |
| GAAGAAGTTGCCAAATATCA+AGG | 0.505213 | 2_1:+70463150 | Msa0221720:CDS |
| TTGTCAAATTCTGTGTTCCA+TGG | 0.511655 | 2_1:+70462722 | Msa0221720:CDS |
| ATGGCGTACTGTTCACATTG+AGG | 0.512823 | 2_1:+70467849 | Msa0221720:intron |
| GGATGATGTGGGTAAGGCAA+TGG | 0.519804 | 2_1:+70463017 | Msa0221720:CDS |
| TAGACGACAACCAGCTCTTA+CGG | 0.524103 | 2_1:+70467695 | Msa0221720:three_prime_UTR |
| GTTTGCTTCACCACTCCACT+GGG | 0.537964 | 2_1:-70462302 | None:intergenic |
| CCTGAAGCGAGTGGAAGTCT+TGG | 0.541331 | 2_1:-70467292 | None:intergenic |
| GCACTGCCTGCCGTAAGAGC+TGG | 0.545330 | 2_1:-70467705 | None:intergenic |
| TGAAGATGATTGATATTCGC+CGG | 0.552575 | 2_1:-70462472 | None:intergenic |
| CGACAACCAGCTCTTACGGC+AGG | 0.552585 | 2_1:+70467699 | Msa0221720:three_prime_UTR |
| GCAAGAATTTGGGCTCATTG+TGG | 0.559422 | 2_1:+70462995 | Msa0221720:intron |
| GTGGAGTGGTGAAGCAAACA+AGG | 0.574025 | 2_1:+70462306 | Msa0221720:five_prime_UTR |
| AAATAGATACTCATAAAGCT+AGG | 0.577802 | 2_1:+70467988 | Msa0221720:three_prime_UTR |
| ATGTTTAGGAATCATGCTTG+AGG | 0.578432 | 2_1:+70467879 | Msa0221720:three_prime_UTR |
| AACCTTATCGGAGAAGGTGT+CGG | 0.578717 | 2_1:-70462580 | None:intergenic |
| ATTGTGGGATGATGTGGGTA+AGG | 0.579011 | 2_1:+70463011 | Msa0221720:CDS |
| CGAACGAACCTTATCGGAGA+AGG | 0.614375 | 2_1:-70462586 | None:intergenic |
| ATCGATAGATCATGAGAACT+CGG | 0.617492 | 2_1:+70462433 | Msa0221720:exon |
| AATTACCAATGTTTGCACCA+TGG | 0.617921 | 2_1:-70462739 | None:intergenic |
| CTAAAATTTACCCAGTGGAG+TGG | 0.619062 | 2_1:+70462292 | None:intergenic |
| GTGTTCCATGGTGCAAACAT+TGG | 0.622182 | 2_1:+70462734 | Msa0221720:CDS |
| TAAAGGAGAAAGATACTGCA+TGG | 0.624434 | 2_1:+70462698 | Msa0221720:CDS |
| GAAATTGGAGAAGTTGATTG+CGG | 0.626312 | 2_1:+70463057 | Msa0221720:CDS |
| AAGAATGAACCTGAAGCGAG+TGG | 0.630461 | 2_1:-70467301 | None:intergenic |
| TCATAGAAGACCTTAAAGGT+AGG | 0.632328 | 2_1:-70463123 | None:intergenic |
| TGAAGCAAACAAGGCACGAG+AGG | 0.634885 | 2_1:+70462315 | Msa0221720:five_prime_UTR |
| GGTGAAATGGTCAGGTACAA+GGG | 0.636682 | 2_1:+70467164 | Msa0221720:intron |
| TGGAGAAGTTGATTGCGGCA+CGG | 0.643872 | 2_1:+70463062 | Msa0221720:CDS |
| CGGCGCACGCAATCTCACTC+CGG | 0.649117 | 2_1:+70462453 | Msa0221720:CDS |
| GGAGGTTAAAGTGATGACTT+CGG | 0.650064 | 2_1:-70462559 | None:intergenic |
| GAAGCAAACAAGGCACGAGA+GGG | 0.654959 | 2_1:+70462316 | Msa0221720:five_prime_UTR |
| CTTATCGGAGAAGGTGTCGG+AGG | 0.666072 | 2_1:-70462577 | None:intergenic |
| GTGATGACTTCGGAATTGGT+GGG | 0.668238 | 2_1:-70462549 | None:intergenic |
| CATAAAATGATCTCACACGT+AGG | 0.707641 | 2_1:-70467953 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAGTAAATAAATAAAATT+GGG | - | chr2_1:70462640-70462659 | None:intergenic | 10.0% |
| !!! | AAAGTATTTTAAAAAGTAAA+AGG | + | chr2_1:70464821-70464840 | Msa0221720:intron | 10.0% |
| !!! | AAGTATTTTAAAAAGTAAAA+GGG | + | chr2_1:70464822-70464841 | Msa0221720:intron | 10.0% |
| !! | AAATCATATAATTTCAAATA+TGG | - | chr2_1:70467604-70467623 | None:intergenic | 10.0% |
| !! | GAGAAGTAAATAAATAAAAT+TGG | - | chr2_1:70462641-70462660 | None:intergenic | 15.0% |
| !! | AATGAAAATGAAATAGAAAT+TGG | + | chr2_1:70463042-70463061 | Msa0221720:CDS | 15.0% |
| !! | AATAAAGTCAAATTAATACA+GGG | - | chr2_1:70463226-70463245 | None:intergenic | 15.0% |
| !!! | TAACCTTTTTTTTTATTTTC+CGG | + | chr2_1:70463272-70463291 | Msa0221720:intron | 15.0% |
| !!! | ATAAAAGACAATTATTTTGT+GGG | - | chr2_1:70463435-70463454 | None:intergenic | 15.0% |
| !!! | AATAAAAGACAATTATTTTG+TGG | - | chr2_1:70463436-70463455 | None:intergenic | 15.0% |
| !! | AAAATATCAATGGTAAAAAT+AGG | + | chr2_1:70464319-70464338 | Msa0221720:intron | 15.0% |
| !! | ATTATATATATATTCTTCTC+AGG | + | chr2_1:70464484-70464503 | Msa0221720:intron | 15.0% |
| !!! | TTAAAATGAACACATTTTTT+AGG | - | chr2_1:70464599-70464618 | None:intergenic | 15.0% |
| !!! | ACATTATTTTATATCAAGTT+TGG | + | chr2_1:70466626-70466645 | Msa0221720:intron | 15.0% |
| !! | GAATTTCTCTATAAAATTAA+CGG | - | chr2_1:70467030-70467049 | None:intergenic | 15.0% |
| !!! | AATTTTATAGAGAAATTCAA+TGG | + | chr2_1:70467032-70467051 | Msa0221720:intron | 15.0% |
| !! | GTATAACAACATAAAATTTA+TGG | + | chr2_1:70467830-70467849 | Msa0221720:intron | 15.0% |
| !! | AGTATCTATTTAATGATTAA+TGG | - | chr2_1:70467979-70467998 | None:intergenic | 15.0% |
| !!! | AAAATTGTTGGAATTTTTTT+TGG | + | chr2_1:70468059-70468078 | Msa0221720:three_prime_UTR | 15.0% |
| !! | TTCATTTCATTTGTAGATAA+AGG | + | chr2_1:70462681-70462700 | Msa0221720:intron | 20.0% |
| !!! | TTTATAAGTGATTTTAGAAG+TGG | + | chr2_1:70462866-70462885 | Msa0221720:intron | 20.0% |
| !! | ACAAAATATATGGTTTCTAT+TGG | + | chr2_1:70463186-70463205 | Msa0221720:intron | 20.0% |
| !! | GAATAAAGTCAAATTAATAC+AGG | - | chr2_1:70463227-70463246 | None:intergenic | 20.0% |
| !! | ATTCCGGAAAATAAAAAAAA+AGG | - | chr2_1:70463278-70463297 | None:intergenic | 20.0% |
| !! | ATATAGATACTAACATATTC+CGG | - | chr2_1:70463294-70463313 | None:intergenic | 20.0% |
| !! | TTGAAAATTAGTAAGCAAAT+AGG | - | chr2_1:70463805-70463824 | None:intergenic | 20.0% |
| !! | ATCGAATATAAAGTGATAAT+AGG | + | chr2_1:70463909-70463928 | Msa0221720:intron | 20.0% |
| !!! | ATTCTATTCTTGTTTCTTTT+TGG | - | chr2_1:70464248-70464267 | None:intergenic | 20.0% |
| !!! | TTTTTACCATTGATATTTTG+AGG | - | chr2_1:70464318-70464337 | None:intergenic | 20.0% |
| !! | ATATTTCTTACCAAAAAAAG+TGG | + | chr2_1:70464522-70464541 | Msa0221720:intron | 20.0% |
| !! | TATTTCTTACCAAAAAAAGT+GGG | + | chr2_1:70464523-70464542 | Msa0221720:intron | 20.0% |
| !!! | AATAATGAAAACAACTCTTT+TGG | + | chr2_1:70464705-70464724 | Msa0221720:intron | 20.0% |
| !! | AATGAATAATATCTACAACA+AGG | + | chr2_1:70464894-70464913 | Msa0221720:intron | 20.0% |
| !! | TATTATTAGATACTAAACGA+GGG | - | chr2_1:70465300-70465319 | None:intergenic | 20.0% |
| !!! | TATTGAAAGTATGAACAATA+TGG | + | chr2_1:70465724-70465743 | Msa0221720:intron | 20.0% |
| !! | AAAGAATAATATCTACAACA+AGG | - | chr2_1:70466452-70466471 | None:intergenic | 20.0% |
| !!! | AAGAAATTAGGTTTCTTTTT+TGG | - | chr2_1:70466504-70466523 | None:intergenic | 20.0% |
| !! | AAAGTAGAACAAAAAGAAAA+TGG | - | chr2_1:70467420-70467439 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTGTTCTACTTT+TGG | + | chr2_1:70467420-70467439 | Msa0221720:intron | 20.0% |
| !!! | TGTGAACAAATTTTCAATTT+TGG | + | chr2_1:70467493-70467512 | Msa0221720:intron | 20.0% |
| !!! | TATTAACCACTTCTTAATTT+TGG | + | chr2_1:70467549-70467568 | Msa0221720:intron | 20.0% |
| !! | TCATATAATTTCAAATATGG+TGG | - | chr2_1:70467601-70467620 | None:intergenic | 20.0% |
| !! | TTATTGGATGACAAATTATA+GGG | - | chr2_1:70467628-70467647 | None:intergenic | 20.0% |
| !! | TTTATTGGATGACAAATTAT+AGG | - | chr2_1:70467629-70467648 | None:intergenic | 20.0% |
| !! | AGAATTGATCTTTACAAATT+TGG | - | chr2_1:70467736-70467755 | None:intergenic | 20.0% |
| !! | TTATGTTGTTATACCAAAAA+TGG | - | chr2_1:70467824-70467843 | None:intergenic | 20.0% |
| !!! | ATTGAGGTTTTTAAATGTTT+AGG | + | chr2_1:70467865-70467884 | Msa0221720:three_prime_UTR | 20.0% |
| !!! | CTTTATTGGTTTAAAATTGT+TGG | + | chr2_1:70468047-70468066 | Msa0221720:three_prime_UTR | 20.0% |
| !!! | CATATAAGTGATTTTAGAAG+TGG | + | chr2_1:70462799-70462818 | Msa0221720:intron | 25.0% |
| !!! | TGAGATTTTAGAAGTGATTA+AGG | + | chr2_1:70462825-70462844 | Msa0221720:intron | 25.0% |
| !! | GAAACCATATATTTTGTAGA+AGG | - | chr2_1:70463183-70463202 | None:intergenic | 25.0% |
| ! | TATATGTTAGTGTTATGTTG+TGG | + | chr2_1:70463309-70463328 | Msa0221720:intron | 25.0% |
| !! | TATAACCATTTATGACTTGT+TGG | + | chr2_1:70463385-70463404 | Msa0221720:intron | 25.0% |
| !!! | ACAATTATTTTGTGGGATAT+AGG | - | chr2_1:70463428-70463447 | None:intergenic | 25.0% |
| ! | TTAAGTTTATCAAGTGTCAT+AGG | + | chr2_1:70463506-70463525 | Msa0221720:intron | 25.0% |
| !!! | AAGTGTCATAGGTTTTATAA+GGG | + | chr2_1:70463517-70463536 | Msa0221720:intron | 25.0% |
| !! | TCTTGGAATTCTTTTATGAT+AGG | + | chr2_1:70464290-70464309 | Msa0221720:intron | 25.0% |
| ! | CAGAAAAATGTTCAGAAAAA+AGG | + | chr2_1:70464409-70464428 | Msa0221720:intron | 25.0% |
| ! | AAATGTTCAGAAAAAAGGAA+AGG | + | chr2_1:70464414-70464433 | Msa0221720:intron | 25.0% |
| !!! | TATATATAATTTGCTAACCG+TGG | - | chr2_1:70464474-70464493 | None:intergenic | 25.0% |
| !! | AAGTTTTCACAACATAAATG+AGG | - | chr2_1:70464563-70464582 | None:intergenic | 25.0% |
| ! | AACTCCAAAAAAGAAACATA+AGG | - | chr2_1:70464849-70464868 | None:intergenic | 25.0% |
| ! | ATTATTAGATACTAAACGAG+GGG | - | chr2_1:70465299-70465318 | None:intergenic | 25.0% |
| ! | GTATTATTAGATACTAAACG+AGG | - | chr2_1:70465301-70465320 | None:intergenic | 25.0% |
| ! | CAGATAATAATCTTCTTTCT+CGG | + | chr2_1:70465634-70465653 | Msa0221720:intron | 25.0% |
| !!! | ACTGTCTTTACGATTTTTTA+TGG | + | chr2_1:70465825-70465844 | Msa0221720:intron | 25.0% |
| !!! | CTGTCTTTACGATTTTTTAT+GGG | + | chr2_1:70465826-70465845 | Msa0221720:intron | 25.0% |
| ! | TGCATATTATTAGATACTCA+AGG | + | chr2_1:70466082-70466101 | Msa0221720:intron | 25.0% |
| ! | ATAAAATAATGTGAAGCCAA+GGG | - | chr2_1:70466618-70466637 | None:intergenic | 25.0% |
| ! | TATAAAATAATGTGAAGCCA+AGG | - | chr2_1:70466619-70466638 | None:intergenic | 25.0% |
| !! | TGTTATTTAACACAAGTGAT+AGG | - | chr2_1:70466768-70466787 | None:intergenic | 25.0% |
| ! | AATCATAAAAAGCTGCTATT+GGG | - | chr2_1:70466964-70466983 | None:intergenic | 25.0% |
| ! | AAATCATAAAAAGCTGCTAT+TGG | - | chr2_1:70466965-70466984 | None:intergenic | 25.0% |
| ! | GATTAACAACAAATATGTCA+TGG | - | chr2_1:70467079-70467098 | None:intergenic | 25.0% |
| ! | CCACAAACAAAAATAAGATT+TGG | - | chr2_1:70467146-70467165 | None:intergenic | 25.0% |
| !!! | CCAAATCTTATTTTTGTTTG+TGG | + | chr2_1:70467143-70467162 | Msa0221720:intron | 25.0% |
| !!! | TATTTTTGTTTGTGGTGAAA+TGG | + | chr2_1:70467151-70467170 | Msa0221720:intron | 25.0% |
| !!! | ATCATTGAAAGCTTTTGTTT+TGG | + | chr2_1:70467194-70467213 | Msa0221720:CDS | 25.0% |
| !! | AAGAATTATAACGAGTTTTG+AGG | + | chr2_1:70467262-70467281 | Msa0221720:exon | 25.0% |
| !!! | TCTACTTTTGGTATTTGTAA+TGG | + | chr2_1:70467432-70467451 | Msa0221720:intron | 25.0% |
| !!! | CTACTTTTGGTATTTGTAAT+GGG | + | chr2_1:70467433-70467452 | Msa0221720:intron | 25.0% |
| ! | GATTAACCAAAATTAAGAAG+TGG | - | chr2_1:70467558-70467577 | None:intergenic | 25.0% |
| ! | AAATGATTGCAGTGATTTAT+TGG | - | chr2_1:70467644-70467663 | None:intergenic | 25.0% |
| !!! | TGCAGAATTAGTTCTAAATT+AGG | - | chr2_1:70467796-70467815 | None:intergenic | 25.0% |
| ! | AAATAGATACTCATAAAGCT+AGG | + | chr2_1:70467988-70468007 | Msa0221720:three_prime_UTR | 25.0% |
| ! | CTTTCATTCAAACTCTTTAT+TGG | + | chr2_1:70468033-70468052 | Msa0221720:three_prime_UTR | 25.0% |
| GAATTGAAAAAGAGAGAAGA+AGG | - | chr2_1:70462530-70462549 | None:intergenic | 30.0% | |
| AAATAACGAACGAACCTTAT+CGG | - | chr2_1:70462595-70462614 | None:intergenic | 30.0% | |
| ATAAGGTTCGTTCGTTATTT+AGG | + | chr2_1:70462595-70462614 | Msa0221720:intron | 30.0% | |
| TAAGGTTCGTTCGTTATTTA+GGG | + | chr2_1:70462596-70462615 | Msa0221720:intron | 30.0% | |
| TTAAGGTTCGTTCGTTATTT+AGG | + | chr2_1:70462842-70462861 | Msa0221720:intron | 30.0% | |
| TAAGGTTCGTTCGTTATTTA+GGG | + | chr2_1:70462596-70462615 | Msa0221720:intron | 30.0% | |
| TTGTTTGACAGCAAGAATTT+GGG | + | chr2_1:70462985-70463004 | Msa0221720:intron | 30.0% | |
| TCATTCATATCCTACCTTTA+AGG | + | chr2_1:70463113-70463132 | Msa0221720:CDS | 30.0% | |
| ! | CCATATATTTTGTAGAAGGA+TGG | - | chr2_1:70463179-70463198 | None:intergenic | 30.0% |
| CCATCCTTCTACAAAATATA+TGG | + | chr2_1:70463176-70463195 | Msa0221720:intron | 30.0% | |
| AAAGTTACCTGAAAGATTGA+GGG | - | chr2_1:70463356-70463375 | None:intergenic | 30.0% | |
| ! | ATCTTTCAGGTAACTTTGAA+TGG | + | chr2_1:70463359-70463378 | Msa0221720:intron | 30.0% |
| TTAGTCCAACAAGTCATAAA+TGG | - | chr2_1:70463393-70463412 | None:intergenic | 30.0% | |
| !! | CAAGTGTCATAGGTTTTATA+AGG | + | chr2_1:70463516-70463535 | Msa0221720:intron | 30.0% |
| !! | AGTGTCATAGGTTTTATAAG+GGG | + | chr2_1:70463518-70463537 | Msa0221720:intron | 30.0% |
| AAAATTCAGTACCCAATTCT+TGG | - | chr2_1:70463549-70463568 | None:intergenic | 30.0% | |
| TTGATGTTTGCTTTATCCAT+GGG | + | chr2_1:70463579-70463598 | Msa0221720:intron | 30.0% | |
| !! | ACCTTTAATATGAAGTGTTG+AGG | + | chr2_1:70463740-70463759 | Msa0221720:intron | 30.0% |
| AACCAAACAGAATGAAAACA+AGG | + | chr2_1:70463879-70463898 | Msa0221720:intron | 30.0% | |
| !! | CATTTCTGGAGTAGAAAATT+GGG | + | chr2_1:70463986-70464005 | Msa0221720:intron | 30.0% |
| !! | GTTTAGTTCACTTGTTTTCA+TGG | + | chr2_1:70464026-70464045 | Msa0221720:intron | 30.0% |
| TAGGTACCTCAAAATATCAA+TGG | + | chr2_1:70464309-70464328 | Msa0221720:intron | 30.0% | |
| AAGTTCAGGTCTATTTATCA+TGG | + | chr2_1:70464363-70464382 | Msa0221720:intron | 30.0% | |
| ATGGATAGTAATTTGACTCT+TGG | + | chr2_1:70464382-70464401 | Msa0221720:intron | 30.0% | |
| ! | AAGAAACATAATTTGCCTGT+AGG | - | chr2_1:70464440-70464459 | None:intergenic | 30.0% |
| TTTCTTTCCAAAAAGAACCA+CGG | + | chr2_1:70464454-70464473 | Msa0221720:intron | 30.0% | |
| !!! | TTTGCTAATCCCACTTTTTT+TGG | - | chr2_1:70464535-70464554 | None:intergenic | 30.0% |
| ! | AAAAGTGGGATTAGCAAATT+AGG | + | chr2_1:70464537-70464556 | Msa0221720:intron | 30.0% |
| TAACATTCTTTCCATCACAA+TGG | - | chr2_1:70464655-70464674 | None:intergenic | 30.0% | |
| AAGAATGTTAAATGCTAGCT+AGG | + | chr2_1:70464665-70464684 | Msa0221720:intron | 30.0% | |
| AGAATGTTAAATGCTAGCTA+GGG | + | chr2_1:70464666-70464685 | Msa0221720:intron | 30.0% | |
| TAGCCTTTGATTGTGTATTT+GGG | - | chr2_1:70465036-70465055 | None:intergenic | 30.0% | |
| ATAGCCTTTGATTGTGTATT+TGG | - | chr2_1:70465037-70465056 | None:intergenic | 30.0% | |
| CAAGTGAAACTTACAAATGT+TGG | - | chr2_1:70465079-70465098 | None:intergenic | 30.0% | |
| TGTCTCTTATTGATCTAGAT+AGG | + | chr2_1:70465140-70465159 | Msa0221720:intron | 30.0% | |
| TAGGAAGACAAGATGTATAT+GGG | - | chr2_1:70465195-70465214 | None:intergenic | 30.0% | |
| AGTATCTAATAATACGCAAC+TGG | + | chr2_1:70465306-70465325 | Msa0221720:intron | 30.0% | |
| GTATCTAATAATACGCAACT+GGG | + | chr2_1:70465307-70465326 | Msa0221720:intron | 30.0% | |
| ATCAGCTTCTATTTATGCAA+AGG | - | chr2_1:70465539-70465558 | None:intergenic | 30.0% | |
| AAGACAGTAAACGTAATTGA+AGG | + | chr2_1:70465578-70465597 | Msa0221720:intron | 30.0% | |
| AACAAGATCTACATTTGTTC+TGG | + | chr2_1:70466023-70466042 | Msa0221720:intron | 30.0% | |
| ! | TTATAGCCTTTGATGGTAAT+TGG | + | chr2_1:70466308-70466327 | Msa0221720:intron | 30.0% |
| ! | TATAGCCTTTGATGGTAATT+GGG | + | chr2_1:70466309-70466328 | Msa0221720:intron | 30.0% |
| ! | GGATGCTTTATTCAATGATA+TGG | + | chr2_1:70466330-70466349 | Msa0221720:intron | 30.0% |
| AATAATATCTACAACAAGGC+AGG | - | chr2_1:70464898-70464917 | None:intergenic | 30.0% | |
| !!! | TTAGGTTTCTTTTTTGGAGT+TGG | - | chr2_1:70466498-70466517 | None:intergenic | 30.0% |
| AGAAACACGGTTAAGAAATT+AGG | - | chr2_1:70466516-70466535 | None:intergenic | 30.0% | |
| ! | TTCTTAACCGTGTTTCTTTT+TGG | + | chr2_1:70466519-70466538 | Msa0221720:intron | 30.0% |
| CATTCTTCCAAAAAGAAACA+CGG | - | chr2_1:70466529-70466548 | None:intergenic | 30.0% | |
| ! | GGAGTATATTTGTTACTACA+AGG | - | chr2_1:70467009-70467028 | None:intergenic | 30.0% |
| AAGTTACAAACGTGCAATTT+AGG | + | chr2_1:70467457-70467476 | Msa0221720:intron | 30.0% | |
| ! | CTCAAGATGTTGTATTTTGT+GGG | + | chr2_1:70467929-70467948 | Msa0221720:three_prime_UTR | 30.0% |
| !! | GATCTAGAGCGTAAATTTTG+CGG | + | chr2_1:70462378-70462397 | Msa0221720:five_prime_UTR | 35.0% |
| ATCGATAGATCATGAGAACT+CGG | + | chr2_1:70462433-70462452 | Msa0221720:exon | 35.0% | |
| TGAAGATGATTGATATTCGC+CGG | - | chr2_1:70462475-70462494 | None:intergenic | 35.0% | |
| TAAAGTGATGACTTCGGAAT+TGG | - | chr2_1:70462556-70462575 | None:intergenic | 35.0% | |
| TAAAGGAGAAAGATACTGCA+TGG | + | chr2_1:70462698-70462717 | Msa0221720:CDS | 35.0% | |
| TTGTCAAATTCTGTGTTCCA+TGG | + | chr2_1:70462722-70462741 | Msa0221720:CDS | 35.0% | |
| AATTACCAATGTTTGCACCA+TGG | - | chr2_1:70462742-70462761 | None:intergenic | 35.0% | |
| CTTGTTTGACAGCAAGAATT+TGG | + | chr2_1:70462984-70463003 | Msa0221720:intron | 35.0% | |
| ! | GAAATTGGAGAAGTTGATTG+CGG | + | chr2_1:70463057-70463076 | Msa0221720:CDS | 35.0% |
| TCATAGAAGACCTTAAAGGT+AGG | - | chr2_1:70463126-70463145 | None:intergenic | 35.0% | |
| !! | ACCTTTAAGGTCTTCTATGA+TGG | + | chr2_1:70463126-70463145 | Msa0221720:CDS | 35.0% |
| TCCATCATAGAAGACCTTAA+AGG | - | chr2_1:70463130-70463149 | None:intergenic | 35.0% | |
| GAAGAAGTTGCCAAATATCA+AGG | + | chr2_1:70463150-70463169 | Msa0221720:CDS | 35.0% | |
| AGGATGGTTACCTTGATATT+TGG | - | chr2_1:70463163-70463182 | None:intergenic | 35.0% | |
| CAAAGTTACCTGAAAGATTG+AGG | - | chr2_1:70463357-70463376 | None:intergenic | 35.0% | |
| TAAGGGGAATATCCAAGAAT+TGG | + | chr2_1:70463534-70463553 | Msa0221720:intron | 35.0% | |
| AAGGGGAATATCCAAGAATT+GGG | + | chr2_1:70463535-70463554 | Msa0221720:intron | 35.0% | |
| GTTGATGTTTGCTTTATCCA+TGG | + | chr2_1:70463578-70463597 | Msa0221720:intron | 35.0% | |
| GCCTCAACACTTCATATTAA+AGG | - | chr2_1:70463744-70463763 | None:intergenic | 35.0% | |
| ATTACAACTTGCCTCACATT+AGG | + | chr2_1:70463771-70463790 | Msa0221720:intron | 35.0% | |
| !!! | CACCTTGTTTTCATTCTGTT+TGG | - | chr2_1:70463884-70463903 | None:intergenic | 35.0% |
| CAAACAGAATGAAAACAAGG+TGG | + | chr2_1:70463882-70463901 | Msa0221720:intron | 35.0% | |
| ! | CCAATTTTCTACTCCAGAAA+TGG | - | chr2_1:70463988-70464007 | None:intergenic | 35.0% |
| !! | CCATTTCTGGAGTAGAAAAT+TGG | + | chr2_1:70463985-70464004 | Msa0221720:intron | 35.0% |
| TGATAACAACAGTGATACAG+TGG | - | chr2_1:70464109-70464128 | None:intergenic | 35.0% | |
| ATATGTCCTAGAACTTCTCT+TGG | + | chr2_1:70464273-70464292 | Msa0221720:intron | 35.0% | |
| AGAATTCCAAGAGAAGTTCT+AGG | - | chr2_1:70464282-70464301 | None:intergenic | 35.0% | |
| ! | CTGTATGTTGATGAAAGTTC+AGG | + | chr2_1:70464349-70464368 | Msa0221720:intron | 35.0% |
| !!! | GGGACCTTATGTTTCTTTTT+TGG | + | chr2_1:70464842-70464861 | Msa0221720:intron | 35.0% |
| GGATGCTTTATCCAATGATA+TGG | - | chr2_1:70465015-70465034 | None:intergenic | 35.0% | |
| CATCCCAAATACACAATCAA+AGG | + | chr2_1:70465030-70465049 | Msa0221720:intron | 35.0% | |
| GTGAAACTTACAAATGTTGG+AGG | - | chr2_1:70465076-70465095 | None:intergenic | 35.0% | |
| AGTTTCACTTGCTTAACATG+CGG | + | chr2_1:70465088-70465107 | Msa0221720:intron | 35.0% | |
| GTAGGAAGACAAGATGTATA+TGG | - | chr2_1:70465196-70465215 | None:intergenic | 35.0% | |
| AAGATAATGTAGAAGAGAGG+GGG | - | chr2_1:70465243-70465262 | None:intergenic | 35.0% | |
| GAAGATAATGTAGAAGAGAG+GGG | - | chr2_1:70465244-70465263 | None:intergenic | 35.0% | |
| GGAAGATAATGTAGAAGAGA+GGG | - | chr2_1:70465245-70465264 | None:intergenic | 35.0% | |
| TGGAAGATAATGTAGAAGAG+AGG | - | chr2_1:70465246-70465265 | None:intergenic | 35.0% | |
| !! | GATTTGTTTTCGTTGATGGA+CGG | - | chr2_1:70465360-70465379 | None:intergenic | 35.0% |
| !! | GCTAGATTTGTTTTCGTTGA+TGG | - | chr2_1:70465364-70465383 | None:intergenic | 35.0% |
| ! | ACTGTCTTCGCAATTTTTGT+CGG | - | chr2_1:70465566-70465585 | None:intergenic | 35.0% |
| GATCAAAACAGATTGCCATA+GGG | - | chr2_1:70465615-70465634 | None:intergenic | 35.0% | |
| TGATCAAAACAGATTGCCAT+AGG | - | chr2_1:70465616-70465635 | None:intergenic | 35.0% | |
| TTTGTGAAGTATGAACAAGC+TGG | - | chr2_1:70465665-70465684 | None:intergenic | 35.0% | |
| GCTTGTTCATACTTCACAAA+AGG | + | chr2_1:70465665-70465684 | Msa0221720:intron | 35.0% | |
| AATATGGCTTGACCAAGAAA+GGG | + | chr2_1:70465740-70465759 | Msa0221720:intron | 35.0% | |
| GATAGTAATCTTCCCTTTCT+TGG | - | chr2_1:70465755-70465774 | None:intergenic | 35.0% | |
| TAATCAAAACAGATTGCCTC+AGG | + | chr2_1:70465775-70465794 | Msa0221720:intron | 35.0% | |
| AATCAAAACAGATTGCCTCA+GGG | + | chr2_1:70465776-70465795 | Msa0221720:intron | 35.0% | |
| !! | TAGGAAGACTTGGTGTATTT+GGG | + | chr2_1:70466190-70466209 | Msa0221720:intron | 35.0% |
| CTATGCCTATCTAGATCAAT+AGG | + | chr2_1:70466229-70466248 | Msa0221720:intron | 35.0% | |
| CAAGTGAAACTTTCAAATGC+TGG | + | chr2_1:70466285-70466304 | Msa0221720:intron | 35.0% | |
| ! | TTCTCACTCTGGAAATGATA+AGG | + | chr2_1:70466577-70466596 | Msa0221720:intron | 35.0% |
| ! | TCTCACTCTGGAAATGATAA+GGG | + | chr2_1:70466578-70466597 | Msa0221720:intron | 35.0% |
| TGATAAGGGCTTAGTTACTA+TGG | + | chr2_1:70466592-70466611 | Msa0221720:intron | 35.0% | |
| ! | TGATGAATGAAGGTGCAATA+TGG | + | chr2_1:70466740-70466759 | Msa0221720:intron | 35.0% |
| AATGTACTTACCAGATCTTG+TGG | + | chr2_1:70466790-70466809 | Msa0221720:intron | 35.0% | |
| TCACAGGCATACAATTACAT+AGG | - | chr2_1:70466816-70466835 | None:intergenic | 35.0% | |
| ATTGTATGCCTGTGAGTTTA+TGG | + | chr2_1:70466821-70466840 | Msa0221720:intron | 35.0% | |
| TTAGTATGCCATAAACTCAC+AGG | - | chr2_1:70466832-70466851 | None:intergenic | 35.0% | |
| !! | TGTTTTGGATGAAGCTGAAA+AGG | + | chr2_1:70467209-70467228 | Msa0221720:CDS | 35.0% |
| !!! | TTCTGTTTTTGTTCTCTCCA+TGG | + | chr2_1:70467322-70467341 | Msa0221720:intron | 35.0% |
| TGACTGAATTAACCACTCTT+TGG | - | chr2_1:70467526-70467545 | None:intergenic | 35.0% | |
| ! | ATTCTGCACACTACCATTTT+TGG | + | chr2_1:70467808-70467827 | Msa0221720:three_prime_UTR | 35.0% |
| ATGTTTAGGAATCATGCTTG+AGG | + | chr2_1:70467879-70467898 | Msa0221720:three_prime_UTR | 35.0% | |
| ! | GCTCAAGATGTTGTATTTTG+TGG | + | chr2_1:70467928-70467947 | Msa0221720:three_prime_UTR | 35.0% |
| CATAAAATGATCTCACACGT+AGG | - | chr2_1:70467956-70467975 | None:intergenic | 35.0% | |
| GGAGGTTAAAGTGATGACTT+CGG | - | chr2_1:70462562-70462581 | None:intergenic | 40.0% | |
| CAAGAATTTGGGCTCATTGT+GGG | + | chr2_1:70462996-70463015 | Msa0221720:CDS | 40.0% | |
| AGTGTTATGTTGTGGACTTG+TGG | + | chr2_1:70463317-70463336 | Msa0221720:intron | 40.0% | |
| GATAGAACCCTCAATCTTTC+AGG | + | chr2_1:70463346-70463365 | Msa0221720:intron | 40.0% | |
| GCTTCATAGGTTATATCCCA+TGG | - | chr2_1:70463598-70463617 | None:intergenic | 40.0% | |
| GTTAGTGTTAGTGTCGTGTT+TGG | - | chr2_1:70463640-70463659 | None:intergenic | 40.0% | |
| ! | TCTACTCCAGAAATGGACTT+AGG | - | chr2_1:70463981-70464000 | None:intergenic | 40.0% |
| TGATAGTTGTAGTGTTGTGG+TGG | - | chr2_1:70464074-70464093 | None:intergenic | 40.0% | |
| AGGTGATAGTTGTAGTGTTG+TGG | - | chr2_1:70464077-70464096 | None:intergenic | 40.0% | |
| TAAAGATACTCCAGCAGTAG+TGG | - | chr2_1:70464144-70464163 | None:intergenic | 40.0% | |
| AGAAAAAAGGAAAGGCCTAC+AGG | + | chr2_1:70464422-70464441 | Msa0221720:intron | 40.0% | |
| ! | TTGCTAACCGTGGTTCTTTT+TGG | - | chr2_1:70464464-70464483 | None:intergenic | 40.0% |
| CATGAAGTGAACCATTGTGA+TGG | + | chr2_1:70464641-70464660 | Msa0221720:intron | 40.0% | |
| ! | GAGTTGCTGTTGATACTACA+GGG | + | chr2_1:70464864-70464883 | Msa0221720:intron | 40.0% |
| CAAATGTTGGAGGTGATGTA+AGG | - | chr2_1:70465066-70465085 | None:intergenic | 40.0% | |
| ACTTGCTTAACATGCGGTAT+TGG | + | chr2_1:70465094-70465113 | Msa0221720:intron | 40.0% | |
| ! | CTGTCTTCGCAATTTTTGTC+GGG | - | chr2_1:70465565-70465584 | None:intergenic | 40.0% |
| CAATATGGCTTGACCAAGAA+AGG | + | chr2_1:70465739-70465758 | Msa0221720:intron | 40.0% | |
| ACCGCAAGATATTAGTAGAC+AGG | + | chr2_1:70465912-70465931 | Msa0221720:intron | 40.0% | |
| CCCTGTCTACTAATATCTTG+CGG | - | chr2_1:70465916-70465935 | None:intergenic | 40.0% | |
| CCGCAAGATATTAGTAGACA+GGG | + | chr2_1:70465913-70465932 | Msa0221720:intron | 40.0% | |
| TATTAGTAGACAGGGATGCA+TGG | + | chr2_1:70465921-70465940 | Msa0221720:intron | 40.0% | |
| TTGCACAAGTTTCAGCACAA+AGG | + | chr2_1:70465988-70466007 | Msa0221720:intron | 40.0% | |
| TGCACAAGTTTCAGCACAAA+GGG | + | chr2_1:70465989-70466008 | Msa0221720:intron | 40.0% | |
| CCAGTTTGTGATCAACTGTT+AGG | - | chr2_1:70466123-70466142 | None:intergenic | 40.0% | |
| CCTAACAGTTGATCACAAAC+TGG | + | chr2_1:70466120-70466139 | Msa0221720:intron | 40.0% | |
| !! | GTAGGAAGACTTGGTGTATT+TGG | + | chr2_1:70466189-70466208 | Msa0221720:intron | 40.0% |
| TGCCTATCTAGATCAATAGG+AGG | + | chr2_1:70466232-70466251 | Msa0221720:intron | 40.0% | |
| TGCCTCCTATTGATCTAGAT+AGG | - | chr2_1:70466237-70466256 | None:intergenic | 40.0% | |
| ! | ATCAATAGGAGGCACAAATG+TGG | + | chr2_1:70466243-70466262 | Msa0221720:intron | 40.0% |
| ! | TCAATAGGAGGCACAAATGT+GGG | + | chr2_1:70466244-70466263 | Msa0221720:intron | 40.0% |
| AGTTTCACTTGCTCAACATG+TGG | - | chr2_1:70466276-70466295 | None:intergenic | 40.0% | |
| ! | ATGCTGGTTATAGCCTTTGA+TGG | + | chr2_1:70466301-70466320 | Msa0221720:intron | 40.0% |
| AGCATCCCAATTACCATCAA+AGG | - | chr2_1:70466317-70466336 | None:intergenic | 40.0% | |
| !! | ACTGAAGCTCTAAGATCTAG+AGG | + | chr2_1:70466406-70466425 | Msa0221720:intron | 40.0% |
| !!! | TTCTTTTTTGGAGTTGGTGG+TGG | - | chr2_1:70466492-70466511 | None:intergenic | 40.0% |
| !!! | GGTTTCTTTTTTGGAGTTGG+TGG | - | chr2_1:70466495-70466514 | None:intergenic | 40.0% |
| TTCCAGAGTGAGAATCAGTT+GGG | - | chr2_1:70466571-70466590 | None:intergenic | 40.0% | |
| TTTCCAGAGTGAGAATCAGT+TGG | - | chr2_1:70466572-70466591 | None:intergenic | 40.0% | |
| ! | TCAGCAGAAAGCATGAACAA+GGG | - | chr2_1:70466723-70466742 | None:intergenic | 40.0% |
| ! | ATCAGCAGAAAGCATGAACA+AGG | - | chr2_1:70466724-70466743 | None:intergenic | 40.0% |
| TGCTTTCTGCTGATGAATGA+AGG | + | chr2_1:70466730-70466749 | Msa0221720:intron | 40.0% | |
| ATTACATAGGCCACAAGATC+TGG | - | chr2_1:70466803-70466822 | None:intergenic | 40.0% | |
| CAAAACACGTGTCATCTACT+AGG | + | chr2_1:70466869-70466888 | Msa0221720:intron | 40.0% | |
| GTTTACCTCTTGAATGCACA+GGG | - | chr2_1:70466929-70466948 | None:intergenic | 40.0% | |
| AGTTTACCTCTTGAATGCAC+AGG | - | chr2_1:70466930-70466949 | None:intergenic | 40.0% | |
| TTGTTTGTGGTGAAATGGTC+AGG | + | chr2_1:70467156-70467175 | Msa0221720:intron | 40.0% | |
| ! | TCTCCATGGAATTTTTGCGA+TGG | + | chr2_1:70467336-70467355 | Msa0221720:intron | 40.0% |
| CTACCATCGCAAAAATTCCA+TGG | - | chr2_1:70467342-70467361 | None:intergenic | 40.0% | |
| ! | TTTTGCGATGGTAGTTCGTA+AGG | + | chr2_1:70467348-70467367 | Msa0221720:intron | 40.0% |
| TTTGCGATGGTAGTTCGTAA+GGG | + | chr2_1:70467349-70467368 | Msa0221720:intron | 40.0% | |
| ! | GGAGTTAACATCTGAGATGA+TGG | + | chr2_1:70467373-70467392 | Msa0221720:intron | 40.0% |
| TTTGGAGAGTTACCAAAGAG+TGG | + | chr2_1:70467511-70467530 | Msa0221720:intron | 40.0% | |
| ! | CTAGAGCGTAAATTTTGCGG+TGG | + | chr2_1:70462381-70462400 | Msa0221720:five_prime_UTR | 45.0% |
| GTGATGACTTCGGAATTGGT+GGG | - | chr2_1:70462552-70462571 | None:intergenic | 45.0% | |
| AGTGATGACTTCGGAATTGG+TGG | - | chr2_1:70462553-70462572 | None:intergenic | 45.0% | |
| ! | AACCTTATCGGAGAAGGTGT+CGG | - | chr2_1:70462583-70462602 | None:intergenic | 45.0% |
| GTGTTCCATGGTGCAAACAT+TGG | + | chr2_1:70462734-70462753 | Msa0221720:CDS | 45.0% | |
| GCAAGAATTTGGGCTCATTG+TGG | + | chr2_1:70462995-70463014 | Msa0221720:intron | 45.0% | |
| ATTGTGGGATGATGTGGGTA+AGG | + | chr2_1:70463011-70463030 | Msa0221720:CDS | 45.0% | |
| TATGTTGTGGACTTGTGGTG+TGG | + | chr2_1:70463322-70463341 | Msa0221720:intron | 45.0% | |
| ATGTTGTGGACTTGTGGTGT+GGG | + | chr2_1:70463323-70463342 | Msa0221720:intron | 45.0% | |
| TGTCGGTAACAGTGCTTCAT+AGG | - | chr2_1:70463611-70463630 | None:intergenic | 45.0% | |
| !! | ATGAAGCACTGTTACCGACA+CGG | + | chr2_1:70463611-70463630 | Msa0221720:intron | 45.0% |
| ! | GTAGCAACATGTGTCACTGT+CGG | + | chr2_1:70463699-70463718 | Msa0221720:intron | 45.0% |
| AGGCTCTCTATCCTAATGTG+AGG | - | chr2_1:70463785-70463804 | None:intergenic | 45.0% | |
| ! | AAATGGACTTAGGAGGGCAA+GGG | - | chr2_1:70463971-70463990 | None:intergenic | 45.0% |
| ! | CTCCAGAAATGGACTTAGGA+GGG | - | chr2_1:70463977-70463996 | None:intergenic | 45.0% |
| ! | ACTCCAGAAATGGACTTAGG+AGG | - | chr2_1:70463978-70463997 | None:intergenic | 45.0% |
| !! | TGATACAGTGGCATTGGTAG+AGG | - | chr2_1:70464097-70464116 | None:intergenic | 45.0% |
| CAACAGTGATACAGTGGCAT+TGG | - | chr2_1:70464103-70464122 | None:intergenic | 45.0% | |
| AGCTAGGGATGATGCATTTC+TGG | + | chr2_1:70464681-70464700 | Msa0221720:intron | 45.0% | |
| ! | GGAGTTGCTGTTGATACTAC+AGG | + | chr2_1:70464863-70464882 | Msa0221720:intron | 45.0% |
| ! | TTGCTGTTGATACTACAGGG+AGG | + | chr2_1:70464867-70464886 | Msa0221720:intron | 45.0% |
| !! | AGCTCTAAGATCTAGCAGCA+AGG | - | chr2_1:70464933-70464952 | None:intergenic | 45.0% |
| TGCTGCAAAGCTAGTGGTTA+TGG | - | chr2_1:70464957-70464976 | None:intergenic | 45.0% | |
| ATATGGACGCCTTGTCATGT+CGG | - | chr2_1:70464998-70465017 | None:intergenic | 45.0% | |
| ! | TGACAAGGCGTCCATATCAT+TGG | + | chr2_1:70465001-70465020 | Msa0221720:intron | 45.0% |
| CTAGATAGGCATAACCCATC+AGG | + | chr2_1:70465154-70465173 | Msa0221720:intron | 45.0% | |
| ! | ACAACTAGTGGTGGTGAAGT+AGG | - | chr2_1:70465214-70465233 | None:intergenic | 45.0% |
| !! | GGGGTAGTTTTTGTACTGAC+AGG | - | chr2_1:70465280-70465299 | None:intergenic | 45.0% |
| ACACGAAGTTTCAGCACAAG+GGG | - | chr2_1:70465405-70465424 | None:intergenic | 45.0% | |
| GACACGAAGTTTCAGCACAA+GGG | - | chr2_1:70465406-70465425 | None:intergenic | 45.0% | |
| TGACACGAAGTTTCAGCACA+AGG | - | chr2_1:70465407-70465426 | None:intergenic | 45.0% | |
| AACCACTAGAGCGTGAGTAA+GGG | + | chr2_1:70465441-70465460 | Msa0221720:intron | 45.0% | |
| GCAAGATATCAGCACTAGCA+GGG | - | chr2_1:70465482-70465501 | None:intergenic | 45.0% | |
| AGCAAGATATCAGCACTAGC+AGG | - | chr2_1:70465483-70465502 | None:intergenic | 45.0% | |
| AGATTGCCATAGGGTTCTCT+GGG | - | chr2_1:70465606-70465625 | None:intergenic | 45.0% | |
| GAAGTATGAACAAGCTGGCT+TGG | - | chr2_1:70465660-70465679 | None:intergenic | 45.0% | |
| AAGACAGTAACCGCAGTTGA+TGG | - | chr2_1:70465813-70465832 | None:intergenic | 45.0% | |
| CAGCACAAAGGGAAAACTTC+TGG | + | chr2_1:70466000-70466019 | Msa0221720:intron | 45.0% | |
| GAGCGACATGTTACTGCTAT+TGG | + | chr2_1:70466159-70466178 | Msa0221720:intron | 45.0% | |
| CGACATGTTACTGCTATTGG+TGG | + | chr2_1:70466162-70466181 | Msa0221720:intron | 45.0% | |
| !! | ACTGCTATTGGTGGTGAAGT+AGG | + | chr2_1:70466171-70466190 | Msa0221720:intron | 45.0% |
| !! | ACTTGGTGTATTTGGGTTCC+TGG | + | chr2_1:70466197-70466216 | Msa0221720:intron | 45.0% |
| !! | CTCTAAGATCTAGAGGCTCA+AGG | + | chr2_1:70466413-70466432 | Msa0221720:intron | 45.0% |
| GTGAGAATCAGTTGGGACTT+GGG | - | chr2_1:70466564-70466583 | None:intergenic | 45.0% | |
| AGTGAGAATCAGTTGGGACT+TGG | - | chr2_1:70466565-70466584 | None:intergenic | 45.0% | |
| ATCTTCCCTGTGCATTCAAG+AGG | + | chr2_1:70466921-70466940 | Msa0221720:intron | 45.0% | |
| !! | AAGCTTAGGTTGGGGAAAAG+GGG | - | chr2_1:70467101-70467120 | None:intergenic | 45.0% |
| !! | CAAGCTTAGGTTGGGGAAAA+GGG | - | chr2_1:70467102-70467121 | None:intergenic | 45.0% |
| ACTTGTGCCAAGCTTAGGTT+GGG | - | chr2_1:70467110-70467129 | None:intergenic | 45.0% | |
| CTATCACTTGTGCCAAGCTT+AGG | - | chr2_1:70467115-70467134 | None:intergenic | 45.0% | |
| TGGTGAAATGGTCAGGTACA+AGG | + | chr2_1:70467163-70467182 | Msa0221720:intron | 45.0% | |
| GGTGAAATGGTCAGGTACAA+GGG | + | chr2_1:70467164-70467183 | Msa0221720:intron | 45.0% | |
| TAGACGACAACCAGCTCTTA+CGG | + | chr2_1:70467695-70467714 | Msa0221720:three_prime_UTR | 45.0% | |
| ATGGCGTACTGTTCACATTG+AGG | + | chr2_1:70467849-70467868 | Msa0221720:intron | 45.0% | |
| GTGGAGTGGTGAAGCAAACA+AGG | + | chr2_1:70462306-70462325 | Msa0221720:five_prime_UTR | 50.0% | |
| TGAAGCAAACAAGGCACGAG+AGG | + | chr2_1:70462315-70462334 | Msa0221720:five_prime_UTR | 50.0% | |
| GAAGCAAACAAGGCACGAGA+GGG | + | chr2_1:70462316-70462335 | Msa0221720:five_prime_UTR | 50.0% | |
| CGAACGAACCTTATCGGAGA+AGG | - | chr2_1:70462589-70462608 | None:intergenic | 50.0% | |
| GGCTCATTGTGGGATGATGT+GGG | + | chr2_1:70463006-70463025 | Msa0221720:CDS | 50.0% | |
| GGATGATGTGGGTAAGGCAA+TGG | + | chr2_1:70463017-70463036 | Msa0221720:CDS | 50.0% | |
| ! | TGGAGAAGTTGATTGCGGCA+CGG | + | chr2_1:70463062-70463081 | Msa0221720:CDS | 50.0% |
| TGTTGTGGACTTGTGGTGTG+GGG | + | chr2_1:70463324-70463343 | Msa0221720:intron | 50.0% | |
| ! | GAAATGGACTTAGGAGGGCA+AGG | - | chr2_1:70463972-70463991 | None:intergenic | 50.0% |
| TGCCCTCCTAAGTCCATTTC+TGG | + | chr2_1:70463972-70463991 | Msa0221720:intron | 50.0% | |
| GAGCTTTGCTGCAAAGCTAG+TGG | - | chr2_1:70464963-70464982 | None:intergenic | 50.0% | |
| ATGTAGACCCCGACATGACA+AGG | + | chr2_1:70464986-70465005 | Msa0221720:intron | 50.0% | |
| TATGGACGCCTTGTCATGTC+GGG | - | chr2_1:70464997-70465016 | None:intergenic | 50.0% | |
| TATATGGGCTTCATTGCCGC+TGG | - | chr2_1:70465180-70465199 | None:intergenic | 50.0% | |
| !! | GGGAGTGTTACAACTAGTGG+TGG | - | chr2_1:70465223-70465242 | None:intergenic | 50.0% |
| !! | AGGGGGAGTGTTACAACTAG+TGG | - | chr2_1:70465226-70465245 | None:intergenic | 50.0% |
| ACTGACAGGTGATCACAGAC+TGG | - | chr2_1:70465266-70465285 | None:intergenic | 50.0% | |
| CAGCACAAGGGGGAAACTTT+AGG | - | chr2_1:70465394-70465413 | None:intergenic | 50.0% | |
| CACGAAGTTTCAGCACAAGG+GGG | - | chr2_1:70465404-70465423 | None:intergenic | 50.0% | |
| CTTACTCACGCTCTAGTGGT+TGG | - | chr2_1:70465442-70465461 | None:intergenic | 50.0% | |
| CAACCACTAGAGCGTGAGTA+AGG | + | chr2_1:70465440-70465459 | Msa0221720:intron | 50.0% | |
| AAGGATCCCAGAGAACCCTA+TGG | + | chr2_1:70465597-70465616 | Msa0221720:intron | 50.0% | |
| CAGATTGCCATAGGGTTCTC+TGG | - | chr2_1:70465607-70465626 | None:intergenic | 50.0% | |
| ACAGATTGCCTCAGGGTTCT+CGG | + | chr2_1:70465783-70465802 | Msa0221720:intron | 50.0% | |
| TGACCTTACTCGCACTCTAG+TGG | + | chr2_1:70465949-70465968 | Msa0221720:intron | 50.0% | |
| CAACCACTAGAGTGCGAGTA+AGG | - | chr2_1:70465955-70465974 | None:intergenic | 50.0% | |
| CTTACTCGCACTCTAGTGGT+TGG | + | chr2_1:70465953-70465972 | Msa0221720:intron | 50.0% | |
| GGTGGTGAAGTAGGAAGACT+TGG | + | chr2_1:70466180-70466199 | Msa0221720:intron | 50.0% | |
| TAGACTCCAACATGGCATGG+CGG | - | chr2_1:70466356-70466375 | None:intergenic | 50.0% | |
| CATGCCATGTTGGAGTCTAC+CGG | + | chr2_1:70466357-70466376 | Msa0221720:intron | 50.0% | |
| AGAGCTTGCAGCAAAGCTAG+TGG | + | chr2_1:70466381-70466400 | Msa0221720:intron | 50.0% | |
| ! | GTCCCAACTGATTCTCACTC+TGG | + | chr2_1:70466566-70466585 | Msa0221720:intron | 50.0% |
| GGCTTAGTTACTATGGCCCT+TGG | + | chr2_1:70466599-70466618 | Msa0221720:intron | 50.0% | |
| !! | CCAAGCTTAGGTTGGGGAAA+AGG | - | chr2_1:70467103-70467122 | None:intergenic | 50.0% |
| ! | CCTTTTCCCCAACCTAAGCT+TGG | + | chr2_1:70467100-70467119 | Msa0221720:intron | 50.0% |
| ! | CTTGTGCCAAGCTTAGGTTG+GGG | - | chr2_1:70467109-70467128 | None:intergenic | 50.0% |
| CACTTGTGCCAAGCTTAGGT+TGG | - | chr2_1:70467111-70467130 | None:intergenic | 50.0% | |
| GTAAGAGCTGGTTGTCGTCT+AGG | - | chr2_1:70467696-70467715 | None:intergenic | 50.0% | |
| !! | CTTATCGGAGAAGGTGTCGG+AGG | - | chr2_1:70462580-70462599 | None:intergenic | 55.0% |
| CTCCGACACCTTCTCCGATA+AGG | + | chr2_1:70462578-70462597 | Msa0221720:CDS | 55.0% | |
| GGGCTCATTGTGGGATGATG+TGG | + | chr2_1:70463005-70463024 | Msa0221720:CDS | 55.0% | |
| !! | GTCGTGTTTGGTGTCCGTGT+CGG | - | chr2_1:70463628-70463647 | None:intergenic | 55.0% |
| ! | TAGGAGGGCAAGGGTGTGTT+TGG | - | chr2_1:70463962-70463981 | None:intergenic | 55.0% |
| GTTGTCACTGCCACTACTGC+TGG | + | chr2_1:70464131-70464150 | Msa0221720:intron | 55.0% | |
| ATGGACGCCTTGTCATGTCG+GGG | - | chr2_1:70464996-70465015 | None:intergenic | 55.0% | |
| ! | TTCATTGCCGCTGGCCTGAT+GGG | - | chr2_1:70465171-70465190 | None:intergenic | 55.0% |
| CACCCTTACTCACGCTCTAG+TGG | - | chr2_1:70465446-70465465 | None:intergenic | 55.0% | |
| TCAGCACTAGCAGGGATGCA+TGG | - | chr2_1:70465474-70465493 | None:intergenic | 55.0% | |
| CAGATTGCCTCAGGGTTCTC+GGG | + | chr2_1:70465784-70465803 | Msa0221720:intron | 55.0% | |
| AGATTGCCTCAGGGTTCTCG+GGG | + | chr2_1:70465785-70465804 | Msa0221720:intron | 55.0% | |
| TCTCGGGGATCCATCAACTG+CGG | + | chr2_1:70465800-70465819 | Msa0221720:intron | 55.0% | |
| GACTGTCACTGCTGCACTGT+TGG | + | chr2_1:70466049-70466068 | Msa0221720:intron | 55.0% | |
| ! | GTGTATTTGGGTTCCTGGCC+TGG | + | chr2_1:70466202-70466221 | Msa0221720:intron | 55.0% |
| ! | TATTTGGGTTCCTGGCCTGG+TGG | + | chr2_1:70466205-70466224 | Msa0221720:intron | 55.0% |
| ! | ATTTGGGTTCCTGGCCTGGT+GGG | + | chr2_1:70466206-70466225 | Msa0221720:intron | 55.0% |
| CTAGATAGGCATAGCCCACC+AGG | - | chr2_1:70466223-70466242 | None:intergenic | 55.0% | |
| ATATGGCCGCCATGCCATGT+TGG | + | chr2_1:70466347-70466366 | Msa0221720:intron | 55.0% | |
| CGGTAGACTCCAACATGGCA+TGG | - | chr2_1:70466359-70466378 | None:intergenic | 55.0% | |
| TCTGCCGGTAGACTCCAACA+TGG | - | chr2_1:70466364-70466383 | None:intergenic | 55.0% | |
| AGCTTTGCTGCAAGCTCTGC+CGG | - | chr2_1:70466379-70466398 | None:intergenic | 55.0% | |
| GCGATGGTAGTTCGTAAGGG+AGG | + | chr2_1:70467352-70467371 | Msa0221720:intron | 55.0% | |
| GGCATAACCCATCAGGCCAG+CGG | + | chr2_1:70465161-70465180 | Msa0221720:intron | 60.0% | |
| ! | CTTCATTGCCGCTGGCCTGA+TGG | - | chr2_1:70465172-70465191 | None:intergenic | 60.0% |
| ATGGATCCCCGAGAACCCTG+AGG | - | chr2_1:70465794-70465813 | None:intergenic | 60.0% | |
| CGACAACCAGCTCTTACGGC+AGG | + | chr2_1:70467699-70467718 | Msa0221720:three_prime_UTR | 60.0% | |
| CGGCGCACGCAATCTCACTC+CGG | + | chr2_1:70462453-70462472 | Msa0221720:CDS | 65.0% | |
| TAGGCATAGCCCACCAGGCC+AGG | - | chr2_1:70466218-70466237 | None:intergenic | 65.0% | |
| GCACTGCCTGCCGTAAGAGC+TGG | - | chr2_1:70467708-70467727 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 70462305 | 70468108 | 70462305 | ID=Msa0221720;Name=Msa0221720 |
| chr2_1 | mRNA | 70462305 | 70468108 | 70462305 | ID=Msa0221720-mRNA-1;Parent=Msa0221720;Name=Msa0221720-mRNA-1;_AED=0.26;_eAED=0.26;_QI=139|1|1|1|0.6|0.5|6|441|161 |
| chr2_1 | exon | 70462305 | 70462599 | 70462305 | ID=Msa0221720-mRNA-1:exon:20131;Parent=Msa0221720-mRNA-1 |
| chr2_1 | exon | 70462697 | 70462755 | 70462697 | ID=Msa0221720-mRNA-1:exon:20132;Parent=Msa0221720-mRNA-1 |
| chr2_1 | exon | 70462996 | 70463171 | 70462996 | ID=Msa0221720-mRNA-1:exon:20133;Parent=Msa0221720-mRNA-1 |
| chr2_1 | exon | 70467178 | 70467313 | 70467178 | ID=Msa0221720-mRNA-1:exon:20134;Parent=Msa0221720-mRNA-1 |
| chr2_1 | exon | 70467687 | 70467829 | 70467687 | ID=Msa0221720-mRNA-1:exon:20135;Parent=Msa0221720-mRNA-1 |
| chr2_1 | exon | 70467852 | 70468108 | 70467852 | ID=Msa0221720-mRNA-1:exon:20136;Parent=Msa0221720-mRNA-1 |
| chr2_1 | five_prime_UTR | 70462305 | 70462443 | 70462305 | ID=Msa0221720-mRNA-1:five_prime_utr;Parent=Msa0221720-mRNA-1 |
| chr2_1 | CDS | 70462444 | 70462599 | 70462444 | ID=Msa0221720-mRNA-1:cds;Parent=Msa0221720-mRNA-1 |
| chr2_1 | CDS | 70462697 | 70462755 | 70462697 | ID=Msa0221720-mRNA-1:cds;Parent=Msa0221720-mRNA-1 |
| chr2_1 | CDS | 70462996 | 70463171 | 70462996 | ID=Msa0221720-mRNA-1:cds;Parent=Msa0221720-mRNA-1 |
| chr2_1 | CDS | 70467178 | 70467272 | 70467178 | ID=Msa0221720-mRNA-1:cds;Parent=Msa0221720-mRNA-1 |
| chr2_1 | three_prime_UTR | 70467273 | 70467313 | 70467273 | ID=Msa0221720-mRNA-1:three_prime_utr;Parent=Msa0221720-mRNA-1 |
| chr2_1 | three_prime_UTR | 70467687 | 70467829 | 70467687 | ID=Msa0221720-mRNA-1:three_prime_utr;Parent=Msa0221720-mRNA-1 |
| chr2_1 | three_prime_UTR | 70467852 | 70468108 | 70467852 | ID=Msa0221720-mRNA-1:three_prime_utr;Parent=Msa0221720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
