AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0222210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222210 MtrunA17_Chr2g0326911 95.077 711 30 3 1 707 1 710 0.0 1330
Msa0222210 MtrunA17_Chr4g0028831 61.003 718 254 11 1 706 1 704 0.0 814
Msa0222210 MtrunA17_Chr1g0199601 53.261 736 293 14 1 700 1 721 0.0 729
Msa0222210 MtrunA17_Chr3g0141061 31.603 655 347 19 25 624 90 698 7.65e-86 287
Msa0222210 MtrunA17_Chr5g0411491 28.522 575 350 13 68 636 123 642 2.05e-52 193
Msa0222210 MtrunA17_Chr8g0366871 31.626 449 220 11 68 509 99 467 9.68e-48 178
Msa0222210 MtrunA17_Chr2g0290981 28.855 454 230 14 68 506 91 466 4.11e-42 161
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222210 AT5G60710.1 56.980 702 272 15 1 692 1 682 0.0 717
Msa0222210 AT2G38970.1 52.822 691 296 14 1 680 1 672 0.0 689
Msa0222210 AT3G54780.1 50.000 716 304 15 1 705 1 673 0.0 634
Msa0222210 AT1G08050.1 49.927 685 255 17 18 687 19 630 0.0 595
Msa0222210 AT3G54780.4 44.972 716 298 15 1 705 50 680 0.0 536
Msa0222210 AT3G54780.3 44.972 716 298 15 1 705 1 631 0.0 536
Msa0222210 AT3G54780.2 44.972 716 297 16 1 705 1 630 0.0 532
Msa0222210 AT3G54780.5 44.972 716 297 16 1 705 50 679 0.0 531
Msa0222210 AT5G49665.1 32.969 640 342 25 23 624 79 669 6.54e-69 240
Msa0222210 AT2G22680.1 30.185 593 309 19 56 622 118 631 2.27e-55 201
Msa0222210 AT5G65683.1 30.598 585 318 21 67 621 135 661 3.40e-52 193
Msa0222210 AT4G37890.1 28.344 628 319 19 58 639 155 697 2.40e-45 173
Msa0222210 AT4G37890.2 28.299 629 320 19 56 639 127 669 5.48e-45 172

Find 171 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCCATCTCTGAGATTTC+TGG 0.149004 2_1:+71226165 Msa0222210:CDS
ATGCCCTTTGACATCTTTCT+AGG 0.204633 2_1:-71226686 None:intergenic
CAGCCGTGGTACAAATATTA+TGG 0.206889 2_1:-71226023 None:intergenic
AGAAGGTTGATCGGAGGTTT+TGG 0.216050 2_1:-71222430 None:intergenic
TCCGCCTCCGGTGCTGTTTC+CGG 0.216463 2_1:+71222477 Msa0222210:CDS
TCAGGAATGAGCTCTCATTT+AGG 0.216817 2_1:+71226837 Msa0222210:CDS
TGAAGCTGAGGGAGTGATTC+AGG 0.261473 2_1:+71226206 Msa0222210:CDS
ATTATTATTATGTTGTGTTA+TGG 0.294496 2_1:-71222219 None:intergenic
ATCACATCTAATGTAAGATA+TGG 0.296050 2_1:+71225217 Msa0222210:CDS
ATGCGTTCGCTCAGTGTATT+GGG 0.300640 2_1:+71226229 Msa0222210:CDS
TACTGTATTGGTTCATCTTA+AGG 0.301727 2_1:+71225594 Msa0222210:CDS
CAGGAATGAGCTCTCATTTA+GGG 0.312405 2_1:+71226838 Msa0222210:CDS
AAAATACCAGTTCATGCATT+TGG 0.324945 2_1:+71226111 Msa0222210:CDS
GTAGCAAAATGGAATCTAAA+TGG 0.331334 2_1:+71222358 Msa0222210:exon
TTATTATTATGTTGTGTTAT+GGG 0.339869 2_1:-71222218 None:intergenic
CCAGTTCATGCATTTGGTTT+TGG 0.339898 2_1:+71226117 Msa0222210:CDS
TTTGAAACAGCTGAAACTTC+AGG 0.345341 2_1:-71225550 None:intergenic
CGTTATTCCATCAAACAAAA+TGG 0.345742 2_1:+71225622 Msa0222210:CDS
GCAATGTCTGTTCCACCATT+TGG 0.346299 2_1:-71225907 None:intergenic
TCAGAATAACTTTACTGTAT+TGG 0.348935 2_1:+71225582 Msa0222210:CDS
GATGCGTTCGCTCAGTGTAT+TGG 0.355558 2_1:+71226228 Msa0222210:CDS
TGCAAGAATGGCTTCTATAA+AGG 0.357597 2_1:+71226365 Msa0222210:CDS
CACTCCCTCAGCTTCAATAA+AGG 0.363306 2_1:-71226199 None:intergenic
ATTTGTACCACGGCTGGTAT+TGG 0.375696 2_1:+71226030 Msa0222210:CDS
TTTCATTGCATTCAAGCATA+TGG 0.378551 2_1:-71225134 None:intergenic
CTCCCTCCCGTGACTATTGT+GGG 0.385561 2_1:+71222290 Msa0222210:five_prime_UTR
GGAAGAGCTTATGTACTATC+AGG 0.395695 2_1:+71226819 Msa0222210:CDS
CGACGTGTTTATGAAGAATC+TGG 0.397253 2_1:+71226798 Msa0222210:CDS
AGGATTGAAGAAAGGGGTTA+AGG 0.407262 2_1:+71225933 Msa0222210:CDS
TTCTCTTTCTGCTGAACTAA+AGG 0.408085 2_1:+71226752 Msa0222210:CDS
GCTTGATCTCTAGCCACATT+AGG 0.417939 2_1:-71226555 None:intergenic
TTGCTGAAGGATTGAAGAAA+GGG 0.417942 2_1:+71225926 Msa0222210:CDS
GCCCTGTTTGCAGAGCAAAA+TGG 0.423012 2_1:+71225251 Msa0222210:CDS
TCATCACTAGATTTCTCAAC+TGG 0.425202 2_1:-71226441 None:intergenic
GCAGAAAGAGAAGTACATAA+TGG 0.430963 2_1:-71226741 None:intergenic
CCTCCCTCCCGTGACTATTG+TGG 0.435717 2_1:+71222289 Msa0222210:five_prime_UTR
CGACCTACTAAATCCTTTAG+TGG 0.436730 2_1:+71226999 Msa0222210:CDS
ATTGCGTGTAATTAACGCTT+TGG 0.437595 2_1:+71225882 Msa0222210:CDS
CTGTATCAATAGAAGTAGAT+AGG 0.440436 2_1:+71226577 Msa0222210:CDS
CATTGTTAGTCAATGTACTT+TGG 0.441078 2_1:-71226344 None:intergenic
TCTTTGTTGCCGACCACTAA+AGG 0.442019 2_1:-71227012 None:intergenic
CGAAAACTCAAACTTGCTCT+TGG 0.442562 2_1:+71222381 Msa0222210:CDS
TGTCAGCCATGGAAGGAGTT+TGG 0.444144 2_1:-71226917 None:intergenic
CCAAAACCAAATGCATGAAC+TGG 0.449011 2_1:-71226117 None:intergenic
AGCCGTGGTACAAATATTAT+GGG 0.454221 2_1:-71226022 None:intergenic
CGGAGTAGAGGGACGGCGAC+CGG 0.455656 2_1:-71222496 None:intergenic
GAGGAAGGTGTCGGAGTAGA+GGG 0.460036 2_1:-71222507 None:intergenic
TAGATGTGATGCATTGGAAA+TGG 0.463066 2_1:-71225204 None:intergenic
ACCGGAAACAGCACCGGAGG+CGG 0.471968 2_1:-71222478 None:intergenic
GACATAAGTGGTAGCATGAC+TGG 0.473704 2_1:+71225712 Msa0222210:CDS
TCATCGTCGTCAAAGATAGT+TGG 0.475676 2_1:-71225439 None:intergenic
CCTGACCAGGTGTCACCTCT+TGG 0.476199 2_1:-71225328 None:intergenic
ATTGACTAACAATGCAAGAA+TGG 0.476863 2_1:+71226353 Msa0222210:CDS
GAATGATGCTGCGCGACAGC+AGG 0.479092 2_1:+71225858 Msa0222210:CDS
GTGTCCTCACAAGAATGGTC+TGG 0.482856 2_1:-71226953 None:intergenic
TCACATCTAATGTAAGATAT+GGG 0.483345 2_1:+71225218 Msa0222210:CDS
TGCTGAACTAAAGGAGATGC+AGG 0.485753 2_1:+71226761 Msa0222210:CDS
ATCCTCCTCTTCATCCTCCA+AGG 0.491259 2_1:+71222551 Msa0222210:CDS
GATCGTCTCTCATCCGCCTC+CGG 0.491269 2_1:+71222465 Msa0222210:CDS
AACTCCTTCCATGGCTGACA+TGG 0.492956 2_1:+71226920 Msa0222210:CDS
TGACGACGATGATGAAGTCT+TGG 0.493855 2_1:+71225450 Msa0222210:CDS
CAACTTAGTTCAGTAAAAGC+AGG 0.495301 2_1:+71226315 Msa0222210:CDS
CATAATATTTGTACCACGGC+TGG 0.499402 2_1:+71226024 Msa0222210:CDS
CTCTTGGTTGAGAGATGTCA+TGG 0.502976 2_1:-71225312 None:intergenic
CTTTCTTCCTCGCGACAGAA+TGG 0.505139 2_1:+71225364 Msa0222210:CDS
GGAGGATGAAGAGGAGGATG+AGG 0.507063 2_1:-71222547 None:intergenic
GGAGGAAGGTGTCGGAGTAG+AGG 0.507967 2_1:-71222508 None:intergenic
AAAATGGCCTGCCCCTGCCC+TGG 0.508478 2_1:-71225157 None:intergenic
GGATGAGGAGAGACGGAGAC+CGG 0.509197 2_1:-71222532 None:intergenic
TTACATTAGATGTGATGCAT+TGG 0.513211 2_1:-71225210 None:intergenic
AAGATCTACATGTAGAAGTT+CGG 0.513674 2_1:+71226274 Msa0222210:CDS
TGCTTGAATGCAATGAAACC+AGG 0.514205 2_1:+71225139 Msa0222210:CDS
AACGCTTTGGTTCCAAATGG+TGG 0.514397 2_1:+71225895 Msa0222210:CDS
CCACAATAGTCACGGGAGGG+AGG 0.517625 2_1:-71222289 None:intergenic
AATGAAACCAGGGCAGGGGC+AGG 0.522072 2_1:+71225150 Msa0222210:CDS
AGCTACTGAGGCAATGGCTG+AGG 0.522647 2_1:+71226617 Msa0222210:CDS
CCAAGAGGTGACACCTGGTC+AGG 0.524173 2_1:+71225328 Msa0222210:CDS
CGCGACAGAATGGTTCAGTT+CGG 0.524264 2_1:+71225374 Msa0222210:CDS
GGTATCATGTTACTAACTGA+TGG 0.525118 2_1:+71225991 Msa0222210:CDS
CACAATAGTCACGGGAGGGA+GGG 0.525170 2_1:-71222288 None:intergenic
AAGAGGAGGATGAGGAGAGA+CGG 0.528219 2_1:-71222539 None:intergenic
ACTCCGACACCTTCCTCCTC+CGG 0.530734 2_1:+71222513 Msa0222210:CDS
GGAGAGACGGAGACCGGAGG+AGG 0.535327 2_1:-71222526 None:intergenic
TTCGCCGTTAGTACGATGAA+TGG 0.535371 2_1:-71226082 None:intergenic
CGACCACTAAAGGATTTAGT+AGG 0.535697 2_1:-71227002 None:intergenic
AATAGTCACGGGAGGGAGGG+AGG 0.537853 2_1:-71222285 None:intergenic
CGATCGGAGATGGAGGAAGA+AGG 0.538906 2_1:-71222447 None:intergenic
ACGGCGACCGGAAACAGCAC+CGG 0.539715 2_1:-71222484 None:intergenic
TGTCCTAGAAAGATGTCAAA+GGG 0.539877 2_1:+71226683 Msa0222210:CDS
GAATGCAATGAAACCAGGGC+AGG 0.540422 2_1:+71225144 Msa0222210:CDS
TGTCCTCACAAGAATGGTCT+GGG 0.541184 2_1:-71226952 None:intergenic
ATTGCTGAAGGATTGAAGAA+AGG 0.541474 2_1:+71225925 Msa0222210:CDS
CCATCAAACAAAATGGTGGC+AGG 0.542831 2_1:+71225629 Msa0222210:CDS
TTGGTACGCACGCACAAAGC+TGG 0.543489 2_1:-71226898 None:intergenic
GATGGAGGAAGAAGGTTGAT+CGG 0.545533 2_1:-71222439 None:intergenic
ATTAACGCTTTGGTTCCAAA+TGG 0.547441 2_1:+71225892 Msa0222210:CDS
TTAGTACGATGAATGGAGTT+CGG 0.551591 2_1:-71226075 None:intergenic
GTCGTAGAGGGAAGATGCGA+CGG 0.555460 2_1:-71225831 None:intergenic
TGCGTACCAAACTCCTTCCA+TGG 0.555636 2_1:+71226911 Msa0222210:CDS
TCATAGCATAGAAAATAGAA+TGG 0.556266 2_1:+71225513 Msa0222210:CDS
GCCTCCAGAAATCTCAGAGA+TGG 0.557635 2_1:-71226169 None:intergenic
CTACTAAATCCTTTAGTGGT+CGG 0.561787 2_1:+71227003 Msa0222210:CDS
GAAACTATTTCTGCTCAAGC+CGG 0.565601 2_1:+71226714 Msa0222210:CDS
AGAAGTACATAATGGATCAC+CGG 0.567531 2_1:-71226733 None:intergenic
GAAGAAAGAGATGGTAGTAA+TGG 0.568105 2_1:-71222313 None:intergenic
CTCAACCAAGAGGTGACACC+TGG 0.568428 2_1:+71225323 Msa0222210:CDS
CTGTCCTAGAAAGATGTCAA+AGG 0.569794 2_1:+71226682 Msa0222210:CDS
AGACGGAGACCGGAGGAGGA+AGG 0.571440 2_1:-71222522 None:intergenic
TGAGAGACGATCGGAGATGG+AGG 0.571484 2_1:-71222454 None:intergenic
ACGTGAAACCATGTCAGCCA+TGG 0.572051 2_1:-71226928 None:intergenic
CATCATTCATCCGTCGTAGA+GGG 0.573178 2_1:-71225843 None:intergenic
GTCACAGTTCTAGACATAAG+TGG 0.575659 2_1:+71225700 Msa0222210:CDS
CACAAAGCTGGTGGAGTCTG+TGG 0.575874 2_1:-71226886 None:intergenic
ACTTCAAGCTACTGAGGCAA+TGG 0.575955 2_1:+71226611 Msa0222210:CDS
ATAGTCACGGGAGGGAGGGA+GGG 0.577506 2_1:-71222284 None:intergenic
GGAGGAAGAAGGTTGATCGG+AGG 0.580586 2_1:-71222436 None:intergenic
GGATGAGAGACGATCGGAGA+TGG 0.581101 2_1:-71222457 None:intergenic
ATGCAATGAAACCAGGGCAG+GGG 0.581853 2_1:+71225146 Msa0222210:CDS
GGGCAAAGAGCAACTGCAAG+AGG 0.582216 2_1:+71226858 Msa0222210:CDS
ACCACGGCTGGTATTGGAGA+AGG 0.582988 2_1:+71226036 Msa0222210:CDS
GCGACCGGAAACAGCACCGG+AGG 0.583644 2_1:-71222481 None:intergenic
GCATCATTCATCCGTCGTAG+AGG 0.583839 2_1:-71225844 None:intergenic
GCAAACCTTGGAGGATGAAG+AGG 0.584003 2_1:-71222556 None:intergenic
AACTCCATTCATCGTACTAA+CGG 0.584465 2_1:+71226078 Msa0222210:CDS
TGCGTTCGCTCAGTGTATTG+GGG 0.589162 2_1:+71226230 Msa0222210:CDS
GATGAAAATGCAAACCTTGG+AGG 0.592311 2_1:-71222565 None:intergenic
CAATAGAAGTAGATAGGCAA+AGG 0.593503 2_1:+71226583 Msa0222210:CDS
TCGTAGAGGGAAGATGCGAC+GGG 0.594023 2_1:-71225830 None:intergenic
TCTTCGTAGTATACCTGACC+AGG 0.594250 2_1:-71225341 None:intergenic
AGAATGGCTTCTATAAAGGT+AGG 0.594606 2_1:+71226369 Msa0222210:CDS
ATTCATCGTACTAACGGCGA+AGG 0.595421 2_1:+71226084 Msa0222210:CDS
AACCTTGGAGGATGAAGAGG+AGG 0.595748 2_1:-71222553 None:intergenic
AATGATAGAAAGACGGTCTG+AGG 0.603147 2_1:-71225791 None:intergenic
TCCATCTCTGAGATTTCTGG+AGG 0.604262 2_1:+71226168 Msa0222210:CDS
GCACGAGAGGTCTCAACTGA+AGG 0.604673 2_1:-71225664 None:intergenic
AGAGATGTCATGGGACACAT+TGG 0.606263 2_1:-71225302 None:intergenic
TAATGGCCCACAATAGTCAC+GGG 0.608670 2_1:-71222296 None:intergenic
TTGTGGTGTCCTCACAAGAA+TGG 0.610139 2_1:-71226958 None:intergenic
GCGTTCGCTCAGTGTATTGG+GGG 0.613283 2_1:+71226231 Msa0222210:CDS
AAGATCAACTTGAGCACGAG+AGG 0.615751 2_1:-71225677 None:intergenic
ACCTTCTCCAATACCAGCCG+TGG 0.617152 2_1:-71226037 None:intergenic
AATGCAATGAAACCAGGGCA+GGG 0.618792 2_1:+71225145 Msa0222210:CDS
GAATAGACTTCAAGCTACTG+AGG 0.619555 2_1:+71226605 Msa0222210:CDS
AGACCGGAGGAGGAAGGTGT+CGG 0.621586 2_1:-71222516 None:intergenic
AACTGAACCATTCTGTCGCG+AGG 0.621728 2_1:-71225371 None:intergenic
GAAACCATGTCAGCCATGGA+AGG 0.623228 2_1:-71226924 None:intergenic
CCACTGGATTCTTCCATCGA+CGG 0.623669 2_1:-71225966 None:intergenic
GTAATGGCCCACAATAGTCA+CGG 0.626828 2_1:-71222297 None:intergenic
TGAGGAGAGACGGAGACCGG+AGG 0.628605 2_1:-71222529 None:intergenic
GGCCCACAATAGTCACGGGA+GGG 0.641441 2_1:-71222292 None:intergenic
GTACGCACGCACAAAGCTGG+TGG 0.645933 2_1:-71226895 None:intergenic
GGTGGAACAGACATTGCTGA+AGG 0.649838 2_1:+71225913 Msa0222210:CDS
TATTCCATCAAACAAAATGG+TGG 0.653715 2_1:+71225625 Msa0222210:CDS
AGAACACAATGATAGAAAGA+CGG 0.655615 2_1:-71225798 None:intergenic
AAGGTGTCGGAGTAGAGGGA+CGG 0.657455 2_1:-71222503 None:intergenic
GTTCCCAGACCATTCTTGTG+AGG 0.658249 2_1:+71226949 Msa0222210:CDS
GAAGATTCAGAGACCTAATG+TGG 0.658620 2_1:+71226542 Msa0222210:CDS
TGGCCCACAATAGTCACGGG+AGG 0.659674 2_1:-71222293 None:intergenic
TACCCATAATATTTGTACCA+CGG 0.660942 2_1:+71226020 Msa0222210:CDS
GCTTGAATGCAATGAAACCA+GGG 0.663531 2_1:+71225140 Msa0222210:CDS
CGTCGATGGAAGAATCCAGT+GGG 0.666439 2_1:+71225967 Msa0222210:CDS
CCGTCGATGGAAGAATCCAG+TGG 0.666461 2_1:+71225966 Msa0222210:CDS
TGCTGAAGGATTGAAGAAAG+GGG 0.668132 2_1:+71225927 Msa0222210:CDS
AAAGCGACGGAAGAAAGAGA+TGG 0.672654 2_1:-71222322 None:intergenic
AGTAACATGATACCACCCAC+TGG 0.674632 2_1:-71225982 None:intergenic
GTCGCATCTTCCCTCTACGA+CGG 0.674767 2_1:+71225833 Msa0222210:CDS
TCTTGGTTGAGAGATGTCAT+GGG 0.675146 2_1:-71225311 None:intergenic
CGATGGAAGAATCCAGTGGG+TGG 0.680485 2_1:+71225970 Msa0222210:CDS
GGAGGCGGATGAGAGACGAT+CGG 0.682863 2_1:-71222463 None:intergenic
GCTAGAGTCGAAGCAGAACG+TGG 0.688623 2_1:+71226639 Msa0222210:CDS
CATGACATCTCTCAACCAAG+AGG 0.689767 2_1:+71225313 Msa0222210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAATTAATAAAATGTAA+TGG - chr2_1:71223671-71223690 None:intergenic 10.0%
!!! TATTTTATTTTATTTCATCT+TGG + chr2_1:71224957-71224976 Msa0222210:intron 10.0%
!! TTATTATTATGTTGTGTTAT+GGG - chr2_1:71222221-71222240 None:intergenic 15.0%
!! ATTATTATTATGTTGTGTTA+TGG - chr2_1:71222222-71222241 None:intergenic 15.0%
!!! ATGTTGTTGTTTTAATTTTA+GGG + chr2_1:71222771-71222790 Msa0222210:intron 15.0%
!!! ATTTTTTGTATTTTGATATG+TGG + chr2_1:71223247-71223266 Msa0222210:intron 15.0%
!!! TTTTTTGTATTTTGATATGT+GGG + chr2_1:71223248-71223267 Msa0222210:intron 15.0%
!!! TTAATAAAATGTAATGGAAA+GGG - chr2_1:71223665-71223684 None:intergenic 15.0%
!!! ATTAATAAAATGTAATGGAA+AGG - chr2_1:71223666-71223685 None:intergenic 15.0%
!! ATAAAAATATCATCAAAACA+AGG - chr2_1:71223733-71223752 None:intergenic 15.0%
!!! AAAAAATTGTTGTGATTTTT+TGG + chr2_1:71224541-71224560 Msa0222210:intron 15.0%
!!! CTAATTTGCATGTAATTATT+AGG + chr2_1:71222668-71222687 Msa0222210:intron 20.0%
!!! TAATTATTAGGTTGTAATCA+CGG + chr2_1:71222680-71222699 Msa0222210:intron 20.0%
!!! GATGTTGTTGTTTTAATTTT+AGG + chr2_1:71222770-71222789 Msa0222210:intron 20.0%
!!! TTTAATTTTAGGGATAGTAA+TGG + chr2_1:71222781-71222800 Msa0222210:intron 20.0%
!!! TGGTTTCATTATTCATTTTA+TGG + chr2_1:71222837-71222856 Msa0222210:intron 20.0%
!!! TTTCATTATTCATTTTATGG+CGG + chr2_1:71222840-71222859 Msa0222210:intron 20.0%
!!! AGAATGTCATTTTTATAGAT+TGG + chr2_1:71223029-71223048 Msa0222210:intron 20.0%
!! AATCAAATCACAAATATTTG+TGG - chr2_1:71223069-71223088 None:intergenic 20.0%
!! ACAAATATTTGTGATTTGAT+TGG + chr2_1:71223068-71223087 Msa0222210:intron 20.0%
!! CCTCAAAATTAAATTAACTA+TGG - chr2_1:71223154-71223173 None:intergenic 20.0%
!!! CCATAGTTAATTTAATTTTG+AGG + chr2_1:71223151-71223170 Msa0222210:intron 20.0%
!! GTAAATATAAAAGAGTTGAA+TGG + chr2_1:71223288-71223307 Msa0222210:intron 20.0%
!! AATAATGTAAAAGAGTTGAA+TGG + chr2_1:71223311-71223330 Msa0222210:intron 20.0%
!! ATTACAAATAAGAGACATTT+AGG + chr2_1:71223446-71223465 Msa0222210:intron 20.0%
!!! ATTTGCAATTTTGATACATT+TGG + chr2_1:71223474-71223493 Msa0222210:intron 20.0%
!! ATTTCATCCATATTTCATTT+GGG - chr2_1:71223550-71223569 None:intergenic 20.0%
!! AACTTAATAAGTTGTAGATT+TGG + chr2_1:71223926-71223945 Msa0222210:intron 20.0%
!!! TTTTCCTTCTTTTAAAAGTT+TGG + chr2_1:71224356-71224375 Msa0222210:intron 20.0%
!! AAATTGTTACAAAAGCTTAA+TGG - chr2_1:71224779-71224798 None:intergenic 20.0%
!! GTTATCTAAATTACATTCTA+AGG + chr2_1:71224829-71224848 Msa0222210:intron 20.0%
!! AATTATTAGGTTGTAATCAC+GGG + chr2_1:71222681-71222700 Msa0222210:intron 25.0%
!! TAGACAACTAGTTTCATAAA+GGG - chr2_1:71222909-71222928 None:intergenic 25.0%
!!! AATGATGTTTTTTACTCCAT+AGG - chr2_1:71223186-71223205 None:intergenic 25.0%
!!! ACATTGAGACAAGTTATTTT+AGG + chr2_1:71223378-71223397 Msa0222210:intron 25.0%
! TTGCAATTTCAGTATATTCT+AGG - chr2_1:71223404-71223423 None:intergenic 25.0%
! CATTTCATCCATATTTCATT+TGG - chr2_1:71223551-71223570 None:intergenic 25.0%
! ACGTAATTAGACATGTAATA+GGG + chr2_1:71223967-71223986 Msa0222210:intron 25.0%
! TTGTATTTATCTATGGATAC+AGG + chr2_1:71224213-71224232 Msa0222210:intron 25.0%
!! CTAAATTACATTCTAAGGAA+AGG + chr2_1:71224834-71224853 Msa0222210:intron 25.0%
! TTAGATTATATCAACATGGT+TGG + chr2_1:71224870-71224889 Msa0222210:intron 25.0%
! TTTGAATGATATCATCTACA+TGG + chr2_1:71224931-71224950 Msa0222210:intron 25.0%
!!! TTTTATTTCATCTTGGTTTG+TGG + chr2_1:71224964-71224983 Msa0222210:intron 25.0%
!!! TTTATTTCATCTTGGTTTGT+GGG + chr2_1:71224965-71224984 Msa0222210:intron 25.0%
!!! AGTTTTGTTTAATGTCTACT+AGG + chr2_1:71225002-71225021 Msa0222210:intron 25.0%
! AAGAAAGAAAGAAAAAAGTG+AGG - chr2_1:71225091-71225110 None:intergenic 25.0%
!! TTCTTTCTTTTACATTCTGT+AGG + chr2_1:71225102-71225121 Msa0222210:intron 25.0%
!! TCTTTCTTTTACATTCTGTA+GGG + chr2_1:71225103-71225122 Msa0222210:intron 25.0%
! ATCACATCTAATGTAAGATA+TGG + chr2_1:71225217-71225236 Msa0222210:CDS 25.0%
! TCACATCTAATGTAAGATAT+GGG + chr2_1:71225218-71225237 Msa0222210:CDS 25.0%
! TCATAGCATAGAAAATAGAA+TGG + chr2_1:71225513-71225532 Msa0222210:CDS 25.0%
! TCAGAATAACTTTACTGTAT+TGG + chr2_1:71225582-71225601 Msa0222210:CDS 25.0%
!!! ATTTTGTTTGATGGAATAAC+GGG - chr2_1:71225623-71225642 None:intergenic 25.0%
!!! CATTTTGTTTGATGGAATAA+CGG - chr2_1:71225624-71225643 None:intergenic 25.0%
!! AGAATATTTTCAGATGATTG+TGG - chr2_1:71226978-71226997 None:intergenic 25.0%
! ATTCCATTTTGCTACGAAAA+TGG - chr2_1:71222353-71222372 None:intergenic 30.0%
GTAGCAAAATGGAATCTAAA+TGG + chr2_1:71222358-71222377 Msa0222210:exon 30.0%
ATTGATGAAAATGCAAACCT+TGG - chr2_1:71222571-71222590 None:intergenic 30.0%
! CTAGACAACTAGTTTCATAA+AGG - chr2_1:71222910-71222929 None:intergenic 30.0%
! GTCTAGTTTATGTGAAAAAG+TGG + chr2_1:71222924-71222943 Msa0222210:intron 30.0%
AGTGGTTGTGTAATTTACTA+AGG + chr2_1:71222942-71222961 Msa0222210:intron 30.0%
GTGGTTGTGTAATTTACTAA+GGG + chr2_1:71222943-71222962 Msa0222210:intron 30.0%
! GTTTAATTTCTATGCACTGA+CGG + chr2_1:71222965-71222984 Msa0222210:intron 30.0%
AGAGTTGAATGGAATAAAGT+AGG + chr2_1:71223322-71223341 Msa0222210:intron 30.0%
GAGTTGAATGGAATAAAGTA+GGG + chr2_1:71223323-71223342 Msa0222210:intron 30.0%
TGTAATTAAACAGACACTTG+AGG - chr2_1:71223432-71223451 None:intergenic 30.0%
CACATATTCAAGGATCAAAA+TGG + chr2_1:71223517-71223536 Msa0222210:intron 30.0%
ATGGATGAAATGTAATAGAG+TGG + chr2_1:71223559-71223578 Msa0222210:intron 30.0%
!! AATGACATGAACTTGTTGAT+TGG + chr2_1:71223592-71223611 Msa0222210:intron 30.0%
!! GAACTTGTTGATTGGAAAAT+TGG + chr2_1:71223600-71223619 Msa0222210:intron 30.0%
! TGTTGATTGGAAAATTGGAA+TGG + chr2_1:71223605-71223624 Msa0222210:intron 30.0%
! TAGTAGAAAAGTGTGAATGA+AGG + chr2_1:71223690-71223709 Msa0222210:intron 30.0%
! TACCATTTTCAGCAAAGTAA+AGG - chr2_1:71223826-71223845 None:intergenic 30.0%
TTTACTTTGCTGAAAATGGT+AGG + chr2_1:71223825-71223844 Msa0222210:intron 30.0%
AAAGAAAAAAAGTCAGCGTT+TGG - chr2_1:71223897-71223916 None:intergenic 30.0%
TAATAAGTTGTAGATTTGGC+AGG + chr2_1:71223930-71223949 Msa0222210:intron 30.0%
AATAAGTTGTAGATTTGGCA+GGG + chr2_1:71223931-71223950 Msa0222210:intron 30.0%
TGTCTAATTACGTCAACTAT+AGG - chr2_1:71223960-71223979 None:intergenic 30.0%
GACGTAATTAGACATGTAAT+AGG + chr2_1:71223966-71223985 Msa0222210:intron 30.0%
AATTAGACATGTAATAGGGA+TGG + chr2_1:71223971-71223990 Msa0222210:intron 30.0%
ATTAGACATGTAATAGGGAT+GGG + chr2_1:71223972-71223991 Msa0222210:intron 30.0%
CAAAAACCAGTGCATAAAAA+AGG - chr2_1:71224129-71224148 None:intergenic 30.0%
!!! TTTTTATGCACTGGTTTTTG+TGG + chr2_1:71224129-71224148 Msa0222210:intron 30.0%
! GCGACTTTTGTATTTATCTA+TGG + chr2_1:71224206-71224225 Msa0222210:intron 30.0%
CAGTCATAATTGAAAAAAGG+GGG - chr2_1:71224755-71224774 None:intergenic 30.0%
CCAGTCATAATTGAAAAAAG+GGG - chr2_1:71224756-71224775 None:intergenic 30.0%
GCCAGTCATAATTGAAAAAA+GGG - chr2_1:71224757-71224776 None:intergenic 30.0%
! CTACTAAGCATTGTTGAATA+AGG + chr2_1:71224895-71224914 Msa0222210:intron 30.0%
TTTCATTGCATTCAAGCATA+TGG - chr2_1:71225137-71225156 None:intergenic 30.0%
AGAACATTCTGCAGTAAAAA+TGG - chr2_1:71225176-71225195 None:intergenic 30.0%
TTACATTAGATGTGATGCAT+TGG - chr2_1:71225213-71225232 None:intergenic 30.0%
!! TTGGATGCAGTATTTTGAAA+AGG - chr2_1:71225286-71225305 None:intergenic 30.0%
!! TACTGTATTGGTTCATCTTA+AGG + chr2_1:71225594-71225613 Msa0222210:CDS 30.0%
!! TTTTGTTTGATGGAATAACG+GGG - chr2_1:71225622-71225641 None:intergenic 30.0%
CGTTATTCCATCAAACAAAA+TGG + chr2_1:71225622-71225641 Msa0222210:CDS 30.0%
TATTCCATCAAACAAAATGG+TGG + chr2_1:71225625-71225644 Msa0222210:CDS 30.0%
AGAACACAATGATAGAAAGA+CGG - chr2_1:71225801-71225820 None:intergenic 30.0%
TACCCATAATATTTGTACCA+CGG + chr2_1:71226020-71226039 Msa0222210:CDS 30.0%
AAAATACCAGTTCATGCATT+TGG + chr2_1:71226111-71226130 Msa0222210:CDS 30.0%
! ATTTTCCTTTATTGAAGCTG+AGG + chr2_1:71226194-71226213 Msa0222210:CDS 30.0%
! TTTTCCTTTATTGAAGCTGA+GGG + chr2_1:71226195-71226214 Msa0222210:CDS 30.0%
AAGATCTACATGTAGAAGTT+CGG + chr2_1:71226274-71226293 Msa0222210:CDS 30.0%
CATTGTTAGTCAATGTACTT+TGG - chr2_1:71226347-71226366 None:intergenic 30.0%
ATTGACTAACAATGCAAGAA+TGG + chr2_1:71226353-71226372 Msa0222210:CDS 30.0%
CTGTATCAATAGAAGTAGAT+AGG + chr2_1:71226577-71226596 Msa0222210:CDS 30.0%
GAAGAAAGAGATGGTAGTAA+TGG - chr2_1:71222316-71222335 None:intergenic 35.0%
GAAAATGGTTGAAAAAGCGA+CGG - chr2_1:71222338-71222357 None:intergenic 35.0%
! CAACCATTTTCGTAGCAAAA+TGG + chr2_1:71222347-71222366 Msa0222210:exon 35.0%
!! CTCTTCATTTTTCACTGCTT+AGG + chr2_1:71222602-71222621 Msa0222210:intron 35.0%
GTGATTGTGATGTGTTGTAT+TGG + chr2_1:71222817-71222836 Msa0222210:intron 35.0%
! CATTATTCATTTTATGGCGG+TGG + chr2_1:71222843-71222862 Msa0222210:intron 35.0%
TATACACAGACAGTGTACTA+TGG - chr2_1:71223131-71223150 None:intergenic 35.0%
CACAAGTTCAGGAACTAAAA+TGG - chr2_1:71223356-71223375 None:intergenic 35.0%
ATGTGAGACACTATCATTAC+AGG - chr2_1:71223502-71223521 None:intergenic 35.0%
GATAGTGTCTCACATATTCA+AGG + chr2_1:71223507-71223526 Msa0222210:intron 35.0%
TTGCTTGCCCAAATGAAATA+TGG + chr2_1:71223540-71223559 Msa0222210:intron 35.0%
TGTAATAGAGTGGAAGAGAT+TGG + chr2_1:71223569-71223588 Msa0222210:intron 35.0%
TGATTGGAAAATTGGAATGG+AGG + chr2_1:71223608-71223627 Msa0222210:intron 35.0%
CACCTTTACTTTGCTGAAAA+TGG + chr2_1:71223821-71223840 Msa0222210:intron 35.0%
! CATACATATTGATGGCATCA+AGG - chr2_1:71223870-71223889 None:intergenic 35.0%
! TTGGTGGTCATACATATTGA+TGG - chr2_1:71223878-71223897 None:intergenic 35.0%
!!! TTCCATCCTTTTTTATGCAC+TGG + chr2_1:71224120-71224139 Msa0222210:intron 35.0%
AACCAGTGCATAAAAAAGGA+TGG - chr2_1:71224125-71224144 None:intergenic 35.0%
TACTTAATTGCTCAGCTTCA+CGG + chr2_1:71224237-71224256 Msa0222210:intron 35.0%
!! GGCACCAAACTTTTAAAAGA+AGG - chr2_1:71224363-71224382 None:intergenic 35.0%
!!! CTTTTAAAAGTTTGGTGCCT+TGG + chr2_1:71224364-71224383 Msa0222210:intron 35.0%
!! TAATGTAGATGGTGGATTGA+TGG + chr2_1:71224388-71224407 Msa0222210:intron 35.0%
ATATGTCACACATGACTTCA+TGG - chr2_1:71224422-71224441 None:intergenic 35.0%
AAACATGACTTCATGGATAG+TGG - chr2_1:71224591-71224610 None:intergenic 35.0%
AGATGTCAAACATGACTTCA+TGG - chr2_1:71224598-71224617 None:intergenic 35.0%
ATAATTGAAAAAAGGGGGAG+GGG - chr2_1:71224750-71224769 None:intergenic 35.0%
CATAATTGAAAAAAGGGGGA+GGG - chr2_1:71224751-71224770 None:intergenic 35.0%
TCATAATTGAAAAAAGGGGG+AGG - chr2_1:71224752-71224771 None:intergenic 35.0%
!!! CCCCTTTTTTCAATTATGAC+TGG + chr2_1:71224753-71224772 Msa0222210:intron 35.0%
GGCCAGTCATAATTGAAAAA+AGG - chr2_1:71224758-71224777 None:intergenic 35.0%
! CGGGTTAGATTATATCAACA+TGG + chr2_1:71224866-71224885 Msa0222210:intron 35.0%
TAGATGTGATGCATTGGAAA+TGG - chr2_1:71225207-71225226 None:intergenic 35.0%
! TTTGAAACAGCTGAAACTTC+AGG - chr2_1:71225553-71225572 None:intergenic 35.0%
ATTGCGTGTAATTAACGCTT+TGG + chr2_1:71225882-71225901 Msa0222210:CDS 35.0%
! ATTAACGCTTTGGTTCCAAA+TGG + chr2_1:71225892-71225911 Msa0222210:CDS 35.0%
ATTGCTGAAGGATTGAAGAA+AGG + chr2_1:71225925-71225944 Msa0222210:CDS 35.0%
TTGCTGAAGGATTGAAGAAA+GGG + chr2_1:71225926-71225945 Msa0222210:CDS 35.0%
GGTATCATGTTACTAACTGA+TGG + chr2_1:71225991-71226010 Msa0222210:CDS 35.0%
AGCCGTGGTACAAATATTAT+GGG - chr2_1:71226025-71226044 None:intergenic 35.0%
TTAGTACGATGAATGGAGTT+CGG - chr2_1:71226078-71226097 None:intergenic 35.0%
AACTCCATTCATCGTACTAA+CGG + chr2_1:71226078-71226097 Msa0222210:CDS 35.0%
CAACTTAGTTCAGTAAAAGC+AGG + chr2_1:71226315-71226334 Msa0222210:CDS 35.0%
TGCAAGAATGGCTTCTATAA+AGG + chr2_1:71226365-71226384 Msa0222210:CDS 35.0%
AGAATGGCTTCTATAAAGGT+AGG + chr2_1:71226369-71226388 Msa0222210:CDS 35.0%
TCATCACTAGATTTCTCAAC+TGG - chr2_1:71226444-71226463 None:intergenic 35.0%
!! AAACCCTCCATTTTTGTGAT+GGG - chr2_1:71226504-71226523 None:intergenic 35.0%
CAATAGAAGTAGATAGGCAA+AGG + chr2_1:71226583-71226602 Msa0222210:CDS 35.0%
TGTCCTAGAAAGATGTCAAA+GGG + chr2_1:71226683-71226702 Msa0222210:CDS 35.0%
!! AGAAGTACATAATGGATCAC+CGG - chr2_1:71226736-71226755 None:intergenic 35.0%
! GCAGAAAGAGAAGTACATAA+TGG - chr2_1:71226744-71226763 None:intergenic 35.0%
TTCTCTTTCTGCTGAACTAA+AGG + chr2_1:71226752-71226771 Msa0222210:CDS 35.0%
CTACTAAATCCTTTAGTGGT+CGG + chr2_1:71227003-71227022 Msa0222210:CDS 35.0%
! CGAAAACTCAAACTTGCTCT+TGG + chr2_1:71222381-71222400 Msa0222210:CDS 40.0%
!!! GGTTTTGGGAAGATGAATAC+AGG - chr2_1:71222418-71222437 None:intergenic 40.0%
GATGAAAATGCAAACCTTGG+AGG - chr2_1:71222568-71222587 None:intergenic 40.0%
! TATTCATTTTATGGCGGTGG+TGG + chr2_1:71222846-71222865 Msa0222210:intron 40.0%
!! TTTGAGGAGTGTTGATCCTA+TGG + chr2_1:71223167-71223186 Msa0222210:intron 40.0%
AAAATGACACTGTTTGCAGC+TGG - chr2_1:71223232-71223251 None:intergenic 40.0%
TCTCAATGTCTCACAAGTTC+AGG - chr2_1:71223367-71223386 None:intergenic 40.0%
AGGGATTTGATGAAGTGGAA+TGG - chr2_1:71223646-71223665 None:intergenic 40.0%
TGGAAAGGGATTTGATGAAG+TGG - chr2_1:71223651-71223670 None:intergenic 40.0%
GAAAAAAAGTCAGCGTTTGG+TGG - chr2_1:71223894-71223913 None:intergenic 40.0%
! GTAATAGGGATGGGTGTTTT+TGG + chr2_1:71223981-71224000 Msa0222210:intron 40.0%
!!! TTATGCACTGGTTTTTGTGG+TGG + chr2_1:71224132-71224151 Msa0222210:intron 40.0%
TCCACCATCTACATTAACCA+AGG - chr2_1:71224384-71224403 None:intergenic 40.0%
CACATGACTTCATGGAATAG+TGG - chr2_1:71224414-71224433 None:intergenic 40.0%
CTAAGGAAAGGAATGCTCTA+CGG + chr2_1:71224846-71224865 Msa0222210:intron 40.0%
TAAGGAAAGGAATGCTCTAC+GGG + chr2_1:71224847-71224866 Msa0222210:intron 40.0%
TGTCCTTTACGTTAGCACTT+CGG + chr2_1:71225055-71225074 Msa0222210:intron 40.0%
TGCTTGAATGCAATGAAACC+AGG + chr2_1:71225139-71225158 Msa0222210:CDS 40.0%
GCTTGAATGCAATGAAACCA+GGG + chr2_1:71225140-71225159 Msa0222210:CDS 40.0%
! TCCATTTTGCTCTGCAAACA+GGG - chr2_1:71225255-71225274 None:intergenic 40.0%
! TTCCATTTTGCTCTGCAAAC+AGG - chr2_1:71225256-71225275 None:intergenic 40.0%
TCTTGGTTGAGAGATGTCAT+GGG - chr2_1:71225314-71225333 None:intergenic 40.0%
TCATCGTCGTCAAAGATAGT+TGG - chr2_1:71225442-71225461 None:intergenic 40.0%
!! GTCACAGTTCTAGACATAAG+TGG + chr2_1:71225700-71225719 Msa0222210:CDS 40.0%
AATGATAGAAAGACGGTCTG+AGG - chr2_1:71225794-71225813 None:intergenic 40.0%
TGCTGAAGGATTGAAGAAAG+GGG + chr2_1:71225927-71225946 Msa0222210:CDS 40.0%
AGGATTGAAGAAAGGGGTTA+AGG + chr2_1:71225933-71225952 Msa0222210:CDS 40.0%
CAGCCGTGGTACAAATATTA+TGG - chr2_1:71226026-71226045 None:intergenic 40.0%
CATAATATTTGTACCACGGC+TGG + chr2_1:71226024-71226043 Msa0222210:CDS 40.0%
CCAAAACCAAATGCATGAAC+TGG - chr2_1:71226120-71226139 None:intergenic 40.0%
!! CCAGTTCATGCATTTGGTTT+TGG + chr2_1:71226117-71226136 Msa0222210:CDS 40.0%
!! CATTCCATCTCTGAGATTTC+TGG + chr2_1:71226165-71226184 Msa0222210:CDS 40.0%
TATTGGGGGACTATTAAGTG+TGG + chr2_1:71226245-71226264 Msa0222210:CDS 40.0%
TAGTGACCCCATCACAAAAA+TGG + chr2_1:71226494-71226513 Msa0222210:CDS 40.0%
!! AACCCTCCATTTTTGTGATG+GGG - chr2_1:71226503-71226522 None:intergenic 40.0%
!! CAAACCCTCCATTTTTGTGA+TGG - chr2_1:71226505-71226524 None:intergenic 40.0%
CATCACAAAAATGGAGGGTT+TGG + chr2_1:71226503-71226522 Msa0222210:CDS 40.0%
GAAGATTCAGAGACCTAATG+TGG + chr2_1:71226542-71226561 Msa0222210:CDS 40.0%
GAATAGACTTCAAGCTACTG+AGG + chr2_1:71226605-71226624 Msa0222210:CDS 40.0%
CTGTCCTAGAAAGATGTCAA+AGG + chr2_1:71226682-71226701 Msa0222210:CDS 40.0%
ATGCCCTTTGACATCTTTCT+AGG - chr2_1:71226689-71226708 None:intergenic 40.0%
!! GAAACTATTTCTGCTCAAGC+CGG + chr2_1:71226714-71226733 Msa0222210:CDS 40.0%
CGACGTGTTTATGAAGAATC+TGG + chr2_1:71226798-71226817 Msa0222210:CDS 40.0%
GGAAGAGCTTATGTACTATC+AGG + chr2_1:71226819-71226838 Msa0222210:CDS 40.0%
TCAGGAATGAGCTCTCATTT+AGG + chr2_1:71226837-71226856 Msa0222210:CDS 40.0%
CAGGAATGAGCTCTCATTTA+GGG + chr2_1:71226838-71226857 Msa0222210:CDS 40.0%
CGACCTACTAAATCCTTTAG+TGG + chr2_1:71226999-71227018 Msa0222210:CDS 40.0%
CGACCACTAAAGGATTTAGT+AGG - chr2_1:71227005-71227024 None:intergenic 40.0%
TAATGGCCCACAATAGTCAC+GGG - chr2_1:71222299-71222318 None:intergenic 45.0%
GTAATGGCCCACAATAGTCA+CGG - chr2_1:71222300-71222319 None:intergenic 45.0%
AAAGCGACGGAAGAAAGAGA+TGG - chr2_1:71222325-71222344 None:intergenic 45.0%
!! GAAGGTTGATCGGAGGTTTT+GGG - chr2_1:71222432-71222451 None:intergenic 45.0%
!! AGAAGGTTGATCGGAGGTTT+TGG - chr2_1:71222433-71222452 None:intergenic 45.0%
! GATGGAGGAAGAAGGTTGAT+CGG - chr2_1:71222442-71222461 None:intergenic 45.0%
GGTGCCTTGGTTAATGTAGA+TGG + chr2_1:71224377-71224396 Msa0222210:intron 45.0%
GCCTTGGTTAATGTAGATGG+TGG + chr2_1:71224380-71224399 Msa0222210:intron 45.0%
GTCCTTTACGTTAGCACTTC+GGG + chr2_1:71225056-71225075 Msa0222210:intron 45.0%
! AACCCGAAGTGCTAACGTAA+AGG - chr2_1:71225061-71225080 None:intergenic 45.0%
AATGCAATGAAACCAGGGCA+GGG + chr2_1:71225145-71225164 Msa0222210:CDS 45.0%
AGAGATGTCATGGGACACAT+TGG - chr2_1:71225305-71225324 None:intergenic 45.0%
CTCTTGGTTGAGAGATGTCA+TGG - chr2_1:71225315-71225334 None:intergenic 45.0%
CATGACATCTCTCAACCAAG+AGG + chr2_1:71225313-71225332 Msa0222210:CDS 45.0%
TCTTCGTAGTATACCTGACC+AGG - chr2_1:71225344-71225363 None:intergenic 45.0%
TGACGACGATGATGAAGTCT+TGG + chr2_1:71225450-71225469 Msa0222210:CDS 45.0%
!! CCTGCCACCATTTTGTTTGA+TGG - chr2_1:71225632-71225651 None:intergenic 45.0%
CCATCAAACAAAATGGTGGC+AGG + chr2_1:71225629-71225648 Msa0222210:CDS 45.0%
AAGATCAACTTGAGCACGAG+AGG - chr2_1:71225680-71225699 None:intergenic 45.0%
GACATAAGTGGTAGCATGAC+TGG + chr2_1:71225712-71225731 Msa0222210:CDS 45.0%
CATCATTCATCCGTCGTAGA+GGG - chr2_1:71225846-71225865 None:intergenic 45.0%
! AACGCTTTGGTTCCAAATGG+TGG + chr2_1:71225895-71225914 Msa0222210:CDS 45.0%
GCAATGTCTGTTCCACCATT+TGG - chr2_1:71225910-71225929 None:intergenic 45.0%
! AGGTTTTTGTTGACCGTCGA+TGG + chr2_1:71225953-71225972 Msa0222210:CDS 45.0%
AGTAACATGATACCACCCAC+TGG - chr2_1:71225985-71226004 None:intergenic 45.0%
ATTTGTACCACGGCTGGTAT+TGG + chr2_1:71226030-71226049 Msa0222210:CDS 45.0%
TTCGCCGTTAGTACGATGAA+TGG - chr2_1:71226085-71226104 None:intergenic 45.0%
ATTCATCGTACTAACGGCGA+AGG + chr2_1:71226084-71226103 Msa0222210:CDS 45.0%
!! TCCATCTCTGAGATTTCTGG+AGG + chr2_1:71226168-71226187 Msa0222210:CDS 45.0%
CACTCCCTCAGCTTCAATAA+AGG - chr2_1:71226202-71226221 None:intergenic 45.0%
ATGCGTTCGCTCAGTGTATT+GGG + chr2_1:71226229-71226248 Msa0222210:CDS 45.0%
TGACCCCATCACAAAAATGG+AGG + chr2_1:71226497-71226516 Msa0222210:CDS 45.0%
GACCCCATCACAAAAATGGA+GGG + chr2_1:71226498-71226517 Msa0222210:CDS 45.0%
GCTTGATCTCTAGCCACATT+AGG - chr2_1:71226558-71226577 None:intergenic 45.0%
ACTTCAAGCTACTGAGGCAA+TGG + chr2_1:71226611-71226630 Msa0222210:CDS 45.0%
TGCTGAACTAAAGGAGATGC+AGG + chr2_1:71226761-71226780 Msa0222210:CDS 45.0%
TGTCCTCACAAGAATGGTCT+GGG - chr2_1:71226955-71226974 None:intergenic 45.0%
TTGTGGTGTCCTCACAAGAA+TGG - chr2_1:71226961-71226980 None:intergenic 45.0%
TCTTTGTTGCCGACCACTAA+AGG - chr2_1:71227015-71227034 None:intergenic 45.0%
!! AATTTATTTATCAAATTTAT+TGG + chr2_1:71223761-71223780 Msa0222210:intron 5.0%
!! TATATGATTAATAATTAAAT+TGG + chr2_1:71224330-71224349 Msa0222210:intron 5.0%
AAGAGGAGGATGAGGAGAGA+CGG - chr2_1:71222542-71222561 None:intergenic 50.0%
ATCCTCCTCTTCATCCTCCA+AGG + chr2_1:71222551-71222570 Msa0222210:CDS 50.0%
AACCTTGGAGGATGAAGAGG+AGG - chr2_1:71222556-71222575 None:intergenic 50.0%
GCAAACCTTGGAGGATGAAG+AGG - chr2_1:71222559-71222578 None:intergenic 50.0%
TGGACCTGCATCAAGACAAG+AGG + chr2_1:71224152-71224171 Msa0222210:intron 50.0%
GGACCTGCATCAAGACAAGA+GGG + chr2_1:71224153-71224172 Msa0222210:intron 50.0%
GACCTGCATCAAGACAAGAG+GGG + chr2_1:71224154-71224173 Msa0222210:intron 50.0%
GGGAGGGGAGCAATCTTATA+CGG - chr2_1:71224735-71224754 None:intergenic 50.0%
GAATGCAATGAAACCAGGGC+AGG + chr2_1:71225144-71225163 Msa0222210:CDS 50.0%
ATGCAATGAAACCAGGGCAG+GGG + chr2_1:71225146-71225165 Msa0222210:CDS 50.0%
GCCCTGTTTGCAGAGCAAAA+TGG + chr2_1:71225251-71225270 Msa0222210:CDS 50.0%
CTTTCTTCCTCGCGACAGAA+TGG + chr2_1:71225364-71225383 Msa0222210:CDS 50.0%
AACTGAACCATTCTGTCGCG+AGG - chr2_1:71225374-71225393 None:intergenic 50.0%
CGCGACAGAATGGTTCAGTT+CGG + chr2_1:71225374-71225393 Msa0222210:CDS 50.0%
GCATCATTCATCCGTCGTAG+AGG - chr2_1:71225847-71225866 None:intergenic 50.0%
GGTGGAACAGACATTGCTGA+AGG + chr2_1:71225913-71225932 Msa0222210:CDS 50.0%
CCACTGGATTCTTCCATCGA+CGG - chr2_1:71225969-71225988 None:intergenic 50.0%
CGTCGATGGAAGAATCCAGT+GGG + chr2_1:71225967-71225986 Msa0222210:CDS 50.0%
GCCTCCAGAAATCTCAGAGA+TGG - chr2_1:71226172-71226191 None:intergenic 50.0%
TGAAGCTGAGGGAGTGATTC+AGG + chr2_1:71226206-71226225 Msa0222210:CDS 50.0%
GATGCGTTCGCTCAGTGTAT+TGG + chr2_1:71226228-71226247 Msa0222210:CDS 50.0%
TGCGTTCGCTCAGTGTATTG+GGG + chr2_1:71226230-71226249 Msa0222210:CDS 50.0%
TGGGGGACTATTAAGTGTGG+TGG + chr2_1:71226248-71226267 Msa0222210:CDS 50.0%
TGCGTACCAAACTCCTTCCA+TGG + chr2_1:71226911-71226930 Msa0222210:CDS 50.0%
TGTCAGCCATGGAAGGAGTT+TGG - chr2_1:71226920-71226939 None:intergenic 50.0%
AACTCCTTCCATGGCTGACA+TGG + chr2_1:71226920-71226939 Msa0222210:CDS 50.0%
GAAACCATGTCAGCCATGGA+AGG - chr2_1:71226927-71226946 None:intergenic 50.0%
ACGTGAAACCATGTCAGCCA+TGG - chr2_1:71226931-71226950 None:intergenic 50.0%
GTTCCCAGACCATTCTTGTG+AGG + chr2_1:71226949-71226968 Msa0222210:CDS 50.0%
GTGTCCTCACAAGAATGGTC+TGG - chr2_1:71226956-71226975 None:intergenic 50.0%
CACAATAGTCACGGGAGGGA+GGG - chr2_1:71222291-71222310 None:intergenic 55.0%
CTCCCTCCCGTGACTATTGT+GGG + chr2_1:71222290-71222309 Msa0222210:five_prime_UTR 55.0%
! GGAGGAAGAAGGTTGATCGG+AGG - chr2_1:71222439-71222458 None:intergenic 55.0%
CGATCGGAGATGGAGGAAGA+AGG - chr2_1:71222450-71222469 None:intergenic 55.0%
TGAGAGACGATCGGAGATGG+AGG - chr2_1:71222457-71222476 None:intergenic 55.0%
GGATGAGAGACGATCGGAGA+TGG - chr2_1:71222460-71222479 None:intergenic 55.0%
!! AAGGTGTCGGAGTAGAGGGA+CGG - chr2_1:71222506-71222525 None:intergenic 55.0%
!! GAGGAAGGTGTCGGAGTAGA+GGG - chr2_1:71222510-71222529 None:intergenic 55.0%
GGAGGATGAAGAGGAGGATG+AGG - chr2_1:71222550-71222569 None:intergenic 55.0%
CACCCCTCTTGTCTTGATGC+AGG - chr2_1:71224159-71224178 None:intergenic 55.0%
CTGCATCAAGACAAGAGGGG+TGG + chr2_1:71224157-71224176 Msa0222210:intron 55.0%
CTCAACCAAGAGGTGACACC+TGG + chr2_1:71225323-71225342 Msa0222210:CDS 55.0%
GCACGAGAGGTCTCAACTGA+AGG - chr2_1:71225667-71225686 None:intergenic 55.0%
TCGTAGAGGGAAGATGCGAC+GGG - chr2_1:71225833-71225852 None:intergenic 55.0%
GTCGTAGAGGGAAGATGCGA+CGG - chr2_1:71225834-71225853 None:intergenic 55.0%
GTCGCATCTTCCCTCTACGA+CGG + chr2_1:71225833-71225852 Msa0222210:CDS 55.0%
CCGTCGATGGAAGAATCCAG+TGG + chr2_1:71225966-71225985 Msa0222210:CDS 55.0%
CGATGGAAGAATCCAGTGGG+TGG + chr2_1:71225970-71225989 Msa0222210:CDS 55.0%
! ACCACGGCTGGTATTGGAGA+AGG + chr2_1:71226036-71226055 Msa0222210:CDS 55.0%
ACCTTCTCCAATACCAGCCG+TGG - chr2_1:71226040-71226059 None:intergenic 55.0%
GCGTTCGCTCAGTGTATTGG+GGG + chr2_1:71226231-71226250 Msa0222210:CDS 55.0%
AGCTACTGAGGCAATGGCTG+AGG + chr2_1:71226617-71226636 Msa0222210:CDS 55.0%
GCTAGAGTCGAAGCAGAACG+TGG + chr2_1:71226639-71226658 Msa0222210:CDS 55.0%
GGGCAAAGAGCAACTGCAAG+AGG + chr2_1:71226858-71226877 Msa0222210:CDS 55.0%
CACAAAGCTGGTGGAGTCTG+TGG - chr2_1:71226889-71226908 None:intergenic 55.0%
TTGGTACGCACGCACAAAGC+TGG - chr2_1:71226901-71226920 None:intergenic 55.0%
ATAGTCACGGGAGGGAGGGA+GGG - chr2_1:71222287-71222306 None:intergenic 60.0%
AATAGTCACGGGAGGGAGGG+AGG - chr2_1:71222288-71222307 None:intergenic 60.0%
CCACAATAGTCACGGGAGGG+AGG - chr2_1:71222292-71222311 None:intergenic 60.0%
CCTCCCTCCCGTGACTATTG+TGG + chr2_1:71222289-71222308 Msa0222210:five_prime_UTR 60.0%
GGCCCACAATAGTCACGGGA+GGG - chr2_1:71222295-71222314 None:intergenic 60.0%
TGGCCCACAATAGTCACGGG+AGG - chr2_1:71222296-71222315 None:intergenic 60.0%
GGAGGCGGATGAGAGACGAT+CGG - chr2_1:71222466-71222485 None:intergenic 60.0%
GATCGTCTCTCATCCGCCTC+CGG + chr2_1:71222465-71222484 Msa0222210:CDS 60.0%
!! GGAGGAAGGTGTCGGAGTAG+AGG - chr2_1:71222511-71222530 None:intergenic 60.0%
ACTCCGACACCTTCCTCCTC+CGG + chr2_1:71222513-71222532 Msa0222210:CDS 60.0%
! AGACCGGAGGAGGAAGGTGT+CGG - chr2_1:71222519-71222538 None:intergenic 60.0%
GGATGAGGAGAGACGGAGAC+CGG - chr2_1:71222535-71222554 None:intergenic 60.0%
AATGAAACCAGGGCAGGGGC+AGG + chr2_1:71225150-71225169 Msa0222210:CDS 60.0%
! CCTGACCAGGTGTCACCTCT+TGG - chr2_1:71225331-71225350 None:intergenic 60.0%
CCAAGAGGTGACACCTGGTC+AGG + chr2_1:71225328-71225347 Msa0222210:CDS 60.0%
GAATGATGCTGCGCGACAGC+AGG + chr2_1:71225858-71225877 Msa0222210:CDS 60.0%
GTACGCACGCACAAAGCTGG+TGG - chr2_1:71226898-71226917 None:intergenic 60.0%
!! TCCGCCTCCGGTGCTGTTTC+CGG + chr2_1:71222477-71222496 Msa0222210:CDS 65.0%
! ACCGGAAACAGCACCGGAGG+CGG - chr2_1:71222481-71222500 None:intergenic 65.0%
ACGGCGACCGGAAACAGCAC+CGG - chr2_1:71222487-71222506 None:intergenic 65.0%
AGACGGAGACCGGAGGAGGA+AGG - chr2_1:71222525-71222544 None:intergenic 65.0%
TGAGGAGAGACGGAGACCGG+AGG - chr2_1:71222532-71222551 None:intergenic 65.0%
AAAATGGCCTGCCCCTGCCC+TGG - chr2_1:71225160-71225179 None:intergenic 65.0%
! GCGACCGGAAACAGCACCGG+AGG - chr2_1:71222484-71222503 None:intergenic 70.0%
CGGAGTAGAGGGACGGCGAC+CGG - chr2_1:71222499-71222518 None:intergenic 70.0%
GGAGAGACGGAGACCGGAGG+AGG - chr2_1:71222529-71222548 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 71222216 71227040 71222216 ID=Msa0222210;Name=Msa0222210
chr2_1 mRNA 71222216 71227040 71222216 ID=Msa0222210-mRNA-1;Parent=Msa0222210;Name=Msa0222210-mRNA-1;_AED=0.01;_eAED=0.01;_QI=150|1|0.5|1|1|1|2|0|707
chr2_1 exon 71222216 71222572 71222216 ID=Msa0222210-mRNA-1:exon:20472;Parent=Msa0222210-mRNA-1
chr2_1 exon 71225124 71227040 71225124 ID=Msa0222210-mRNA-1:exon:20473;Parent=Msa0222210-mRNA-1
chr2_1 five_prime_UTR 71222216 71222365 71222216 ID=Msa0222210-mRNA-1:five_prime_utr;Parent=Msa0222210-mRNA-1
chr2_1 CDS 71222366 71222572 71222366 ID=Msa0222210-mRNA-1:cds;Parent=Msa0222210-mRNA-1
chr2_1 CDS 71225124 71227040 71225124 ID=Msa0222210-mRNA-1:cds;Parent=Msa0222210-mRNA-1
Gene Sequence

>Msa0222210

ATGGAATCTAAATGGCGAAAACTCAAACTTGCTCTTGGCTTCAAAAAAACCTGTATTCATCTTCCCAAAACCTCCGATCAACCTTCTTCCTCCATCTCCGATCGTCTCTCATCCGCCTCCGGTGCTGTTTCCGGTCGCCGTCCCTCTACTCCGACACCTTCCTCCTCCGGTCTCCGTCTCTCCTCATCCTCCTCTTCATCCTCCAAGGGAACGTGTGCCATATGCTTGAATGCAATGAAACCAGGGCAGGGGCAGGCCATTTTTACTGCAGAATGTTCTCACTCTTTCCATTTCCAATGCATCACATCTAATGTAAGATATGGGAATCAGATTTGCCCTGTTTGCAGAGCAAAATGGAAAGAAGTTCCTTTTCAAAATACTGCATCCAATGTGTCCCATGACATCTCTCAACCAAGAGGTGACACCTGGTCAGGTATACTACGAAGACTTTCTTCCTCGCGACAGAATGGTTCAGTTCGGCAGAGTTCGTCACGTCTTAATCATAGTCATAATATAACAGAACCAACTATCTTTGACGACGATGATGAAGTCTTGGATCAACAAACTTCAATTACTCATCATGTTAATGATGTTGATCATAGCATAGAAAATAGAATGGAGATCACAACATATCCTGAAGTTTCAGCTGTTTCAAAATCAGACTCTCAGAATAACTTTACTGTATTGGTTCATCTTAAGGCTCCCCGTTATTCCATCAAACAAAATGGTGGCAGGAGCAATGTTGAACCTTCAGTTGAGACCTCTCGTGCTCAAGTTGATCTTGTCACAGTTCTAGACATAAGTGGTAGCATGACTGGTTCAAAGATTGCATTACTGAAACAAGCTATGAGTTTTGTCATACAAAATCTGAGTTCCTCAGACCGTCTTTCTATCATTGTGTTCTCATCAACAGCCCGTCGCATCTTCCCTCTACGACGGATGAATGATGCTGCGCGACAGCAGGCATTGCGTGTAATTAACGCTTTGGTTCCAAATGGTGGAACAGACATTGCTGAAGGATTGAAGAAAGGGGTTAAGGTTTTTGTTGACCGTCGATGGAAGAATCCAGTGGGTGGTATCATGTTACTAACTGATGGACAAGATACCCATAATATTTGTACCACGGCTGGTATTGGAGAAGGTTATCATTCACTTGTTCCGAACTCCATTCATCGTACTAACGGCGAAGGTTTGAAAATACCAGTTCATGCATTTGGTTTTGGTGTTGATCATGATGCTACTTTGATGCATTCCATCTCTGAGATTTCTGGAGGCACATTTTCCTTTATTGAAGCTGAGGGAGTGATTCAGGATGCGTTCGCTCAGTGTATTGGGGGACTATTAAGTGTGGTGGTTCAAGATCTACATGTAGAAGTTCGGTGTGCTCAGTCTCGTTTGCAACTTAGTTCAGTAAAAGCAGGAAGTTACCAAAGTACATTGACTAACAATGCAAGAATGGCTTCTATAAAGGTAGGAGATTTGTATGCTGAAGAAGAAAGAGACTTTTTAGTGACACTCAATATTCCAGTTGAGAAATCTAGTGATGAGATGTCATTGTTGATCATTACATGTGTTTATAGTGACCCCATCACAAAAATGGAGGGTTTGGATGTAACAAGTGAAGTGAAGATTCAGAGACCTAATGTGGCTAGAGATCAAGCTGTATCAATAGAAGTAGATAGGCAAAGGAATAGACTTCAAGCTACTGAGGCAATGGCTGAGGCTAGAGTCGAAGCAGAACGTGGTGATTTCACTGCTGCAATTTCTGTCCTAGAAAGATGTCAAAGGGCATTATCTGAAACTATTTCTGCTCAAGCCGGTGATCCATTATGTACTTCTCTTTCTGCTGAACTAAAGGAGATGCAGGATAGAATGACAACTCGACGTGTTTATGAAGAATCTGGAAGAGCTTATGTACTATCAGGAATGAGCTCTCATTTAGGGCAAAGAGCAACTGCAAGAGGTGATTCCACAGACTCCACCAGCTTTGTGCGTGCGTACCAAACTCCTTCCATGGCTGACATGGTTTCACGTTCCCAGACCATTCTTGTGAGGACACCACAATCATCTGAAAATATTCTACGACCTACTAAATCCTTTAGTGGTCGGCAACAAAGAAAATAA

Protein sequence

>Msa0222210

MESKWRKLKLALGFKKTCIHLPKTSDQPSSSISDRLSSASGAVSGRRPSTPTPSSSGLRLSSSSSSSSKGTCAICLNAMKPGQGQAIFTAECSHSFHFQCITSNVRYGNQICPVCRAKWKEVPFQNTASNVSHDISQPRGDTWSGILRRLSSSRQNGSVRQSSSRLNHSHNITEPTIFDDDDEVLDQQTSITHHVNDVDHSIENRMEITTYPEVSAVSKSDSQNNFTVLVHLKAPRYSIKQNGGRSNVEPSVETSRAQVDLVTVLDISGSMTGSKIALLKQAMSFVIQNLSSSDRLSIIVFSSTARRIFPLRRMNDAARQQALRVINALVPNGGTDIAEGLKKGVKVFVDRRWKNPVGGIMLLTDGQDTHNICTTAGIGEGYHSLVPNSIHRTNGEGLKIPVHAFGFGVDHDATLMHSISEISGGTFSFIEAEGVIQDAFAQCIGGLLSVVVQDLHVEVRCAQSRLQLSSVKAGSYQSTLTNNARMASIKVGDLYAEEERDFLVTLNIPVEKSSDEMSLLIITCVYSDPITKMEGLDVTSEVKIQRPNVARDQAVSIEVDRQRNRLQATEAMAEARVEAERGDFTAAISVLERCQRALSETISAQAGDPLCTSLSAELKEMQDRMTTRRVYEESGRAYVLSGMSSHLGQRATARGDSTDSTSFVRAYQTPSMADMVSRSQTILVRTPQSSENILRPTKSFSGRQQRK*