Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232800 | XP_003593351.1 | 96.503 | 429 | 15 | 0 | 1 | 429 | 1 | 429 | 0.0 | 852 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232800 | sp|Q9ZQR4|Y2452_ARATH | 76.168 | 428 | 96 | 2 | 1 | 428 | 1 | 422 | 0.0 | 659 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232800 | G7IFC4 | 96.503 | 429 | 15 | 0 | 1 | 429 | 1 | 429 | 0.0 | 852 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0190600 | Msa0232800 | 0.927668 | 8.523079e-92 | -8.615850e-47 |
| Msa0232800 | Msa0272310 | 0.949186 | 2.116561e-107 | -8.615850e-47 |
| Msa0232800 | Msa0311370 | 0.900058 | 1.070268e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232800 | MtrunA17_Chr2g0280251 | 96.503 | 429 | 15 | 0 | 1 | 429 | 1 | 429 | 0.0 | 852 |
| Msa0232800 | MtrunA17_Chr4g0049251 | 82.558 | 430 | 69 | 3 | 1 | 429 | 1 | 425 | 0.0 | 718 |
| Msa0232800 | MtrunA17_Chr3g0141551 | 55.972 | 427 | 186 | 1 | 1 | 425 | 1 | 427 | 3.16e-164 | 471 |
| Msa0232800 | MtrunA17_Chr4g0065751 | 55.797 | 414 | 167 | 6 | 16 | 427 | 39 | 438 | 2.93e-149 | 433 |
| Msa0232800 | MtrunA17_Chr6g0467811 | 54.745 | 411 | 156 | 5 | 18 | 427 | 37 | 418 | 4.00e-145 | 421 |
| Msa0232800 | MtrunA17_Chr6g0469911 | 48.372 | 430 | 196 | 4 | 6 | 427 | 28 | 439 | 6.84e-133 | 391 |
| Msa0232800 | MtrunA17_Chr7g0259621 | 50.000 | 422 | 187 | 7 | 12 | 423 | 35 | 442 | 1.76e-132 | 389 |
| Msa0232800 | MtrunA17_Chr6g0469771 | 56.475 | 278 | 121 | 0 | 4 | 281 | 5 | 282 | 6.35e-113 | 332 |
| Msa0232800 | MtrunA17_Chr7g0217521 | 54.789 | 261 | 117 | 1 | 21 | 281 | 44 | 303 | 8.41e-96 | 290 |
| Msa0232800 | MtrunA17_Chr7g0217531 | 36.842 | 152 | 66 | 7 | 279 | 423 | 4 | 132 | 1.89e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232800 | AT2G14520.4 | 76.168 | 428 | 96 | 2 | 1 | 428 | 1 | 422 | 0.0 | 659 |
| Msa0232800 | AT2G14520.1 | 76.168 | 428 | 96 | 2 | 1 | 428 | 1 | 422 | 0.0 | 659 |
| Msa0232800 | AT4G33700.1 | 76.047 | 430 | 96 | 3 | 1 | 429 | 1 | 424 | 0.0 | 657 |
| Msa0232800 | AT2G14520.2 | 75.701 | 428 | 92 | 3 | 1 | 428 | 1 | 416 | 0.0 | 648 |
| Msa0232800 | AT4G33700.3 | 74.640 | 347 | 81 | 3 | 84 | 429 | 1 | 341 | 0.0 | 521 |
| Msa0232800 | AT2G14520.3 | 73.623 | 345 | 85 | 2 | 84 | 428 | 1 | 339 | 0.0 | 513 |
| Msa0232800 | AT4G33700.2 | 83.986 | 281 | 45 | 0 | 1 | 281 | 1 | 281 | 4.13e-173 | 486 |
| Msa0232800 | AT1G47330.1 | 55.079 | 443 | 177 | 4 | 1 | 425 | 1 | 439 | 3.45e-164 | 473 |
| Msa0232800 | AT5G52790.4 | 56.295 | 421 | 148 | 5 | 7 | 427 | 8 | 392 | 2.63e-157 | 451 |
| Msa0232800 | AT5G52790.1 | 56.295 | 421 | 148 | 5 | 7 | 427 | 8 | 392 | 2.22e-156 | 452 |
| Msa0232800 | AT5G52790.3 | 55.990 | 409 | 144 | 5 | 7 | 415 | 8 | 380 | 7.23e-151 | 434 |
| Msa0232800 | AT5G52790.2 | 55.990 | 409 | 144 | 5 | 7 | 415 | 8 | 380 | 7.23e-151 | 434 |
| Msa0232800 | AT5G52790.5 | 55.854 | 410 | 145 | 5 | 7 | 416 | 8 | 381 | 1.37e-150 | 435 |
| Msa0232800 | AT4G14240.1 | 50.585 | 427 | 172 | 4 | 11 | 427 | 34 | 431 | 8.46e-137 | 401 |
| Msa0232800 | AT4G14230.1 | 49.880 | 417 | 192 | 3 | 11 | 427 | 33 | 432 | 1.29e-136 | 401 |
| Msa0232800 | AT1G03270.1 | 50.575 | 435 | 186 | 8 | 2 | 427 | 23 | 437 | 9.51e-136 | 399 |
| Msa0232800 | AT4G14240.2 | 49.415 | 427 | 168 | 5 | 11 | 427 | 34 | 422 | 2.11e-129 | 382 |
| Msa0232800 | AT1G47330.2 | 52.355 | 361 | 150 | 4 | 83 | 425 | 2 | 358 | 1.41e-122 | 363 |
| Msa0232800 | AT4G14240.3 | 48.732 | 355 | 143 | 4 | 83 | 427 | 2 | 327 | 5.28e-105 | 317 |
| Msa0232800 | AT1G55930.1 | 27.843 | 255 | 154 | 10 | 72 | 312 | 221 | 459 | 1.55e-14 | 76.3 |
| Msa0232800 | AT1G55930.2 | 28.063 | 253 | 152 | 10 | 74 | 312 | 223 | 459 | 2.60e-14 | 75.5 |
Find 102 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAATTCCTATACCCTTTA+TGG | 0.055045 | 2_2:-5045555 | Msa0232800:intron |
| AAAAGCCCGGTGGTTTATTT+TGG | 0.107386 | 2_2:+5045642 | None:intergenic |
| AAATATTTACTCAGATATTT+TGG | 0.135383 | 2_2:-5043011 | Msa0232800:CDS |
| TACACTATAGTTAAATTAAT+TGG | 0.138037 | 2_2:-5042361 | Msa0232800:three_prime_UTR |
| ATAGAAAATATTTCATTTAT+AGG | 0.159362 | 2_2:+5044166 | None:intergenic |
| TCGTACAATGGCATCATTTC+TGG | 0.174270 | 2_2:+5043572 | None:intergenic |
| ATACAAATTGACAAGATATT+TGG | 0.196868 | 2_2:-5042071 | Msa0232800:three_prime_UTR |
| TTCACAGGTACTTCCTCTTC+TGG | 0.200279 | 2_2:+5043725 | None:intergenic |
| TACCCAAAATTGAAAATAAT+TGG | 0.200642 | 2_2:+5042203 | None:intergenic |
| GTTCTTCTTGTTGTCTTTGC+TGG | 0.221045 | 2_2:-5045373 | Msa0232800:CDS |
| CCATGTGACTATGGCCCTTT+TGG | 0.250589 | 2_2:+5043534 | None:intergenic |
| CAGTTGTTGGATTATTTGTT+AGG | 0.263972 | 2_2:-5044529 | Msa0232800:CDS |
| GTATCATGCACCTTGCTAAT+TGG | 0.275266 | 2_2:+5044636 | None:intergenic |
| AGAAAAGCTGTTAGGGGATT+TGG | 0.280226 | 2_2:-5042318 | Msa0232800:three_prime_UTR |
| CTTGAGGTTCTTGCTAAATC+TGG | 0.290554 | 2_2:-5045301 | Msa0232800:CDS |
| GTCTTTGCTGGATTGATGTC+AGG | 0.302857 | 2_2:-5045361 | Msa0232800:CDS |
| CCAGAGTTCAATTGCCATAA+AGG | 0.317839 | 2_2:+5045541 | None:intergenic |
| GGATTTGATGACACTAATAT+TGG | 0.318220 | 2_2:-5044014 | Msa0232800:CDS |
| GAATTAATGTCACAGAAATT+AGG | 0.319995 | 2_2:+5044873 | None:intergenic |
| TGATAGTCTTGTTGTTGCTT+GGG | 0.326445 | 2_2:-5044903 | Msa0232800:CDS |
| CTATTAGAATTACTTGCATT+TGG | 0.327515 | 2_2:+5043073 | None:intergenic |
| CGATTGTTCGTGTTCTTGTA+TGG | 0.327846 | 2_2:-5044680 | Msa0232800:CDS |
| TAGGGGATTTGGTGTGTGAT+TGG | 0.345033 | 2_2:-5042307 | Msa0232800:three_prime_UTR |
| ATATTGATACGTAATACATT+TGG | 0.350119 | 2_2:-5042108 | Msa0232800:three_prime_UTR |
| TTGATAGTCTTGTTGTTGCT+TGG | 0.351029 | 2_2:-5044904 | Msa0232800:CDS |
| TCTAACTTAGGAAAATAAAA+AGG | 0.352198 | 2_2:+5042443 | None:intergenic |
| ATATAAATTCAAAACTTGAT+AGG | 0.352636 | 2_2:-5044141 | Msa0232800:intron |
| ACTACTTTCACAAGGAATAA+TGG | 0.352863 | 2_2:+5042269 | None:intergenic |
| TTCCTCAATCAGTTTGTTCC+CGG | 0.354210 | 2_2:-5044734 | Msa0232800:CDS |
| CTTACCAGTGCAATTATTGT+TGG | 0.359911 | 2_2:+5043469 | None:intergenic |
| TCACAGGTACTTCCTCTTCT+GGG | 0.368460 | 2_2:+5043726 | None:intergenic |
| GTAGGCTCCTCATAATAAAC+AGG | 0.371973 | 2_2:+5043971 | None:intergenic |
| CAACAACAGCCATGTGACTA+TGG | 0.374690 | 2_2:+5043525 | None:intergenic |
| AGATAATCAGAAAAGCTGTT+AGG | 0.374976 | 2_2:-5042326 | Msa0232800:three_prime_UTR |
| TCCCGGTATGGTTTAACAAT+TGG | 0.379526 | 2_2:-5044717 | Msa0232800:CDS |
| TATTGATACGTAATACATTT+GGG | 0.380740 | 2_2:-5042107 | Msa0232800:three_prime_UTR |
| GATGAAACAACTATCATTGC+TGG | 0.392869 | 2_2:-5044232 | Msa0232800:CDS |
| TATCTTGTCAATTTGTATCA+TGG | 0.402381 | 2_2:+5042076 | None:intergenic |
| GATAATCAGAAAAGCTGTTA+GGG | 0.417218 | 2_2:-5042325 | Msa0232800:three_prime_UTR |
| CAATCAGTTTGTTCCCGGTA+TGG | 0.424173 | 2_2:-5044729 | Msa0232800:CDS |
| ATTCGTATACGGTGTCAATA+TGG | 0.428589 | 2_2:-5042407 | Msa0232800:three_prime_UTR |
| AGTTGTTGGATTATTTGTTA+GGG | 0.434464 | 2_2:-5044528 | Msa0232800:CDS |
| CAGAGTCCCTGTTTATTATG+AGG | 0.437038 | 2_2:-5043978 | Msa0232800:CDS |
| TTGCTAATTGGATAAGCAAC+AGG | 0.441693 | 2_2:+5044648 | None:intergenic |
| TTTCAATGGCGGTGGAGTAT+AGG | 0.447076 | 2_2:-5045435 | Msa0232800:exon |
| TGTAAATTTGCATGGTAATG+AGG | 0.449583 | 2_2:-5044461 | Msa0232800:intron |
| AGTCCATGCTCATTCGTATA+CGG | 0.451065 | 2_2:-5042418 | Msa0232800:three_prime_UTR |
| CACCAATTGTTAAACCATAC+CGG | 0.458969 | 2_2:+5044715 | None:intergenic |
| ATGACACTAATATTGGAGAA+AGG | 0.460174 | 2_2:-5044007 | Msa0232800:CDS |
| ATAAGTCCAATGATATTTGT+AGG | 0.462182 | 2_2:+5043953 | None:intergenic |
| GAGGAGCCTACAAATATCAT+TGG | 0.466806 | 2_2:-5043959 | Msa0232800:CDS |
| TATATTGAATGAGTTCCAAA+AGG | 0.469394 | 2_2:-5043549 | Msa0232800:CDS |
| TCTTTGCTGGATTGATGTCA+GGG | 0.470132 | 2_2:-5045360 | Msa0232800:CDS |
| TTTGAGCCTTGTTGATCTTG+AGG | 0.487707 | 2_2:-5045317 | Msa0232800:CDS |
| AAATATCATTGGACTTATCC+TGG | 0.490900 | 2_2:-5043948 | Msa0232800:intron |
| GATGTGAGGGTGACTATTGA+TGG | 0.492604 | 2_2:-5043163 | Msa0232800:CDS |
| CAGAGTTCAATTGCCATAAA+GGG | 0.496962 | 2_2:+5045542 | None:intergenic |
| AAAACACTTGTAAATTTGCA+TGG | 0.513123 | 2_2:-5044469 | Msa0232800:CDS |
| CTCTATGCTGCTCAAAAGCC+CGG | 0.514377 | 2_2:+5045629 | None:intergenic |
| TATTTCATTTATAGGAGTCA+TGG | 0.514676 | 2_2:+5044174 | None:intergenic |
| TGACACTAATATTGGAGAAA+GGG | 0.517648 | 2_2:-5044006 | Msa0232800:CDS |
| CCTTTATGGCAATTGAACTC+TGG | 0.517916 | 2_2:-5045541 | Msa0232800:five_prime_UTR |
| CCTCTTCTTTCTCTAACTCA+AGG | 0.522178 | 2_2:-5045516 | Msa0232800:five_prime_UTR |
| AAAATATGCTAATCAAAAGC+AGG | 0.524817 | 2_2:+5042722 | None:intergenic |
| CATACAAGAACACGAACAAT+CGG | 0.530065 | 2_2:+5044681 | None:intergenic |
| GTGAAAGTAGTAGTAGTGAT+GGG | 0.531592 | 2_2:-5042257 | Msa0232800:three_prime_UTR |
| TTGATGTCAGGGCTTACCTT+AGG | 0.539896 | 2_2:-5045349 | Msa0232800:CDS |
| ATGAAACAACTATCATTGCT+GGG | 0.540048 | 2_2:-5044231 | Msa0232800:CDS |
| AATTTGCAATGCAGCAGCCA+TGG | 0.540290 | 2_2:-5045030 | Msa0232800:CDS |
| GATAGTCTTGTTGTTGCTTG+GGG | 0.543298 | 2_2:-5044902 | Msa0232800:CDS |
| AGATTCAGTAAGAGATGTGA+GGG | 0.551940 | 2_2:-5043176 | Msa0232800:CDS |
| TACCGGGAACAAACTGATTG+AGG | 0.554385 | 2_2:+5044732 | None:intergenic |
| TGTGAAAGTAGTAGTAGTGA+TGG | 0.556665 | 2_2:-5042258 | Msa0232800:three_prime_UTR |
| ACCAATTGTTAAACCATACC+GGG | 0.557041 | 2_2:+5044716 | None:intergenic |
| AGCATGGACTCGTCTAACTT+AGG | 0.565270 | 2_2:+5042431 | None:intergenic |
| TCTTCCAACAATAATTGCAC+TGG | 0.565918 | 2_2:-5043473 | Msa0232800:intron |
| TGGTTTAACAATTGGTGCAA+CGG | 0.572976 | 2_2:-5044709 | Msa0232800:CDS |
| GAACTCTCTGAGAAGACTGC+TGG | 0.576808 | 2_2:-5044202 | Msa0232800:CDS |
| GCTCAAAGACATGAGGCCTA+AGG | 0.592029 | 2_2:+5045333 | None:intergenic |
| TGTTGCTTATCCAATTAGCA+AGG | 0.594700 | 2_2:-5044646 | Msa0232800:intron |
| ATGTGAGGGTGACTATTGAT+GGG | 0.597127 | 2_2:-5043162 | Msa0232800:CDS |
| GTTAACTATTGACCCAGAAG+AGG | 0.600350 | 2_2:-5043738 | Msa0232800:CDS |
| TAGATTCAGTAAGAGATGTG+AGG | 0.604655 | 2_2:-5043177 | Msa0232800:CDS |
| CCTTGAGTTAGAGAAAGAAG+AGG | 0.605289 | 2_2:+5045516 | None:intergenic |
| ATATTGAATGAGTTCCAAAA+GGG | 0.606565 | 2_2:-5043548 | Msa0232800:CDS |
| ACACCGTATACGAATGAGCA+TGG | 0.613239 | 2_2:+5042415 | None:intergenic |
| TGAATTTAGATGTACCTCCA+TGG | 0.622585 | 2_2:+5045013 | None:intergenic |
| AGCTGTAGGAATAATTACAA+TGG | 0.624823 | 2_2:-5042945 | Msa0232800:CDS |
| CCAAAAGGGCCATAGTCACA+TGG | 0.627635 | 2_2:-5043534 | Msa0232800:CDS |
| TGAAAGTAGTAGTAGTGATG+GGG | 0.638561 | 2_2:-5042256 | Msa0232800:three_prime_UTR |
| TCATTCAATATATCGTACAA+TGG | 0.642805 | 2_2:+5043560 | None:intergenic |
| TTTAACAATTGGTGCAACGG+TGG | 0.646196 | 2_2:-5044706 | Msa0232800:CDS |
| ATAATCAGAAAAGCTGTTAG+GGG | 0.659199 | 2_2:-5042324 | Msa0232800:three_prime_UTR |
| CAAGAACCTCAAGATCAACA+AGG | 0.659852 | 2_2:+5045311 | None:intergenic |
| CAACAAGGCTCAAAGACATG+AGG | 0.673294 | 2_2:+5045326 | None:intergenic |
| TGAAACAACTATCATTGCTG+GGG | 0.681612 | 2_2:-5044230 | Msa0232800:CDS |
| TTGCAATGCAGCAGCCATGG+AGG | 0.690241 | 2_2:-5045027 | Msa0232800:intron |
| TGACCATACGCAAAATACCA+AGG | 0.690843 | 2_2:-5043697 | Msa0232800:intron |
| TGTGAGGGTGACTATTGATG+GGG | 0.696572 | 2_2:-5043161 | Msa0232800:CDS |
| TCACTACTACTACTTTCACA+AGG | 0.700112 | 2_2:+5042261 | None:intergenic |
| TAGGCTCCTCATAATAAACA+GGG | 0.707074 | 2_2:+5043972 | None:intergenic |
| TATGCTGCTCAAAAGCCCGG+TGG | 0.741264 | 2_2:+5045632 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGAAAATATTTCATTTAT+AGG | + | chr2_2:5043561-5043580 | None:intergenic | 10.0% |
| !!! | ATTTTTTAAATTTGTAGTTA+TGG | + | chr2_2:5044110-5044129 | None:intergenic | 10.0% |
| !! | AAATTATTAAATTTATTGAC+AGG | - | chr2_2:5044126-5044145 | Msa0232800:intron | 10.0% |
| !! | AATTATTAAATTTATTGACA+GGG | - | chr2_2:5044127-5044146 | Msa0232800:intron | 10.0% |
| !! | TTATTTATTTAATTATGTGT+AGG | - | chr2_2:5044910-5044929 | Msa0232800:CDS | 10.0% |
| !! | AAAACATCAAGAATTTATTA+TGG | + | chr2_2:5042487-5042506 | None:intergenic | 15.0% |
| !!! | TTTGTGTTTTTAATTTTTTG+TGG | - | chr2_2:5042613-5042632 | Msa0232800:intron | 15.0% |
| !! | ATATAAATTCAAAACTTGAT+AGG | - | chr2_2:5043583-5043602 | Msa0232800:intron | 15.0% |
| !! | CTTAATATTATTATTAAGCA+GGG | - | chr2_2:5043689-5043708 | Msa0232800:intron | 15.0% |
| !! | AAAATTTGTAGTATCAAAAA+TGG | + | chr2_2:5043917-5043936 | None:intergenic | 15.0% |
| !!! | TGATTTTCTCAAATTTTTAA+CGG | - | chr2_2:5044382-5044401 | Msa0232800:intron | 15.0% |
| !! | TAACTTATAAAACACATATA+CGG | + | chr2_2:5044443-5044462 | None:intergenic | 15.0% |
| !!! | AAATATTTACTCAGATATTT+TGG | - | chr2_2:5044713-5044732 | Msa0232800:CDS | 15.0% |
| !!! | TAAGCAAAAAACTATTTTTT+AGG | - | chr2_2:5045070-5045089 | Msa0232800:CDS | 15.0% |
| !! | TACACTATAGTTAAATTAAT+TGG | - | chr2_2:5045363-5045382 | Msa0232800:CDS | 15.0% |
| !!! | ATCCAATTATTTTCAATTTT+GGG | - | chr2_2:5045519-5045538 | Msa0232800:five_prime_UTR | 15.0% |
| !! | TGAATATATATTCGAAATCA+CGG | + | chr2_2:5042578-5042597 | None:intergenic | 20.0% |
| !!! | ATTTATCTTTTGATTTTCTC+AGG | - | chr2_2:5042782-5042801 | Msa0232800:CDS | 20.0% |
| !!! | GTGACATTAATTCTTTTATT+TGG | - | chr2_2:5042861-5042880 | Msa0232800:intron | 20.0% |
| !!! | ATTAATTCTTTTATTTGGTG+AGG | - | chr2_2:5042866-5042885 | Msa0232800:intron | 20.0% |
| !! | GCAAGAAATTAAAATCAAAT+TGG | + | chr2_2:5043153-5043172 | None:intergenic | 20.0% |
| !!! | TTTTAACGTCAAAATCATTT+AGG | - | chr2_2:5043388-5043407 | Msa0232800:intron | 20.0% |
| !! | GCTTACAATTTATAAATCAT+TGG | + | chr2_2:5043623-5043642 | None:intergenic | 20.0% |
| !! | GCTTAATATTATTATTAAGC+AGG | - | chr2_2:5043688-5043707 | Msa0232800:intron | 20.0% |
| !!! | ATACTACAAATTTTGTATGA+TGG | - | chr2_2:5043923-5043942 | Msa0232800:intron | 20.0% |
| !!! | TACTACAAATTTTGTATGAT+GGG | - | chr2_2:5043924-5043943 | Msa0232800:intron | 20.0% |
| !!! | CAAATTCTTGATCTAAAATT+AGG | + | chr2_2:5043967-5043986 | None:intergenic | 20.0% |
| !! | TGTTACAAAATAAAATACCT+TGG | + | chr2_2:5044047-5044066 | None:intergenic | 20.0% |
| !! | TTTATTTAATTATGTGTAGG+AGG | - | chr2_2:5044913-5044932 | Msa0232800:CDS | 20.0% |
| !! | TCTAACTTAGGAAAATAAAA+AGG | + | chr2_2:5045284-5045303 | None:intergenic | 20.0% |
| !!! | CATCCAATTATTTTCAATTT+TGG | - | chr2_2:5045518-5045537 | Msa0232800:five_prime_UTR | 20.0% |
| !! | TACCCAAAATTGAAAATAAT+TGG | + | chr2_2:5045524-5045543 | None:intergenic | 20.0% |
| !!! | AATATCAGTATTTTATTGCA+AGG | - | chr2_2:5045551-5045570 | Msa0232800:intron | 20.0% |
| !! | ATATTGATACGTAATACATT+TGG | - | chr2_2:5045616-5045635 | Msa0232800:five_prime_UTR | 20.0% |
| !! | TATTGATACGTAATACATTT+GGG | - | chr2_2:5045617-5045636 | Msa0232800:five_prime_UTR | 20.0% |
| ! | GGGTATAGGAATTAATATTA+TGG | + | chr2_2:5042165-5042184 | None:intergenic | 25.0% |
| ! | ATTAATTCCTATACCCTTTA+TGG | - | chr2_2:5042169-5042188 | Msa0232800:three_prime_UTR | 25.0% |
| !!! | GTGTTTTTGCTAATTTTCAA+TGG | - | chr2_2:5042275-5042294 | Msa0232800:three_prime_UTR | 25.0% |
| !! | TTTTTGCTAATTTTCAATGG+CGG | - | chr2_2:5042278-5042297 | Msa0232800:three_prime_UTR | 25.0% |
| !!! | AGATGTTGATTTTTTACAAC+AGG | + | chr2_2:5042656-5042675 | None:intergenic | 25.0% |
| ! | ACAAGACTATCAAGAAAAAT+TGG | + | chr2_2:5042813-5042832 | None:intergenic | 25.0% |
| ! | GAATTAATGTCACAGAAATT+AGG | + | chr2_2:5042854-5042873 | None:intergenic | 25.0% |
| !! | AGTTGTTGGATTATTTGTTA+GGG | - | chr2_2:5043196-5043215 | Msa0232800:intron | 25.0% |
| ! | AAAACACTTGTAAATTTGCA+TGG | - | chr2_2:5043255-5043274 | Msa0232800:intron | 25.0% |
| !! | TCATATTAGTCCTTTTGAAT+CGG | + | chr2_2:5043361-5043380 | None:intergenic | 25.0% |
| ! | TATTTCATTTATAGGAGTCA+TGG | + | chr2_2:5043553-5043572 | None:intergenic | 25.0% |
| ! | ATAAGTCCAATGATATTTGT+AGG | + | chr2_2:5043774-5043793 | None:intergenic | 25.0% |
| !! | CTTCAATTTTGCATCAATTT+TGG | - | chr2_2:5043831-5043850 | Msa0232800:intron | 25.0% |
| !! | TTTTGCTTCATTGATCTATA+TGG | + | chr2_2:5043859-5043878 | None:intergenic | 25.0% |
| ! | TCATTCAATATATCGTACAA+TGG | + | chr2_2:5044167-5044186 | None:intergenic | 25.0% |
| ! | TATATTGAATGAGTTCCAAA+AGG | - | chr2_2:5044175-5044194 | Msa0232800:CDS | 25.0% |
| ! | ATATTGAATGAGTTCCAAAA+GGG | - | chr2_2:5044176-5044195 | Msa0232800:CDS | 25.0% |
| ! | CTATTAGAATTACTTGCATT+TGG | + | chr2_2:5044654-5044673 | None:intergenic | 25.0% |
| !!! | TCAGATATTTTGGAAATTGA+TGG | - | chr2_2:5044723-5044742 | Msa0232800:CDS | 25.0% |
| ! | AAAATATGCTAATCAAAAGC+AGG | + | chr2_2:5045005-5045024 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr2_2:5045169-5045188 | None:intergenic | 25.0% |
| ! | CATTGAATAAATGATGTATG+TGG | - | chr2_2:5045095-5045114 | Msa0232800:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr2_2:5045169-5045188 | Msa0232800:intron | 25.0% |
| !!! | GTAATATACAGTTTTGATGT+CGG | + | chr2_2:5045235-5045254 | None:intergenic | 25.0% |
| !!! | CATTTGTTTTTGTAACATGT+TGG | - | chr2_2:5045495-5045514 | Msa0232800:five_prime_UTR | 25.0% |
| ! | TATCTTGTCAATTTGTATCA+TGG | + | chr2_2:5045651-5045670 | None:intergenic | 25.0% |
| ! | ATTTTCCCAAAATAAACCAC+CGG | - | chr2_2:5042076-5042095 | Msa0232800:three_prime_UTR | 30.0% |
| ACAAAATCATCGTAACATTG+TGG | + | chr2_2:5042547-5042566 | None:intergenic | 30.0% | |
| CTAACAAATAATCCAACAAC+TGG | + | chr2_2:5043197-5043216 | None:intergenic | 30.0% | |
| CAGTTGTTGGATTATTTGTT+AGG | - | chr2_2:5043195-5043214 | Msa0232800:intron | 30.0% | |
| ! | TGTAAATTTGCATGGTAATG+AGG | - | chr2_2:5043263-5043282 | Msa0232800:intron | 30.0% |
| !! | ACTAAATTTGCCGATTCAAA+AGG | - | chr2_2:5043348-5043367 | Msa0232800:intron | 30.0% |
| ! | GACCAAATTATTGTTGTTGT+TGG | - | chr2_2:5043428-5043447 | Msa0232800:intron | 30.0% |
| GACCAACAACAACAATAATT+TGG | + | chr2_2:5043433-5043452 | None:intergenic | 30.0% | |
| ATGAAACAACTATCATTGCT+GGG | - | chr2_2:5043493-5043512 | Msa0232800:CDS | 30.0% | |
| ! | GGATTTGATGACACTAATAT+TGG | - | chr2_2:5043710-5043729 | Msa0232800:CDS | 30.0% |
| ATGACACTAATATTGGAGAA+AGG | - | chr2_2:5043717-5043736 | Msa0232800:CDS | 30.0% | |
| TGACACTAATATTGGAGAAA+GGG | - | chr2_2:5043718-5043737 | Msa0232800:CDS | 30.0% | |
| AAATATCATTGGACTTATCC+TGG | - | chr2_2:5043776-5043795 | Msa0232800:intron | 30.0% | |
| AACACATTGTATTGTATACC+AGG | + | chr2_2:5043797-5043816 | None:intergenic | 30.0% | |
| ! | TCTCAAATTTTTAACGGTGT+CGG | - | chr2_2:5044388-5044407 | Msa0232800:intron | 30.0% |
| CACAACACAATTTCAACAAA+AGG | + | chr2_2:5044518-5044537 | None:intergenic | 30.0% | |
| !! | TTTTTCAACACTTTCTCTTG+AGG | + | chr2_2:5044600-5044619 | None:intergenic | 30.0% |
| ! | CTACTTCTAGAAGCAAAAAA+TGG | - | chr2_2:5044685-5044704 | Msa0232800:CDS | 30.0% |
| AGCTGTAGGAATAATTACAA+TGG | - | chr2_2:5044779-5044798 | Msa0232800:intron | 30.0% | |
| AGATAATCAGAAAAGCTGTT+AGG | - | chr2_2:5045398-5045417 | Msa0232800:CDS | 30.0% | |
| GATAATCAGAAAAGCTGTTA+GGG | - | chr2_2:5045399-5045418 | Msa0232800:CDS | 30.0% | |
| ATAATCAGAAAAGCTGTTAG+GGG | - | chr2_2:5045400-5045419 | Msa0232800:CDS | 30.0% | |
| ACTACTTTCACAAGGAATAA+TGG | + | chr2_2:5045458-5045477 | None:intergenic | 30.0% | |
| ! | TATTTTATTGCAAGGCAACA+AGG | - | chr2_2:5045559-5045578 | Msa0232800:intron | 30.0% |
| ! | ATCACATAATACAGCTTTTG+TGG | + | chr2_2:5045589-5045608 | None:intergenic | 30.0% |
| ! | TTTTCCCAAAATAAACCACC+GGG | - | chr2_2:5042077-5042096 | Msa0232800:three_prime_UTR | 35.0% |
| ! | TCAATTGCCATAAAGGGTAT+AGG | + | chr2_2:5042179-5042198 | None:intergenic | 35.0% |
| CAGAGTTCAATTGCCATAAA+GGG | + | chr2_2:5042185-5042204 | None:intergenic | 35.0% | |
| TATTATGGACAGAACAGTAC+CGG | + | chr2_2:5042472-5042491 | None:intergenic | 35.0% | |
| TGAATTTAGATGTACCTCCA+TGG | + | chr2_2:5042714-5042733 | None:intergenic | 35.0% | |
| !! | TTGATAGTCTTGTTGTTGCT+TGG | - | chr2_2:5042820-5042839 | Msa0232800:intron | 35.0% |
| !! | TGATAGTCTTGTTGTTGCTT+GGG | - | chr2_2:5042821-5042840 | Msa0232800:intron | 35.0% |
| ACCAATTGTTAAACCATACC+GGG | + | chr2_2:5043011-5043030 | None:intergenic | 35.0% | |
| CACCAATTGTTAAACCATAC+CGG | + | chr2_2:5043012-5043031 | None:intergenic | 35.0% | |
| TGGTTTAACAATTGGTGCAA+CGG | - | chr2_2:5043015-5043034 | Msa0232800:CDS | 35.0% | |
| CATACAAGAACACGAACAAT+CGG | + | chr2_2:5043046-5043065 | None:intergenic | 35.0% | |
| TTGCTAATTGGATAAGCAAC+AGG | + | chr2_2:5043079-5043098 | None:intergenic | 35.0% | |
| ! | TGTTGCTTATCCAATTAGCA+AGG | - | chr2_2:5043078-5043097 | Msa0232800:CDS | 35.0% |
| TTGTGTTGTATTCCAGTTGT+TGG | - | chr2_2:5043182-5043201 | Msa0232800:intron | 35.0% | |
| ! | GTTGTTGGTCCAATTGTTTT+AGG | - | chr2_2:5043443-5043462 | Msa0232800:intron | 35.0% |
| GATGAAACAACTATCATTGC+TGG | - | chr2_2:5043492-5043511 | Msa0232800:CDS | 35.0% | |
| TGAAACAACTATCATTGCTG+GGG | - | chr2_2:5043494-5043513 | Msa0232800:CDS | 35.0% | |
| TAGGCTCCTCATAATAAACA+GGG | + | chr2_2:5043755-5043774 | None:intergenic | 35.0% | |
| ! | ATACCTTGGTATTTTGCGTA+TGG | + | chr2_2:5044033-5044052 | None:intergenic | 35.0% |
| !! | TGAGACATTTTGACAAGACA+GGG | - | chr2_2:5044222-5044241 | Msa0232800:CDS | 35.0% |
| TCTTCCAACAATAATTGCAC+TGG | - | chr2_2:5044251-5044270 | Msa0232800:CDS | 35.0% | |
| CTTACCAGTGCAATTATTGT+TGG | + | chr2_2:5044258-5044277 | None:intergenic | 35.0% | |
| ! | TATATGTGTTGTTGTCGTGT+CGG | + | chr2_2:5044346-5044365 | None:intergenic | 35.0% |
| TAAAACACATATACGGACAC+CGG | + | chr2_2:5044436-5044455 | None:intergenic | 35.0% | |
| TAGATTCAGTAAGAGATGTG+AGG | - | chr2_2:5044547-5044566 | Msa0232800:intron | 35.0% | |
| AGATTCAGTAAGAGATGTGA+GGG | - | chr2_2:5044548-5044567 | Msa0232800:intron | 35.0% | |
| !!! | TCTTCTTTTTCAGGTAGCTT+TGG | + | chr2_2:5044759-5044778 | None:intergenic | 35.0% |
| ! | TGTAATTGAAGAGCTTTTGC+AGG | - | chr2_2:5044806-5044825 | Msa0232800:intron | 35.0% |
| !!! | CAAAAGCAGGTTTAGTTTTG+TGG | + | chr2_2:5044992-5045011 | None:intergenic | 35.0% |
| CATTGAATGAGTGATGTATG+TGG | + | chr2_2:5045134-5045153 | None:intergenic | 35.0% | |
| ! | ATTCGTATACGGTGTCAATA+TGG | - | chr2_2:5045317-5045336 | Msa0232800:CDS | 35.0% |
| TCACTACTACTACTTTCACA+AGG | + | chr2_2:5045466-5045485 | None:intergenic | 35.0% | |
| TGTGAAAGTAGTAGTAGTGA+TGG | - | chr2_2:5045466-5045485 | Msa0232800:five_prime_UTR | 35.0% | |
| GTGAAAGTAGTAGTAGTGAT+GGG | - | chr2_2:5045467-5045486 | Msa0232800:five_prime_UTR | 35.0% | |
| TGAAAGTAGTAGTAGTGATG+GGG | - | chr2_2:5045468-5045487 | Msa0232800:five_prime_UTR | 35.0% | |
| !! | AAAGCCCGGTGGTTTATTTT+GGG | + | chr2_2:5042084-5042103 | None:intergenic | 40.0% |
| ! | AAAAGCCCGGTGGTTTATTT+TGG | + | chr2_2:5042085-5042104 | None:intergenic | 40.0% |
| CCAGAGTTCAATTGCCATAA+AGG | + | chr2_2:5042186-5042205 | None:intergenic | 40.0% | |
| CCTTTATGGCAATTGAACTC+TGG | - | chr2_2:5042183-5042202 | Msa0232800:three_prime_UTR | 40.0% | |
| CCTTGAGTTAGAGAAAGAAG+AGG | + | chr2_2:5042211-5042230 | None:intergenic | 40.0% | |
| CCTCTTCTTTCTCTAACTCA+AGG | - | chr2_2:5042208-5042227 | Msa0232800:three_prime_UTR | 40.0% | |
| ! | TTGCTAATTTTCAATGGCGG+TGG | - | chr2_2:5042281-5042300 | Msa0232800:three_prime_UTR | 40.0% |
| ! | GTTCTTCTTGTTGTCTTTGC+TGG | - | chr2_2:5042351-5042370 | Msa0232800:three_prime_UTR | 40.0% |
| TCTTTGCTGGATTGATGTCA+GGG | - | chr2_2:5042364-5042383 | Msa0232800:three_prime_UTR | 40.0% | |
| !! | TTTGAGCCTTGTTGATCTTG+AGG | - | chr2_2:5042407-5042426 | Msa0232800:three_prime_UTR | 40.0% |
| CAAGAACCTCAAGATCAACA+AGG | + | chr2_2:5042416-5042435 | None:intergenic | 40.0% | |
| CTTGAGGTTCTTGCTAAATC+TGG | - | chr2_2:5042423-5042442 | Msa0232800:three_prime_UTR | 40.0% | |
| CCTCAAGATCAAAAACATGC+CGG | - | chr2_2:5042450-5042469 | Msa0232800:three_prime_UTR | 40.0% | |
| !! | GATAGTCTTGTTGTTGCTTG+GGG | - | chr2_2:5042822-5042841 | Msa0232800:intron | 40.0% |
| ! | TTCCTCAATCAGTTTGTTCC+CGG | - | chr2_2:5042990-5043009 | Msa0232800:CDS | 40.0% |
| TCCCGGTATGGTTTAACAAT+TGG | - | chr2_2:5043007-5043026 | Msa0232800:CDS | 40.0% | |
| TTTAACAATTGGTGCAACGG+TGG | - | chr2_2:5043018-5043037 | Msa0232800:CDS | 40.0% | |
| CGATTGTTCGTGTTCTTGTA+TGG | - | chr2_2:5043044-5043063 | Msa0232800:CDS | 40.0% | |
| GTATCATGCACCTTGCTAAT+TGG | + | chr2_2:5043091-5043110 | None:intergenic | 40.0% | |
| !!! | TTGGTCCAATTGTTTTAGGC+TGG | - | chr2_2:5043447-5043466 | Msa0232800:intron | 40.0% |
| !!! | TGGTCCAATTGTTTTAGGCT+GGG | - | chr2_2:5043448-5043467 | Msa0232800:intron | 40.0% |
| CTTTCCCAGCCTAAAACAAT+TGG | + | chr2_2:5043455-5043474 | None:intergenic | 40.0% | |
| !!! | CAATTGTTTTAGGCTGGGAA+AGG | - | chr2_2:5043453-5043472 | Msa0232800:intron | 40.0% |
| CAAAACTTGATAGGTGAGTG+AGG | - | chr2_2:5043592-5043611 | Msa0232800:intron | 40.0% | |
| CAGAGTCCCTGTTTATTATG+AGG | - | chr2_2:5043746-5043765 | Msa0232800:CDS | 40.0% | |
| GTAGGCTCCTCATAATAAAC+AGG | + | chr2_2:5043756-5043775 | None:intergenic | 40.0% | |
| GAGGAGCCTACAAATATCAT+TGG | - | chr2_2:5043765-5043784 | Msa0232800:intron | 40.0% | |
| GTTAACTATTGACCCAGAAG+AGG | - | chr2_2:5043986-5044005 | Msa0232800:CDS | 40.0% | |
| TGACCATACGCAAAATACCA+AGG | - | chr2_2:5044027-5044046 | Msa0232800:intron | 40.0% | |
| TCGTACAATGGCATCATTTC+TGG | + | chr2_2:5044155-5044174 | None:intergenic | 40.0% | |
| !! | GTGAGACATTTTGACAAGAC+AGG | - | chr2_2:5044221-5044240 | Msa0232800:CDS | 40.0% |
| !! | TTCTCAGATTAGCCTTGTTC+TGG | - | chr2_2:5044295-5044314 | Msa0232800:intron | 40.0% |
| ATGTGAGGGTGACTATTGAT+GGG | - | chr2_2:5044562-5044581 | Msa0232800:intron | 40.0% | |
| ! | CCTACAGCTTCTTCTTTTTC+AGG | + | chr2_2:5044768-5044787 | None:intergenic | 40.0% |
| CCTGAAAAAGAAGAAGCTGT+AGG | - | chr2_2:5044765-5044784 | Msa0232800:intron | 40.0% | |
| CTACATTCATATACTCCCTC+CGG | - | chr2_2:5045038-5045057 | Msa0232800:CDS | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr2_2:5045173-5045192 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr2_2:5045172-5045191 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr2_2:5045172-5045191 | Msa0232800:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr2_2:5045173-5045192 | Msa0232800:intron | 40.0% | |
| CTCTTAACTTATACTCCCTC+CGG | + | chr2_2:5045191-5045210 | None:intergenic | 40.0% | |
| AGTCCATGCTCATTCGTATA+CGG | - | chr2_2:5045306-5045325 | Msa0232800:CDS | 40.0% | |
| AGAAAAGCTGTTAGGGGATT+TGG | - | chr2_2:5045406-5045425 | Msa0232800:CDS | 40.0% | |
| TTTCAATGGCGGTGGAGTAT+AGG | - | chr2_2:5042289-5042308 | Msa0232800:three_prime_UTR | 45.0% | |
| GTCTTTGCTGGATTGATGTC+AGG | - | chr2_2:5042363-5042382 | Msa0232800:three_prime_UTR | 45.0% | |
| TTGATGTCAGGGCTTACCTT+AGG | - | chr2_2:5042375-5042394 | Msa0232800:three_prime_UTR | 45.0% | |
| CAACAAGGCTCAAAGACATG+AGG | + | chr2_2:5042401-5042420 | None:intergenic | 45.0% | |
| !! | CCGGCATGTTTTTGATCTTG+AGG | + | chr2_2:5042453-5042472 | None:intergenic | 45.0% |
| AATTTGCAATGCAGCAGCCA+TGG | - | chr2_2:5042694-5042713 | Msa0232800:intron | 45.0% | |
| TACCGGGAACAAACTGATTG+AGG | + | chr2_2:5042995-5043014 | None:intergenic | 45.0% | |
| ! | CAATCAGTTTGTTCCCGGTA+TGG | - | chr2_2:5042995-5043014 | Msa0232800:CDS | 45.0% |
| !!! | TTGTTTTAGGCTGGGAAAGG+TGG | - | chr2_2:5043456-5043475 | Msa0232800:intron | 45.0% |
| TCACAGGTACTTCCTCTTCT+GGG | + | chr2_2:5044001-5044020 | None:intergenic | 45.0% | |
| TTCACAGGTACTTCCTCTTC+TGG | + | chr2_2:5044002-5044021 | None:intergenic | 45.0% | |
| ! | CGTATGGTCACACTTTTCAC+AGG | + | chr2_2:5044017-5044036 | None:intergenic | 45.0% |
| CAACAACAGCCATGTGACTA+TGG | + | chr2_2:5044202-5044221 | None:intergenic | 45.0% | |
| !! | AGATTAGCCTTGTTCTGGTG+TGG | - | chr2_2:5044300-5044319 | Msa0232800:intron | 45.0% |
| !! | GATTAGCCTTGTTCTGGTGT+GGG | - | chr2_2:5044301-5044320 | Msa0232800:intron | 45.0% |
| GATGTGAGGGTGACTATTGA+TGG | - | chr2_2:5044561-5044580 | Msa0232800:intron | 45.0% | |
| TGTGAGGGTGACTATTGATG+GGG | - | chr2_2:5044563-5044582 | Msa0232800:intron | 45.0% | |
| AGCATGGACTCGTCTAACTT+AGG | + | chr2_2:5045296-5045315 | None:intergenic | 45.0% | |
| ACACCGTATACGAATGAGCA+TGG | + | chr2_2:5045312-5045331 | None:intergenic | 45.0% | |
| !! | TAGGGGATTTGGTGTGTGAT+TGG | - | chr2_2:5045417-5045436 | Msa0232800:CDS | 45.0% |
| !! | TAATTAAATAAATAATAGAT+AGG | + | chr2_2:5044905-5044924 | None:intergenic | 5.0% |
| CTCTATGCTGCTCAAAAGCC+CGG | + | chr2_2:5042098-5042117 | None:intergenic | 50.0% | |
| GCTCAAAGACATGAGGCCTA+AGG | + | chr2_2:5042394-5042413 | None:intergenic | 50.0% | |
| ! | GAACTCTCTGAGAAGACTGC+TGG | - | chr2_2:5043522-5043541 | Msa0232800:CDS | 50.0% |
| ! | CCATGTGACTATGGCCCTTT+TGG | + | chr2_2:5044193-5044212 | None:intergenic | 50.0% |
| CCAAAAGGGCCATAGTCACA+TGG | - | chr2_2:5044190-5044209 | Msa0232800:CDS | 50.0% | |
| TATGCTGCTCAAAAGCCCGG+TGG | + | chr2_2:5042095-5042114 | None:intergenic | 55.0% | |
| TTGCAATGCAGCAGCCATGG+AGG | - | chr2_2:5042697-5042716 | Msa0232800:intron | 55.0% | |
| ACGTGTCCCACACCAGAACA+AGG | + | chr2_2:5044310-5044329 | None:intergenic | 55.0% | |
| GTCCGCGTTCGTGTCGTGTC+CGG | - | chr2_2:5044414-5044433 | Msa0232800:intron | 65.0% | |
| CACCGGACACGACACGAACG+CGG | + | chr2_2:5044419-5044438 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 5042071 | 5045675 | 5042071 | ID=Msa0232800;Name=Msa0232800 |
| chr2_2 | mRNA | 5042071 | 5045675 | 5042071 | ID=Msa0232800-mRNA-1;Parent=Msa0232800;Name=Msa0232800-mRNA-1;_AED=0.19;_eAED=0.19;_QI=203|1|1|1|0.83|0.69|13|544|429 |
| chr2_2 | exon | 5042071 | 5042548 | 5042071 | ID=Msa0232800-mRNA-1:exon:2250;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5042704 | 5042814 | 5042704 | ID=Msa0232800-mRNA-1:exon:2249;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5042919 | 5043196 | 5042919 | ID=Msa0232800-mRNA-1:exon:2248;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5043474 | 5043598 | 5043474 | ID=Msa0232800-mRNA-1:exon:2247;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5043698 | 5043771 | 5043698 | ID=Msa0232800-mRNA-1:exon:2246;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5043949 | 5044036 | 5043949 | ID=Msa0232800-mRNA-1:exon:2245;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5044142 | 5044281 | 5044142 | ID=Msa0232800-mRNA-1:exon:2244;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5044462 | 5044548 | 5044462 | ID=Msa0232800-mRNA-1:exon:2243;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5044647 | 5044760 | 5044647 | ID=Msa0232800-mRNA-1:exon:2242;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5044859 | 5044942 | 5044859 | ID=Msa0232800-mRNA-1:exon:2241;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5045028 | 5045104 | 5045028 | ID=Msa0232800-mRNA-1:exon:2240;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5045275 | 5045563 | 5045275 | ID=Msa0232800-mRNA-1:exon:2239;Parent=Msa0232800-mRNA-1 |
| chr2_2 | exon | 5045584 | 5045675 | 5045584 | ID=Msa0232800-mRNA-1:exon:2238;Parent=Msa0232800-mRNA-1 |
| chr2_2 | five_prime_UTR | 5045584 | 5045675 | 5045584 | ID=Msa0232800-mRNA-1:five_prime_utr;Parent=Msa0232800-mRNA-1 |
| chr2_2 | five_prime_UTR | 5045453 | 5045563 | 5045453 | ID=Msa0232800-mRNA-1:five_prime_utr;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5045275 | 5045452 | 5045275 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5045028 | 5045104 | 5045028 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5044859 | 5044942 | 5044859 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5044647 | 5044760 | 5044647 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5044462 | 5044548 | 5044462 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5044142 | 5044281 | 5044142 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5043949 | 5044036 | 5043949 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5043698 | 5043771 | 5043698 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5043474 | 5043598 | 5043474 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5042919 | 5043196 | 5042919 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | CDS | 5042770 | 5042814 | 5042770 | ID=Msa0232800-mRNA-1:cds;Parent=Msa0232800-mRNA-1 |
| chr2_2 | three_prime_UTR | 5042704 | 5042769 | 5042704 | ID=Msa0232800-mRNA-1:three_prime_utr;Parent=Msa0232800-mRNA-1 |
| chr2_2 | three_prime_UTR | 5042071 | 5042548 | 5042071 | ID=Msa0232800-mRNA-1:three_prime_utr;Parent=Msa0232800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
