AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0236750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0236750 MtrunA17_Chr2g0285711 97.050 339 9 1 1 339 117 454 0.0 676
Msa0236750 MtrunA17_Chr8g0381091 76.968 343 75 3 1 339 113 455 0.0 535
Msa0236750 MtrunA17_Chr4g0063311 52.603 365 147 6 1 339 126 490 3.54e-123 363
Msa0236750 MtrunA17_Chr8g0335351 54.938 324 128 4 1 309 400 720 5.80e-115 350
Msa0236750 MtrunA17_Chr2g0290691 51.497 334 132 6 1 310 234 561 4.89e-113 340
Msa0236750 MtrunA17_Chr7g0250631 53.086 324 135 4 1 310 394 714 7.91e-112 342
Msa0236750 MtrunA17_Chr1g0179101 52.294 327 138 6 1 312 500 823 2.74e-111 343
Msa0236750 MtrunA17_Chr3g0080101 50.751 333 138 8 1 313 445 771 2.69e-108 333
Msa0236750 MtrunA17_Chr7g0227331 52.695 334 128 5 1 310 262 589 3.74e-108 328
Msa0236750 MtrunA17_Chr7g0266031 52.308 325 137 7 1 310 522 843 4.57e-107 332
Msa0236750 MtrunA17_Chr2g0312641 50.311 322 142 5 1 320 125 430 6.98e-105 315
Msa0236750 MtrunA17_Chr2g0309421 49.538 325 146 4 1 310 205 526 4.81e-104 316
Msa0236750 MtrunA17_Chr2g0321101 51.746 315 134 5 2 302 123 433 2.18e-102 308
Msa0236750 MtrunA17_Chr8g0356291 49.846 325 145 5 1 310 157 478 4.62e-102 310
Msa0236750 MtrunA17_Chr6g0449401 45.316 395 152 9 1 339 293 679 7.82e-100 308
Msa0236750 MtrunA17_Chr8g0369091 45.603 307 134 4 1 307 627 900 4.74e-87 281
Msa0236750 MtrunA17_Chr4g0030361 43.087 311 137 4 1 309 337 609 8.11e-83 263
Msa0236750 MtrunA17_Chr2g0327561 44.373 311 144 4 1 309 656 939 3.69e-80 263
Msa0236750 MtrunA17_Chr4g0032761 40.244 328 173 6 1 311 49 370 1.15e-71 228
Msa0236750 MtrunA17_Chr8g0338741 39.193 347 175 11 1 330 50 377 2.47e-67 217
Msa0236750 MtrunA17_Chr2g0329011 39.617 313 161 9 1 310 46 333 1.56e-64 209
Msa0236750 MtrunA17_Chr7g0234641 36.137 321 183 9 1 310 43 352 1.05e-61 202
Msa0236750 MtrunA17_Chr6g0478601 34.783 299 160 8 1 297 139 404 1.68e-46 165
Msa0236750 MtrunA17_Chr4g0018201 34.740 308 147 9 1 297 787 1051 4.42e-42 156
Msa0236750 MtrunA17_Chr5g0428981 34.416 308 148 9 1 297 791 1055 9.11e-42 155
Msa0236750 MtrunA17_Chr4g0059751 31.629 313 146 6 1 310 124 371 1.01e-41 150
Msa0236750 MtrunA17_Chr1g0183651 31.157 337 205 10 1 334 148 460 2.29e-39 146
Msa0236750 MtrunA17_Chr1g0153321 31.908 304 181 9 1 301 136 416 4.29e-39 145
Msa0236750 MtrunA17_Chr1g0197721 31.014 345 169 7 1 330 79 369 4.31e-39 144
Msa0236750 MtrunA17_Chr1g0187581 29.912 341 205 10 1 334 145 458 5.64e-39 144
Msa0236750 MtrunA17_Chr3g0135951 31.988 322 187 12 1 311 122 422 9.84e-38 141
Msa0236750 MtrunA17_Chr7g0261491 32.704 318 181 11 1 309 148 441 3.94e-37 140
Msa0236750 MtrunA17_Chr2g0299781 33.333 303 169 11 1 293 141 420 1.18e-36 138
Msa0236750 MtrunA17_Chr1g0167351 31.529 314 188 9 1 309 138 429 2.42e-36 137
Msa0236750 MtrunA17_Chr1g0167311 30.625 320 197 9 1 318 143 439 1.15e-34 132
Msa0236750 MtrunA17_Chr7g0245031 40.833 120 69 1 1 120 176 293 1.52e-23 100
Msa0236750 MtrunA17_Chr7g0245031 37.594 133 72 5 185 311 300 427 1.30e-18 86.7
Msa0236750 MtrunA17_Chr8g0353621 26.190 294 148 6 1 294 38 262 1.15e-21 92.8
Msa0236750 MtrunA17_Chr2g0286501 28.731 268 132 6 12 278 82 291 1.64e-21 95.9
Msa0236750 MtrunA17_Chr5g0441011 25.806 279 144 5 1 278 41 257 2.77e-21 94.4
Msa0236750 MtrunA17_Chr4g0013131 24.373 279 147 5 1 278 40 255 5.21e-20 90.5
Msa0236750 MtrunA17_Chr3g0125381 28.839 267 122 9 28 293 7 206 1.47e-19 85.9
Msa0236750 MtrunA17_Chr2g0304111 24.830 294 154 6 1 293 51 278 4.92e-19 87.8
Msa0236750 MtrunA17_Chr7g0274941 26.689 296 151 8 1 294 44 275 9.40e-18 82.4
Msa0236750 MtrunA17_Chr7g0244521 24.830 294 153 7 1 293 40 266 9.44e-18 84.0
Msa0236750 MtrunA17_Chr1g0188031 24.912 285 140 7 1 278 49 266 1.11e-17 83.6
Msa0236750 MtrunA17_Chr3g0132671 27.759 299 142 9 12 307 86 313 1.26e-17 83.6
Msa0236750 MtrunA17_Chr6g0468751 25.974 308 159 9 1 308 47 285 5.90e-17 81.6
Msa0236750 MtrunA17_Chr6g0453681 25.974 308 159 9 1 308 47 285 6.97e-17 81.3
Msa0236750 MtrunA17_Chr5g0428031 31.944 144 96 2 1 144 37 178 2.73e-16 79.3
Msa0236750 MtrunA17_Chr4g0074111 25.541 231 113 4 1 230 46 218 2.87e-15 76.3
Msa0236750 MtrunA17_Chr1g0190131 25.503 298 149 8 1 294 37 265 4.35e-15 74.3
Msa0236750 MtrunA17_Chr4g0063881 22.109 294 160 6 1 293 39 264 6.37e-15 75.5
Msa0236750 MtrunA17_Chr2g0284011 23.297 279 150 6 1 278 40 255 6.84e-15 75.1
Msa0236750 MtrunA17_Chr4g0047201 23.832 214 105 2 21 234 251 406 1.13e-14 74.7
Msa0236750 MtrunA17_Chr8g0346081 23.022 278 151 4 1 278 45 259 1.64e-14 73.9
Msa0236750 MtrunA17_Chr6g0486661 34.091 132 74 6 184 309 910 1034 2.27e-14 74.3
Msa0236750 MtrunA17_Chr5g0432471 20.789 279 157 5 1 278 40 255 2.62e-14 73.6
Msa0236750 MtrunA17_Chr8g0346071 22.526 293 160 5 1 293 45 270 3.26e-14 73.2
Msa0236750 MtrunA17_Chr4g0047191 24.766 214 103 3 21 234 95 250 4.01e-14 72.4
Msa0236750 MtrunA17_Chr2g0302431 21.505 279 156 5 1 278 48 264 4.03e-14 73.2
Msa0236750 MtrunA17_Chr4g0047211 24.766 214 103 3 21 234 90 245 4.82e-14 72.4
Msa0236750 MtrunA17_Chr8g0351491 36.190 105 60 2 189 293 170 267 5.10e-14 71.2
Msa0236750 MtrunA17_Chr8g0351491 31.452 124 81 2 1 123 44 164 4.76e-11 62.8
Msa0236750 MtrunA17_Chr3g0107051 22.667 300 159 7 1 290 49 285 7.74e-14 72.0
Msa0236750 MtrunA17_Chr1g0203881 34.959 123 74 3 2 120 70 190 1.78e-13 71.2
Msa0236750 MtrunA17_Chr4g0000431 27.830 212 98 4 21 231 70 227 3.82e-13 70.5
Msa0236750 MtrunA17_Chr2g0284031 23.214 280 151 5 1 279 59 275 6.38e-13 69.3
Msa0236750 MtrunA17_Chr3g0107011 29.452 146 98 2 1 144 42 184 6.57e-13 69.3
Msa0236750 MtrunA17_Chr3g0140631 35.780 109 63 2 186 294 188 289 7.04e-13 68.2
Msa0236750 MtrunA17_Chr1g0150321 23.077 260 134 6 21 278 61 256 7.84e-13 68.9
Msa0236750 MtrunA17_Chr2g0282321 24.457 184 81 2 47 230 238 363 8.61e-13 68.9
Msa0236750 MtrunA17_Chr5g0432491 22.789 294 160 7 1 293 51 278 1.61e-12 68.2
Msa0236750 MtrunA17_Chr6g0450571 26.596 282 132 8 21 293 62 277 2.95e-12 67.8
Msa0236750 MtrunA17_Chr1g0205421 30.263 152 97 4 1 148 40 186 3.09e-12 67.4
Msa0236750 MtrunA17_Chr7g0272841 36.036 111 67 2 12 120 110 218 3.35e-12 67.4
Msa0236750 MtrunA17_Chr8g0379091 22.968 283 147 6 1 278 54 270 3.44e-12 67.4
Msa0236750 MtrunA17_Chr3g0114511 22.258 310 172 9 1 309 60 301 8.00e-12 65.9
Msa0236750 MtrunA17_Chr2g0330211 35.000 100 65 0 21 120 65 164 2.28e-11 64.7
Msa0236750 MtrunA17_Chr4g0045261 35.088 114 68 3 184 297 296 403 2.38e-11 64.7
Msa0236750 MtrunA17_Chr3g0129721 34.459 148 88 5 3 144 51 195 7.06e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0236750 AT2G34650.1 69.027 339 97 3 1 339 108 438 1.79e-166 471
Msa0236750 AT5G47750.1 54.407 329 128 5 1 310 219 544 3.89e-117 351
Msa0236750 AT2G26700.1 47.087 412 142 9 1 339 117 525 1.15e-116 347
Msa0236750 AT4G26610.1 53.681 326 132 4 1 310 151 473 7.62e-116 345
Msa0236750 AT5G55910.2 49.863 365 154 7 1 339 137 498 3.32e-112 335
Msa0236750 AT5G55910.1 49.863 365 154 7 1 339 137 498 3.32e-112 335
Msa0236750 AT5G40030.1 52.160 324 136 5 1 310 142 460 1.44e-111 333
Msa0236750 AT2G36350.1 51.335 337 133 7 1 312 587 917 6.36e-109 339
Msa0236750 AT2G44830.2 53.354 328 131 7 1 310 391 714 3.63e-108 333
Msa0236750 AT2G44830.3 53.354 328 131 7 1 310 391 714 3.63e-108 333
Msa0236750 AT2G44830.1 53.354 328 131 7 1 310 391 714 3.63e-108 333
Msa0236750 AT3G52890.2 50.448 335 137 6 1 310 566 896 8.53e-106 330
Msa0236750 AT3G52890.4 50.448 335 137 6 1 310 566 896 8.53e-106 330
Msa0236750 AT3G52890.1 50.448 335 137 6 1 310 566 896 8.53e-106 330
Msa0236750 AT3G52890.3 50.448 335 137 6 1 310 566 896 8.53e-106 330
Msa0236750 AT3G12690.1 50.145 345 150 5 1 328 213 552 1.00e-105 321
Msa0236750 AT3G12690.3 50.145 345 150 5 1 328 213 552 1.00e-105 321
Msa0236750 AT3G12690.2 50.145 345 150 5 1 328 213 552 1.00e-105 321
Msa0236750 AT1G79250.1 50.606 330 137 5 1 310 174 497 1.49e-105 320
Msa0236750 AT1G79250.3 50.606 330 137 5 1 310 174 497 1.49e-105 320
Msa0236750 AT1G79250.2 50.606 330 137 5 1 310 174 497 1.49e-105 320
Msa0236750 AT1G79250.4 50.606 330 137 5 1 310 174 497 1.49e-105 320
Msa0236750 AT1G16440.1 50.949 316 144 4 1 310 143 453 5.60e-104 314
Msa0236750 AT3G27580.2 50.153 327 143 4 1 310 210 533 1.15e-103 316
Msa0236750 AT3G27580.1 50.153 327 143 4 1 310 210 533 1.15e-103 316
Msa0236750 AT5G03640.2 49.394 330 144 4 1 310 569 895 2.56e-103 324
Msa0236750 AT5G03640.1 49.394 330 144 4 1 310 569 895 2.56e-103 324
Msa0236750 AT3G44610.1 50.470 319 134 6 2 301 108 421 8.81e-102 307
Msa0236750 AT1G53700.1 47.975 321 152 5 1 321 123 428 1.35e-96 295
Msa0236750 AT3G14370.1 46.914 324 149 5 1 318 116 422 4.27e-95 291
Msa0236750 AT5G58140.6 46.254 307 132 4 1 307 605 878 4.66e-89 286
Msa0236750 AT5G58140.7 46.254 307 132 4 1 307 605 878 4.66e-89 286
Msa0236750 AT5G58140.5 46.254 307 132 4 1 307 605 878 4.66e-89 286
Msa0236750 AT5G58140.2 46.254 307 132 4 1 307 605 878 4.66e-89 286
Msa0236750 AT5G58140.1 46.254 307 132 4 1 307 605 878 4.66e-89 286
Msa0236750 AT5G58140.3 46.358 302 129 4 1 302 605 873 1.18e-87 282
Msa0236750 AT3G45780.2 45.307 309 138 5 1 309 691 968 1.30e-80 265
Msa0236750 AT3G45780.1 45.307 309 138 5 1 309 691 968 1.30e-80 265
Msa0236750 AT1G51170.1 41.824 318 164 9 1 310 54 358 3.28e-68 219
Msa0236750 AT3G20830.1 41.265 332 163 10 8 321 52 369 7.08e-67 216
Msa0236750 AT3G25250.1 37.304 319 176 6 1 310 44 347 5.74e-63 206
Msa0236750 AT4G13000.1 37.778 315 173 7 1 311 46 341 2.58e-60 198
Msa0236750 AT3G08730.1 33.438 317 139 9 1 311 162 412 5.14e-47 165
Msa0236750 AT3G08730.2 33.438 317 139 9 1 311 162 412 5.14e-47 165
Msa0236750 AT1G45160.1 35.987 314 157 7 1 308 698 973 5.71e-47 171
Msa0236750 AT1G45160.2 35.987 314 157 7 1 308 698 973 7.22e-47 170
Msa0236750 AT5G04510.2 31.290 310 158 5 1 309 72 327 1.78e-44 157
Msa0236750 AT3G08720.1 32.808 317 141 9 1 311 168 418 2.11e-44 159
Msa0236750 AT3G08720.3 32.808 317 141 9 1 311 168 418 2.11e-44 159
Msa0236750 AT3G08720.4 32.808 317 141 9 1 311 168 418 2.11e-44 159
Msa0236750 AT3G08720.2 32.808 317 141 9 1 311 168 418 2.11e-44 159
Msa0236750 AT5G04510.1 31.290 310 158 5 1 309 72 327 3.82e-44 158
Msa0236750 AT3G17850.1 35.333 300 157 8 1 297 910 1175 5.19e-44 162
Msa0236750 AT3G10540.1 30.968 310 159 5 1 309 73 328 1.26e-43 157
Msa0236750 AT1G48490.3 34.564 298 156 7 1 297 856 1115 2.16e-43 160
Msa0236750 AT1G48490.2 34.564 298 156 7 1 297 856 1115 2.16e-43 160
Msa0236750 AT1G48490.1 34.564 298 156 7 1 297 856 1115 2.16e-43 160
Msa0236750 AT1G48490.4 34.564 298 156 7 1 297 857 1116 2.16e-43 160
Msa0236750 AT5G62310.1 33.125 320 179 7 1 318 782 1068 9.15e-43 158
Msa0236750 AT4G33080.2 32.500 320 185 12 1 309 122 421 1.54e-40 149
Msa0236750 AT4G33080.1 32.500 320 185 12 1 309 122 421 2.05e-40 149
Msa0236750 AT1G30640.3 31.173 324 196 10 1 319 55 356 6.92e-40 146
Msa0236750 AT1G30640.2 31.173 324 196 10 1 319 148 449 1.18e-39 147
Msa0236750 AT1G30640.1 31.173 324 196 10 1 319 148 449 1.18e-39 147
Msa0236750 AT3G23310.1 29.240 342 207 8 1 334 148 462 3.25e-38 143
Msa0236750 AT4G14350.3 29.674 337 212 8 1 335 147 460 1.17e-37 141
Msa0236750 AT4G14350.2 29.674 337 212 8 1 335 147 460 1.86e-37 141
Msa0236750 AT4G14350.1 29.674 337 212 8 1 335 147 460 1.86e-37 141
Msa0236750 AT4G14350.4 29.674 337 212 8 1 335 147 460 1.86e-37 141
Msa0236750 AT1G03920.2 31.529 314 185 9 1 310 52 339 4.57e-37 139
Msa0236750 AT5G09890.2 32.119 302 173 9 1 295 130 406 5.77e-37 139
Msa0236750 AT5G09890.1 32.119 302 173 9 1 295 130 406 6.31e-37 139
Msa0236750 AT1G03920.1 31.529 314 185 9 1 310 165 452 1.28e-36 139
Msa0236750 AT1G03920.3 31.529 314 185 9 1 310 165 452 1.28e-36 139
Msa0236750 AT5G04510.3 30.370 270 134 4 1 270 72 287 2.32e-36 133
Msa0236750 AT2G20470.3 31.715 309 172 10 1 301 152 429 5.70e-35 134
Msa0236750 AT2G20470.2 31.715 309 172 10 1 301 152 429 9.19e-35 134
Msa0236750 AT2G20470.1 31.715 309 172 10 1 301 152 429 9.19e-35 134
Msa0236750 AT2G19400.1 30.820 305 176 8 1 293 133 414 4.06e-34 131
Msa0236750 AT3G50530.2 27.922 308 182 9 1 303 179 451 1.95e-22 98.6
Msa0236750 AT2G26980.2 25.455 275 142 6 1 274 42 254 2.24e-20 89.7
Msa0236750 AT2G26980.1 25.448 279 145 6 1 278 42 258 2.51e-20 91.3
Msa0236750 AT2G26980.5 25.448 279 145 6 1 278 42 258 3.09e-20 91.3
Msa0236750 AT2G26980.4 25.448 279 145 6 1 278 52 268 3.41e-20 91.7
Msa0236750 AT2G26980.3 25.448 279 145 6 1 278 42 258 3.73e-20 91.3
Msa0236750 AT5G57630.2 26.165 279 139 7 1 278 40 252 3.99e-20 90.9
Msa0236750 AT5G57630.1 26.165 279 139 7 1 278 40 252 4.19e-20 90.9
Msa0236750 AT2G20050.2 37.815 119 65 3 186 301 931 1043 1.44e-19 90.5
Msa0236750 AT5G18700.1 26.183 317 165 10 12 325 37 287 1.44e-19 90.5
Msa0236750 AT2G20050.1 37.815 119 65 3 186 301 934 1046 1.56e-19 90.5
Msa0236750 AT2G25090.1 28.283 297 148 12 1 293 43 278 5.78e-19 87.8
Msa0236750 AT1G30270.1 24.014 279 149 5 1 278 59 275 6.16e-19 87.8
Msa0236750 AT1G30270.2 24.014 279 149 5 1 278 59 275 6.19e-19 87.8
Msa0236750 AT3G45240.2 26.502 283 137 8 21 300 162 376 4.58e-18 84.7
Msa0236750 AT3G45240.1 26.502 283 137 8 21 300 162 376 4.58e-18 84.7
Msa0236750 AT3G04530.1 26.335 281 147 5 2 281 40 261 1.33e-17 82.0
Msa0236750 AT3G01090.3 25.597 293 150 8 1 293 47 271 1.82e-17 83.6
Msa0236750 AT3G01090.1 25.597 293 150 8 1 293 47 271 1.82e-17 83.6
Msa0236750 AT3G01090.2 25.597 293 150 8 1 293 70 294 2.23e-17 83.6
Msa0236750 AT4G24400.2 32.639 144 95 1 1 144 37 178 4.00e-17 82.4
Msa0236750 AT4G24400.1 32.639 144 95 1 1 144 37 178 5.50e-17 82.0
Msa0236750 AT1G48260.1 23.469 294 158 6 1 293 39 266 8.90e-17 81.3
Msa0236750 AT5G01810.3 24.497 298 158 6 1 297 40 271 1.69e-16 80.1
Msa0236750 AT3G17510.1 24.555 281 145 6 1 278 48 264 1.75e-16 80.5
Msa0236750 AT5G01810.1 24.028 283 151 5 1 282 40 259 2.08e-16 80.1
Msa0236750 AT5G01810.2 24.028 283 151 5 1 282 40 259 2.08e-16 80.1
Msa0236750 AT3G29160.3 24.915 293 152 8 1 293 48 272 2.34e-16 79.7
Msa0236750 AT5G45820.1 23.656 279 149 5 1 278 40 255 2.41e-16 80.1
Msa0236750 AT5G21326.1 32.192 146 95 2 1 144 41 184 2.52e-16 80.1
Msa0236750 AT2G45490.1 38.679 106 58 3 189 294 176 274 3.16e-16 78.2
Msa0236750 AT2G45490.1 30.645 124 82 2 1 123 50 170 3.17e-11 63.5
Msa0236750 AT3G29160.1 24.915 293 152 8 1 293 48 272 4.01e-16 79.7
Msa0236750 AT3G29160.2 24.915 293 152 8 1 293 48 272 4.01e-16 79.7
Msa0236750 AT2G34180.1 23.729 295 155 7 1 293 85 311 8.51e-16 78.6
Msa0236750 AT4G29810.1 28.082 292 131 10 21 299 116 341 8.86e-16 77.8
Msa0236750 AT4G29810.2 28.082 292 131 10 21 299 125 350 8.96e-16 77.8
Msa0236750 AT1G01140.1 22.581 279 153 5 1 278 47 263 1.10e-15 78.2
Msa0236750 AT1G01140.3 22.581 279 153 5 1 278 47 263 1.10e-15 78.2
Msa0236750 AT1G01140.2 22.939 279 154 6 1 278 47 265 1.33e-15 77.8
Msa0236750 AT4G24100.2 27.358 212 99 4 21 231 79 236 2.13e-15 77.8
Msa0236750 AT5G25110.1 24.014 279 148 6 1 278 71 286 2.15e-15 77.4
Msa0236750 AT2G30360.1 25.182 274 140 6 21 294 70 278 3.75e-15 76.6
Msa0236750 AT5G58140.4 44.156 77 43 0 1 77 605 681 4.19e-15 76.6
Msa0236750 AT5G39440.1 23.549 293 155 7 1 293 47 270 1.68e-14 74.7
Msa0236750 AT4G30960.1 22.993 274 143 6 21 293 72 278 1.86e-14 74.3
Msa0236750 AT5G35410.2 29.861 144 99 1 1 144 39 180 2.17e-14 73.9
Msa0236750 AT5G35410.1 29.861 144 99 1 1 144 39 180 2.93e-14 73.9
Msa0236750 AT5G21222.1 30.137 146 98 2 1 144 41 184 3.83e-14 73.9
Msa0236750 AT5G21222.2 30.137 146 98 2 1 144 41 184 3.83e-14 73.9
Msa0236750 AT5G21222.4 30.137 146 98 2 1 144 41 184 3.83e-14 73.9
Msa0236750 AT5G21222.3 30.137 146 98 2 1 144 41 184 3.83e-14 73.9
Msa0236750 AT1G12680.1 34.513 113 71 2 10 121 137 247 8.03e-14 72.4
Msa0236750 AT4G29810.3 27.407 270 126 8 21 282 125 332 1.76e-13 70.9
Msa0236750 AT5G10930.1 32.031 128 81 3 1 126 40 163 4.68e-13 70.1
Msa0236750 AT5G45810.1 31.746 126 83 1 1 126 56 178 5.24e-13 70.1
Msa0236750 AT4G18700.1 31.746 126 83 1 1 126 54 176 7.55e-13 69.7
Msa0236750 AT5G57565.5 39.394 99 56 2 47 145 33 127 9.42e-13 65.5
Msa0236750 AT5G57565.1 39.394 99 56 2 47 145 33 127 9.42e-13 65.5
Msa0236750 AT1G29230.1 21.864 279 154 5 1 278 102 317 9.58e-13 69.3
Msa0236750 AT1G08650.1 37.864 103 59 2 191 293 176 273 1.11e-12 67.8
Msa0236750 AT1G08650.2 39.130 92 55 1 191 282 176 266 1.29e-12 67.8
Msa0236750 AT4G32830.1 34.862 109 64 2 186 294 182 283 2.07e-12 67.4
Msa0236750 AT3G23000.1 24.000 275 138 6 12 278 58 269 2.26e-12 68.2
Msa0236750 AT5G57565.2 39.604 101 45 3 41 132 18 111 2.33e-12 63.9
Msa0236750 AT5G57565.6 39.604 101 45 3 41 132 18 111 2.33e-12 63.9
Msa0236750 AT2G25880.2 33.028 109 66 2 186 294 144 245 3.93e-12 65.9
Msa0236750 AT4G21940.1 36.792 106 61 3 190 295 263 362 4.75e-12 67.4
Msa0236750 AT4G21940.2 36.792 106 61 3 190 295 263 362 4.87e-12 67.4
Msa0236750 AT4G21940.3 36.792 106 61 3 190 295 263 362 5.24e-12 67.0
Msa0236750 AT2G25880.1 33.028 109 66 2 186 294 176 277 5.31e-12 65.9
Msa0236750 AT1G54960.1 36.036 111 67 2 12 120 110 218 6.05e-12 67.0
Msa0236750 AT1G54960.2 36.036 111 67 2 12 120 110 218 6.05e-12 67.0
Msa0236750 AT2G25880.4 33.028 109 66 2 186 294 189 290 7.06e-12 65.9
Msa0236750 AT3G50530.1 36.667 120 70 3 184 303 307 420 7.55e-12 66.6
Msa0236750 AT3G06030.1 26.207 290 141 10 12 295 110 332 9.94e-12 66.6
Msa0236750 AT5G57565.4 36.792 106 52 3 47 144 33 131 1.23e-11 63.2
Msa0236750 AT1G09000.2 36.036 111 67 2 12 120 111 219 1.31e-11 66.2
Msa0236750 AT1G09000.1 36.036 111 67 2 12 120 111 219 1.52e-11 65.9
Msa0236750 AT2G25880.3 33.028 109 66 2 186 294 237 338 1.78e-11 65.1
Msa0236750 AT4G14580.1 23.024 291 138 8 1 278 49 266 2.49e-11 64.7
Msa0236750 AT2G45490.2 37.805 82 48 2 189 270 176 254 2.81e-11 63.5
Msa0236750 AT2G45490.2 30.645 124 82 2 1 123 50 170 2.86e-11 63.5
Msa0236750 AT1G23700.2 25.172 290 145 8 6 293 50 269 3.13e-11 64.3
Msa0236750 AT1G73500.1 32.258 124 75 3 1 122 75 191 3.86e-11 63.5
Msa0236750 AT1G23700.1 25.260 289 144 8 7 293 51 269 4.75e-11 63.9
Msa0236750 AT1G23700.3 25.260 289 144 8 7 293 51 269 5.89e-11 63.9
Msa0236750 AT2G38490.1 33.333 126 80 2 1 126 57 178 6.36e-11 63.5
Msa0236750 AT4G14480.1 35.000 100 65 0 21 120 62 161 8.73e-11 63.2

Find 133 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTCTCTTGCATTGTTA+TGG 0.231413 2_2:+9723865 Msa0236750:CDS
TCAACAAATATCATAGAAAT+TGG 0.247817 2_2:-9723355 None:intergenic
CTTCTTTGTAGGACTTAATT+TGG 0.256975 2_2:+9724936 Msa0236750:CDS
CGCAACGTTGCTTCGTTTGT+AGG 0.260542 2_2:-9724760 None:intergenic
AGTGGTAGTGGACGTGATTC+TGG 0.265800 2_2:+9723399 Msa0236750:five_prime_UTR
GTCTTTATCAACAACCTTCA+TGG 0.286201 2_2:-9723735 None:intergenic
TTGGAGTATCTTCACATGTT+AGG 0.360277 2_2:+9724319 Msa0236750:CDS
AAGTCCCACCCCTTCTTTGT+AGG 0.364942 2_2:+9724925 Msa0236750:CDS
TGCATTTCAAGCGCGCTTGA+AGG 0.371752 2_2:-9724823 None:intergenic
GTTATGCCGCCGGAAGTTCC+TGG 0.372462 2_2:+9724973 Msa0236750:CDS
AAAGTCACATAGAGCGGAAA+TGG 0.379418 2_2:+9723775 Msa0236750:CDS
GGTTTGATGGAGAGAGATTC+CGG 0.379866 2_2:-9723540 None:intergenic
TTCAATCATTTCAATCAAAC+CGG 0.385393 2_2:+9724569 Msa0236750:CDS
ACAGGCAAAGGGAGTTGATA+TGG 0.390686 2_2:-9724515 None:intergenic
GGAGGAGCGGTGAGGTTTGA+TGG 0.396146 2_2:-9723553 None:intergenic
GTTTCACCGGAAGTAGCTTC+TGG 0.402850 2_2:+9724652 Msa0236750:CDS
GACTTAATTTGGCGTTGATT+CGG 0.403997 2_2:+9724947 Msa0236750:CDS
CTTCTTAAGCCAGGAACTTC+CGG 0.406344 2_2:-9724982 None:intergenic
ACTTCTGGTGCATCATCATC+AGG 0.409730 2_2:-9724472 None:intergenic
CTGTAGACTCGGATCAAAAC+GGG 0.417576 2_2:+9724888 Msa0236750:CDS
TACACCGCCATCCGCAAATC+CGG 0.418616 2_2:+9723585 Msa0236750:five_prime_UTR
TACGGTAGAACACCGTTTGC+GGG 0.420923 2_2:+9724736 Msa0236750:CDS
AGGCAGAAAACGACGTCGTT+GGG 0.421029 2_2:+9725003 Msa0236750:CDS
CTTCCACCTTCTCCGCGTAT+AGG 0.426656 2_2:+9723623 Msa0236750:five_prime_UTR
GCTGTTGATTGGTGGTCGTT+TGG 0.431415 2_2:+9724691 Msa0236750:CDS
AACAACCTTCATGGCGTAGA+AGG 0.436171 2_2:-9723726 None:intergenic
GGGCGAGTGCACGTAACTTC+TGG 0.440397 2_2:-9724487 None:intergenic
TTCAAGCGCGCTTGAAGGCG+TGG 0.456320 2_2:-9724818 None:intergenic
GAATTTCCAGAAGCTACTTC+CGG 0.460326 2_2:-9724658 None:intergenic
GCATAGAGACTAGGAAGAAA+AGG 0.460620 2_2:-9723827 None:intergenic
CAAATTAAGTCCTACAAAGA+AGG 0.462303 2_2:-9724935 None:intergenic
GAAAAGCTGCTTTGAGAGAC+AGG 0.464405 2_2:-9724533 None:intergenic
TCTGGTGACGATTCAACGGC+TGG 0.467162 2_2:-9724442 None:intergenic
ATCAAAACGGGGTGCGGCTG+AGG 0.472768 2_2:+9724900 Msa0236750:CDS
GGAAGGTGAGGCCGGATTTG+CGG 0.477894 2_2:-9723596 None:intergenic
AGAGATTCCGGTGAGGAGGA+TGG 0.481094 2_2:-9723528 None:intergenic
GGAGGATGGGAGGAGGTCGA+AGG 0.486221 2_2:-9723514 None:intergenic
GAGATTCCGGTGAGGAGGAT+GGG 0.490200 2_2:-9723527 None:intergenic
GAAGGAGAGACGGCTGAAGC+TGG 0.493519 2_2:-9723496 None:intergenic
TCGTTGGGTAGCGGAAATAG+AGG 0.497319 2_2:+9725018 Msa0236750:CDS
GCTGTAGACTCGGATCAAAA+CGG 0.499602 2_2:+9724887 Msa0236750:CDS
CGTATAGGTGCCGGCGACAT+AGG 0.503733 2_2:+9723638 Msa0236750:five_prime_UTR
TCATCATCAGGGGAAATGTC+TGG 0.508813 2_2:-9724460 None:intergenic
GGTTGCGATGGTGGCGGTGA+CGG 0.510358 2_2:-9723919 None:intergenic
ACTACCACTCTCTAATATGA+TGG 0.510678 2_2:-9723385 None:intergenic
TTGATCCGAGTCTACAGCTC+GGG 0.514600 2_2:-9724882 None:intergenic
AAGGCAGAAAACGACGTCGT+TGG 0.516520 2_2:+9725002 Msa0236750:CDS
GCACGGTCTTGTTCATTCGT+TGG 0.518528 2_2:+9724616 Msa0236750:CDS
AAATTAAGTCCTACAAAGAA+GGG 0.520670 2_2:-9724934 None:intergenic
GAGAGAAGCGGTTGCGATGG+TGG 0.524662 2_2:-9723928 None:intergenic
ATCATATTAGAGAGTGGTAG+TGG 0.525041 2_2:+9723387 Msa0236750:five_prime_UTR
CGGAAGTTCCTGGCTTAAGA+AGG 0.527908 2_2:+9724983 Msa0236750:CDS
CCGGTGAGGAGGATGGGAGG+AGG 0.529475 2_2:-9723521 None:intergenic
CACATGGTAACGCTGTTGAT+TGG 0.530482 2_2:+9724680 Msa0236750:CDS
GAAGTCACGGAAGGTGAGGC+CGG 0.537513 2_2:-9723604 None:intergenic
GTACGGTAGAACACCGTTTG+CGG 0.538269 2_2:+9724735 Msa0236750:CDS
GCGCTTGAAGGCGTGGCTGT+AGG 0.538332 2_2:-9724811 None:intergenic
CACTTCCTTCTACGCCATGA+AGG 0.538609 2_2:+9723721 Msa0236750:exon
TACACACGAGTATGTTTCAC+CGG 0.540961 2_2:+9724639 Msa0236750:CDS
TTTGAGAATCTAACGTTGGC+CGG 0.542069 2_2:+9725079 Msa0236750:exon
ATTCCGGTGAGGAGGATGGG+AGG 0.543106 2_2:-9723524 None:intergenic
CGCGGAGAAGGTGGAAGTCA+CGG 0.544540 2_2:-9723617 None:intergenic
GATTCGGATGGTTATGCCGC+CGG 0.547211 2_2:+9724963 Msa0236750:CDS
TGTTAAGCAAACGCGACACT+AGG 0.547498 2_2:-9724855 None:intergenic
GGTGAGGCCGGATTTGCGGA+TGG 0.550138 2_2:-9723592 None:intergenic
ACTCGGATCAAAACGGGGTG+CGG 0.550179 2_2:+9724894 Msa0236750:CDS
TGCTTTGAGAGACAGGCAAA+GGG 0.550519 2_2:-9724526 None:intergenic
TAATTTGGCGTTGATTCGGA+TGG 0.551860 2_2:+9724951 Msa0236750:CDS
CCTTCTCCGCGTATAGGTGC+CGG 0.552271 2_2:+9723629 Msa0236750:five_prime_UTR
CCTCCTCCCATCCTCCTCAC+CGG 0.555307 2_2:+9723521 Msa0236750:five_prime_UTR
ATTCAACGGCTGGGATTGCG+TGG 0.555752 2_2:-9724432 None:intergenic
GATGGCGGTGTAAGCGAAGT+CGG 0.556423 2_2:-9723574 None:intergenic
TAATGAAGTTCGCTGTGTGT+TGG 0.558554 2_2:-9723445 None:intergenic
TGGAATATTCATCTACGAGA+TGG 0.558858 2_2:+9724711 Msa0236750:CDS
ATCGTAGAGGAGTTCATTTG+CGG 0.560259 2_2:-9723693 None:intergenic
GAACAAGACCGTGCTTCCAC+CGG 0.560840 2_2:-9724607 None:intergenic
GTTCATTTGCGGAGGAGTCA+CGG 0.561135 2_2:-9723682 None:intergenic
TCGTTTGTAGGACCCGCAAA+CGG 0.563467 2_2:-9724748 None:intergenic
AAAGAGAGAAGCGGTTGCGA+TGG 0.564790 2_2:-9723931 None:intergenic
CCGGCACCTATACGCGGAGA+AGG 0.569226 2_2:-9723629 None:intergenic
TAAGTCCTACAAAGAAGGGG+TGG 0.569260 2_2:-9724930 None:intergenic
AATGTCTGGTGACGATTCAA+CGG 0.570518 2_2:-9724446 None:intergenic
TAGCTGAACCGGTGGAAGCA+CGG 0.572682 2_2:+9724599 Msa0236750:CDS
TTCATCTACGAGATGGTGTA+CGG 0.573129 2_2:+9724718 Msa0236750:CDS
GCACCTATACGCGGAGAAGG+TGG 0.581559 2_2:-9723626 None:intergenic
GGCTGAAGTACTGGTGGCAT+TGG 0.582308 2_2:+9724300 Msa0236750:CDS
CTGCTTTGAGAGACAGGCAA+AGG 0.585713 2_2:-9724527 None:intergenic
AGGAGTCACGGAGGCGACAG+AGG 0.586929 2_2:-9723670 None:intergenic
AAAACGACGTCGTTGGGTAG+CGG 0.589435 2_2:+9725009 Msa0236750:CDS
GGAGAGAGATTCCGGTGAGG+AGG 0.589518 2_2:-9723532 None:intergenic
GGAGGAGGTCGAAGGAGAGA+CGG 0.589842 2_2:-9723506 None:intergenic
CTTCTGGTGCATCATCATCA+GGG 0.590728 2_2:-9724471 None:intergenic
GGAAAACGTGTTAGTCAGAT+CGG 0.593313 2_2:+9724366 Msa0236750:CDS
GTAAACCGTGCCTATGTCGC+CGG 0.597296 2_2:-9723648 None:intergenic
GGTGGAAGTCACGGAAGGTG+AGG 0.600595 2_2:-9723608 None:intergenic
ATGGTAACGCTGTTGATTGG+TGG 0.602298 2_2:+9724683 Msa0236750:CDS
GCTTCTCTCTTTCATCAGCA+AGG 0.605644 2_2:+9723942 Msa0236750:CDS
AAGTAATCAAACGACGACGC+TGG 0.610435 2_2:-9725057 None:intergenic
AGAAGCGGTTGCGATGGTGG+CGG 0.610467 2_2:-9723925 None:intergenic
TCAAATTCAGCATAGAGACT+AGG 0.611689 2_2:-9723836 None:intergenic
CTGGTGACGATTCAACGGCT+GGG 0.613066 2_2:-9724441 None:intergenic
AATCTACAGAGATTTAAAGC+CGG 0.618926 2_2:+9724345 Msa0236750:CDS
TTTGATCCGAGTCTACAGCT+CGG 0.621926 2_2:-9724883 None:intergenic
GTAGAGGAGTTCATTTGCGG+AGG 0.626480 2_2:-9723690 None:intergenic
AAAGACCCGAGCTGTAGACT+CGG 0.627588 2_2:+9724877 Msa0236750:CDS
GAGAGAGTGCAAATCTCCAC+CGG 0.628323 2_2:-9723897 None:intergenic
AAGTCCTACAAAGAAGGGGT+GGG 0.634373 2_2:-9724929 None:intergenic
TGCTCCATCATATTAGAGAG+TGG 0.643848 2_2:+9723381 Msa0236750:five_prime_UTR
AGGAAGTGTTATCATCGTAG+AGG 0.645812 2_2:-9723706 None:intergenic
TTCTGGTGCATCATCATCAG+GGG 0.650193 2_2:-9724470 None:intergenic
TTATGCGGCTGAAGTACTGG+TGG 0.651339 2_2:+9724294 Msa0236750:CDS
AACGTGTTAGTCAGATCGGA+CGG 0.655880 2_2:+9724370 Msa0236750:CDS
TTCAACGGCTGGGATTGCGT+GGG 0.657527 2_2:-9724431 None:intergenic
AAGGGAGTTGATATGGAACG+TGG 0.658323 2_2:-9724508 None:intergenic
TGTAAGCGAAGTCGGAGGAG+CGG 0.659359 2_2:-9723566 None:intergenic
GAGAAGGTGGAAGTCACGGA+AGG 0.659853 2_2:-9723613 None:intergenic
AATTAAGTCCTACAAAGAAG+GGG 0.666955 2_2:-9724933 None:intergenic
GTAGCTTCTGGAAATTCACA+TGG 0.674583 2_2:+9724664 Msa0236750:CDS
GTGGCTGTAGGAAAACATAG+AGG 0.683767 2_2:-9724799 None:intergenic
AGGTGCCGGCGACATAGGCA+CGG 0.686515 2_2:+9723643 Msa0236750:five_prime_UTR
CAGCGAACTTCATTAAGCAG+CGG 0.686571 2_2:+9723453 Msa0236750:five_prime_UTR
CTACAAACGAAGCAACGTTG+CGG 0.690186 2_2:+9724761 Msa0236750:CDS
CTTAAGCCAGGAACTTCCGG+CGG 0.690945 2_2:-9724979 None:intergenic
AGGGAGTTGATATGGAACGT+GGG 0.691464 2_2:-9724507 None:intergenic
AGATGCACCGACCGTACACG+TGG 0.692929 2_2:-9725110 None:intergenic
ATGTCGCCGGCACCTATACG+CGG 0.696095 2_2:-9723635 None:intergenic
GGCGGTGTAAGCGAAGTCGG+AGG 0.697109 2_2:-9723571 None:intergenic
GAGGCCGGATTTGCGGATGG+CGG 0.698175 2_2:-9723589 None:intergenic
GCGAAGTCGGAGGAGCGGTG+AGG 0.701596 2_2:-9723561 None:intergenic
TGTAGACTCGGATCAAAACG+GGG 0.708562 2_2:+9724889 Msa0236750:CDS
TTGCTGATGAAAGAGAGAAG+CGG 0.723476 2_2:-9723940 None:intergenic
GATGGAGAGAGATTCCGGTG+AGG 0.731793 2_2:-9723535 None:intergenic
CATTTGCGGAGGAGTCACGG+AGG 0.796321 2_2:-9723679 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAACAAATATCATAGAAAT+TGG - chr2_2:9723358-9723377 None:intergenic 20.0%
!! TCAACAAATATCATAGAAAT+TGG - chr2_2:9723358-9723377 None:intergenic 20.0%
! AATAGAGAAAAGAACAAAAG+AGG - chr2_2:9723974-9723993 None:intergenic 25.0%
! TTGTTGTATATGACTTACTT+TGG - chr2_2:9724060-9724079 None:intergenic 25.0%
!!! TCCAACTACGTATTTTTTTA+AGG + chr2_2:9724201-9724220 Msa0236750:intron 25.0%
! TCCTTAAAAAAATACGTAGT+TGG - chr2_2:9724205-9724224 None:intergenic 25.0%
!! ATGGTTGATATTATTGTTAC+AGG + chr2_2:9724269-9724288 Msa0236750:intron 25.0%
!!! TTATTGTTACAGGTTTTATG+CGG + chr2_2:9724279-9724298 Msa0236750:intron 25.0%
! TTCAATCATTTCAATCAAAC+CGG + chr2_2:9724569-9724588 Msa0236750:CDS 25.0%
! AAATTAAGTCCTACAAAGAA+GGG - chr2_2:9724937-9724956 None:intergenic 25.0%
! AATAGAGAAAAGAACAAAAG+AGG - chr2_2:9723974-9723993 None:intergenic 25.0%
! TTGTTGTATATGACTTACTT+TGG - chr2_2:9724060-9724079 None:intergenic 25.0%
!!! TCCAACTACGTATTTTTTTA+AGG + chr2_2:9724201-9724220 Msa0236750:intron 25.0%
! TCCTTAAAAAAATACGTAGT+TGG - chr2_2:9724205-9724224 None:intergenic 25.0%
!! ATGGTTGATATTATTGTTAC+AGG + chr2_2:9724269-9724288 Msa0236750:intron 25.0%
!!! TTATTGTTACAGGTTTTATG+CGG + chr2_2:9724279-9724298 Msa0236750:intron 25.0%
! TTCAATCATTTCAATCAAAC+CGG + chr2_2:9724569-9724588 Msa0236750:CDS 25.0%
! AAATTAAGTCCTACAAAGAA+GGG - chr2_2:9724937-9724956 None:intergenic 25.0%
TAAGAAAAAGTCACATAGAG+CGG + chr2_2:9723769-9723788 Msa0236750:CDS 30.0%
TCATTTCTCTTGCATTGTTA+TGG + chr2_2:9723865-9723884 Msa0236750:CDS 30.0%
!!! ATTGTTATGGAGTTTTGTTC+CGG + chr2_2:9723878-9723897 Msa0236750:CDS 30.0%
GTTTACAAGTACTACATCTT+CGG - chr2_2:9724139-9724158 None:intergenic 30.0%
! AATCTACAGAGATTTAAAGC+CGG + chr2_2:9724345-9724364 Msa0236750:CDS 30.0%
! ATGATTGAACCTTTTTAGAC+CGG - chr2_2:9724558-9724577 None:intergenic 30.0%
AATTAAGTCCTACAAAGAAG+GGG - chr2_2:9724936-9724955 None:intergenic 30.0%
CAAATTAAGTCCTACAAAGA+AGG - chr2_2:9724938-9724957 None:intergenic 30.0%
CTTCTTTGTAGGACTTAATT+TGG + chr2_2:9724936-9724955 Msa0236750:CDS 30.0%
!! TACTTTTGAGAATCTAACGT+TGG + chr2_2:9725075-9725094 Msa0236750:exon 30.0%
TAAGAAAAAGTCACATAGAG+CGG + chr2_2:9723769-9723788 Msa0236750:CDS 30.0%
TCATTTCTCTTGCATTGTTA+TGG + chr2_2:9723865-9723884 Msa0236750:CDS 30.0%
!!! ATTGTTATGGAGTTTTGTTC+CGG + chr2_2:9723878-9723897 Msa0236750:CDS 30.0%
GTTTACAAGTACTACATCTT+CGG - chr2_2:9724139-9724158 None:intergenic 30.0%
! AATCTACAGAGATTTAAAGC+CGG + chr2_2:9724345-9724364 Msa0236750:CDS 30.0%
! ATGATTGAACCTTTTTAGAC+CGG - chr2_2:9724558-9724577 None:intergenic 30.0%
AATTAAGTCCTACAAAGAAG+GGG - chr2_2:9724936-9724955 None:intergenic 30.0%
CAAATTAAGTCCTACAAAGA+AGG - chr2_2:9724938-9724957 None:intergenic 30.0%
CTTCTTTGTAGGACTTAATT+TGG + chr2_2:9724936-9724955 Msa0236750:CDS 30.0%
!! TACTTTTGAGAATCTAACGT+TGG + chr2_2:9725075-9725094 Msa0236750:exon 30.0%
ACTACCACTCTCTAATATGA+TGG - chr2_2:9723388-9723407 None:intergenic 35.0%
ATCATATTAGAGAGTGGTAG+TGG + chr2_2:9723387-9723406 Msa0236750:five_prime_UTR 35.0%
GTCTTTATCAACAACCTTCA+TGG - chr2_2:9723738-9723757 None:intergenic 35.0%
TCAAATTCAGCATAGAGACT+AGG - chr2_2:9723839-9723858 None:intergenic 35.0%
AGAGAAAAGAACAAAAGAGG+TGG - chr2_2:9723971-9723990 None:intergenic 35.0%
! TTGGAGTATCTTCACATGTT+AGG + chr2_2:9724319-9724338 Msa0236750:CDS 35.0%
TGGAATATTCATCTACGAGA+TGG + chr2_2:9724711-9724730 Msa0236750:CDS 35.0%
!! GACTTAATTTGGCGTTGATT+CGG + chr2_2:9724947-9724966 Msa0236750:CDS 35.0%
ACTACCACTCTCTAATATGA+TGG - chr2_2:9723388-9723407 None:intergenic 35.0%
ATCATATTAGAGAGTGGTAG+TGG + chr2_2:9723387-9723406 Msa0236750:five_prime_UTR 35.0%
GTCTTTATCAACAACCTTCA+TGG - chr2_2:9723738-9723757 None:intergenic 35.0%
TCAAATTCAGCATAGAGACT+AGG - chr2_2:9723839-9723858 None:intergenic 35.0%
AGAGAAAAGAACAAAAGAGG+TGG - chr2_2:9723971-9723990 None:intergenic 35.0%
! TTGGAGTATCTTCACATGTT+AGG + chr2_2:9724319-9724338 Msa0236750:CDS 35.0%
TGGAATATTCATCTACGAGA+TGG + chr2_2:9724711-9724730 Msa0236750:CDS 35.0%
!! GACTTAATTTGGCGTTGATT+CGG + chr2_2:9724947-9724966 Msa0236750:CDS 35.0%
TGCTCCATCATATTAGAGAG+TGG + chr2_2:9723381-9723400 Msa0236750:five_prime_UTR 40.0%
TAATGAAGTTCGCTGTGTGT+TGG - chr2_2:9723448-9723467 None:intergenic 40.0%
ATCGTAGAGGAGTTCATTTG+CGG - chr2_2:9723696-9723715 None:intergenic 40.0%
!! AGGAAGTGTTATCATCGTAG+AGG - chr2_2:9723709-9723728 None:intergenic 40.0%
AAAGTCACATAGAGCGGAAA+TGG + chr2_2:9723775-9723794 Msa0236750:CDS 40.0%
GCATAGAGACTAGGAAGAAA+AGG - chr2_2:9723830-9723849 None:intergenic 40.0%
TTGCTGATGAAAGAGAGAAG+CGG - chr2_2:9723943-9723962 None:intergenic 40.0%
TAACACCTGTAAACGTTGAG+AGG + chr2_2:9724094-9724113 Msa0236750:intron 40.0%
! GATCTGACTAACACGTTTTC+CGG - chr2_2:9724367-9724386 None:intergenic 40.0%
GGAAAACGTGTTAGTCAGAT+CGG + chr2_2:9724366-9724385 Msa0236750:CDS 40.0%
! AATGTCTGGTGACGATTCAA+CGG - chr2_2:9724449-9724468 None:intergenic 40.0%
TACACACGAGTATGTTTCAC+CGG + chr2_2:9724639-9724658 Msa0236750:CDS 40.0%
GAATTTCCAGAAGCTACTTC+CGG - chr2_2:9724661-9724680 None:intergenic 40.0%
! GTAGCTTCTGGAAATTCACA+TGG + chr2_2:9724664-9724683 Msa0236750:CDS 40.0%
TTCATCTACGAGATGGTGTA+CGG + chr2_2:9724718-9724737 Msa0236750:CDS 40.0%
!! TAATTTGGCGTTGATTCGGA+TGG + chr2_2:9724951-9724970 Msa0236750:CDS 40.0%
TTTGAGAATCTAACGTTGGC+CGG + chr2_2:9725079-9725098 Msa0236750:exon 40.0%
TGCTCCATCATATTAGAGAG+TGG + chr2_2:9723381-9723400 Msa0236750:five_prime_UTR 40.0%
TAATGAAGTTCGCTGTGTGT+TGG - chr2_2:9723448-9723467 None:intergenic 40.0%
ATCGTAGAGGAGTTCATTTG+CGG - chr2_2:9723696-9723715 None:intergenic 40.0%
!! AGGAAGTGTTATCATCGTAG+AGG - chr2_2:9723709-9723728 None:intergenic 40.0%
AAAGTCACATAGAGCGGAAA+TGG + chr2_2:9723775-9723794 Msa0236750:CDS 40.0%
GCATAGAGACTAGGAAGAAA+AGG - chr2_2:9723830-9723849 None:intergenic 40.0%
TTGCTGATGAAAGAGAGAAG+CGG - chr2_2:9723943-9723962 None:intergenic 40.0%
TAACACCTGTAAACGTTGAG+AGG + chr2_2:9724094-9724113 Msa0236750:intron 40.0%
! GATCTGACTAACACGTTTTC+CGG - chr2_2:9724367-9724386 None:intergenic 40.0%
GGAAAACGTGTTAGTCAGAT+CGG + chr2_2:9724366-9724385 Msa0236750:CDS 40.0%
! AATGTCTGGTGACGATTCAA+CGG - chr2_2:9724449-9724468 None:intergenic 40.0%
TACACACGAGTATGTTTCAC+CGG + chr2_2:9724639-9724658 Msa0236750:CDS 40.0%
GAATTTCCAGAAGCTACTTC+CGG - chr2_2:9724661-9724680 None:intergenic 40.0%
! GTAGCTTCTGGAAATTCACA+TGG + chr2_2:9724664-9724683 Msa0236750:CDS 40.0%
TTCATCTACGAGATGGTGTA+CGG + chr2_2:9724718-9724737 Msa0236750:CDS 40.0%
!! TAATTTGGCGTTGATTCGGA+TGG + chr2_2:9724951-9724970 Msa0236750:CDS 40.0%
TTTGAGAATCTAACGTTGGC+CGG + chr2_2:9725079-9725098 Msa0236750:exon 40.0%
CAGCGAACTTCATTAAGCAG+CGG + chr2_2:9723453-9723472 Msa0236750:five_prime_UTR 45.0%
GGTTTGATGGAGAGAGATTC+CGG - chr2_2:9723543-9723562 None:intergenic 45.0%
AACAACCTTCATGGCGTAGA+AGG - chr2_2:9723729-9723748 None:intergenic 45.0%
!!! GTTATGGAGTTTTGTTCCGG+TGG + chr2_2:9723881-9723900 Msa0236750:CDS 45.0%
GCTTCTCTCTTTCATCAGCA+AGG + chr2_2:9723942-9723961 Msa0236750:CDS 45.0%
! GTTTTATGCGGCTGAAGTAC+TGG + chr2_2:9724291-9724310 Msa0236750:CDS 45.0%
AACGTGTTAGTCAGATCGGA+CGG + chr2_2:9724370-9724389 Msa0236750:CDS 45.0%
TCATCATCAGGGGAAATGTC+TGG - chr2_2:9724463-9724482 None:intergenic 45.0%
TTCTGGTGCATCATCATCAG+GGG - chr2_2:9724473-9724492 None:intergenic 45.0%
CTTCTGGTGCATCATCATCA+GGG - chr2_2:9724474-9724493 None:intergenic 45.0%
ACTTCTGGTGCATCATCATC+AGG - chr2_2:9724475-9724494 None:intergenic 45.0%
!! AGGGAGTTGATATGGAACGT+GGG - chr2_2:9724510-9724529 None:intergenic 45.0%
!! AAGGGAGTTGATATGGAACG+TGG - chr2_2:9724511-9724530 None:intergenic 45.0%
!! ACAGGCAAAGGGAGTTGATA+TGG - chr2_2:9724518-9724537 None:intergenic 45.0%
!! TGCTTTGAGAGACAGGCAAA+GGG - chr2_2:9724529-9724548 None:intergenic 45.0%
!! GAAAAGCTGCTTTGAGAGAC+AGG - chr2_2:9724536-9724555 None:intergenic 45.0%
! GTCTCTCAAAGCAGCTTTTC+CGG + chr2_2:9724536-9724555 Msa0236750:CDS 45.0%
! GCAGCTTTTCCGGTCTAAAA+AGG + chr2_2:9724546-9724565 Msa0236750:CDS 45.0%
! CACATGGTAACGCTGTTGAT+TGG + chr2_2:9724680-9724699 Msa0236750:CDS 45.0%
! ATGGTAACGCTGTTGATTGG+TGG + chr2_2:9724683-9724702 Msa0236750:CDS 45.0%
CTACAAACGAAGCAACGTTG+CGG + chr2_2:9724761-9724780 Msa0236750:CDS 45.0%
GTGGCTGTAGGAAAACATAG+AGG - chr2_2:9724802-9724821 None:intergenic 45.0%
TGTTAAGCAAACGCGACACT+AGG - chr2_2:9724858-9724877 None:intergenic 45.0%
TTTGATCCGAGTCTACAGCT+CGG - chr2_2:9724886-9724905 None:intergenic 45.0%
GCTGTAGACTCGGATCAAAA+CGG + chr2_2:9724887-9724906 Msa0236750:CDS 45.0%
CTGTAGACTCGGATCAAAAC+GGG + chr2_2:9724888-9724907 Msa0236750:CDS 45.0%
TGTAGACTCGGATCAAAACG+GGG + chr2_2:9724889-9724908 Msa0236750:CDS 45.0%
AAGTCCTACAAAGAAGGGGT+GGG - chr2_2:9724932-9724951 None:intergenic 45.0%
TAAGTCCTACAAAGAAGGGG+TGG - chr2_2:9724933-9724952 None:intergenic 45.0%
CTTCTTAAGCCAGGAACTTC+CGG - chr2_2:9724985-9725004 None:intergenic 45.0%
! GTTTTCTGCCTTCTTAAGCC+AGG - chr2_2:9724994-9725013 None:intergenic 45.0%
AAGTAATCAAACGACGACGC+TGG - chr2_2:9725060-9725079 None:intergenic 45.0%
CAGCGAACTTCATTAAGCAG+CGG + chr2_2:9723453-9723472 Msa0236750:five_prime_UTR 45.0%
GGTTTGATGGAGAGAGATTC+CGG - chr2_2:9723543-9723562 None:intergenic 45.0%
AACAACCTTCATGGCGTAGA+AGG - chr2_2:9723729-9723748 None:intergenic 45.0%
!!! GTTATGGAGTTTTGTTCCGG+TGG + chr2_2:9723881-9723900 Msa0236750:CDS 45.0%
GCTTCTCTCTTTCATCAGCA+AGG + chr2_2:9723942-9723961 Msa0236750:CDS 45.0%
! GTTTTATGCGGCTGAAGTAC+TGG + chr2_2:9724291-9724310 Msa0236750:CDS 45.0%
AACGTGTTAGTCAGATCGGA+CGG + chr2_2:9724370-9724389 Msa0236750:CDS 45.0%
TCATCATCAGGGGAAATGTC+TGG - chr2_2:9724463-9724482 None:intergenic 45.0%
TTCTGGTGCATCATCATCAG+GGG - chr2_2:9724473-9724492 None:intergenic 45.0%
CTTCTGGTGCATCATCATCA+GGG - chr2_2:9724474-9724493 None:intergenic 45.0%
ACTTCTGGTGCATCATCATC+AGG - chr2_2:9724475-9724494 None:intergenic 45.0%
!! AGGGAGTTGATATGGAACGT+GGG - chr2_2:9724510-9724529 None:intergenic 45.0%
!! AAGGGAGTTGATATGGAACG+TGG - chr2_2:9724511-9724530 None:intergenic 45.0%
!! ACAGGCAAAGGGAGTTGATA+TGG - chr2_2:9724518-9724537 None:intergenic 45.0%
!! TGCTTTGAGAGACAGGCAAA+GGG - chr2_2:9724529-9724548 None:intergenic 45.0%
!! GAAAAGCTGCTTTGAGAGAC+AGG - chr2_2:9724536-9724555 None:intergenic 45.0%
! GTCTCTCAAAGCAGCTTTTC+CGG + chr2_2:9724536-9724555 Msa0236750:CDS 45.0%
! GCAGCTTTTCCGGTCTAAAA+AGG + chr2_2:9724546-9724565 Msa0236750:CDS 45.0%
! CACATGGTAACGCTGTTGAT+TGG + chr2_2:9724680-9724699 Msa0236750:CDS 45.0%
! ATGGTAACGCTGTTGATTGG+TGG + chr2_2:9724683-9724702 Msa0236750:CDS 45.0%
CTACAAACGAAGCAACGTTG+CGG + chr2_2:9724761-9724780 Msa0236750:CDS 45.0%
GTGGCTGTAGGAAAACATAG+AGG - chr2_2:9724802-9724821 None:intergenic 45.0%
TGTTAAGCAAACGCGACACT+AGG - chr2_2:9724858-9724877 None:intergenic 45.0%
TTTGATCCGAGTCTACAGCT+CGG - chr2_2:9724886-9724905 None:intergenic 45.0%
GCTGTAGACTCGGATCAAAA+CGG + chr2_2:9724887-9724906 Msa0236750:CDS 45.0%
CTGTAGACTCGGATCAAAAC+GGG + chr2_2:9724888-9724907 Msa0236750:CDS 45.0%
TGTAGACTCGGATCAAAACG+GGG + chr2_2:9724889-9724908 Msa0236750:CDS 45.0%
AAGTCCTACAAAGAAGGGGT+GGG - chr2_2:9724932-9724951 None:intergenic 45.0%
TAAGTCCTACAAAGAAGGGG+TGG - chr2_2:9724933-9724952 None:intergenic 45.0%
CTTCTTAAGCCAGGAACTTC+CGG - chr2_2:9724985-9725004 None:intergenic 45.0%
! GTTTTCTGCCTTCTTAAGCC+AGG - chr2_2:9724994-9725013 None:intergenic 45.0%
AAGTAATCAAACGACGACGC+TGG - chr2_2:9725060-9725079 None:intergenic 45.0%
!! TCAATTAAAAATAAATTAAA+TGG + chr2_2:9724250-9724269 Msa0236750:intron 5.0%
!! TCAATTAAAAATAAATTAAA+TGG + chr2_2:9724250-9724269 Msa0236750:intron 5.0%
!! AGTGGTAGTGGACGTGATTC+TGG + chr2_2:9723399-9723418 Msa0236750:five_prime_UTR 50.0%
GTTCATTTGCGGAGGAGTCA+CGG - chr2_2:9723685-9723704 None:intergenic 50.0%
GTAGAGGAGTTCATTTGCGG+AGG - chr2_2:9723693-9723712 None:intergenic 50.0%
CACTTCCTTCTACGCCATGA+AGG + chr2_2:9723721-9723740 Msa0236750:exon 50.0%
! GAGAGAGTGCAAATCTCCAC+CGG - chr2_2:9723900-9723919 None:intergenic 50.0%
AAAGAGAGAAGCGGTTGCGA+TGG - chr2_2:9723934-9723953 None:intergenic 50.0%
CAACGCCTCTCAACGTTTAC+AGG - chr2_2:9724102-9724121 None:intergenic 50.0%
GTCGAACATGACATGACTCG+AGG - chr2_2:9724165-9724184 None:intergenic 50.0%
!! TTATGCGGCTGAAGTACTGG+TGG + chr2_2:9724294-9724313 Msa0236750:CDS 50.0%
!! CTGCTTTGAGAGACAGGCAA+AGG - chr2_2:9724530-9724549 None:intergenic 50.0%
CCGGTTCAGCTACAAAAAGC+CGG - chr2_2:9724591-9724610 None:intergenic 50.0%
! CCGGCTTTTTGTAGCTGAAC+CGG + chr2_2:9724588-9724607 Msa0236750:CDS 50.0%
! GCTTTTTGTAGCTGAACCGG+TGG + chr2_2:9724591-9724610 Msa0236750:CDS 50.0%
!! GCACGGTCTTGTTCATTCGT+TGG + chr2_2:9724616-9724635 Msa0236750:CDS 50.0%
GTTTCACCGGAAGTAGCTTC+TGG + chr2_2:9724652-9724671 Msa0236750:CDS 50.0%
! GCTGTTGATTGGTGGTCGTT+TGG + chr2_2:9724691-9724710 Msa0236750:CDS 50.0%
GTACGGTAGAACACCGTTTG+CGG + chr2_2:9724735-9724754 Msa0236750:CDS 50.0%
TACGGTAGAACACCGTTTGC+GGG + chr2_2:9724736-9724755 Msa0236750:CDS 50.0%
TCGTTTGTAGGACCCGCAAA+CGG - chr2_2:9724751-9724770 None:intergenic 50.0%
CGCAACGTTGCTTCGTTTGT+AGG - chr2_2:9724763-9724782 None:intergenic 50.0%
TGCATTTCAAGCGCGCTTGA+AGG - chr2_2:9724826-9724845 None:intergenic 50.0%
AAAGACCCGAGCTGTAGACT+CGG + chr2_2:9724877-9724896 Msa0236750:CDS 50.0%
TTGATCCGAGTCTACAGCTC+GGG - chr2_2:9724885-9724904 None:intergenic 50.0%
AAGTCCCACCCCTTCTTTGT+AGG + chr2_2:9724925-9724944 Msa0236750:CDS 50.0%
CGGAAGTTCCTGGCTTAAGA+AGG + chr2_2:9724983-9725002 Msa0236750:CDS 50.0%
AAGGCAGAAAACGACGTCGT+TGG + chr2_2:9725002-9725021 Msa0236750:CDS 50.0%
AGGCAGAAAACGACGTCGTT+GGG + chr2_2:9725003-9725022 Msa0236750:CDS 50.0%
AAAACGACGTCGTTGGGTAG+CGG + chr2_2:9725009-9725028 Msa0236750:CDS 50.0%
!! TCGTTGGGTAGCGGAAATAG+AGG + chr2_2:9725018-9725037 Msa0236750:CDS 50.0%
CGTACACGTGGCGTAAAAAC+CGG - chr2_2:9725101-9725120 None:intergenic 50.0%
! CGGTTTTTACGCCACGTGTA+CGG + chr2_2:9725099-9725118 Msa0236750:three_prime_UTR 50.0%
! TTTTACGCCACGTGTACGGT+CGG + chr2_2:9725103-9725122 Msa0236750:three_prime_UTR 50.0%
! TGCGTTGAGAGAGAGAGTGT+TGG - chr2_2:9723272-9723291 None:intergenic 50.0%
!! AGTGGTAGTGGACGTGATTC+TGG + chr2_2:9723399-9723418 Msa0236750:five_prime_UTR 50.0%
GTTCATTTGCGGAGGAGTCA+CGG - chr2_2:9723685-9723704 None:intergenic 50.0%
GTAGAGGAGTTCATTTGCGG+AGG - chr2_2:9723693-9723712 None:intergenic 50.0%
CACTTCCTTCTACGCCATGA+AGG + chr2_2:9723721-9723740 Msa0236750:exon 50.0%
! GAGAGAGTGCAAATCTCCAC+CGG - chr2_2:9723900-9723919 None:intergenic 50.0%
AAAGAGAGAAGCGGTTGCGA+TGG - chr2_2:9723934-9723953 None:intergenic 50.0%
CAACGCCTCTCAACGTTTAC+AGG - chr2_2:9724102-9724121 None:intergenic 50.0%
GTCGAACATGACATGACTCG+AGG - chr2_2:9724165-9724184 None:intergenic 50.0%
!! TTATGCGGCTGAAGTACTGG+TGG + chr2_2:9724294-9724313 Msa0236750:CDS 50.0%
!! CTGCTTTGAGAGACAGGCAA+AGG - chr2_2:9724530-9724549 None:intergenic 50.0%
CCGGTTCAGCTACAAAAAGC+CGG - chr2_2:9724591-9724610 None:intergenic 50.0%
! CCGGCTTTTTGTAGCTGAAC+CGG + chr2_2:9724588-9724607 Msa0236750:CDS 50.0%
! GCTTTTTGTAGCTGAACCGG+TGG + chr2_2:9724591-9724610 Msa0236750:CDS 50.0%
!! GCACGGTCTTGTTCATTCGT+TGG + chr2_2:9724616-9724635 Msa0236750:CDS 50.0%
GTTTCACCGGAAGTAGCTTC+TGG + chr2_2:9724652-9724671 Msa0236750:CDS 50.0%
! GCTGTTGATTGGTGGTCGTT+TGG + chr2_2:9724691-9724710 Msa0236750:CDS 50.0%
GTACGGTAGAACACCGTTTG+CGG + chr2_2:9724735-9724754 Msa0236750:CDS 50.0%
TACGGTAGAACACCGTTTGC+GGG + chr2_2:9724736-9724755 Msa0236750:CDS 50.0%
TCGTTTGTAGGACCCGCAAA+CGG - chr2_2:9724751-9724770 None:intergenic 50.0%
CGCAACGTTGCTTCGTTTGT+AGG - chr2_2:9724763-9724782 None:intergenic 50.0%
TGCATTTCAAGCGCGCTTGA+AGG - chr2_2:9724826-9724845 None:intergenic 50.0%
AAAGACCCGAGCTGTAGACT+CGG + chr2_2:9724877-9724896 Msa0236750:CDS 50.0%
TTGATCCGAGTCTACAGCTC+GGG - chr2_2:9724885-9724904 None:intergenic 50.0%
AAGTCCCACCCCTTCTTTGT+AGG + chr2_2:9724925-9724944 Msa0236750:CDS 50.0%
CGGAAGTTCCTGGCTTAAGA+AGG + chr2_2:9724983-9725002 Msa0236750:CDS 50.0%
AAGGCAGAAAACGACGTCGT+TGG + chr2_2:9725002-9725021 Msa0236750:CDS 50.0%
AGGCAGAAAACGACGTCGTT+GGG + chr2_2:9725003-9725022 Msa0236750:CDS 50.0%
AAAACGACGTCGTTGGGTAG+CGG + chr2_2:9725009-9725028 Msa0236750:CDS 50.0%
!! TCGTTGGGTAGCGGAAATAG+AGG + chr2_2:9725018-9725037 Msa0236750:CDS 50.0%
CGTACACGTGGCGTAAAAAC+CGG - chr2_2:9725101-9725120 None:intergenic 50.0%
! CGGTTTTTACGCCACGTGTA+CGG + chr2_2:9725099-9725118 Msa0236750:three_prime_UTR 50.0%
! TTTTACGCCACGTGTACGGT+CGG + chr2_2:9725103-9725122 Msa0236750:three_prime_UTR 50.0%
GAGATTCCGGTGAGGAGGAT+GGG - chr2_2:9723530-9723549 None:intergenic 55.0%
AGAGATTCCGGTGAGGAGGA+TGG - chr2_2:9723531-9723550 None:intergenic 55.0%
GATGGAGAGAGATTCCGGTG+AGG - chr2_2:9723538-9723557 None:intergenic 55.0%
TGTAAGCGAAGTCGGAGGAG+CGG - chr2_2:9723569-9723588 None:intergenic 55.0%
! GATGGCGGTGTAAGCGAAGT+CGG - chr2_2:9723577-9723596 None:intergenic 55.0%
TACACCGCCATCCGCAAATC+CGG + chr2_2:9723585-9723604 Msa0236750:five_prime_UTR 55.0%
GAGAAGGTGGAAGTCACGGA+AGG - chr2_2:9723616-9723635 None:intergenic 55.0%
CTTCCACCTTCTCCGCGTAT+AGG + chr2_2:9723623-9723642 Msa0236750:five_prime_UTR 55.0%
GTAAACCGTGCCTATGTCGC+CGG - chr2_2:9723651-9723670 None:intergenic 55.0%
!! GGCTGAAGTACTGGTGGCAT+TGG + chr2_2:9724300-9724319 Msa0236750:CDS 55.0%
TTCAACGGCTGGGATTGCGT+GGG - chr2_2:9724434-9724453 None:intergenic 55.0%
ATTCAACGGCTGGGATTGCG+TGG - chr2_2:9724435-9724454 None:intergenic 55.0%
! CTGGTGACGATTCAACGGCT+GGG - chr2_2:9724444-9724463 None:intergenic 55.0%
! TCTGGTGACGATTCAACGGC+TGG - chr2_2:9724445-9724464 None:intergenic 55.0%
TAGCTGAACCGGTGGAAGCA+CGG + chr2_2:9724599-9724618 Msa0236750:CDS 55.0%
GAACAAGACCGTGCTTCCAC+CGG - chr2_2:9724610-9724629 None:intergenic 55.0%
ACTCGGATCAAAACGGGGTG+CGG + chr2_2:9724894-9724913 Msa0236750:CDS 55.0%
GATTCGGATGGTTATGCCGC+CGG + chr2_2:9724963-9724982 Msa0236750:CDS 55.0%
CTTAAGCCAGGAACTTCCGG+CGG - chr2_2:9724982-9725001 None:intergenic 55.0%
GAGATTCCGGTGAGGAGGAT+GGG - chr2_2:9723530-9723549 None:intergenic 55.0%
AGAGATTCCGGTGAGGAGGA+TGG - chr2_2:9723531-9723550 None:intergenic 55.0%
GATGGAGAGAGATTCCGGTG+AGG - chr2_2:9723538-9723557 None:intergenic 55.0%
TGTAAGCGAAGTCGGAGGAG+CGG - chr2_2:9723569-9723588 None:intergenic 55.0%
! GATGGCGGTGTAAGCGAAGT+CGG - chr2_2:9723577-9723596 None:intergenic 55.0%
TACACCGCCATCCGCAAATC+CGG + chr2_2:9723585-9723604 Msa0236750:five_prime_UTR 55.0%
GAGAAGGTGGAAGTCACGGA+AGG - chr2_2:9723616-9723635 None:intergenic 55.0%
CTTCCACCTTCTCCGCGTAT+AGG + chr2_2:9723623-9723642 Msa0236750:five_prime_UTR 55.0%
GTAAACCGTGCCTATGTCGC+CGG - chr2_2:9723651-9723670 None:intergenic 55.0%
!! GGCTGAAGTACTGGTGGCAT+TGG + chr2_2:9724300-9724319 Msa0236750:CDS 55.0%
TTCAACGGCTGGGATTGCGT+GGG - chr2_2:9724434-9724453 None:intergenic 55.0%
ATTCAACGGCTGGGATTGCG+TGG - chr2_2:9724435-9724454 None:intergenic 55.0%
! CTGGTGACGATTCAACGGCT+GGG - chr2_2:9724444-9724463 None:intergenic 55.0%
! TCTGGTGACGATTCAACGGC+TGG - chr2_2:9724445-9724464 None:intergenic 55.0%
TAGCTGAACCGGTGGAAGCA+CGG + chr2_2:9724599-9724618 Msa0236750:CDS 55.0%
GAACAAGACCGTGCTTCCAC+CGG - chr2_2:9724610-9724629 None:intergenic 55.0%
ACTCGGATCAAAACGGGGTG+CGG + chr2_2:9724894-9724913 Msa0236750:CDS 55.0%
GATTCGGATGGTTATGCCGC+CGG + chr2_2:9724963-9724982 Msa0236750:CDS 55.0%
CTTAAGCCAGGAACTTCCGG+CGG - chr2_2:9724982-9725001 None:intergenic 55.0%
GAAGGAGAGACGGCTGAAGC+TGG - chr2_2:9723499-9723518 None:intergenic 60.0%
GGAGGAGGTCGAAGGAGAGA+CGG - chr2_2:9723509-9723528 None:intergenic 60.0%
ATTCCGGTGAGGAGGATGGG+AGG - chr2_2:9723527-9723546 None:intergenic 60.0%
GGAGAGAGATTCCGGTGAGG+AGG - chr2_2:9723535-9723554 None:intergenic 60.0%
GGAGGAGCGGTGAGGTTTGA+TGG - chr2_2:9723556-9723575 None:intergenic 60.0%
GGAAGGTGAGGCCGGATTTG+CGG - chr2_2:9723599-9723618 None:intergenic 60.0%
GAAGTCACGGAAGGTGAGGC+CGG - chr2_2:9723607-9723626 None:intergenic 60.0%
GGTGGAAGTCACGGAAGGTG+AGG - chr2_2:9723611-9723630 None:intergenic 60.0%
CGCGGAGAAGGTGGAAGTCA+CGG - chr2_2:9723620-9723639 None:intergenic 60.0%
GCACCTATACGCGGAGAAGG+TGG - chr2_2:9723629-9723648 None:intergenic 60.0%
CCTTCTCCGCGTATAGGTGC+CGG + chr2_2:9723629-9723648 Msa0236750:five_prime_UTR 60.0%
ATGTCGCCGGCACCTATACG+CGG - chr2_2:9723638-9723657 None:intergenic 60.0%
!! CGTATAGGTGCCGGCGACAT+AGG + chr2_2:9723638-9723657 Msa0236750:five_prime_UTR 60.0%
CATTTGCGGAGGAGTCACGG+AGG - chr2_2:9723682-9723701 None:intergenic 60.0%
! AGAAGCGGTTGCGATGGTGG+CGG - chr2_2:9723928-9723947 None:intergenic 60.0%
GAGAGAAGCGGTTGCGATGG+TGG - chr2_2:9723931-9723950 None:intergenic 60.0%
GGGCGAGTGCACGTAACTTC+TGG - chr2_2:9724490-9724509 None:intergenic 60.0%
TTCAAGCGCGCTTGAAGGCG+TGG - chr2_2:9724821-9724840 None:intergenic 60.0%
ATCAAAACGGGGTGCGGCTG+AGG + chr2_2:9724900-9724919 Msa0236750:CDS 60.0%
GTTATGCCGCCGGAAGTTCC+TGG + chr2_2:9724973-9724992 Msa0236750:CDS 60.0%
GAAGGAGAGACGGCTGAAGC+TGG - chr2_2:9723499-9723518 None:intergenic 60.0%
GGAGGAGGTCGAAGGAGAGA+CGG - chr2_2:9723509-9723528 None:intergenic 60.0%
ATTCCGGTGAGGAGGATGGG+AGG - chr2_2:9723527-9723546 None:intergenic 60.0%
GGAGAGAGATTCCGGTGAGG+AGG - chr2_2:9723535-9723554 None:intergenic 60.0%
GGAGGAGCGGTGAGGTTTGA+TGG - chr2_2:9723556-9723575 None:intergenic 60.0%
GGAAGGTGAGGCCGGATTTG+CGG - chr2_2:9723599-9723618 None:intergenic 60.0%
GAAGTCACGGAAGGTGAGGC+CGG - chr2_2:9723607-9723626 None:intergenic 60.0%
GGTGGAAGTCACGGAAGGTG+AGG - chr2_2:9723611-9723630 None:intergenic 60.0%
CGCGGAGAAGGTGGAAGTCA+CGG - chr2_2:9723620-9723639 None:intergenic 60.0%
GCACCTATACGCGGAGAAGG+TGG - chr2_2:9723629-9723648 None:intergenic 60.0%
CCTTCTCCGCGTATAGGTGC+CGG + chr2_2:9723629-9723648 Msa0236750:five_prime_UTR 60.0%
ATGTCGCCGGCACCTATACG+CGG - chr2_2:9723638-9723657 None:intergenic 60.0%
!! CGTATAGGTGCCGGCGACAT+AGG + chr2_2:9723638-9723657 Msa0236750:five_prime_UTR 60.0%
CATTTGCGGAGGAGTCACGG+AGG - chr2_2:9723682-9723701 None:intergenic 60.0%
! AGAAGCGGTTGCGATGGTGG+CGG - chr2_2:9723928-9723947 None:intergenic 60.0%
GAGAGAAGCGGTTGCGATGG+TGG - chr2_2:9723931-9723950 None:intergenic 60.0%
GGGCGAGTGCACGTAACTTC+TGG - chr2_2:9724490-9724509 None:intergenic 60.0%
TTCAAGCGCGCTTGAAGGCG+TGG - chr2_2:9724821-9724840 None:intergenic 60.0%
ATCAAAACGGGGTGCGGCTG+AGG + chr2_2:9724900-9724919 Msa0236750:CDS 60.0%
GTTATGCCGCCGGAAGTTCC+TGG + chr2_2:9724973-9724992 Msa0236750:CDS 60.0%
GGAGGATGGGAGGAGGTCGA+AGG - chr2_2:9723517-9723536 None:intergenic 65.0%
CCTCCTCCCATCCTCCTCAC+CGG + chr2_2:9723521-9723540 Msa0236750:five_prime_UTR 65.0%
GGCGGTGTAAGCGAAGTCGG+AGG - chr2_2:9723574-9723593 None:intergenic 65.0%
GAGGCCGGATTTGCGGATGG+CGG - chr2_2:9723592-9723611 None:intergenic 65.0%
GGTGAGGCCGGATTTGCGGA+TGG - chr2_2:9723595-9723614 None:intergenic 65.0%
CCGGCACCTATACGCGGAGA+AGG - chr2_2:9723632-9723651 None:intergenic 65.0%
!! AGGTGCCGGCGACATAGGCA+CGG + chr2_2:9723643-9723662 Msa0236750:five_prime_UTR 65.0%
AGGAGTCACGGAGGCGACAG+AGG - chr2_2:9723673-9723692 None:intergenic 65.0%
!! GGTTGCGATGGTGGCGGTGA+CGG - chr2_2:9723922-9723941 None:intergenic 65.0%
! GCGCTTGAAGGCGTGGCTGT+AGG - chr2_2:9724814-9724833 None:intergenic 65.0%
GGAGGATGGGAGGAGGTCGA+AGG - chr2_2:9723517-9723536 None:intergenic 65.0%
CCTCCTCCCATCCTCCTCAC+CGG + chr2_2:9723521-9723540 Msa0236750:five_prime_UTR 65.0%
GGCGGTGTAAGCGAAGTCGG+AGG - chr2_2:9723574-9723593 None:intergenic 65.0%
GAGGCCGGATTTGCGGATGG+CGG - chr2_2:9723592-9723611 None:intergenic 65.0%
GGTGAGGCCGGATTTGCGGA+TGG - chr2_2:9723595-9723614 None:intergenic 65.0%
CCGGCACCTATACGCGGAGA+AGG - chr2_2:9723632-9723651 None:intergenic 65.0%
!! AGGTGCCGGCGACATAGGCA+CGG + chr2_2:9723643-9723662 Msa0236750:five_prime_UTR 65.0%
AGGAGTCACGGAGGCGACAG+AGG - chr2_2:9723673-9723692 None:intergenic 65.0%
!! GGTTGCGATGGTGGCGGTGA+CGG - chr2_2:9723922-9723941 None:intergenic 65.0%
! GCGCTTGAAGGCGTGGCTGT+AGG - chr2_2:9724814-9724833 None:intergenic 65.0%
CCGGTGAGGAGGATGGGAGG+AGG - chr2_2:9723524-9723543 None:intergenic 70.0%
GCGAAGTCGGAGGAGCGGTG+AGG - chr2_2:9723564-9723583 None:intergenic 70.0%
CCGGTGAGGAGGATGGGAGG+AGG - chr2_2:9723524-9723543 None:intergenic 70.0%
GCGAAGTCGGAGGAGCGGTG+AGG - chr2_2:9723564-9723583 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 9723270 9725131 9723270 ID=Msa0236750;Name=Msa0236750
chr2_2 mRNA 9723270 9725131 9723270 ID=Msa0236750-mRNA-1;Parent=Msa0236750;Name=Msa0236750-mRNA-1;_AED=0.01;_eAED=0.01;_QI=467|1|1|1|1|1|2|48|339
chr2_2 exon 9723270 9723963 9723270 ID=Msa0236750-mRNA-1:exon:4209;Parent=Msa0236750-mRNA-1
chr2_2 exon 9724291 9725131 9724291 ID=Msa0236750-mRNA-1:exon:4210;Parent=Msa0236750-mRNA-1
chr2_2 five_prime_UTR 9723270 9723736 9723270 ID=Msa0236750-mRNA-1:five_prime_utr;Parent=Msa0236750-mRNA-1
chr2_2 CDS 9723737 9723963 9723737 ID=Msa0236750-mRNA-1:cds;Parent=Msa0236750-mRNA-1
chr2_2 CDS 9724291 9725083 9724291 ID=Msa0236750-mRNA-1:cds;Parent=Msa0236750-mRNA-1
chr2_2 three_prime_UTR 9725084 9725131 9725084 ID=Msa0236750-mRNA-1:three_prime_utr;Parent=Msa0236750-mRNA-1
Gene Sequence

>Msa0236750

ATGAAGGTTGTTGATAAAGACGCTGTTGCTCTTAAGAAAAAGTCACATAGAGCGGAAATGGAGAGAAAGATTCTTAAGATGCTTGATCATCCTTTTCTTCCTAGTCTCTATGCTGAATTTGAAGCTTCTCATTTCTCTTGCATTGTTATGGAGTTTTGTTCCGGTGGAGATTTGCACTCTCTCCGTCACCGCCACCATCGCAACCGCTTCTCTCTTTCATCAGCAAGGTTTTATGCGGCTGAAGTACTGGTGGCATTGGAGTATCTTCACATGTTAGGAATAATCTACAGAGATTTAAAGCCGGAAAACGTGTTAGTCAGATCGGACGGTCACATTATGCTCTCAGATTTTGATCTCTCACTAATTTCCCACGCAATCCCAGCCGTTGAATCGTCACCAGACATTTCCCCTGATGATGATGCACCAGAAGTTACGTGCACTCGCCCACGTTCCATATCAACTCCCTTTGCCTGTCTCTCAAAGCAGCTTTTCCGGTCTAAAAAGGTTCAATCATTTCAATCAAACCGGCTTTTTGTAGCTGAACCGGTGGAAGCACGGTCTTGTTCATTCGTTGGTACACACGAGTATGTTTCACCGGAAGTAGCTTCTGGAAATTCACATGGTAACGCTGTTGATTGGTGGTCGTTTGGAATATTCATCTACGAGATGGTGTACGGTAGAACACCGTTTGCGGGTCCTACAAACGAAGCAACGTTGCGGAACATTATTAAGAAACCTCTATGTTTTCCTACAGCCACGCCTTCAAGCGCGCTTGAAATGCACGCGCGTGACCTAGTGTCGCGTTTGCTTAACAAAGACCCGAGCTGTAGACTCGGATCAAAACGGGGTGCGGCTGAGGTTAAGTCCCACCCCTTCTTTGTAGGACTTAATTTGGCGTTGATTCGGATGGTTATGCCGCCGGAAGTTCCTGGCTTAAGAAGGCAGAAAACGACGTCGTTGGGTAGCGGAAATAGAGGTTCTAGTAGACAGCAACCAGCGTCGTCGTTTGATTACTTTTGA
Protein sequence

>Msa0236750

MKVVDKDAVALKKKSHRAEMERKILKMLDHPFLPSLYAEFEASHFSCIVMEFCSGGDLHSLRHRHHRNRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLISHAIPAVESSPDISPDDDAPEVTCTRPRSISTPFACLSKQLFRSKKVQSFQSNRLFVAEPVEARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGRTPFAGPTNEATLRNIIKKPLCFPTATPSSALEMHARDLVSRLLNKDPSCRLGSKRGAAEVKSHPFFVGLNLALIRMVMPPEVPGLRRQKTTSLGSGNRGSSRQQPASSFDYF*