AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0243500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0243500 MtrunA17_Chr2g0327471 70.677 133 7 3 1 103 33 163 5.29e-49 168
Msa0243500 MtrunA17_Chr2g0327511 60.902 133 19 3 1 103 51 180 1.98e-40 145
Msa0243500 MtrunA17_Chr4g0074651 58.824 136 21 3 1 106 68 198 3.78e-37 136
Msa0243500 MtrunA17_Chr2g0327531 58.929 112 35 1 3 103 4 115 3.95e-33 125
Msa0243500 MtrunA17_Chr1g0209041 87.719 57 7 0 104 160 259 315 4.79e-31 119
Msa0243500 MtrunA17_Chr7g0263521 56.436 101 33 1 14 103 45 145 1.25e-28 113
Msa0243500 MtrunA17_Chr1g0181821 60.204 98 27 2 20 106 53 149 3.22e-28 112
Msa0243500 MtrunA17_Chr2g0286281 59.551 89 25 1 26 103 73 161 1.42e-26 108
Msa0243500 MtrunA17_Chr2g0327541 55.856 111 32 2 7 106 84 188 2.32e-26 107
Msa0243500 MtrunA17_Chr7g0275131 57.955 88 26 1 27 103 58 145 4.13e-26 108
Msa0243500 MtrunA17_Chr1g0213991 56.250 96 30 2 20 103 74 169 9.17e-25 103
Msa0243500 MtrunA17_Chr7g0237401 55.435 92 30 1 23 103 74 165 2.88e-24 101
Msa0243500 MtrunA17_Chr3g0098401 51.000 100 35 2 18 103 51 150 3.08e-23 94.4
Msa0243500 MtrunA17_Chr7g0251771 54.545 88 29 1 27 103 36 123 7.96e-23 97.4
Msa0243500 MtrunA17_Chr4g0066761 48.039 102 42 1 16 106 46 147 2.42e-21 92.8
Msa0243500 MtrunA17_Chr1g0189791 44.860 107 44 2 12 103 37 143 5.75e-21 92.8
Msa0243500 MtrunA17_Chr3g0143961 47.619 105 45 1 9 103 35 139 6.09e-21 91.7
Msa0243500 MtrunA17_Chr2g0288121 49.425 87 33 1 28 103 28 114 1.78e-20 90.1
Msa0243500 MtrunA17_Chr5g0443691 44.554 101 41 2 18 103 72 172 4.26e-20 89.7
Msa0243500 MtrunA17_Chr4g0064201 47.872 94 29 1 30 103 99 192 1.03e-17 82.8
Msa0243500 MtrunA17_Chr5g0416311 44.792 96 33 1 28 103 62 157 2.99e-17 81.3
Msa0243500 MtrunA17_Chr8g0364671 40.196 102 51 1 12 103 33 134 1.64e-16 79.0
Msa0243500 MtrunA17_Chr5g0435211 42.708 96 35 1 28 103 61 156 3.22e-16 78.6
Msa0243500 MtrunA17_Chr7g0264461 44.444 90 34 1 28 101 80 169 3.44e-16 78.6
Msa0243500 MtrunA17_Chr8g0358821 39.370 127 66 2 12 128 660 785 4.46e-16 78.6
Msa0243500 MtrunA17_Chr4g0030311 38.938 113 47 3 11 103 56 166 9.67e-16 76.3
Msa0243500 MtrunA17_Chr8g0388941 40.351 114 46 2 7 103 41 149 2.68e-15 75.5
Msa0243500 MtrunA17_Chr3g0136421 36.434 129 57 3 24 135 64 184 3.36e-15 75.1
Msa0243500 MtrunA17_Chr1g0153851 42.453 106 48 3 9 103 18 121 3.76e-15 74.7
Msa0243500 MtrunA17_Chr7g0238671 40.625 96 37 1 28 103 59 154 3.84e-15 75.1
Msa0243500 MtrunA17_Chr5g0441021 39.623 106 44 1 18 103 46 151 4.18e-15 75.1
Msa0243500 MtrunA17_Chr4g0030471 40.741 108 49 2 11 103 51 158 5.12e-15 74.7
Msa0243500 MtrunA17_Chr1g0180951 41.111 90 37 1 28 101 75 164 7.45e-15 74.3
Msa0243500 MtrunA17_Chr8g0358781 39.024 123 62 3 18 128 319 440 8.34e-15 74.7
Msa0243500 MtrunA17_Chr4g0071481 40.000 120 47 3 7 103 85 202 9.92e-15 73.9
Msa0243500 MtrunA17_Chr5g0448661 45.745 94 36 1 28 106 91 184 1.01e-14 73.9
Msa0243500 MtrunA17_Chr8g0359641 45.745 94 39 2 22 103 641 734 1.12e-14 74.3
Msa0243500 MtrunA17_Chr7g0216551 42.708 96 35 1 28 103 109 204 1.13e-14 73.9
Msa0243500 MtrunA17_Chr1g0206521 41.121 107 51 2 12 106 946 1052 1.26e-14 74.3
Msa0243500 MtrunA17_Chr1g0206521 40.187 107 52 2 12 106 304 410 9.08e-14 72.0
Msa0243500 MtrunA17_Chr8g0359651 45.745 94 39 2 22 103 641 734 1.28e-14 74.3
Msa0243500 MtrunA17_Chr4g0031601 42.045 88 35 1 30 101 80 167 2.45e-14 73.2
Msa0243500 MtrunA17_Chr6g0453001 41.237 97 37 1 30 106 42 138 2.79e-14 72.8
Msa0243500 MtrunA17_Chr2g0328171 39.583 96 38 1 28 103 60 155 2.97e-14 72.8
Msa0243500 MtrunA17_Chr7g0245571 39.344 122 47 3 30 134 79 190 3.09e-14 72.8
Msa0243500 MtrunA17_Chr5g0394021 42.308 104 47 2 16 106 295 398 4.02e-14 72.8
Msa0243500 MtrunA17_Chr4g0060531 38.384 99 41 1 28 106 68 166 4.77e-14 72.0
Msa0243500 MtrunA17_Chr6g0452761 43.750 96 34 1 28 103 119 214 6.85e-14 71.6
Msa0243500 MtrunA17_Chr8g0340951 39.450 109 50 3 8 106 15 117 8.51e-14 69.3
Msa0243500 MtrunA17_Chr5g0442111 65.909 44 6 1 117 160 24 58 1.01e-13 65.9
Msa0243500 MtrunA17_Chr5g0416011 39.815 108 45 1 16 103 110 217 1.11e-13 71.2
Msa0243500 MtrunA17_Chr5g0408941 42.857 91 35 1 30 103 80 170 1.16e-13 70.9
Msa0243500 MtrunA17_Chr1g0150741 35.659 129 58 3 24 135 64 184 1.16e-13 70.9
Msa0243500 MtrunA17_Chr8g0341011 38.835 103 47 3 11 103 545 641 1.20e-13 71.2
Msa0243500 MtrunA17_Chr5g0443531 42.157 102 45 2 30 117 665 766 1.56e-13 71.2
Msa0243500 MtrunA17_Chr8g0341061 40.777 103 45 3 11 103 589 685 1.59e-13 70.9
Msa0243500 MtrunA17_Chr2g0294351 64.815 54 18 1 228 280 689 742 1.60e-13 70.9
Msa0243500 MtrunA17_Chr8g0362661 38.889 108 46 1 16 103 108 215 1.82e-13 70.5
Msa0243500 MtrunA17_Chr5g0406841 37.374 99 42 1 28 106 132 230 2.17e-13 70.1
Msa0243500 MtrunA17_Chr8g0341151 38.318 107 50 3 10 106 534 634 2.42e-13 70.5
Msa0243500 MtrunA17_Chr8g0379931 38.393 112 58 2 28 129 696 806 3.26e-13 70.1
Msa0243500 MtrunA17_Chr4g0055301 43.750 96 34 2 28 103 55 150 3.73e-13 69.3
Msa0243500 MtrunA17_Chr1g0206461 42.574 101 46 2 18 106 308 408 4.24e-13 69.7
Msa0243500 MtrunA17_Chr8g0380441 40.351 114 47 4 9 103 40 151 4.42e-13 68.9
Msa0243500 MtrunA17_Chr3g0108361 42.391 92 42 2 28 108 608 699 4.91e-13 69.7
Msa0243500 MtrunA17_Chr3g0104091 39.362 94 37 1 30 103 41 134 6.03e-13 68.9
Msa0243500 MtrunA17_Chr8g0370461 39.583 96 38 1 28 103 78 173 6.58e-13 68.6
Msa0243500 MtrunA17_Chr7g0236201 41.667 84 39 1 30 103 459 542 1.06e-12 68.6
Msa0243500 MtrunA17_Chr8g0344141 42.268 97 39 1 24 103 61 157 1.06e-12 68.2
Msa0243500 MtrunA17_Chr7g0236161 41.667 84 39 1 30 103 459 542 1.07e-12 68.6
Msa0243500 MtrunA17_Chr7g0236121 41.667 84 39 1 30 103 493 576 1.08e-12 68.6
Msa0243500 MtrunA17_Chr1g0205771 41.379 87 41 1 30 106 332 418 1.11e-12 68.2
Msa0243500 MtrunA17_Chr8g0389251 39.130 115 54 2 24 128 386 494 1.13e-12 68.2
Msa0243500 MtrunA17_Chr5g0399981 44.211 95 34 3 28 103 50 144 1.15e-12 67.8
Msa0243500 MtrunA17_Chr2g0312571 35.156 128 68 3 15 128 20 146 1.19e-12 68.2
Msa0243500 MtrunA17_Chr4g0070411 41.758 91 36 1 30 103 73 163 1.30e-12 67.8
Msa0243500 MtrunA17_Chr2g0315151 43.678 87 39 1 30 106 654 740 1.39e-12 68.2
Msa0243500 MtrunA17_Chr8g0340881 38.679 106 49 3 11 106 546 645 1.40e-12 68.2
Msa0243500 MtrunA17_Chr8g0340971 37.736 106 50 3 11 106 65 164 1.56e-12 66.6
Msa0243500 MtrunA17_Chr8g0366971 40.625 96 46 1 19 103 53 148 1.75e-12 67.4
Msa0243500 MtrunA17_Chr1g0201611 42.857 84 38 1 30 103 75 158 2.05e-12 67.0
Msa0243500 MtrunA17_Chr1g0206451 39.640 111 52 3 8 106 340 447 2.06e-12 67.4
Msa0243500 MtrunA17_Chr8g0358911 37.000 100 53 1 14 103 18 117 2.22e-12 67.0
Msa0243500 MtrunA17_Chr3g0143951 40.625 96 37 1 28 103 68 163 2.38e-12 67.0
Msa0243500 MtrunA17_Chr8g0336581 39.000 100 41 2 24 103 58 157 2.60e-12 67.0
Msa0243500 MtrunA17_Chr5g0413981 38.318 107 53 2 10 103 31 137 2.85e-12 66.6
Msa0243500 MtrunA17_Chr2g0314961 42.857 84 38 1 30 103 144 227 3.26e-12 66.6
Msa0243500 MtrunA17_Chr2g0280771 34.959 123 63 2 1 106 435 557 3.51e-12 66.6
Msa0243500 MtrunA17_Chr6g0485761 44.706 85 37 1 29 103 282 366 3.77e-12 66.6
Msa0243500 MtrunA17_Chr3g0078551 38.889 108 51 2 7 103 493 596 3.86e-12 66.6
Msa0243500 MtrunA17_Chr5g0402071 44.048 84 37 1 30 103 155 238 3.97e-12 66.6
Msa0243500 MtrunA17_Chr2g0315061 42.857 84 38 1 30 103 25 108 4.05e-12 66.2
Msa0243500 MtrunA17_Chr8g0340911 40.860 93 39 3 21 103 552 638 4.08e-12 66.6
Msa0243500 MtrunA17_Chr4g0053591 37.383 107 51 2 30 126 136 236 4.49e-12 66.2
Msa0243500 MtrunA17_Chr4g0049601 36.792 106 56 1 12 106 329 434 4.59e-12 66.6
Msa0243500 MtrunA17_Chr2g0314821 43.678 87 39 1 30 106 652 738 4.65e-12 66.6
Msa0243500 MtrunA17_Chr8g0366931 39.583 96 47 1 19 103 3 98 4.74e-12 65.9
Msa0243500 MtrunA17_Chr8g0340931 39.583 96 42 3 21 106 552 641 4.76e-12 66.6
Msa0243500 MtrunA17_Chr3g0093381 37.500 96 40 1 28 103 94 189 4.87e-12 65.9
Msa0243500 MtrunA17_Chr8g0340891 40.625 96 41 3 21 106 550 639 5.17e-12 66.2
Msa0243500 MtrunA17_Chr3g0129391 45.161 93 39 3 25 106 858 949 5.36e-12 66.6
Msa0243500 MtrunA17_Chr8g0359691 40.777 103 50 2 14 106 637 738 5.56e-12 66.2
Msa0243500 MtrunA17_Chr4g0049581 34.167 120 67 2 19 127 328 446 5.60e-12 66.2
Msa0243500 MtrunA17_Chr4g0069251 45.238 84 36 1 30 103 167 250 6.41e-12 65.9
Msa0243500 MtrunA17_Chr2g0315081 39.048 105 53 2 30 124 642 745 6.97e-12 66.2
Msa0243500 MtrunA17_Chr1g0206211 41.667 84 39 1 30 103 16 99 7.03e-12 63.5
Msa0243500 MtrunA17_Chr3g0111631 36.458 96 41 1 28 103 62 157 7.03e-12 65.5
Msa0243500 MtrunA17_Chr2g0330471 38.938 113 53 3 24 126 389 495 7.11e-12 65.9
Msa0243500 MtrunA17_Chr5g0426941 34.507 142 75 5 1 128 300 437 8.31e-12 65.9
Msa0243500 MtrunA17_Chr3g0080881 43.529 85 39 1 28 103 60 144 9.27e-12 65.1
Msa0243500 MtrunA17_Chr8g0358831 37.288 118 51 4 6 106 498 609 9.43e-12 65.5
Msa0243500 MtrunA17_Chr7g0236641 39.286 84 41 1 30 103 514 597 9.53e-12 65.5
Msa0243500 MtrunA17_Chr2g0312561 39.535 86 42 1 28 103 29 114 1.02e-11 65.1
Msa0243500 MtrunA17_Chr2g0281971 39.286 84 41 1 30 103 37 120 1.08e-11 64.7
Msa0243500 MtrunA17_Chr7g0236231 37.931 87 44 1 30 106 507 593 1.09e-11 65.5
Msa0243500 MtrunA17_Chr7g0236691 40.230 87 42 1 30 106 489 575 1.09e-11 65.5
Msa0243500 MtrunA17_Chr2g0314991 41.379 87 41 1 30 106 1165 1251 1.13e-11 65.5
Msa0243500 MtrunA17_Chr2g0314991 44.048 84 37 1 30 103 199 282 1.27e-11 65.5
Msa0243500 MtrunA17_Chr5g0428111 42.529 87 40 1 30 106 492 578 1.23e-11 65.1
Msa0243500 MtrunA17_Chr4g0031571 37.500 96 40 1 28 103 81 176 1.25e-11 64.7
Msa0243500 MtrunA17_Chr2g0280831 40.230 87 42 1 30 106 84 170 1.32e-11 64.7
Msa0243500 MtrunA17_Chr8g0373501 40.000 85 41 1 29 103 324 408 1.35e-11 65.1
Msa0243500 MtrunA17_Chr5g0403891 40.000 85 41 1 29 103 243 327 1.37e-11 65.1
Msa0243500 MtrunA17_Chr8g0366991 38.384 99 49 2 19 105 418 516 1.40e-11 65.1
Msa0243500 MtrunA17_Chr2g0280781 40.230 87 42 1 30 106 499 585 1.52e-11 65.1
Msa0243500 MtrunA17_Chr2g0314871 43.678 87 39 1 30 106 650 736 1.54e-11 65.1
Msa0243500 MtrunA17_Chr7g0219781 35.398 113 55 2 9 103 495 607 1.56e-11 65.1
Msa0243500 MtrunA17_Chr2g0314841 43.678 87 39 1 30 106 649 735 1.61e-11 65.1
Msa0243500 MtrunA17_Chr7g0247831 43.590 78 35 1 30 98 526 603 1.66e-11 65.1
Msa0243500 MtrunA17_Chr2g0314881 44.048 84 37 1 30 103 217 300 1.72e-11 64.7
Msa0243500 MtrunA17_Chr3g0080901 42.353 85 40 1 28 103 114 198 1.79e-11 64.3
Msa0243500 MtrunA17_Chr4g0034931 39.286 84 41 1 30 103 128 211 1.87e-11 64.3
Msa0243500 MtrunA17_Chr5g0432871 39.130 92 45 2 28 108 602 693 1.88e-11 64.7
Msa0243500 MtrunA17_Chr8g0341101 37.000 100 48 3 17 103 591 688 2.04e-11 64.7
Msa0243500 MtrunA17_Chr1g0183041 43.333 90 40 2 28 106 337 426 2.13e-11 64.3
Msa0243500 MtrunA17_Chr1g0203631 41.379 87 41 1 30 106 981 1067 2.25e-11 64.7
Msa0243500 MtrunA17_Chr2g0280801 39.080 87 43 1 30 106 516 602 2.27e-11 64.3
Msa0243500 MtrunA17_Chr8g0340871 40.449 89 41 2 28 106 564 650 2.32e-11 64.3
Msa0243500 MtrunA17_Chr2g0302631 44.048 84 37 1 30 103 172 255 2.32e-11 64.3
Msa0243500 MtrunA17_Chr3g0079661 42.391 92 43 1 25 106 899 990 2.34e-11 64.7
Msa0243500 MtrunA17_Chr1g0206531 43.678 87 39 1 30 106 326 412 2.36e-11 64.3
Msa0243500 MtrunA17_Chr1g0181731 36.607 112 53 3 23 124 581 684 3.03e-11 63.9
Msa0243500 MtrunA17_Chr2g0314901 42.529 87 40 1 30 106 657 743 3.13e-11 63.9
Msa0243500 MtrunA17_Chr7g0236571 41.379 87 41 1 30 106 328 414 3.22e-11 63.9
Msa0243500 MtrunA17_Chr7g0220741 37.864 103 52 3 12 103 277 378 3.25e-11 63.9
Msa0243500 MtrunA17_Chr2g0314911 41.379 87 41 1 30 106 650 736 3.39e-11 63.9
Msa0243500 MtrunA17_Chr7g0219691 37.500 104 54 2 11 103 501 604 3.43e-11 63.9
Msa0243500 MtrunA17_Chr4g0048801 35.354 99 54 1 15 103 492 590 3.47e-11 63.9
Msa0243500 MtrunA17_Chr8g0340081 42.222 90 41 2 30 108 495 584 3.72e-11 63.9
Msa0243500 MtrunA17_Chr5g0422921 38.462 104 53 2 13 106 471 573 3.74e-11 63.9
Msa0243500 MtrunA17_Chr4g0031561 37.374 99 42 1 28 106 79 177 3.93e-11 63.2
Msa0243500 MtrunA17_Chr4g0069051 57.447 47 20 0 57 103 13 59 3.97e-11 59.3
Msa0243500 MtrunA17_Chr7g0221711 42.391 92 42 2 28 108 608 699 4.05e-11 63.9
Msa0243500 MtrunA17_Chr1g0206401 38.017 121 60 3 9 115 319 438 4.11e-11 63.5
Msa0243500 MtrunA17_Chr7g0219631 38.384 99 50 2 9 97 30 127 4.46e-11 59.7
Msa0243500 MtrunA17_Chr3g0108351 40.000 90 43 2 27 105 605 694 4.53e-11 63.5
Msa0243500 MtrunA17_Chr7g0236651 40.230 87 42 1 30 106 474 560 4.66e-11 63.5
Msa0243500 MtrunA17_Chr7g0219671 41.667 84 39 1 30 103 521 604 4.68e-11 63.5
Msa0243500 MtrunA17_Chr1g0206391 37.097 124 59 4 11 115 5 128 4.96e-11 62.8
Msa0243500 MtrunA17_Chr8g0341881 41.111 90 43 1 24 103 387 476 5.11e-11 63.2
Msa0243500 MtrunA17_Chr5g0420181 38.393 112 50 3 30 129 487 591 5.19e-11 63.2
Msa0243500 MtrunA17_Chr4g0047561 39.286 84 41 1 30 103 35 118 5.27e-11 62.8
Msa0243500 MtrunA17_Chr7g0219721 37.755 98 51 1 16 103 507 604 5.36e-11 63.2
Msa0243500 MtrunA17_Chr7g0236561 39.080 87 43 1 30 106 494 580 5.49e-11 63.2
Msa0243500 MtrunA17_Chr7g0221191 45.238 84 36 1 30 103 383 466 5.53e-11 63.2
Msa0243500 MtrunA17_Chr5g0428581 43.529 85 38 1 32 106 35 119 5.90e-11 62.8
Msa0243500 MtrunA17_Chr5g0420161 38.393 112 50 3 30 129 263 367 6.00e-11 63.2
Msa0243500 MtrunA17_Chr7g0263591 29.825 171 91 5 10 159 571 733 6.28e-11 63.2
Msa0243500 MtrunA17_Chr4g0055011 38.095 84 42 1 30 103 60 143 6.41e-11 62.4
Msa0243500 MtrunA17_Chr4g0025961 35.398 113 53 2 14 106 490 602 6.72e-11 63.2
Msa0243500 MtrunA17_Chr6g0474871 37.931 87 44 1 30 106 554 640 6.74e-11 63.2
Msa0243500 MtrunA17_Chr7g0262521 42.529 87 39 2 28 103 332 418 6.81e-11 62.8
Msa0243500 MtrunA17_Chr8g0366981 38.384 99 50 1 19 106 279 377 6.85e-11 62.8
Msa0243500 MtrunA17_Chr7g0236341 39.080 87 43 1 30 106 507 593 6.92e-11 63.2
Msa0243500 MtrunA17_Chr8g0361281 41.667 84 39 1 30 103 502 585 7.16e-11 62.8
Msa0243500 MtrunA17_Chr8g0375511 42.697 89 41 1 28 106 826 914 7.52e-11 63.2
Msa0243500 MtrunA17_Chr1g0175421 36.735 98 50 2 18 103 103 200 7.72e-11 62.4
Msa0243500 MtrunA17_Chr2g0333181 33.083 133 73 3 8 128 10 138 8.27e-11 62.0
Msa0243500 MtrunA17_Chr2g0280791 39.080 87 43 1 30 106 510 596 8.70e-11 62.8
Msa0243500 MtrunA17_Chr6g0475201 36.782 87 45 1 30 106 563 649 8.84e-11 62.8
Msa0243500 MtrunA17_Chr7g0239211 36.000 100 53 1 15 103 316 415 9.13e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0243500 AT1G07870.1 71.875 96 16 1 19 103 80 175 3.75e-36 134
Msa0243500 AT1G07870.2 71.875 96 16 1 19 103 80 175 1.89e-35 134
Msa0243500 AT2G28590.2 65.049 103 25 1 12 103 68 170 1.76e-34 128
Msa0243500 AT2G28590.1 65.049 103 25 1 12 103 68 170 8.42e-34 128
Msa0243500 AT5G02800.1 59.783 92 26 1 26 106 57 148 8.20e-28 111
Msa0243500 AT5G18610.1 55.340 103 34 2 12 103 54 155 7.89e-27 110
Msa0243500 AT5G18610.2 55.340 103 34 2 12 103 54 155 7.89e-27 110
Msa0243500 AT5G18610.3 55.340 103 34 2 12 103 54 155 7.89e-27 110
Msa0243500 AT3G24790.1 50.000 106 42 1 12 106 17 122 1.81e-24 101
Msa0243500 AT3G07070.1 50.000 104 38 2 14 103 48 151 2.02e-24 102
Msa0243500 AT3G24790.2 50.000 106 42 1 12 106 35 140 2.13e-24 102
Msa0243500 AT1G20650.1 55.914 93 31 1 24 106 60 152 3.02e-24 101
Msa0243500 AT5G13160.1 57.303 89 27 1 26 103 70 158 3.35e-24 102
Msa0243500 AT3G02810.1 51.648 91 33 1 24 103 46 136 1.90e-23 100
Msa0243500 AT5G16500.1 51.724 87 31 1 28 103 60 146 6.56e-23 99.0
Msa0243500 AT1G68200.2 83.333 48 8 0 113 160 216 263 8.00e-23 96.3
Msa0243500 AT1G68200.6 83.333 48 8 0 113 160 216 263 8.00e-23 96.3
Msa0243500 AT1G68200.1 83.333 48 8 0 113 160 217 264 8.12e-23 96.3
Msa0243500 AT1G68200.5 83.333 48 8 0 113 160 217 264 8.12e-23 96.3
Msa0243500 AT1G61860.1 49.515 103 38 2 18 106 58 160 9.98e-23 97.4
Msa0243500 AT1G76370.1 49.038 104 43 1 13 106 46 149 2.33e-22 96.3
Msa0243500 AT1G66810.1 62.319 69 26 0 105 173 219 287 3.72e-22 94.7
Msa0243500 AT1G66810.3 62.319 69 26 0 105 173 219 287 3.72e-22 94.7
Msa0243500 AT4G13190.4 50.549 91 34 1 27 106 56 146 1.91e-21 92.4
Msa0243500 AT3G20530.2 52.000 100 34 2 18 103 55 154 2.23e-21 92.4
Msa0243500 AT3G20530.1 52.000 100 34 2 18 103 55 154 4.28e-21 92.8
Msa0243500 AT4G13190.1 50.549 91 34 1 27 106 56 146 7.23e-21 92.0
Msa0243500 AT3G26940.1 44.792 96 41 2 18 103 52 145 1.49e-18 85.9
Msa0243500 AT3G55450.1 44.792 96 33 1 28 103 47 142 2.29e-18 85.1
Msa0243500 AT3G55450.2 41.441 111 45 1 16 106 72 182 3.76e-18 84.7
Msa0243500 AT1G14370.1 46.875 96 31 1 28 103 72 167 5.55e-17 81.3
Msa0243500 AT2G07180.1 45.055 91 33 1 30 103 78 168 1.85e-16 79.7
Msa0243500 AT2G07180.2 45.055 91 33 1 30 103 78 168 1.85e-16 79.7
Msa0243500 AT2G28930.2 43.750 96 34 1 28 103 55 150 2.31e-16 79.3
Msa0243500 AT2G28930.3 43.750 96 34 1 28 103 58 153 2.50e-16 79.3
Msa0243500 AT2G02800.1 44.792 96 33 1 28 103 69 164 2.92e-16 79.0
Msa0243500 AT2G02800.2 44.792 96 33 1 28 103 69 164 2.92e-16 79.0
Msa0243500 AT2G28930.1 43.750 96 34 1 28 103 66 161 2.94e-16 79.0
Msa0243500 AT2G39660.1 37.931 116 48 2 28 119 53 168 4.11e-16 78.6
Msa0243500 AT5G02290.2 39.655 116 46 2 28 119 54 169 5.40e-16 78.2
Msa0243500 AT5G02290.1 39.655 116 46 2 28 119 54 169 5.40e-16 78.2
Msa0243500 AT3G01300.1 40.625 96 37 1 28 103 122 217 6.76e-15 75.1
Msa0243500 AT5G15080.1 40.625 96 37 1 28 103 128 223 8.57e-15 74.7
Msa0243500 AT5G42440.1 41.379 87 41 1 30 106 69 155 9.25e-15 74.3
Msa0243500 AT1G69790.2 38.053 113 50 1 11 103 42 154 1.06e-14 74.3
Msa0243500 AT5G35580.2 43.299 97 38 1 24 103 70 166 1.23e-14 74.3
Msa0243500 AT5G35580.1 43.299 97 38 1 24 103 58 154 1.40e-14 74.3
Msa0243500 AT1G69790.1 38.053 113 50 1 11 103 53 165 1.43e-14 73.9
Msa0243500 AT1G06840.1 46.067 89 37 2 28 105 611 699 2.36e-14 73.9
Msa0243500 AT2G28940.2 40.217 92 37 1 28 101 88 179 5.17e-14 72.4
Msa0243500 AT3G28690.1 38.235 102 43 1 22 103 6 107 7.29e-14 71.6
Msa0243500 AT5G01020.1 35.862 145 69 3 9 129 29 173 8.90e-14 71.6
Msa0243500 AT3G28690.3 38.235 102 43 1 22 103 55 156 1.10e-13 71.2
Msa0243500 AT3G28690.2 38.235 102 43 1 22 103 106 207 1.14e-13 71.6
Msa0243500 AT2G17220.2 41.489 94 37 1 28 103 72 165 1.14e-13 71.2
Msa0243500 AT1G07570.3 37.069 116 49 2 28 119 65 180 1.15e-13 71.2
Msa0243500 AT1G07570.1 37.069 116 49 2 28 119 54 169 1.19e-13 71.2
Msa0243500 AT1G07570.5 37.069 116 49 2 28 119 54 169 1.19e-13 71.2
Msa0243500 AT1G07570.2 37.069 116 49 2 28 119 54 169 1.19e-13 71.2
Msa0243500 AT2G17220.1 41.489 94 37 1 28 103 73 166 1.21e-13 71.2
Msa0243500 AT4G13190.5 60.377 53 21 0 54 106 5 57 1.51e-13 70.1
Msa0243500 AT2G05940.1 33.577 137 66 3 24 143 69 197 1.54e-13 71.2
Msa0243500 AT1G07650.4 44.318 88 39 1 29 106 452 539 1.62e-13 71.2
Msa0243500 AT1G74490.1 40.594 101 46 1 17 103 66 166 1.65e-13 70.9
Msa0243500 AT1G29750.3 40.594 101 50 1 16 106 655 755 1.80e-13 71.2
Msa0243500 AT1G07650.3 44.318 88 39 1 29 106 639 726 1.96e-13 71.2
Msa0243500 AT1G07650.1 44.318 88 39 1 29 106 665 752 2.03e-13 71.2
Msa0243500 AT1G07650.2 44.318 88 39 1 29 106 671 758 2.07e-13 71.2
Msa0243500 AT1G29750.2 40.594 101 50 1 16 106 655 755 2.35e-13 70.9
Msa0243500 AT1G53430.2 39.669 121 60 3 14 122 598 717 2.59e-13 70.9
Msa0243500 AT1G29750.1 40.594 101 50 1 16 106 640 740 2.59e-13 70.9
Msa0243500 AT1G53440.1 39.669 121 60 3 14 122 637 756 2.61e-13 70.9
Msa0243500 AT1G26970.1 41.237 97 36 2 28 103 69 165 2.63e-13 70.1
Msa0243500 AT3G09830.2 41.111 90 37 1 28 101 70 159 2.85e-13 70.1
Msa0243500 AT3G09830.3 41.111 90 37 1 28 101 70 159 2.85e-13 70.1
Msa0243500 AT3G09830.1 41.111 90 37 1 28 101 70 159 2.85e-13 70.1
Msa0243500 AT1G53430.1 39.669 121 60 3 14 122 639 758 2.95e-13 70.9
Msa0243500 AT1G52290.2 39.167 120 54 4 4 106 100 217 6.91e-13 68.9
Msa0243500 AT1G56145.3 43.182 88 40 1 29 106 571 658 7.00e-13 69.3
Msa0243500 AT1G56145.2 43.182 88 40 1 29 106 674 761 7.79e-13 69.3
Msa0243500 AT1G56145.1 43.182 88 40 1 29 106 674 761 7.81e-13 69.3
Msa0243500 AT1G52290.1 39.316 117 52 4 4 103 100 214 8.22e-13 68.9
Msa0243500 AT5G03320.2 43.182 88 34 1 30 101 69 156 8.31e-13 68.9
Msa0243500 AT5G03320.1 43.182 88 34 1 30 101 69 156 8.31e-13 68.9
Msa0243500 AT1G76360.1 40.625 96 37 1 28 103 149 244 8.47e-13 68.9
Msa0243500 AT3G14840.2 41.573 89 42 1 28 106 658 746 8.90e-13 69.3
Msa0243500 AT1G61590.1 41.758 91 36 1 30 103 87 177 9.55e-13 68.6
Msa0243500 AT1G55610.1 39.316 117 57 2 25 127 842 958 9.60e-13 69.3
Msa0243500 AT1G55610.2 39.316 117 57 2 25 127 842 958 9.60e-13 69.3
Msa0243500 AT4G29050.1 37.255 102 49 3 30 116 332 433 9.71e-13 68.9
Msa0243500 AT4G29050.2 37.255 102 49 3 30 116 346 447 9.97e-13 68.9
Msa0243500 AT1G56140.1 44.318 88 39 1 29 106 680 767 1.48e-12 68.6
Msa0243500 AT1G26150.1 40.000 90 44 1 24 103 412 501 1.78e-12 68.2
Msa0243500 AT3G13380.1 39.316 117 55 2 25 131 841 951 1.91e-12 68.2
Msa0243500 AT5G01950.7 37.719 114 54 3 30 130 614 723 2.31e-12 67.8
Msa0243500 AT1G26150.2 40.000 90 44 1 24 103 412 501 2.37e-12 67.8
Msa0243500 AT1G29720.1 38.318 107 52 2 30 122 661 767 2.53e-12 67.8
Msa0243500 AT1G56120.1 45.455 88 38 1 29 106 697 784 2.54e-12 67.8
Msa0243500 AT3G24540.1 41.071 112 47 2 14 106 146 257 2.65e-12 67.4
Msa0243500 AT2G26290.1 34.483 145 70 3 8 127 46 190 2.71e-12 67.4
Msa0243500 AT1G53420.1 42.353 85 39 1 29 103 611 695 2.77e-12 67.8
Msa0243500 AT1G56120.3 45.455 88 38 1 29 106 531 618 2.82e-12 67.8
Msa0243500 AT5G56460.1 38.793 116 47 4 9 103 45 157 2.88e-12 67.0
Msa0243500 AT1G70130.1 35.577 104 52 3 28 116 320 423 2.92e-12 67.4
Msa0243500 AT1G56120.2 45.455 88 38 1 29 106 679 766 3.01e-12 67.8
Msa0243500 AT1G24030.5 37.143 105 53 3 12 103 32 136 3.75e-12 65.5
Msa0243500 AT5G56790.1 41.304 92 44 1 22 103 370 461 3.87e-12 67.0
Msa0243500 AT2G23950.2 37.383 107 56 2 8 103 265 371 4.61e-12 66.6
Msa0243500 AT4G32710.1 38.235 102 50 2 15 103 359 460 4.73e-12 67.0
Msa0243500 AT1G72540.1 34.959 123 55 3 30 135 72 186 4.95e-12 66.6
Msa0243500 AT1G68690.1 42.222 90 42 1 24 103 359 448 4.98e-12 66.6
Msa0243500 AT1G68690.3 42.222 90 42 1 24 103 359 448 4.98e-12 66.6
Msa0243500 AT1G68690.2 42.222 90 42 1 24 103 359 448 4.98e-12 66.6
Msa0243500 AT3G45410.1 40.230 87 42 1 30 106 330 416 4.99e-12 66.6
Msa0243500 AT1G24030.4 37.143 105 53 3 12 103 32 136 5.10e-12 65.5
Msa0243500 AT1G68690.4 42.222 90 42 1 24 103 359 448 6.27e-12 66.6
Msa0243500 AT4G11470.1 37.500 104 54 2 13 106 311 413 6.46e-12 66.6
Msa0243500 AT2G23950.1 37.383 107 56 2 8 103 265 371 6.62e-12 66.2
Msa0243500 AT4G11470.2 37.500 104 54 2 13 106 316 418 6.78e-12 66.2
Msa0243500 AT4G34440.2 42.222 90 42 1 24 103 294 383 6.84e-12 66.2
Msa0243500 AT4G34440.1 42.222 90 42 1 24 103 294 383 6.84e-12 66.2
Msa0243500 AT1G16670.1 32.824 131 68 3 16 131 10 135 7.03e-12 65.9
Msa0243500 AT5G10530.1 40.000 100 49 1 18 106 311 410 7.47e-12 66.2
Msa0243500 AT3G45430.2 37.000 100 50 3 20 108 324 421 7.51e-12 66.2
Msa0243500 AT3G45430.3 37.000 100 50 3 20 108 324 421 7.51e-12 66.2
Msa0243500 AT3G45430.1 37.000 100 50 3 20 108 324 421 7.51e-12 66.2
Msa0243500 AT1G24030.2 37.143 105 53 3 12 103 32 136 7.53e-12 65.5
Msa0243500 AT1G24030.1 37.143 105 53 3 12 103 46 150 9.02e-12 65.5
Msa0243500 AT3G13690.2 38.462 117 56 3 24 130 393 503 9.83e-12 65.9
Msa0243500 AT3G13690.1 38.462 117 56 3 24 130 393 503 9.83e-12 65.9
Msa0243500 AT3G13690.3 38.462 117 56 3 24 130 393 503 9.83e-12 65.9
Msa0243500 AT4G35600.1 38.542 96 39 1 28 103 72 167 1.05e-11 65.5
Msa0243500 AT4G35600.2 38.542 96 39 1 28 103 73 168 1.05e-11 65.5
Msa0243500 AT4G11480.4 38.462 104 53 2 13 106 293 395 1.14e-11 65.9
Msa0243500 AT4G11480.1 38.462 104 53 2 13 106 293 395 1.16e-11 65.5
Msa0243500 AT4G39400.1 44.086 93 40 3 25 106 866 957 1.46e-11 65.5
Msa0243500 AT5G35370.1 35.833 120 53 4 26 129 501 612 1.58e-11 65.5
Msa0243500 AT1G56130.3 42.529 87 40 1 30 106 483 569 1.99e-11 65.1
Msa0243500 AT1G56130.1 42.529 87 40 1 30 106 534 620 2.03e-11 65.1
Msa0243500 AT1G56130.2 42.529 87 40 1 30 106 682 768 2.07e-11 65.1
Msa0243500 AT4G17660.1 35.789 95 42 1 28 103 77 171 2.12e-11 64.3
Msa0243500 AT4G23220.1 43.023 86 40 1 30 106 325 410 2.72e-11 64.7
Msa0243500 AT4G30520.1 37.864 103 53 2 12 103 273 375 2.94e-11 64.3
Msa0243500 AT5G56890.1 43.333 90 41 1 27 106 708 797 2.95e-11 64.7
Msa0243500 AT3G09010.2 35.185 108 60 1 9 106 13 120 2.97e-11 63.5
Msa0243500 AT3G24550.1 43.023 86 39 1 28 103 266 351 3.37e-11 64.3
Msa0243500 AT4G21410.1 38.614 101 51 2 32 122 222 321 3.43e-11 64.3
Msa0243500 AT5G60310.1 36.782 87 45 1 27 103 328 414 3.45e-11 64.3
Msa0243500 AT4G21410.3 38.614 101 51 2 32 122 347 446 3.79e-11 63.9
Msa0243500 AT4G21410.2 38.614 101 51 2 32 122 347 446 4.14e-11 63.9
Msa0243500 AT5G01560.1 33.898 118 55 3 30 133 351 459 4.79e-11 63.9
Msa0243500 AT1G49270.1 42.529 87 39 2 28 103 322 408 4.86e-11 63.9
Msa0243500 AT5G60300.3 35.556 90 48 1 27 106 329 418 5.54e-11 63.5
Msa0243500 AT5G60300.1 35.556 90 48 1 27 106 329 418 5.57e-11 63.5
Msa0243500 AT5G60300.2 35.556 90 48 1 27 106 329 418 5.57e-11 63.5
Msa0243500 AT2G20300.1 44.186 86 38 1 28 103 335 420 6.07e-11 63.5
Msa0243500 AT3G09010.1 35.238 105 58 1 9 103 13 117 6.35e-11 63.2
Msa0243500 AT4G11530.1 39.080 87 43 1 30 106 340 426 6.72e-11 63.5
Msa0243500 AT1G11303.1 41.379 87 41 1 30 106 497 583 6.79e-11 63.5
Msa0243500 AT1G30570.1 38.462 91 46 1 26 106 504 594 6.80e-11 63.5
Msa0243500 AT1G55200.3 42.222 90 42 1 24 103 361 450 8.06e-11 63.2
Msa0243500 AT1G55200.4 42.222 90 42 1 24 103 361 450 8.06e-11 63.2
Msa0243500 AT1G55200.1 42.222 90 42 1 24 103 361 450 8.06e-11 63.2
Msa0243500 AT1G55200.2 42.222 90 42 1 24 103 361 450 8.06e-11 63.2
Msa0243500 AT4G39110.1 35.135 111 56 2 26 126 510 614 8.15e-11 63.2
Msa0243500 AT5G01950.2 35.965 114 51 3 30 130 529 633 9.57e-11 63.2

Find 76 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATCTTGTCAAGTTATT+AGG 0.087093 2_2:-20670942 Msa0243500:CDS
CCTAATAACTTGACAAGATT+TGG 0.180045 2_2:+20670942 None:intergenic
TGAGTGAGTTGAAAGATAAA+AGG 0.245671 2_2:-20671374 Msa0243500:CDS
CAAATCTTGTCAAGTTATTA+GGG 0.286689 2_2:-20670941 Msa0243500:CDS
TAAAGCAACTTCATCCTAAT+GGG 0.317866 2_2:-20671022 Msa0243500:CDS
CTGATTCCTTGAACCCCATT+AGG 0.319278 2_2:+20671008 None:intergenic
ATAAAGCAACTTCATCCTAA+TGG 0.334586 2_2:-20671023 Msa0243500:CDS
CTCGCGGCGGCTGATGTATA+AGG 0.338415 2_2:-20666653 Msa0243500:exon
ACTGTTAAGTTTAAGATCTA+TGG 0.344060 2_2:+20666512 None:intergenic
CTTAACCTCTATCATATTGC+AGG 0.347153 2_2:-20667464 Msa0243500:intron
CTAATGGGGTTCAAGGAATC+AGG 0.353345 2_2:-20671007 Msa0243500:CDS
GTCAATTCGGTCACGACATT+GGG 0.357280 2_2:-20668934 Msa0243500:CDS
ACAAAATAACTACAATAGTT+TGG 0.364744 2_2:+20666539 None:intergenic
TTTAGGGCAGATTGCTTTGT+TGG 0.364749 2_2:-20671222 Msa0243500:CDS
ACCAACATTCCAGGAACTTC+TGG 0.366306 2_2:-20666798 Msa0243500:CDS
GAAAGTGGCACATGCCCTTA+TGG 0.379603 2_2:-20668965 Msa0243500:CDS
CTAATAACTTGACAAGATTT+GGG 0.380368 2_2:+20670943 None:intergenic
TAAGCCTTTCCAGAAGTTCC+TGG 0.388590 2_2:+20666789 None:intergenic
GGCTCTCCGACCAACATTCC+AGG 0.393259 2_2:-20666807 Msa0243500:CDS
CCTGCTGTTCTTACACTGCT+TGG 0.397273 2_2:-20667143 Msa0243500:CDS
GAGTGAGTTGAAAGATAAAA+GGG 0.398846 2_2:-20671373 Msa0243500:CDS
CTTCATCCTAATGGGGTTCA+AGG 0.402547 2_2:-20671014 Msa0243500:CDS
TTCTGTTAACTTTCTCAACT+TGG 0.414492 2_2:-20667503 Msa0243500:CDS
TTTGTTGGTGAAGGAGGGTT+TGG 0.423987 2_2:-20671207 Msa0243500:CDS
CTCTATCCCACCAGCAGACC+TGG 0.432081 2_2:+20666727 None:intergenic
CACCAGCAGACCTGGTTGCT+TGG 0.433030 2_2:+20666735 None:intergenic
GTTGCAGAATGGAGAATTTG+AGG 0.433347 2_2:-20667360 Msa0243500:intron
TATGGAGACCACTGTCAATT+CGG 0.443498 2_2:-20668947 Msa0243500:CDS
ACTGTAGGGATATTCTATTA+TGG 0.447068 2_2:-20667548 Msa0243500:intron
GATTGCTTTGTTGGTGAAGG+AGG 0.448209 2_2:-20671213 Msa0243500:CDS
GTCTATTACTATCAGTGGTC+CGG 0.449072 2_2:-20666828 Msa0243500:intron
TAACAGTGCTGCTCTTTGCT+TGG 0.450191 2_2:-20666496 Msa0243500:three_prime_UTR
AATTGACAGTGGTCTCCATA+AGG 0.458812 2_2:+20668950 None:intergenic
TTCCAAGCAACCAGGTCTGC+TGG 0.459522 2_2:-20666737 Msa0243500:CDS
AGAATTTGAGGATTGGAACA+TGG 0.469884 2_2:-20667348 Msa0243500:CDS
CACAAAACTCACATGCTTCG+TGG 0.476243 2_2:-20667186 Msa0243500:CDS
TAGCGTGTGTGGCGGATCAC+TGG 0.477964 2_2:+20668902 None:intergenic
GAATTTGAGGATTGGAACAT+GGG 0.478874 2_2:-20667347 Msa0243500:CDS
TGTCAATTCGGTCACGACAT+TGG 0.489982 2_2:-20668935 Msa0243500:CDS
TCCAGAAGTTCCTGGAATGT+TGG 0.492115 2_2:+20666797 None:intergenic
TGGAATGTTGGTCGGAGAGC+CGG 0.496889 2_2:+20666809 None:intergenic
GGAAGGCGAGCAAAGACTAT+TGG 0.499029 2_2:-20670910 Msa0243500:intron
GTTTGGCAAGATTAATGTTG+TGG 0.504658 2_2:+20666556 None:intergenic
CCAAGCAGTGTAAGAACAGC+AGG 0.509079 2_2:+20667143 None:intergenic
GCAGATTGCTTTGTTGGTGA+AGG 0.509126 2_2:-20671216 Msa0243500:CDS
AGACTGAGCTCTATAACAAA+TGG 0.516543 2_2:-20668991 Msa0243500:CDS
ATTGACAGTGGTCTCCATAA+GGG 0.520085 2_2:+20668951 None:intergenic
ATTGCTTTGTTGGTGAAGGA+GGG 0.528066 2_2:-20671212 Msa0243500:CDS
AGAATGGAGAATTTGAGGAT+TGG 0.534210 2_2:-20667355 Msa0243500:CDS
AGATACCTGCAATATGATAG+AGG 0.540772 2_2:+20667459 None:intergenic
GAGGTTAAGAATGACAATAC+AGG 0.546520 2_2:+20667478 None:intergenic
TGGTGAAGGAGGGTTTGGCA+AGG 0.547119 2_2:-20671202 Msa0243500:intron
GCTCAGTCTTGAACATCCCC+TGG 0.557484 2_2:+20669005 None:intergenic
CATTCCAGGAACTTCTGGAA+AGG 0.573284 2_2:-20666793 Msa0243500:CDS
TATAACAAATGGCAGGAAAG+TGG 0.573891 2_2:-20668980 Msa0243500:CDS
TGAGCTCTATAACAAATGGC+AGG 0.577438 2_2:-20668987 Msa0243500:CDS
TTCCTCATGAGAAGTTGAGT+TGG 0.586922 2_2:-20666602 Msa0243500:three_prime_UTR
CTATTCAGTTCCAAGCAACC+AGG 0.596008 2_2:-20666745 Msa0243500:CDS
AATTCTCAAATGGATCAGCT+AGG 0.599653 2_2:+20666690 None:intergenic
CAAGCAACCAGGTCTGCTGG+TGG 0.600800 2_2:-20666734 Msa0243500:CDS
TACCAACTCAACTTCTCATG+AGG 0.603512 2_2:+20666600 None:intergenic
TGAGATGATTGTGTACAACC+AGG 0.606228 2_2:-20669023 Msa0243500:CDS
GAAGTTCCTGGAATGTTGGT+CGG 0.609876 2_2:+20666801 None:intergenic
TAATGGGGTTCAAGGAATCA+GGG 0.617819 2_2:-20671006 Msa0243500:CDS
GGCTTAAAGAACTTCAGAGA+CGG 0.623151 2_2:-20666772 Msa0243500:CDS
GAGATGATTGTGTACAACCA+GGG 0.627071 2_2:-20669022 Msa0243500:CDS
AAGCAACCAGGTCTGCTGGT+GGG 0.640383 2_2:-20666733 Msa0243500:CDS
ATAACTTGACAAGATTTGGG+TGG 0.642471 2_2:+20670946 None:intergenic
TTGTACACAATCATCTCAAG+AGG 0.648853 2_2:+20669028 None:intergenic
AATTTGAGGATTGGAACATG+GGG 0.653289 2_2:-20667346 Msa0243500:CDS
TCAATTCGGTCACGACATTG+GGG 0.661919 2_2:-20668933 Msa0243500:CDS
AAAGCAACTTCATCCTAATG+GGG 0.664735 2_2:-20671021 Msa0243500:CDS
ATTTGAGGATTGGAACATGG+GGG 0.692276 2_2:-20667345 Msa0243500:CDS
TGTCGTGACCGAATTGACAG+TGG 0.697203 2_2:+20668939 None:intergenic
CCACACACGCTACAAAACTG+AGG 0.721664 2_2:-20668891 Msa0243500:intron
AGATGATTGTGTACAACCAG+GGG 0.741581 2_2:-20669021 Msa0243500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTACAATTATTTATTTTA+TGG + chr2_2:20667547-20667566 None:intergenic 10.0%
!! TTTAGATTAGATTATAATTA+AGG - chr2_2:20667729-20667748 Msa0243500:intron 10.0%
!! ATTTATTTATGTTGAAAATA+AGG - chr2_2:20668273-20668292 Msa0243500:intron 10.0%
!!! CAATTAATTGAATATATTTT+GGG - chr2_2:20668378-20668397 Msa0243500:intron 10.0%
!! AAAGCATATATTAATAATAG+AGG + chr2_2:20668252-20668271 None:intergenic 15.0%
!!! GCAATTAATTGAATATATTT+TGG - chr2_2:20668377-20668396 Msa0243500:intron 15.0%
!! TTTATGTTATGATATGTAAT+TGG - chr2_2:20669015-20669034 Msa0243500:CDS 15.0%
!!! TTGAACTTTCATATATTTTT+AGG - chr2_2:20669051-20669070 Msa0243500:intron 15.0%
!!! TTGAACTTTCATATATTTTT+AGG - chr2_2:20669051-20669070 Msa0243500:intron 15.0%
!! AATTTATGAAGTTAACTTTA+TGG + chr2_2:20669446-20669465 None:intergenic 15.0%
!!! TACTATCTATAAATACTTTT+TGG - chr2_2:20669487-20669506 Msa0243500:intron 15.0%
!!! TTTTTGGTTTATAATATTCA+CGG - chr2_2:20669503-20669522 Msa0243500:intron 15.0%
!!! CTTCCATATATATAAATTTT+TGG - chr2_2:20670354-20670373 Msa0243500:intron 15.0%
!! CATCCAAAAATTTATATATA+TGG + chr2_2:20670360-20670379 None:intergenic 15.0%
!! AAAAAGAAAAATACTTAACA+TGG - chr2_2:20670785-20670804 Msa0243500:intron 15.0%
!!! CTTTTCATATTAAACATTAT+TGG - chr2_2:20670862-20670881 Msa0243500:intron 15.0%
!! AAAAAGAAAAAATTCTCAAA+TGG + chr2_2:20671064-20671083 None:intergenic 15.0%
!!! CATTGTAATGTAATTTTATA+CGG - chr2_2:20671297-20671316 Msa0243500:intron 15.0%
!! AAGAATTTGAATTAAAACGA+CGG - chr2_2:20666429-20666448 Msa0243500:three_prime_UTR 20.0%
!!! ATGTTAATTTGCTCATTTTA+AGG - chr2_2:20666652-20666671 Msa0243500:exon 20.0%
!!! AGATTGAGTATTTTTATTGT+TGG - chr2_2:20666681-20666700 Msa0243500:CDS 20.0%
!!! TGATATTTTAAACTGATAGA+TGG - chr2_2:20667475-20667494 Msa0243500:CDS 20.0%
!!! GCATCAAAATTTAACTTAAT+TGG + chr2_2:20667697-20667716 None:intergenic 20.0%
!! AATCTAATCTAAAAACTGTA+TGG + chr2_2:20667722-20667741 None:intergenic 20.0%
!! AGATTAGATTATAATTAAGG+TGG - chr2_2:20667732-20667751 Msa0243500:intron 20.0%
!!! TTTAAAACTTAGTAAAACCA+AGG + chr2_2:20667991-20668010 None:intergenic 20.0%
!!! TTGGTTTTACTAAGTTTTAA+AGG - chr2_2:20667990-20668009 Msa0243500:intron 20.0%
!!! TGGTTTTACTAAGTTTTAAA+GGG - chr2_2:20667991-20668010 Msa0243500:intron 20.0%
!! AACAAAATCAAACAACTAAA+TGG + chr2_2:20668156-20668175 None:intergenic 20.0%
!! ATTTAGAAATGGTAATTTCT+TGG - chr2_2:20668342-20668361 Msa0243500:intron 20.0%
!! TAGATTTGATTGTTGATATT+CGG - chr2_2:20668609-20668628 Msa0243500:intron 20.0%
!! GTAGTGTTATCAAATATAAT+TGG - chr2_2:20669073-20669092 Msa0243500:intron 20.0%
!! TGTTATCAAATATAATTGGA+AGG - chr2_2:20669077-20669096 Msa0243500:intron 20.0%
!! GTTATCAAATATAATTGGAA+GGG - chr2_2:20669078-20669097 Msa0243500:intron 20.0%
!!! AACACTATTTTTAGGTTAAA+AGG - chr2_2:20669303-20669322 Msa0243500:intron 20.0%
!!! ACACTATTTTTAGGTTAAAA+GGG - chr2_2:20669304-20669323 Msa0243500:intron 20.0%
!! TTGGAATAAATTTAGTTACA+GGG + chr2_2:20669375-20669394 None:intergenic 20.0%
!! ATTGGAATAAATTTAGTTAC+AGG + chr2_2:20669376-20669395 None:intergenic 20.0%
!! TTAACTTCATAAATTGTTTG+TGG - chr2_2:20669451-20669470 Msa0243500:intron 20.0%
!!! ACACCATTTTATTAAAAAGA+GGG - chr2_2:20669701-20669720 Msa0243500:intron 20.0%
!!! AAATTCTTAACCTTAACTTT+TGG - chr2_2:20669883-20669902 Msa0243500:intron 20.0%
!! CTTAAATGTATGATTAACTT+AGG + chr2_2:20669978-20669997 None:intergenic 20.0%
!! ACTGTTTAATATTCCAAATT+TGG - chr2_2:20670006-20670025 Msa0243500:intron 20.0%
!! ATATTCAGAAATTAGTATGT+AGG - chr2_2:20670060-20670079 Msa0243500:intron 20.0%
!! ATCACATCAAGTTTATAATA+AGG + chr2_2:20670086-20670105 None:intergenic 20.0%
!!! AAAAATTTATGTTGACTGTA+GGG - chr2_2:20670179-20670198 Msa0243500:intron 20.0%
!!! ATTTTTCTTTTTTTCTCCAA+AGG + chr2_2:20670777-20670796 None:intergenic 20.0%
!!! GATTTTCATATTTCTTTCAA+TGG - chr2_2:20670807-20670826 Msa0243500:intron 20.0%
!! ACAAAATAACTACAATAGTT+TGG + chr2_2:20671205-20671224 None:intergenic 20.0%
! AGAATTTGAATTAAAACGAC+GGG - chr2_2:20666430-20666449 Msa0243500:three_prime_UTR 25.0%
!! AGTTGCAATAGAGAATTTTA+GGG - chr2_2:20666503-20666522 Msa0243500:three_prime_UTR 25.0%
! ACATTCATGTTCTTTGTAAT+TGG - chr2_2:20666625-20666644 Msa0243500:three_prime_UTR 25.0%
!!! AGTATTTTTATTGTTGGTGT+AGG - chr2_2:20666687-20666706 Msa0243500:CDS 25.0%
! CTAATAACTTGACAAGATTT+GGG + chr2_2:20666801-20666820 None:intergenic 25.0%
! CAAATCTTGTCAAGTTATTA+GGG - chr2_2:20666800-20666819 Msa0243500:CDS 25.0%
!! TTTTAGCAAAAGCTACATTT+TGG + chr2_2:20666992-20667011 None:intergenic 25.0%
! CCTATAATGTAGACATTATA+TGG + chr2_2:20667836-20667855 None:intergenic 25.0%
! CCATATAATGTCTACATTAT+AGG - chr2_2:20667833-20667852 Msa0243500:intron 25.0%
!!! ACATTATAGGAGTATTTAAG+AGG - chr2_2:20667846-20667865 Msa0243500:intron 25.0%
! ATATTTATGATAGCCATGTA+TGG - chr2_2:20667905-20667924 Msa0243500:intron 25.0%
!!! TAAAACCAAGGTATTGATTT+TGG + chr2_2:20667979-20667998 None:intergenic 25.0%
!!! GGTTTTACTAAGTTTTAAAG+GGG - chr2_2:20667992-20668011 Msa0243500:intron 25.0%
! TACTTAGAGATAAAGATGAA+TGG - chr2_2:20668300-20668319 Msa0243500:intron 25.0%
! TACCATTTCTAAATTGAACA+CGG + chr2_2:20668336-20668355 None:intergenic 25.0%
! TTACATTAATATGAGTGTCA+AGG + chr2_2:20668539-20668558 None:intergenic 25.0%
! TGTTATGATATGTAATTGGA+AGG - chr2_2:20669019-20669038 Msa0243500:CDS 25.0%
! GTTATGATATGTAATTGGAA+GGG - chr2_2:20669020-20669039 Msa0243500:CDS 25.0%
! GTTATCAAATAAAGTGTATG+TGG - chr2_2:20669136-20669155 Msa0243500:intron 25.0%
! TATCAAAGATGATTCTCTTA+TGG - chr2_2:20669347-20669366 Msa0243500:intron 25.0%
! TGGAATAAATTTAGTTACAG+GGG + chr2_2:20669374-20669393 None:intergenic 25.0%
! TTATAATATTCACGGAAGAT+TGG - chr2_2:20669511-20669530 Msa0243500:intron 25.0%
! TATAATATTCACGGAAGATT+GGG - chr2_2:20669512-20669531 Msa0243500:intron 25.0%
!! CACACCATTTTATTAAAAAG+AGG - chr2_2:20669700-20669719 Msa0243500:intron 25.0%
!! CACCATTTTATTAAAAAGAG+GGG - chr2_2:20669702-20669721 Msa0243500:intron 25.0%
!! GTTAGTAGTGATTTAAAGTT+TGG - chr2_2:20669738-20669757 Msa0243500:intron 25.0%
! TACTCTTCTCTTATCATTTA+AGG + chr2_2:20669864-20669883 None:intergenic 25.0%
! GTATGATTAACTTAGGTTAT+AGG + chr2_2:20669971-20669990 None:intergenic 25.0%
! TTACTATGTATGACCAAATT+TGG + chr2_2:20670022-20670041 None:intergenic 25.0%
!!! GATTGAGTTTTTTAGAAACT+TGG - chr2_2:20670103-20670122 Msa0243500:intron 25.0%
!! GAAAAATTTATGTTGACTGT+AGG - chr2_2:20670178-20670197 Msa0243500:intron 25.0%
! ACAATATCACATATGAAAAG+GGG + chr2_2:20670648-20670667 None:intergenic 25.0%
! GACAATATCACATATGAAAA+GGG + chr2_2:20670649-20670668 None:intergenic 25.0%
! AGACAATATCACATATGAAA+AGG + chr2_2:20670650-20670669 None:intergenic 25.0%
!! ATTGTCTCTCTTAATTTTGT+TGG - chr2_2:20670663-20670682 Msa0243500:intron 25.0%
!!! AGGTTGATAAGATTTATGTT+AGG + chr2_2:20670757-20670776 None:intergenic 25.0%
! ACATAAATCTTATCAACCTT+TGG - chr2_2:20670758-20670777 Msa0243500:intron 25.0%
!! ACTGTTAAGTTTAAGATCTA+TGG + chr2_2:20671232-20671251 None:intergenic 25.0%
!!! ACCACTTTTAATTGTACAAA+AGG - chr2_2:20671331-20671350 Msa0243500:intron 25.0%
!! ACCTTTTGTACAATTAAAAG+TGG + chr2_2:20671335-20671354 None:intergenic 25.0%
! GTACAAAAGGTAGAAAAAAA+AGG - chr2_2:20671344-20671363 Msa0243500:intron 25.0%
! TGAGTGAGTTGAAAGATAAA+AGG - chr2_2:20666367-20666386 Msa0243500:three_prime_UTR 30.0%
! GAGTGAGTTGAAAGATAAAA+GGG - chr2_2:20666368-20666387 Msa0243500:three_prime_UTR 30.0%
GAATTTGAATTAAAACGACG+GGG - chr2_2:20666431-20666450 Msa0243500:three_prime_UTR 30.0%
! CAGTTGCAATAGAGAATTTT+AGG - chr2_2:20666502-20666521 Msa0243500:three_prime_UTR 30.0%
TTACCTCGAGAAAATTAATC+AGG - chr2_2:20666573-20666592 Msa0243500:three_prime_UTR 30.0%
TTACAAAGAACATGAATGTG+TGG + chr2_2:20666624-20666643 None:intergenic 30.0%
ATAAAGCAACTTCATCCTAA+TGG - chr2_2:20666718-20666737 Msa0243500:CDS 30.0%
TAAAGCAACTTCATCCTAAT+GGG - chr2_2:20666719-20666738 Msa0243500:CDS 30.0%
CCTAATAACTTGACAAGATT+TGG + chr2_2:20666802-20666821 None:intergenic 30.0%
CCAAATCTTGTCAAGTTATT+AGG - chr2_2:20666799-20666818 Msa0243500:CDS 30.0%
AATATAGCATACCATGCAAA+TGG + chr2_2:20666891-20666910 None:intergenic 30.0%
AAACATGCACTTAGGAATTT+AGG + chr2_2:20666923-20666942 None:intergenic 30.0%
CATCTGAAAAAATGATGTAG+AGG + chr2_2:20667115-20667134 None:intergenic 30.0%
CAGGTTAAAATGTCACAAAA+AGG + chr2_2:20667219-20667238 None:intergenic 30.0%
AAACCATATACAGATCACAT+TGG + chr2_2:20667253-20667272 None:intergenic 30.0%
!! AAAGATTTTAGAGACGAAAC+AGG - chr2_2:20667510-20667529 Msa0243500:CDS 30.0%
TTAATTGGAATATGACACCA+TGG + chr2_2:20667682-20667701 None:intergenic 30.0%
TATATAGAACTAGCAAGACT+AGG - chr2_2:20667798-20667817 Msa0243500:intron 30.0%
GTAATGTCTTGAATCTTCAT+TGG - chr2_2:20668193-20668212 Msa0243500:intron 30.0%
AACCGTGTTCAATTTAGAAA+TGG - chr2_2:20668331-20668350 Msa0243500:intron 30.0%
TTGAACCATATGTTACCTAT+GGG - chr2_2:20668929-20668948 Msa0243500:CDS 30.0%
TTCATATTCCTTTACGCTAT+CGG + chr2_2:20669181-20669200 None:intergenic 30.0%
ACACTATTTAGTACAGATAG+AGG - chr2_2:20669223-20669242 Msa0243500:intron 30.0%
!! GATCGACAAACACTATTTTT+AGG - chr2_2:20669295-20669314 Msa0243500:intron 30.0%
AAGTTTCAGTTCAAACTCTA+AGG + chr2_2:20669419-20669438 None:intergenic 30.0%
CTCTACTATTAGTACACATA+AGG + chr2_2:20669616-20669635 None:intergenic 30.0%
TATGTAAAGTAGTGCACATA+TGG - chr2_2:20669672-20669691 Msa0243500:intron 30.0%
CACTACTAACAATACAATTG+AGG + chr2_2:20669728-20669747 None:intergenic 30.0%
!!! TAAAGTTTGGTTTTTGCGAT+TGG - chr2_2:20669751-20669770 Msa0243500:intron 30.0%
CCATACATAAGTAGTATTTC+TGG + chr2_2:20669804-20669823 None:intergenic 30.0%
CCAGAAATACTACTTATGTA+TGG - chr2_2:20669801-20669820 Msa0243500:intron 30.0%
ACTGTAGGGATATTCTATTA+TGG - chr2_2:20670193-20670212 Msa0243500:intron 30.0%
TTCTGTTAACTTTCTCAACT+TGG - chr2_2:20670238-20670257 Msa0243500:intron 30.0%
! AAGGGGAAGGAATTTTATAT+TGG - chr2_2:20670483-20670502 Msa0243500:intron 30.0%
CAATATCACATATGAAAAGG+GGG + chr2_2:20670647-20670666 None:intergenic 30.0%
!!! TTTTTTCTTTTTGTCACTCG+CGG - chr2_2:20671072-20671091 Msa0243500:intron 30.0%
TAAACGTGATCAACTTTCCT+TGG - chr2_2:20666401-20666420 Msa0243500:three_prime_UTR 35.0%
ATTCAAATTCTTCACGTCCA+AGG + chr2_2:20666421-20666440 None:intergenic 35.0%
! GAACCTGATTAATTTTCTCG+AGG + chr2_2:20666579-20666598 None:intergenic 35.0%
AAAGCAACTTCATCCTAATG+GGG - chr2_2:20666720-20666739 Msa0243500:CDS 35.0%
ATAACTTGACAAGATTTGGG+TGG + chr2_2:20666798-20666817 None:intergenic 35.0%
!! CAAGTTATTAGGGTTTTGTG+CGG - chr2_2:20666810-20666829 Msa0243500:CDS 35.0%
GTTTATGAGTACATGCCATT+GGG - chr2_2:20666853-20666872 Msa0243500:intron 35.0%
!!! TCCTAAGTGCATGTTTTGAT+TGG - chr2_2:20666927-20666946 Msa0243500:intron 35.0%
ACCAATCAAAACATGCACTT+AGG + chr2_2:20666931-20666950 None:intergenic 35.0%
!! ATTGGTAGCGAATTTAGTTG+TGG - chr2_2:20666945-20666964 Msa0243500:intron 35.0%
CAATTCATTCTCTGCATGTT+CGG + chr2_2:20667056-20667075 None:intergenic 35.0%
! CAATCCAGTGGTTTTTGTAA+AGG + chr2_2:20667143-20667162 None:intergenic 35.0%
CTTTACAAAAACCACTGGAT+TGG - chr2_2:20667141-20667160 Msa0243500:CDS 35.0%
ACAAGATGAATGCTTGTATG+AGG - chr2_2:20667167-20667186 Msa0243500:CDS 35.0%
CTGTATATGGTTTCCAATTG+CGG - chr2_2:20667260-20667279 Msa0243500:intron 35.0%
ACACTGCAAATTTCCATACA+TGG + chr2_2:20667921-20667940 None:intergenic 35.0%
ATGGAAATTTGCAGTGTTGT+TGG - chr2_2:20667924-20667943 Msa0243500:intron 35.0%
AGTAGCCAAAATCAATACCT+TGG - chr2_2:20667971-20667990 Msa0243500:intron 35.0%
!!! TAAGTTTTAAAGGGGCCAAA+TGG - chr2_2:20668000-20668019 Msa0243500:intron 35.0%
TTACAAGTAACAAGTGATGC+AGG - chr2_2:20668034-20668053 Msa0243500:intron 35.0%
TACAAGTAACAAGTGATGCA+GGG - chr2_2:20668035-20668054 Msa0243500:intron 35.0%
! TCTCACTCAATCTGTTTTCA+TGG - chr2_2:20668069-20668088 Msa0243500:intron 35.0%
! TTTGTTACTCATTGCTGACT+AGG - chr2_2:20668170-20668189 Msa0243500:intron 35.0%
! TTGTTACTCATTGCTGACTA+GGG - chr2_2:20668171-20668190 Msa0243500:intron 35.0%
AAACATTAGTATGACTGCCA+AGG + chr2_2:20668442-20668461 None:intergenic 35.0%
TTAATATGAGTGTCAAGGCA+TGG + chr2_2:20668534-20668553 None:intergenic 35.0%
!! AAAAGGTATTTGTGTGAGGA+GGG - chr2_2:20668675-20668694 Msa0243500:intron 35.0%
TTGTACACAATCATCTCAAG+AGG + chr2_2:20668716-20668735 None:intergenic 35.0%
AGACTGAGCTCTATAACAAA+TGG - chr2_2:20668750-20668769 Msa0243500:intron 35.0%
TATAACAAATGGCAGGAAAG+TGG - chr2_2:20668761-20668780 Msa0243500:intron 35.0%
GTTGAACCATATGTTACCTA+TGG - chr2_2:20668928-20668947 Msa0243500:CDS 35.0%
AAAATAGTGTTTGTCGATCG+AGG + chr2_2:20669294-20669313 None:intergenic 35.0%
! TCAAACTCTAAGGATATGAG+AGG + chr2_2:20669409-20669428 None:intergenic 35.0%
ATTGGGTTATTTGGAGATCA+AGG - chr2_2:20669529-20669548 Msa0243500:intron 35.0%
TTGCAAGTTGCAACTATGTT+AGG - chr2_2:20669574-20669593 Msa0243500:intron 35.0%
AGTTGCAACTATGTTAGGAA+AGG - chr2_2:20669579-20669598 Msa0243500:intron 35.0%
! GGCCCCTCTTTTTAATAAAA+TGG + chr2_2:20669707-20669726 None:intergenic 35.0%
ACTTGAGAAGCCAAAAGTTA+AGG + chr2_2:20669896-20669915 None:intergenic 35.0%
CTGAATATTAGTCAGATCTC+AGG + chr2_2:20670048-20670067 None:intergenic 35.0%
! CTTGGTGTATCTGCATAATA+TGG - chr2_2:20670121-20670140 Msa0243500:intron 35.0%
GTGTATCTGCATAATATGGA+AGG - chr2_2:20670125-20670144 Msa0243500:intron 35.0%
GAGGTTAAGAATGACAATAC+AGG + chr2_2:20670266-20670285 None:intergenic 35.0%
CTTAACCTCTATCATATTGC+AGG - chr2_2:20670277-20670296 Msa0243500:intron 35.0%
AGATACCTGCAATATGATAG+AGG + chr2_2:20670285-20670304 None:intergenic 35.0%
! TTTTTGGATGAGTTGCAGAA+TGG - chr2_2:20670370-20670389 Msa0243500:intron 35.0%
AGAATGGAGAATTTGAGGAT+TGG - chr2_2:20670386-20670405 Msa0243500:intron 35.0%
AGAATTTGAGGATTGGAACA+TGG - chr2_2:20670393-20670412 Msa0243500:intron 35.0%
GAATTTGAGGATTGGAACAT+GGG - chr2_2:20670394-20670413 Msa0243500:intron 35.0%
AATTTGAGGATTGGAACATG+GGG - chr2_2:20670395-20670414 Msa0243500:intron 35.0%
ATTAGCAACGAGACTTTACA+AGG - chr2_2:20670464-20670483 Msa0243500:intron 35.0%
TTAGCAACGAGACTTTACAA+GGG - chr2_2:20670465-20670484 Msa0243500:intron 35.0%
TAGCACTAATCTCTGCAAAA+TGG + chr2_2:20670527-20670546 None:intergenic 35.0%
ACTCTGTCTATTACTATCAG+TGG - chr2_2:20670908-20670927 Msa0243500:intron 35.0%
AATTCTCAAATGGATCAGCT+AGG + chr2_2:20671054-20671073 None:intergenic 35.0%
GTTTGGCAAGATTAATGTTG+TGG + chr2_2:20671188-20671207 None:intergenic 35.0%
! GTTTGTGCAACTTTTCCATC+TGG + chr2_2:20666462-20666481 None:intergenic 40.0%
! TTTAGGGCAGATTGCTTTGT+TGG - chr2_2:20666519-20666538 Msa0243500:three_prime_UTR 40.0%
! ATTGCTTTGTTGGTGAAGGA+GGG - chr2_2:20666529-20666548 Msa0243500:three_prime_UTR 40.0%
AGGGTTTGGCAAGGTTTATA+AGG - chr2_2:20666548-20666567 Msa0243500:three_prime_UTR 40.0%
GGGTTTGGCAAGGTTTATAA+GGG - chr2_2:20666549-20666568 Msa0243500:three_prime_UTR 40.0%
TAATGGGGTTCAAGGAATCA+GGG - chr2_2:20666735-20666754 Msa0243500:CDS 40.0%
!! TTATTAGGGTTTTGTGCGGA+AGG - chr2_2:20666814-20666833 Msa0243500:CDS 40.0%
GGTTTATGAGTACATGCCAT+TGG - chr2_2:20666852-20666871 Msa0243500:intron 40.0%
TCATTGGAGAACCATTTGCA+TGG - chr2_2:20666877-20666896 Msa0243500:intron 40.0%
GTTCGGATTCACAATGACTT+TGG + chr2_2:20667039-20667058 None:intergenic 40.0%
CGAACATGCAGAGAATGAAT+TGG - chr2_2:20667054-20667073 Msa0243500:intron 40.0%
TTCGCCTTTACAAAAACCAC+TGG - chr2_2:20667136-20667155 Msa0243500:CDS 40.0%
GTGCCAATGTGATCTGTATA+TGG - chr2_2:20667247-20667266 Msa0243500:intron 40.0%
CGTGATTACAGATAATGCTG+TGG + chr2_2:20667292-20667311 None:intergenic 40.0%
TTGCGATATTGCAGCTATTG+CGG + chr2_2:20667625-20667644 None:intergenic 40.0%
CAATAGCTGCAATATCGCAA+AGG - chr2_2:20667625-20667644 Msa0243500:intron 40.0%
!!! ATGGTTTTAAAATGCAGCCG+CGG + chr2_2:20667663-20667682 None:intergenic 40.0%
! ATTTGCAGTGTTGTTGGTAG+TGG - chr2_2:20667930-20667949 Msa0243500:intron 40.0%
!! TTTTAAAGGGGCCAAATGGT+TGG - chr2_2:20668004-20668023 Msa0243500:intron 40.0%
GTAAAACCAGTCCAACCATT+TGG + chr2_2:20668018-20668037 None:intergenic 40.0%
ACAAGTAACAAGTGATGCAG+GGG - chr2_2:20668036-20668055 Msa0243500:intron 40.0%
!!! ATGGTTTTATCCACTGCTGT+TGG - chr2_2:20668088-20668107 Msa0243500:intron 40.0%
!! GAATCTTCATTGGTTAGCCT+TGG - chr2_2:20668203-20668222 Msa0243500:intron 40.0%
CTTGGATACATCTTGTGCTT+GGG - chr2_2:20668221-20668240 Msa0243500:intron 40.0%
TATATGCAGAGCTCTTGACA+CGG + chr2_2:20668409-20668428 None:intergenic 40.0%
! GCATATATTTTGCCATGCCT+TGG - chr2_2:20668422-20668441 Msa0243500:intron 40.0%
!! CAAAAGGTATTTGTGTGAGG+AGG - chr2_2:20668674-20668693 Msa0243500:intron 40.0%
TGAGATGATTGTGTACAACC+AGG - chr2_2:20668718-20668737 Msa0243500:intron 40.0%
GAGATGATTGTGTACAACCA+GGG - chr2_2:20668719-20668738 Msa0243500:intron 40.0%
AGATGATTGTGTACAACCAG+GGG - chr2_2:20668720-20668739 Msa0243500:intron 40.0%
TGAGCTCTATAACAAATGGC+AGG - chr2_2:20668754-20668773 Msa0243500:intron 40.0%
ATTGACAGTGGTCTCCATAA+GGG + chr2_2:20668793-20668812 None:intergenic 40.0%
AATTGACAGTGGTCTCCATA+AGG + chr2_2:20668794-20668813 None:intergenic 40.0%
TATGGAGACCACTGTCAATT+CGG - chr2_2:20668794-20668813 Msa0243500:intron 40.0%
GCTTACCCATAGGTAACATA+TGG + chr2_2:20668937-20668956 None:intergenic 40.0%
TCAATCAATCGCTTACCCAT+AGG + chr2_2:20668947-20668966 None:intergenic 40.0%
ATAGAGGAACTATAGCCATG+TGG - chr2_2:20669239-20669258 Msa0243500:intron 40.0%
TAGAGGAACTATAGCCATGT+GGG - chr2_2:20669240-20669259 Msa0243500:intron 40.0%
TTGTCGATCGAGGAATCTAT+CGG + chr2_2:20669284-20669303 None:intergenic 40.0%
ATGAGAGGCAACTATGCTAT+TGG + chr2_2:20669394-20669413 None:intergenic 40.0%
TCACGGAAGATTGGGTTATT+TGG - chr2_2:20669520-20669539 Msa0243500:intron 40.0%
!! ATGGAAGGTACGTAGCATTT+TGG - chr2_2:20670140-20670159 Msa0243500:intron 40.0%
GTTGCAGAATGGAGAATTTG+AGG - chr2_2:20670381-20670400 Msa0243500:intron 40.0%
ATTTGAGGATTGGAACATGG+GGG - chr2_2:20670396-20670415 Msa0243500:intron 40.0%
ATAGGAGCAACTATGTGTGT+TGG - chr2_2:20670435-20670454 Msa0243500:intron 40.0%
TAGCAACGAGACTTTACAAG+GGG - chr2_2:20670466-20670485 Msa0243500:intron 40.0%
!! ACGAAGCATGTGAGTTTTGT+GGG + chr2_2:20670556-20670575 None:intergenic 40.0%
TATCACATATGAAAAGGGGG+AGG + chr2_2:20670644-20670663 None:intergenic 40.0%
GTCTATTACTATCAGTGGTC+CGG - chr2_2:20670913-20670932 Msa0243500:CDS 40.0%
GGCTTAAAGAACTTCAGAGA+CGG - chr2_2:20670969-20670988 Msa0243500:CDS 40.0%
TTCCTCATGAGAAGTTGAGT+TGG - chr2_2:20671139-20671158 Msa0243500:intron 40.0%
TACCAACTCAACTTCTCATG+AGG + chr2_2:20671144-20671163 None:intergenic 40.0%
! GCAGATTGCTTTGTTGGTGA+AGG - chr2_2:20666525-20666544 Msa0243500:three_prime_UTR 45.0%
! GATTGCTTTGTTGGTGAAGG+AGG - chr2_2:20666528-20666547 Msa0243500:three_prime_UTR 45.0%
! TTTGTTGGTGAAGGAGGGTT+TGG - chr2_2:20666534-20666553 Msa0243500:three_prime_UTR 45.0%
CTTCATCCTAATGGGGTTCA+AGG - chr2_2:20666727-20666746 Msa0243500:CDS 45.0%
CTGATTCCTTGAACCCCATT+AGG + chr2_2:20666736-20666755 None:intergenic 45.0%
CTAATGGGGTTCAAGGAATC+AGG - chr2_2:20666734-20666753 Msa0243500:CDS 45.0%
GTACATGCCATTGGGATCAT+TGG - chr2_2:20666861-20666880 Msa0243500:intron 45.0%
TGGTTCTCCAATGATCCCAA+TGG + chr2_2:20666871-20666890 None:intergenic 45.0%
CATCTTGTGTTCCAATCCAG+TGG + chr2_2:20667155-20667174 None:intergenic 45.0%
TTGGGTGCAGAAAACTACAG+TGG - chr2_2:20667382-20667401 Msa0243500:intron 45.0%
GGTGTGTATTGTCGTCATTG+CGG + chr2_2:20667604-20667623 None:intergenic 45.0%
!!! GCGGCTGCATTTTAAAACCA+TGG - chr2_2:20667662-20667681 Msa0243500:intron 45.0%
AAAAGCTACACCAACAGCAG+TGG + chr2_2:20668101-20668120 None:intergenic 45.0%
CCAAGCACAAGATGTATCCA+AGG + chr2_2:20668223-20668242 None:intergenic 45.0%
CCTTGGATACATCTTGTGCT+TGG - chr2_2:20668220-20668239 Msa0243500:intron 45.0%
TTAGTATGACTGCCAAGGCA+TGG + chr2_2:20668437-20668456 None:intergenic 45.0%
! TGTGTGTTGCTATGCGCAAA+AGG - chr2_2:20668658-20668677 Msa0243500:intron 45.0%
!! GCGCAAAAGGTATTTGTGTG+AGG - chr2_2:20668671-20668690 Msa0243500:intron 45.0%
TGTCAATTCGGTCACGACAT+TGG - chr2_2:20668806-20668825 Msa0243500:intron 45.0%
GTCAATTCGGTCACGACATT+GGG - chr2_2:20668807-20668826 Msa0243500:intron 45.0%
TCAATTCGGTCACGACATTG+GGG - chr2_2:20668808-20668827 Msa0243500:intron 45.0%
ACTCCATCACAACACAAGCA+AGG + chr2_2:20668889-20668908 None:intergenic 45.0%
! CTTGTGTTGTGATGGAGTGA+TGG - chr2_2:20668891-20668910 Msa0243500:intron 45.0%
TGCTATAGCCGATAGCGTAA+AGG - chr2_2:20669170-20669189 Msa0243500:intron 45.0%
! AACTATAGCCATGTGGGTTG+CGG - chr2_2:20669246-20669265 Msa0243500:intron 45.0%
GCATCTTGTGTGACATGCAT+AGG + chr2_2:20669643-20669662 None:intergenic 45.0%
GGTGGTAGAGCTAAGTGTAT+AGG - chr2_2:20670417-20670436 Msa0243500:intron 45.0%
AACGAGACTTTACAAGGGGA+AGG - chr2_2:20670470-20670489 Msa0243500:intron 45.0%
! CACGAAGCATGTGAGTTTTG+TGG + chr2_2:20670557-20670576 None:intergenic 45.0%
CACAAAACTCACATGCTTCG+TGG - chr2_2:20670555-20670574 Msa0243500:intron 45.0%
! GCTTCGTGGCACTTTCTTTT+TGG - chr2_2:20670569-20670588 Msa0243500:intron 45.0%
!! CGTGGCACTTTCTTTTTGGT+TGG - chr2_2:20670573-20670592 Msa0243500:intron 45.0%
GAAGTTCCTGGAATGTTGGT+CGG + chr2_2:20670943-20670962 None:intergenic 45.0%
ACCAACATTCCAGGAACTTC+TGG - chr2_2:20670943-20670962 Msa0243500:CDS 45.0%
TCCAGAAGTTCCTGGAATGT+TGG + chr2_2:20670947-20670966 None:intergenic 45.0%
! CATTCCAGGAACTTCTGGAA+AGG - chr2_2:20670948-20670967 Msa0243500:CDS 45.0%
TAAGCCTTTCCAGAAGTTCC+TGG + chr2_2:20670955-20670974 None:intergenic 45.0%
CTATTCAGTTCCAAGCAACC+AGG - chr2_2:20670996-20671015 Msa0243500:CDS 45.0%
! TTTCTTTTTGTCACTCGCGG+CGG - chr2_2:20671075-20671094 Msa0243500:intron 45.0%
! TAACAGTGCTGCTCTTTGCT+TGG - chr2_2:20671245-20671264 Msa0243500:CDS 45.0%
GGAAGGCGAGCAAAGACTAT+TGG - chr2_2:20666831-20666850 Msa0243500:intron 50.0%
CACATTGGCACAGAACACAC+AGG + chr2_2:20667238-20667257 None:intergenic 50.0%
TGTGTGAGGAGGGTAGAAAG+AGG - chr2_2:20668685-20668704 Msa0243500:intron 50.0%
GAAAGTGGCACATGCCCTTA+TGG - chr2_2:20668776-20668795 Msa0243500:intron 50.0%
TGTCGTGACCGAATTGACAG+TGG + chr2_2:20668805-20668824 None:intergenic 50.0%
!! CAGTTTTGTAGCGTGTGTGG+CGG + chr2_2:20668850-20668869 None:intergenic 50.0%
!! CCTCAGTTTTGTAGCGTGTG+TGG + chr2_2:20668853-20668872 None:intergenic 50.0%
CCACACACGCTACAAAACTG+AGG - chr2_2:20668850-20668869 Msa0243500:intron 50.0%
CAAAACTGAGGTCTGCGAGA+TGG - chr2_2:20668862-20668881 Msa0243500:intron 50.0%
GGTCCTTGCTTGTGTTGTGA+TGG - chr2_2:20668883-20668902 Msa0243500:intron 50.0%
TGGTTCAACTCTCACCAGCT+TGG + chr2_2:20668917-20668936 None:intergenic 50.0%
! ACTATAGCCATGTGGGTTGC+GGG - chr2_2:20669247-20669266 Msa0243500:intron 50.0%
GGAGCAACTATGTGTGTTGG+TGG - chr2_2:20670438-20670457 Msa0243500:intron 50.0%
CCAAGCAGTGTAAGAACAGC+AGG + chr2_2:20670601-20670620 None:intergenic 50.0%
CCTGCTGTTCTTACACTGCT+TGG - chr2_2:20670598-20670617 Msa0243500:intron 50.0%
AACGACGGGGTTTCACCAGA+TGG - chr2_2:20666444-20666463 Msa0243500:three_prime_UTR 55.0%
TGGTGAAGGAGGGTTTGGCA+AGG - chr2_2:20666539-20666558 Msa0243500:three_prime_UTR 55.0%
TTAAAATGCAGCCGCGGCTG+CGG + chr2_2:20667657-20667676 None:intergenic 55.0%
AAGGGGCCAAATGGTTGGAC+TGG - chr2_2:20668009-20668028 Msa0243500:intron 55.0%
GCTCAGTCTTGAACATCCCC+TGG + chr2_2:20668739-20668758 None:intergenic 55.0%
TGATGGAGTGATGGCCAAGC+TGG - chr2_2:20668900-20668919 Msa0243500:CDS 55.0%
TCCAAATCCCGCAACCCACA+TGG + chr2_2:20669257-20669276 None:intergenic 55.0%
TGAGGATTGGAACATGGGGG+TGG - chr2_2:20670399-20670418 Msa0243500:intron 55.0%
TGGAATGTTGGTCGGAGAGC+CGG + chr2_2:20670935-20670954 None:intergenic 55.0%
TTCCAAGCAACCAGGTCTGC+TGG - chr2_2:20671004-20671023 Msa0243500:CDS 55.0%
AAGCAACCAGGTCTGCTGGT+GGG - chr2_2:20671008-20671027 Msa0243500:CDS 55.0%
GCTGTGGCAGCATCCGCAAT+TGG + chr2_2:20667276-20667295 None:intergenic 60.0%
!! AAAGGCATCAACCGCAGCCG+CGG - chr2_2:20667643-20667662 Msa0243500:intron 60.0%
!! TAGCGTGTGTGGCGGATCAC+TGG + chr2_2:20668842-20668861 None:intergenic 60.0%
! GCCATGTGGGTTGCGGGATT+TGG - chr2_2:20669253-20669272 Msa0243500:intron 60.0%
GGCTCTCCGACCAACATTCC+AGG - chr2_2:20670934-20670953 Msa0243500:CDS 60.0%
CACCAGCAGACCTGGTTGCT+TGG + chr2_2:20671009-20671028 None:intergenic 60.0%
CAAGCAACCAGGTCTGCTGG+TGG - chr2_2:20671007-20671026 Msa0243500:CDS 60.0%
CTCTATCCCACCAGCAGACC+TGG + chr2_2:20671017-20671036 None:intergenic 60.0%
CTCGCGGCGGCTGATGTATA+AGG - chr2_2:20671088-20671107 Msa0243500:intron 60.0%
TGCACCCAATGCCCTCGCTG+CGG + chr2_2:20667371-20667390 None:intergenic 65.0%
ATGTCGCAGCGCCGCAGCGA+GGG - chr2_2:20667357-20667376 Msa0243500:intron 70.0%
!! AGCGCCGCAGCGAGGGCATT+GGG - chr2_2:20667364-20667383 Msa0243500:intron 70.0%
CTCGCTGCGGCGCTGCGACA+TGG + chr2_2:20667358-20667377 None:intergenic 75.0%
CATGTCGCAGCGCCGCAGCG+AGG - chr2_2:20667356-20667375 Msa0243500:CDS 75.0%
! CAGCGCCGCAGCGAGGGCAT+TGG - chr2_2:20667363-20667382 Msa0243500:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 20666339 20671424 20666339 ID=Msa0243500;Name=Msa0243500
chr2_2 mRNA 20666339 20671424 20666339 ID=Msa0243500-mRNA-1;Parent=Msa0243500;Name=Msa0243500-mRNA-1;_AED=0.37;_eAED=0.46;_QI=0|0.28|0.25|1|0.57|0.5|8|316|300
chr2_2 exon 20666339 20666835 20666339 ID=Msa0243500-mRNA-1:exon:8276;Parent=Msa0243500-mRNA-1
chr2_2 exon 20667131 20667228 20667131 ID=Msa0243500-mRNA-1:exon:8275;Parent=Msa0243500-mRNA-1
chr2_2 exon 20667331 20667375 20667331 ID=Msa0243500-mRNA-1:exon:8274;Parent=Msa0243500-mRNA-1
chr2_2 exon 20667465 20667563 20667465 ID=Msa0243500-mRNA-1:exon:8273;Parent=Msa0243500-mRNA-1
chr2_2 exon 20668892 20669062 20668892 ID=Msa0243500-mRNA-1:exon:8272;Parent=Msa0243500-mRNA-1
chr2_2 exon 20670911 20671054 20670911 ID=Msa0243500-mRNA-1:exon:8271;Parent=Msa0243500-mRNA-1
chr2_2 exon 20671203 20671300 20671203 ID=Msa0243500-mRNA-1:exon:8270;Parent=Msa0243500-mRNA-1
chr2_2 exon 20671358 20671424 20671358 ID=Msa0243500-mRNA-1:exon:8269;Parent=Msa0243500-mRNA-1
chr2_2 CDS 20671358 20671424 20671358 ID=Msa0243500-mRNA-1:cds;Parent=Msa0243500-mRNA-1
chr2_2 CDS 20671203 20671300 20671203 ID=Msa0243500-mRNA-1:cds;Parent=Msa0243500-mRNA-1
chr2_2 CDS 20670911 20671054 20670911 ID=Msa0243500-mRNA-1:cds;Parent=Msa0243500-mRNA-1
chr2_2 CDS 20668892 20669062 20668892 ID=Msa0243500-mRNA-1:cds;Parent=Msa0243500-mRNA-1
chr2_2 CDS 20667465 20667563 20667465 ID=Msa0243500-mRNA-1:cds;Parent=Msa0243500-mRNA-1
chr2_2 CDS 20667331 20667375 20667331 ID=Msa0243500-mRNA-1:cds;Parent=Msa0243500-mRNA-1
chr2_2 CDS 20667131 20667228 20667131 ID=Msa0243500-mRNA-1:cds;Parent=Msa0243500-mRNA-1
chr2_2 CDS 20666655 20666835 20666655 ID=Msa0243500-mRNA-1:cds;Parent=Msa0243500-mRNA-1
chr2_2 three_prime_UTR 20666339 20666654 20666339 ID=Msa0243500-mRNA-1:three_prime_utr;Parent=Msa0243500-mRNA-1
Gene Sequence

>Msa0243500

AAGGTCAAAATTGATTTGAATTTGAATTTGAGTGAGTTGAAAGATAAAAGGGAAGATGATTCTAAACATGGAAAAGTTGCACAAACATTTACTTTTGCTGAGCTTGCAGTTGCAATAGAGAATTTTAGGGCAGATTGCTTTGTTGGTGAAGGAGGGTTTGGCAAGGTTGTTGCAATAAAGCAACTTCATCCTAATGGGGTTCAAGGAATCAGGGAATTTGTTGTTGAAGTGATAACACTAAGTTTAGCAGACCACCCAAATCTTGTCAAGTTATTAGGGTTTTGTGCGGAAGGCGAGCAAAGACTATTGAAAGAGGAAGAGCCTCTTGAGATGATTGTGTACAACCAGGGGATGTTCAAGACTGAGCTCTATAACAAATGGCAGGAAAGTGGCACATGCCCTTATGGAGACCACTGTCAATTCGGTCACGACATTGGGGAGCTTCAACCAGTGATCCGCCACACACGCTACAAAACTGAGGGATATTCTATTATGGTCTTCGAGACAACTGCTACTTATTCTGTTAACTTTCTCAACTTGGTTCCTGTATTGTCATTCTTAACCTCTATCATATTGCAGAATGGAGAATTTGAGGATTGGAACATGGGGGTGGTAGAGCTAAGTAGATTAGTGCTATTGCAGCCCACAAAACTCACATGCTTCGTGGCACTTTCTTTTTGGTTGGAGCCTGCTGTTCTTACACTGCTTGGTTTATTCTTCAATGGTCCGGCTCTCCGACCAACATTCCAGGAACTTCTGGAAAGGCTTAAAGAACTTCAGAGACGGTGTGCTATTCAGTTCCAAGCAACCAGGTCTGCTGGTGGGATAGAGACTCAGAAAAGAGTCCTAGCTGATCCATTTGAGAATTTTTTCTTTTTGTCACTCGCGGCGGCTGATGTATAA
Protein sequence

>Msa0243500

KVKIDLNLNLSELKDKREDDSKHGKVAQTFTFAELAVAIENFRADCFVGEGGFGKVVAIKQLHPNGVQGIREFVVEVITLSLADHPNLVKLLGFCAEGEQRLLKEEEPLEMIVYNQGMFKTELYNKWQESGTCPYGDHCQFGHDIGELQPVIRHTRYKTEGYSIMVFETTATYSVNFLNLVPVLSFLTSIILQNGEFEDWNMGVVELSRLVLLQPTKLTCFVALSFWLEPAVLTLLGLFFNGPALRPTFQELLERLKELQRRCAIQFQATRSAGGIETQKRVLADPFENFFFLSLAAADV*