AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0247410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0247410 MtrunA17_Chr2g0302431 72.824 471 40 5 1 389 1 465 0.0 630
Msa0247410 MtrunA17_Chr4g0069301 75.281 267 61 2 110 375 179 441 1.07e-143 415
Msa0247410 MtrunA17_Chr4g0069301 68.966 116 30 1 1 110 1 116 3.72e-36 137
Msa0247410 MtrunA17_Chr5g0428031 38.118 425 189 6 16 373 5 422 1.85e-101 308
Msa0247410 MtrunA17_Chr5g0432471 35.845 438 189 8 15 365 7 439 2.20e-86 270
Msa0247410 MtrunA17_Chr3g0107011 36.754 419 196 6 15 367 9 424 1.78e-85 267
Msa0247410 MtrunA17_Chr5g0441011 48.120 266 127 4 111 373 167 424 5.35e-80 252
Msa0247410 MtrunA17_Chr5g0441011 57.547 106 42 1 16 121 9 111 1.88e-33 129
Msa0247410 MtrunA17_Chr2g0304111 45.956 272 129 5 111 373 177 439 6.30e-77 245
Msa0247410 MtrunA17_Chr2g0304111 58.586 99 41 0 12 110 15 113 3.01e-32 126
Msa0247410 MtrunA17_Chr3g0114511 35.322 419 192 8 11 367 24 425 4.55e-75 239
Msa0247410 MtrunA17_Chr8g0346081 45.620 274 140 5 102 373 160 426 6.38e-75 239
Msa0247410 MtrunA17_Chr8g0346081 61.458 96 37 0 15 110 12 107 4.95e-35 134
Msa0247410 MtrunA17_Chr4g0063881 33.095 420 217 6 16 373 7 424 5.36e-74 237
Msa0247410 MtrunA17_Chr8g0346071 44.526 274 142 5 102 373 160 425 1.19e-73 236
Msa0247410 MtrunA17_Chr8g0346071 57.944 107 40 1 4 110 6 107 1.98e-34 132
Msa0247410 MtrunA17_Chr4g0013131 44.656 262 138 4 108 367 162 418 4.03e-67 219
Msa0247410 MtrunA17_Chr4g0013131 53.000 100 47 0 15 114 7 106 3.75e-27 112
Msa0247410 MtrunA17_Chr7g0244521 42.593 270 139 6 108 368 162 424 2.51e-66 217
Msa0247410 MtrunA17_Chr7g0244521 53.922 102 47 0 15 116 7 108 1.59e-28 116
Msa0247410 MtrunA17_Chr2g0284011 40.684 263 149 4 108 365 162 422 1.26e-63 210
Msa0247410 MtrunA17_Chr2g0284011 48.515 101 52 0 14 114 6 106 2.12e-25 107
Msa0247410 MtrunA17_Chr3g0107051 39.147 258 133 7 110 365 173 408 1.53e-57 194
Msa0247410 MtrunA17_Chr2g0284031 36.594 276 150 5 111 366 184 454 7.35e-57 194
Msa0247410 MtrunA17_Chr2g0284031 49.038 104 53 0 11 114 22 125 1.43e-25 108
Msa0247410 MtrunA17_Chr8g0379091 35.484 310 163 5 111 388 179 483 1.01e-55 191
Msa0247410 MtrunA17_Chr8g0379091 55.102 98 44 0 17 114 23 120 2.45e-28 116
Msa0247410 MtrunA17_Chr5g0432491 32.771 415 193 9 17 367 20 412 5.49e-54 184
Msa0247410 MtrunA17_Chr6g0468751 37.500 256 100 3 17 212 16 271 3.77e-50 176
Msa0247410 MtrunA17_Chr6g0453681 36.576 257 103 2 17 213 16 272 3.90e-50 176
Msa0247410 MtrunA17_Chr7g0244561 37.705 244 127 4 111 354 171 389 6.25e-50 173
Msa0247410 MtrunA17_Chr7g0244561 48.000 100 47 2 14 110 10 107 5.98e-20 90.9
Msa0247410 MtrunA17_Chr2g0333821 37.594 266 154 7 110 367 166 427 1.08e-49 173
Msa0247410 MtrunA17_Chr1g0188031 37.500 256 124 6 105 350 169 398 5.88e-49 171
Msa0247410 MtrunA17_Chr1g0188031 43.750 96 52 2 17 110 17 112 2.88e-17 83.2
Msa0247410 MtrunA17_Chr1g0150321 38.610 259 135 5 111 365 166 404 1.16e-48 170
Msa0247410 MtrunA17_Chr1g0150321 51.042 96 47 0 17 112 10 105 3.25e-22 97.4
Msa0247410 MtrunA17_Chr1g0166101 41.667 216 107 4 105 319 172 369 1.19e-48 170
Msa0247410 MtrunA17_Chr1g0166101 41.221 131 66 2 15 144 19 139 4.28e-21 94.4
Msa0247410 MtrunA17_Chr4g0001331 28.774 424 223 11 15 366 15 431 7.39e-46 163
Msa0247410 MtrunA17_Chr4g0072831 28.861 395 152 9 17 369 7 314 1.91e-44 156
Msa0247410 MtrunA17_Chr6g0453671 32.819 259 114 2 15 213 14 272 8.24e-44 156
Msa0247410 MtrunA17_Chr1g0205421 34.231 260 160 4 113 365 167 422 4.09e-43 156
Msa0247410 MtrunA17_Chr1g0205421 57.143 98 41 1 12 109 5 101 1.01e-26 110
Msa0247410 MtrunA17_Chr3g0132671 31.142 289 109 3 17 215 16 304 4.76e-41 151
Msa0247410 MtrunA17_Chr3g0091281 38.235 238 81 5 11 187 4 236 1.62e-40 143
Msa0247410 MtrunA17_Chr8g0380661 30.769 286 124 6 17 237 1 277 3.40e-37 137
Msa0247410 MtrunA17_Chr8g0385281 30.201 298 129 8 17 244 2 290 8.97e-36 134
Msa0247410 MtrunA17_Chr3g0131061 30.272 294 128 7 17 242 1 285 1.27e-35 134
Msa0247410 MtrunA17_Chr4g0074111 32.824 262 112 6 111 368 171 372 1.49e-34 131
Msa0247410 MtrunA17_Chr4g0074111 52.577 97 46 0 18 114 16 112 2.66e-27 111
Msa0247410 MtrunA17_Chr5g0399911 27.778 324 142 9 19 265 5 313 7.83e-34 129
Msa0247410 MtrunA17_Chr1g0162301 28.620 297 133 9 19 241 23 314 1.78e-33 128
Msa0247410 MtrunA17_Chr2g0277501 29.412 289 127 7 17 237 1 280 3.52e-33 127
Msa0247410 MtrunA17_Chr8g0381821 29.893 281 125 8 19 231 3 279 1.27e-31 122
Msa0247410 MtrunA17_Chr3g0123791 29.771 262 112 8 19 212 4 261 4.49e-31 121
Msa0247410 MtrunA17_Chr4g0055451 30.534 262 110 8 19 212 4 261 7.61e-31 120
Msa0247410 MtrunA17_Chr8g0374571 28.283 297 134 9 19 241 22 313 3.83e-30 119
Msa0247410 MtrunA17_Chr5g0426521 29.924 264 113 9 17 212 1 260 5.08e-29 115
Msa0247410 MtrunA17_Chr7g0245031 26.531 294 146 5 10 238 138 426 4.86e-27 112
Msa0247410 MtrunA17_Chr1g0173541 27.473 273 128 7 17 221 49 319 1.49e-25 108
Msa0247410 MtrunA17_Chr3g0140631 25.283 265 137 5 17 221 34 297 2.40e-25 104
Msa0247410 MtrunA17_Chr3g0091311 50.000 102 50 1 11 112 4 104 5.02e-24 99.8
Msa0247410 MtrunA17_Chr5g0405421 28.464 267 119 6 19 215 98 362 6.97e-24 103
Msa0247410 MtrunA17_Chr5g0441691 27.757 263 120 8 20 214 68 328 2.39e-23 101
Msa0247410 MtrunA17_Chr4g0045371 26.471 306 151 12 19 251 22 326 5.18e-23 99.0
Msa0247410 MtrunA17_Chr3g0131181 28.846 260 115 8 20 211 29 286 5.99e-23 100
Msa0247410 MtrunA17_Chr4g0059951 26.199 271 130 7 19 221 72 340 6.03e-23 100
Msa0247410 MtrunA17_Chr8g0385341 27.692 260 118 7 20 211 30 287 3.96e-22 97.8
Msa0247410 MtrunA17_Chr7g0257751 27.099 262 121 7 19 212 57 316 6.87e-22 97.4
Msa0247410 MtrunA17_Chr3g0091421 48.515 101 51 1 12 112 5 104 1.34e-21 92.8
Msa0247410 MtrunA17_Chr3g0091421 53.333 75 31 1 113 187 166 236 4.21e-18 83.2
Msa0247410 MtrunA17_Chr7g0267771 25.969 258 125 6 20 211 88 345 2.94e-20 92.4
Msa0247410 MtrunA17_Chr8g0345801 26.908 249 112 7 17 197 12 258 6.84e-20 88.6
Msa0247410 MtrunA17_Chr3g0091411 30.435 207 104 7 11 206 4 181 8.43e-20 87.8
Msa0247410 MtrunA17_Chr1g0203881 27.758 281 131 11 19 231 40 316 1.02e-19 90.9
Msa0247410 MtrunA17_Chr4g0008561 27.010 311 139 10 17 257 16 308 3.92e-19 89.4
Msa0247410 MtrunA17_Chr5g0402661 35.345 116 68 3 116 225 172 286 1.28e-18 86.3
Msa0247410 MtrunA17_Chr5g0402661 40.217 92 51 1 19 110 17 104 1.79e-16 80.1
Msa0247410 MtrunA17_Chr3g0127571 25.362 276 134 8 18 222 136 410 4.60e-18 85.9
Msa0247410 MtrunA17_Chr4g0055431 35.000 140 76 4 106 235 151 285 1.02e-17 83.6
Msa0247410 MtrunA17_Chr8g0351491 24.265 272 144 7 5 217 4 272 3.50e-17 80.9
Msa0247410 MtrunA17_Chr4g0033371 39.496 119 57 6 99 213 224 331 2.36e-15 77.8
Msa0247410 MtrunA17_Chr4g0033371 36.607 112 69 2 19 129 71 181 5.45e-13 70.5
Msa0247410 MtrunA17_Chr4g0059751 36.893 103 59 2 116 213 252 353 6.69e-15 75.9
Msa0247410 MtrunA17_Chr4g0059751 32.979 94 56 2 20 106 89 182 5.23e-11 63.9
Msa0247410 MtrunA17_Chr8g0353621 22.957 257 139 5 20 217 10 266 8.18e-15 73.9
Msa0247410 MtrunA17_Chr1g0197721 43.333 90 51 0 20 109 51 140 1.17e-14 75.5
Msa0247410 MtrunA17_Chr7g0242561 35.433 127 68 5 99 221 207 323 1.59e-14 75.1
Msa0247410 MtrunA17_Chr1g0190131 32.710 107 67 2 119 221 168 273 4.08e-14 72.0
Msa0247410 MtrunA17_Chr7g0274941 22.814 263 137 7 19 215 15 277 5.15e-14 72.0
Msa0247410 MtrunA17_Chr4g0074811 38.614 101 56 4 119 215 254 352 9.06e-14 72.8
Msa0247410 MtrunA17_Chr4g0074811 37.363 91 56 1 20 109 91 181 5.55e-11 63.9
Msa0247410 MtrunA17_Chr1g0157131 40.594 101 54 4 119 215 237 335 9.44e-14 72.8
Msa0247410 MtrunA17_Chr8g0374701 38.318 107 60 4 111 213 287 391 1.69e-13 72.0
Msa0247410 MtrunA17_Chr3g0125381 33.654 104 66 2 116 217 109 211 2.86e-13 68.6
Msa0247410 MtrunA17_Chr5g0444171 37.736 106 60 4 119 220 255 358 3.13e-13 71.2
Msa0247410 MtrunA17_Chr5g0444171 37.363 91 56 1 20 109 92 182 1.25e-11 66.2
Msa0247410 MtrunA17_Chr4g0074791 38.614 101 56 4 119 215 259 357 3.58e-13 70.9
Msa0247410 MtrunA17_Chr4g0029241 31.313 99 68 0 113 211 279 377 4.38e-13 70.1
Msa0247410 MtrunA17_Chr0c02g0489761 33.333 120 66 4 99 214 229 338 4.77e-13 70.5
Msa0247410 MtrunA17_Chr1g0167311 38.318 107 58 5 113 213 311 415 5.54e-13 70.5
Msa0247410 MtrunA17_Chr3g0098951 38.614 101 56 3 119 215 247 345 8.21e-13 69.7
Msa0247410 MtrunA17_Chr3g0098951 37.363 91 56 1 20 109 84 174 1.51e-11 65.9
Msa0247410 MtrunA17_Chr3g0091291 29.469 207 98 8 64 226 4 206 9.18e-13 67.0
Msa0247410 MtrunA17_Chr2g0284021 35.849 106 65 2 258 362 16 119 1.09e-12 64.7
Msa0247410 MtrunA17_Chr1g0200601 34.314 102 61 3 114 211 188 287 1.34e-12 68.9
Msa0247410 MtrunA17_Chr1g0200601 38.462 91 55 1 20 109 30 120 1.30e-11 65.9
Msa0247410 MtrunA17_Chr1g0170281 35.238 105 61 4 119 218 281 383 1.45e-12 68.9
Msa0247410 MtrunA17_Chr1g0170281 36.264 91 57 1 20 109 118 208 2.49e-11 65.1
Msa0247410 MtrunA17_Chr5g0397101 37.624 101 57 4 118 214 229 327 2.15e-12 68.6
Msa0247410 MtrunA17_Chr1g0176421 31.061 132 77 4 88 215 301 422 6.01e-12 67.4
Msa0247410 MtrunA17_Chr1g0176421 34.066 91 59 1 20 109 161 251 9.27e-11 63.5
Msa0247410 MtrunA17_Chr4g0018201 36.782 87 55 0 20 106 759 845 6.27e-12 67.4
Msa0247410 MtrunA17_Chr4g0018201 38.372 86 49 2 119 201 949 1033 5.67e-11 64.7
Msa0247410 MtrunA17_Chr5g0428981 36.782 87 55 0 20 106 763 849 6.44e-12 67.4
Msa0247410 MtrunA17_Chr6g0478601 32.609 92 62 0 15 106 106 197 7.86e-12 66.6
Msa0247410 MtrunA17_Chr2g0326531 31.633 98 67 0 114 211 282 379 9.01e-12 66.2
Msa0247410 MtrunA17_Chr3g0132591 34.694 98 58 3 119 212 265 360 1.15e-11 66.2
Msa0247410 MtrunA17_Chr4g0045261 35.135 111 65 5 111 217 296 403 1.19e-11 66.2
Msa0247410 MtrunA17_Chr2g0299781 34.862 109 62 5 113 214 316 422 1.54e-11 65.9
Msa0247410 MtrunA17_Chr1g0167351 37.963 108 58 6 113 213 306 411 1.61e-11 65.9
Msa0247410 MtrunA17_Chr7g0256001 35.849 106 62 4 111 212 300 403 6.70e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0247410 AT3G17510.2 68.045 266 82 1 111 376 94 356 1.89e-118 348
Msa0247410 AT3G17510.1 68.045 266 82 1 111 376 174 436 1.26e-117 349
Msa0247410 AT1G48260.2 63.396 265 89 3 111 374 80 337 2.45e-114 337
Msa0247410 AT1G48260.4 63.396 265 89 3 111 374 80 337 2.45e-114 337
Msa0247410 AT1G48260.3 63.396 265 89 3 111 374 80 337 2.45e-114 337
Msa0247410 AT1G48260.5 63.396 265 89 3 111 374 80 337 2.45e-114 337
Msa0247410 AT1G48260.1 63.396 265 89 3 111 374 165 422 1.04e-113 339
Msa0247410 AT1G48260.1 65.741 108 36 1 13 119 4 111 1.36e-34 132
Msa0247410 AT5G35410.1 37.868 441 205 7 13 387 4 441 1.11e-99 303
Msa0247410 AT4G24400.1 37.972 424 194 6 14 371 3 423 1.57e-96 295
Msa0247410 AT2G26980.3 39.723 433 190 10 4 373 1 425 4.41e-91 281
Msa0247410 AT2G26980.4 39.723 433 190 10 4 373 11 435 8.05e-91 281
Msa0247410 AT4G24400.2 37.440 414 193 5 14 362 3 415 4.52e-89 275
Msa0247410 AT5G35410.2 38.753 369 164 4 13 319 4 372 6.27e-88 271
Msa0247410 AT5G45820.1 36.667 420 186 7 14 368 6 410 9.45e-88 273
Msa0247410 AT5G57630.1 37.470 419 186 7 16 373 8 411 5.43e-87 270
Msa0247410 AT5G57630.2 37.226 411 182 7 16 365 8 403 8.03e-84 261
Msa0247410 AT1G30270.3 47.925 265 134 3 111 373 88 350 5.81e-83 258
Msa0247410 AT1G30270.1 47.925 265 134 3 111 373 185 447 3.48e-82 259
Msa0247410 AT1G30270.1 62.766 94 35 0 17 110 28 121 6.06e-33 129
Msa0247410 AT1G30270.2 47.925 265 134 3 111 373 185 447 4.31e-82 259
Msa0247410 AT1G30270.2 62.766 94 35 0 17 110 28 121 6.48e-33 129
Msa0247410 AT5G21326.1 46.212 264 137 2 110 373 166 424 5.88e-82 258
Msa0247410 AT5G21326.1 62.000 100 37 1 16 114 9 108 1.87e-31 124
Msa0247410 AT5G58380.1 34.906 424 196 6 19 365 11 431 7.99e-82 258
Msa0247410 AT2G26980.5 39.500 400 171 10 4 340 1 392 3.21e-79 250
Msa0247410 AT1G01140.1 46.617 266 132 5 111 373 173 431 2.58e-78 248
Msa0247410 AT1G01140.1 61.458 96 37 0 15 110 14 109 1.10e-31 125
Msa0247410 AT1G01140.3 47.104 259 127 5 111 366 173 424 3.10e-78 248
Msa0247410 AT1G01140.3 61.458 96 37 0 15 110 14 109 1.24e-31 125
Msa0247410 AT2G26980.1 39.842 379 159 9 4 319 1 373 2.07e-77 244
Msa0247410 AT1G01140.2 46.269 268 132 6 111 373 173 433 2.59e-76 243
Msa0247410 AT1G01140.2 61.458 96 37 0 15 110 14 109 1.11e-31 125
Msa0247410 AT5G01810.1 35.629 421 189 8 11 367 4 406 1.61e-72 233
Msa0247410 AT5G01810.2 35.629 421 189 8 11 367 4 406 1.61e-72 233
Msa0247410 AT3G23000.1 36.490 359 144 7 15 310 20 357 6.78e-71 229
Msa0247410 AT4G14580.1 35.310 371 157 7 9 315 11 362 5.82e-67 218
Msa0247410 AT5G10930.1 43.462 260 138 5 109 365 164 417 6.29e-62 206
Msa0247410 AT5G10930.1 48.113 106 54 1 11 115 3 108 8.19e-25 105
Msa0247410 AT5G25110.1 34.211 418 199 11 15 365 38 446 5.14e-61 204
Msa0247410 AT4G18700.1 39.852 271 143 5 111 366 179 444 6.91e-61 204
Msa0247410 AT4G18700.1 49.057 106 54 0 9 114 15 120 1.19e-26 111
Msa0247410 AT5G45810.1 39.130 276 145 4 111 368 181 451 7.24e-61 204
Msa0247410 AT5G45810.1 53.061 98 46 0 17 114 25 122 6.57e-28 115
Msa0247410 AT4G30960.1 39.300 257 145 4 111 366 177 423 1.09e-59 200
Msa0247410 AT4G30960.1 53.608 97 45 0 18 114 22 118 6.33e-23 100
Msa0247410 AT2G25090.1 32.715 431 203 12 14 367 9 429 4.91e-57 194
Msa0247410 AT1G29230.1 36.559 279 144 4 111 368 227 493 7.79e-57 194
Msa0247410 AT1G29230.1 43.846 130 62 1 15 144 69 187 3.85e-26 110
Msa0247410 AT5G57630.3 39.924 263 141 5 113 373 76 323 2.95e-56 187
Msa0247410 AT5G07070.1 38.314 261 155 4 108 365 162 419 7.01e-55 187
Msa0247410 AT5G07070.1 48.958 96 49 0 19 114 11 106 2.31e-25 107
Msa0247410 AT2G34180.1 36.101 277 145 6 111 368 210 473 1.37e-54 188
Msa0247410 AT2G34180.1 49.074 108 54 1 8 115 46 152 6.68e-25 106
Msa0247410 AT2G30360.1 39.015 264 138 6 105 365 169 412 7.23e-54 184
Msa0247410 AT2G30360.1 54.639 97 39 2 17 110 18 112 5.04e-23 100
Msa0247410 AT3G01090.3 37.354 257 101 2 17 213 16 272 5.88e-53 184
Msa0247410 AT3G01090.1 37.354 257 101 2 17 213 16 272 5.88e-53 184
Msa0247410 AT3G01090.2 37.354 257 101 2 17 213 39 295 7.51e-53 184
Msa0247410 AT2G38490.1 30.769 429 203 10 11 371 19 421 3.21e-51 177
Msa0247410 AT2G26980.2 41.313 259 86 8 4 199 1 256 2.72e-50 170
Msa0247410 AT5G01810.3 37.175 269 102 5 11 215 4 269 2.77e-50 173
Msa0247410 AT3G29160.3 35.798 257 105 2 17 213 17 273 7.80e-50 172
Msa0247410 AT5G01820.1 38.550 262 143 4 105 365 168 412 8.95e-50 174
Msa0247410 AT5G01820.1 44.792 96 53 0 17 112 19 114 3.94e-21 95.1
Msa0247410 AT3G29160.1 35.798 257 105 2 17 213 17 273 2.64e-48 171
Msa0247410 AT3G29160.2 35.798 257 105 2 17 213 17 273 2.64e-48 171
Msa0247410 AT5G21222.1 56.911 123 53 0 110 232 166 288 3.41e-44 164
Msa0247410 AT5G21222.1 57.895 95 40 0 17 111 10 104 2.66e-28 117
Msa0247410 AT5G21222.2 56.911 123 53 0 110 232 166 288 3.41e-44 164
Msa0247410 AT5G21222.2 57.895 95 40 0 17 111 10 104 2.66e-28 117
Msa0247410 AT5G21222.4 56.911 123 53 0 110 232 166 288 3.41e-44 164
Msa0247410 AT5G21222.4 57.895 95 40 0 17 111 10 104 2.66e-28 117
Msa0247410 AT5G21222.3 56.911 123 53 0 110 232 166 288 3.41e-44 164
Msa0247410 AT5G21222.3 57.895 95 40 0 17 111 10 104 2.66e-28 117
Msa0247410 AT5G39440.1 32.270 282 124 4 17 232 16 296 2.47e-43 157
Msa0247410 AT5G63650.1 30.537 298 128 8 17 244 1 289 1.75e-36 136
Msa0247410 AT4G33950.2 28.912 294 136 8 19 244 20 308 1.16e-33 128
Msa0247410 AT3G50500.1 29.927 274 119 8 19 224 22 290 7.39e-32 124
Msa0247410 AT1G60940.1 28.254 315 145 9 17 259 1 306 2.15e-31 122
Msa0247410 AT1G60940.2 28.254 315 145 9 17 259 1 306 2.15e-31 122
Msa0247410 AT2G25880.2 29.130 230 134 4 20 221 25 253 1.44e-30 118
Msa0247410 AT5G66880.1 30.292 274 118 9 19 224 21 289 1.57e-30 120
Msa0247410 AT5G66880.2 30.292 274 118 9 19 224 21 289 1.57e-30 120
Msa0247410 AT1G10940.1 29.530 298 131 10 17 244 1 289 2.62e-29 117
Msa0247410 AT4G40010.1 28.723 282 127 10 19 232 3 278 2.21e-27 111
Msa0247410 AT2G23030.1 29.474 285 124 10 17 233 1 276 6.54e-26 107
Msa0247410 AT5G12180.1 29.658 263 115 8 20 214 73 333 1.33e-25 108
Msa0247410 AT2G25880.1 25.954 262 133 5 20 221 25 285 1.64e-25 105
Msa0247410 AT2G25880.4 25.954 262 133 5 20 221 38 298 1.83e-25 105
Msa0247410 AT2G41860.1 27.306 271 127 7 19 221 53 321 3.21e-25 107
Msa0247410 AT2G41860.2 27.306 271 127 7 19 221 53 321 3.57e-25 107
Msa0247410 AT4G32830.1 25.283 265 137 5 17 221 28 291 4.66e-25 103
Msa0247410 AT2G25880.3 25.954 262 133 5 20 221 86 346 8.44e-25 104
Msa0247410 AT4G36070.2 29.213 267 117 7 19 215 70 334 2.86e-24 105
Msa0247410 AT4G36070.1 29.213 267 117 7 19 215 70 334 3.06e-24 104
Msa0247410 AT5G19360.1 29.278 263 116 8 20 214 68 328 3.23e-24 104
Msa0247410 AT2G17890.1 28.378 296 128 9 2 215 78 371 8.42e-24 103
Msa0247410 AT5G12480.1 27.203 261 120 7 19 211 58 316 8.56e-24 103
Msa0247410 AT5G19450.2 25.926 270 130 7 20 221 57 324 1.73e-23 102
Msa0247410 AT5G19450.1 25.926 270 130 7 20 221 57 324 1.73e-23 102
Msa0247410 AT3G57530.1 26.568 271 129 7 19 221 62 330 4.33e-23 101
Msa0247410 AT4G33950.1 26.207 290 149 10 19 244 20 308 4.51e-23 99.8
Msa0247410 AT3G08720.1 27.170 265 126 6 14 213 134 396 5.12e-23 100
Msa0247410 AT3G08720.3 27.170 265 126 6 14 213 134 396 5.12e-23 100
Msa0247410 AT3G08720.4 27.170 265 126 6 14 213 134 396 5.12e-23 100
Msa0247410 AT3G08720.2 27.170 265 126 6 14 213 134 396 5.12e-23 100
Msa0247410 AT5G08590.1 26.621 293 145 11 17 244 1 288 7.16e-23 99.0
Msa0247410 AT1G10940.2 27.815 302 139 11 17 244 1 297 1.02e-22 99.0
Msa0247410 AT3G08730.1 27.076 277 134 7 14 225 128 401 1.14e-22 99.8
Msa0247410 AT3G08730.2 27.076 277 134 7 14 225 128 401 1.14e-22 99.8
Msa0247410 AT3G50500.2 39.231 130 68 4 105 224 169 297 6.10e-22 96.7
Msa0247410 AT3G50500.2 36.170 94 56 1 19 112 22 111 1.07e-13 72.4
Msa0247410 AT2G45490.1 24.254 268 138 5 13 218 15 279 7.22e-22 95.1
Msa0247410 AT3G57530.2 26.667 270 130 8 19 221 62 330 7.44e-22 97.1
Msa0247410 AT5G66210.5 27.574 272 125 7 20 221 62 331 1.95e-21 96.3
Msa0247410 AT2G31500.1 26.296 270 131 7 19 221 65 333 2.13e-21 96.7
Msa0247410 AT5G66210.6 27.574 272 125 7 20 221 62 331 2.22e-21 95.5
Msa0247410 AT5G66210.4 27.574 272 125 7 20 221 62 331 2.22e-21 95.5
Msa0247410 AT5G66210.1 27.574 272 125 7 20 221 62 331 2.43e-21 96.3
Msa0247410 AT5G66210.2 27.574 272 125 7 20 221 62 331 2.43e-21 96.3
Msa0247410 AT5G66210.3 27.574 272 125 7 20 221 62 331 2.94e-21 95.9
Msa0247410 AT5G60550.1 27.820 266 119 7 26 218 113 378 8.50e-21 93.6
Msa0247410 AT2G35890.2 25.000 268 130 8 20 218 132 397 3.13e-20 92.8
Msa0247410 AT2G35890.1 25.000 268 130 8 20 218 132 397 3.13e-20 92.8
Msa0247410 AT1G78290.3 39.286 112 58 3 111 212 149 260 3.25e-20 91.3
Msa0247410 AT1G78290.3 41.489 94 51 1 19 112 3 92 1.01e-16 81.3
Msa0247410 AT1G78290.2 39.286 112 58 3 111 212 149 260 3.25e-20 91.3
Msa0247410 AT1G78290.2 41.489 94 51 1 19 112 3 92 1.01e-16 81.3
Msa0247410 AT5G08590.2 35.294 136 76 4 116 244 82 212 3.59e-20 90.1
Msa0247410 AT1G18890.1 25.461 271 132 7 19 221 62 330 3.75e-20 92.8
Msa0247410 AT1G12580.1 26.136 264 125 9 19 214 43 304 7.10e-20 91.7
Msa0247410 AT1G74740.1 25.092 271 133 7 19 221 58 326 9.48e-20 91.3
Msa0247410 AT2G45490.2 24.280 243 119 5 13 193 15 254 1.78e-17 82.0
Msa0247410 AT3G53930.1 26.277 274 122 10 12 216 14 276 2.08e-16 81.6
Msa0247410 AT3G53930.2 26.277 274 122 10 12 216 14 276 2.10e-16 81.6
Msa0247410 AT3G51850.3 35.433 127 68 5 99 221 205 321 8.04e-15 75.9
Msa0247410 AT3G51850.2 35.433 127 68 5 99 221 205 321 8.50e-15 76.3
Msa0247410 AT3G51850.1 35.433 127 68 5 99 221 205 321 1.23e-14 75.9
Msa0247410 AT4G04740.2 41.346 104 55 3 119 218 232 333 1.26e-14 75.9
Msa0247410 AT4G04740.4 41.346 104 55 3 119 218 232 333 1.31e-14 75.9
Msa0247410 AT4G04740.6 41.346 104 55 3 119 218 232 333 1.31e-14 75.9
Msa0247410 AT4G04740.5 41.346 104 55 3 119 218 232 333 1.31e-14 75.9
Msa0247410 AT4G04740.3 41.346 104 55 3 119 218 232 333 1.31e-14 75.9
Msa0247410 AT4G04740.1 41.346 104 55 3 119 218 232 333 1.31e-14 75.9
Msa0247410 AT4G04740.7 41.346 104 55 3 119 218 232 333 1.31e-14 75.9
Msa0247410 AT1G50240.3 24.000 275 139 7 20 234 6 270 1.91e-14 75.9
Msa0247410 AT1G50240.2 24.000 275 139 7 20 234 6 270 1.91e-14 75.9
Msa0247410 AT3G50530.2 38.182 110 62 4 109 214 336 443 3.08e-14 74.7
Msa0247410 AT2G37840.1 25.352 284 132 9 9 225 3 273 3.18e-14 74.7
Msa0247410 AT5G12480.2 36.752 117 60 5 99 211 116 222 3.74e-14 73.9
Msa0247410 AT4G04720.2 39.423 104 57 4 119 218 243 344 4.89e-14 73.9
Msa0247410 AT4G04720.2 36.264 91 57 1 20 109 80 170 1.71e-12 69.3
Msa0247410 AT4G04720.1 39.423 104 57 4 119 218 243 344 4.89e-14 73.9
Msa0247410 AT4G04720.1 36.264 91 57 1 20 109 80 170 1.71e-12 69.3
Msa0247410 AT5G04510.3 38.462 91 56 0 20 110 44 134 5.66e-14 72.4
Msa0247410 AT5G04510.2 38.462 91 56 0 20 110 44 134 6.15e-14 73.2
Msa0247410 AT3G10540.1 40.659 91 54 0 20 110 45 135 7.99e-14 73.2
Msa0247410 AT5G04510.1 38.462 91 56 0 20 110 44 134 9.67e-14 73.2
Msa0247410 AT3G50530.1 37.963 108 61 4 111 214 307 412 1.19e-13 72.8
Msa0247410 AT4G23650.1 40.594 101 54 4 118 214 240 338 1.61e-13 72.4
Msa0247410 AT1G45160.1 33.696 92 61 0 15 106 665 756 2.74e-13 72.0
Msa0247410 AT1G45160.2 33.696 92 61 0 15 106 665 756 3.18e-13 72.0
Msa0247410 AT2G37840.2 37.288 118 60 4 112 225 29 136 4.14e-13 71.2
Msa0247410 AT3G61960.2 39.326 89 53 1 17 105 7 94 4.58e-13 71.2
Msa0247410 AT3G61960.2 31.387 137 79 4 86 217 138 264 5.24e-13 70.9
Msa0247410 AT3G61960.1 39.326 89 53 1 17 105 7 94 5.16e-13 70.9
Msa0247410 AT3G61960.1 31.387 137 79 4 86 217 138 264 5.84e-13 70.9
Msa0247410 AT4G04695.1 35.714 112 65 4 109 215 184 293 1.21e-12 69.7
Msa0247410 AT4G04700.1 37.273 110 65 3 4 109 9 118 1.80e-12 68.9
Msa0247410 AT4G04700.1 35.294 102 60 2 118 215 194 293 2.46e-11 65.5
Msa0247410 AT4G21940.3 36.538 104 60 4 119 218 265 366 1.98e-12 68.9
Msa0247410 AT4G21940.1 36.538 104 60 4 119 218 265 366 2.06e-12 68.9
Msa0247410 AT4G21940.2 36.538 104 60 4 119 218 265 366 2.37e-12 68.9
Msa0247410 AT3G10660.2 33.628 113 68 4 111 218 341 451 2.48e-12 68.9
Msa0247410 AT3G10660.2 35.165 91 58 1 20 109 186 276 4.76e-12 68.2
Msa0247410 AT3G10660.1 33.628 113 68 4 111 218 341 451 2.48e-12 68.9
Msa0247410 AT3G10660.1 35.165 91 58 1 20 109 186 276 4.76e-12 68.2
Msa0247410 AT5G04870.1 32.743 113 69 4 111 218 305 415 2.92e-12 68.6
Msa0247410 AT5G04870.1 35.165 91 58 1 20 109 150 240 2.76e-11 65.5
Msa0247410 AT2G38910.1 35.165 91 58 1 20 109 134 224 4.24e-12 68.2
Msa0247410 AT2G38910.1 30.827 133 78 4 85 213 271 393 9.46e-12 67.0
Msa0247410 AT1G61950.1 37.624 101 57 4 119 215 262 360 6.42e-12 67.4
Msa0247410 AT1G61950.1 34.409 93 60 1 19 110 97 189 1.43e-11 66.2
Msa0247410 AT3G20410.2 34.653 101 60 3 119 215 254 352 7.31e-12 67.4
Msa0247410 AT3G20410.1 34.653 101 60 3 119 215 254 352 7.31e-12 67.4
Msa0247410 AT1G49580.1 36.036 111 64 5 111 217 309 416 7.55e-12 67.4
Msa0247410 AT4G09570.1 24.498 249 122 7 20 202 25 273 8.29e-12 67.0
Msa0247410 AT3G45240.2 31.683 101 69 0 111 211 268 368 8.90e-12 66.6
Msa0247410 AT3G45240.1 31.683 101 69 0 111 211 268 368 8.90e-12 66.6
Msa0247410 AT5G62310.1 35.632 87 56 0 20 106 754 840 8.97e-12 67.4
Msa0247410 AT5G62310.1 33.019 106 64 3 115 214 941 1045 2.40e-11 66.2
Msa0247410 AT3G45240.3 31.683 101 69 0 111 211 265 365 9.04e-12 66.6
Msa0247410 AT1G76040.3 36.735 98 56 4 119 212 275 370 1.31e-11 66.6
Msa0247410 AT1G76040.2 35.644 101 59 4 118 214 274 372 1.34e-11 66.6
Msa0247410 AT3G19100.1 37.273 110 62 5 111 216 303 409 1.46e-11 66.6
Msa0247410 AT1G50700.3 33.663 101 61 3 119 215 236 334 1.58e-11 66.2
Msa0247410 AT1G50700.1 33.663 101 61 3 119 215 236 334 1.69e-11 66.2
Msa0247410 AT1G50700.2 33.663 101 61 3 119 215 236 334 1.85e-11 66.2
Msa0247410 AT3G17850.1 34.483 87 57 0 20 106 882 968 2.33e-11 66.2
Msa0247410 AT1G12680.1 34.545 110 65 4 108 212 248 355 3.07e-11 65.1
Msa0247410 AT1G48490.3 32.609 92 62 0 15 106 823 914 4.35e-11 65.5
Msa0247410 AT1G48490.2 32.609 92 62 0 15 106 823 914 4.35e-11 65.5
Msa0247410 AT1G48490.1 32.609 92 62 0 15 106 823 914 4.35e-11 65.5
Msa0247410 AT1G48490.4 32.609 92 62 0 15 106 824 915 4.39e-11 65.5
Msa0247410 AT4G35310.2 33.000 100 61 3 119 214 260 357 5.02e-11 64.7
Msa0247410 AT4G35310.1 33.000 100 61 3 119 214 260 357 5.02e-11 64.7
Msa0247410 AT5G24430.1 36.458 96 57 2 18 109 141 236 5.14e-11 64.7
Msa0247410 AT1G35670.1 37.363 91 56 1 20 109 26 116 8.90e-11 63.9

Find 122 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACTTGGTGAAGGAAATTT+TGG 0.114467 2_2:-29555147 Msa0247410:CDS
CTCAAGTACCATATAAATTT+TGG 0.154879 2_2:+29551655 None:intergenic
AAGGGGAAATTTACATTATC+TGG 0.170337 2_2:+29549063 None:intergenic
TCTATGCAATGCTTGATTTA+TGG 0.175424 2_2:+29555342 None:intergenic
TTGATAAGTGCTGGTGATTT+TGG 0.200653 2_2:+29549934 None:intergenic
ATCTCAGGAGCAACATAATT+TGG 0.231813 2_2:+29550644 None:intergenic
TCCTCATCCTCTAGATTTGC+AGG 0.233822 2_2:+29550252 None:intergenic
GAAGGAAAAGTAGTGCAATT+AGG 0.254465 2_2:-29555189 Msa0247410:CDS
CAAAGAAGATGAATGGTTTA+AGG 0.264653 2_2:-29550286 Msa0247410:CDS
ATCTTCTCAGTCAAATCTTT+TGG 0.270506 2_2:+29549652 None:intergenic
TCCAGCCATTGAAACTCTTT+AGG 0.299758 2_2:-29548995 Msa0247410:three_prime_UTR
AAACGAATCGGCTATAAATA+AGG 0.302014 2_2:+29555453 None:intergenic
TTGGACTCTGGTCTCCTTCA+AGG 0.306918 2_2:+29549953 None:intergenic
ATCAATGCATTTCAGTTGAT+AGG 0.321929 2_2:-29549916 Msa0247410:CDS
CCAGCCATTGAAACTCTTTA+GGG 0.327302 2_2:-29548994 Msa0247410:three_prime_UTR
TAACCCACCAGAAAACAAAA+AGG 0.330868 2_2:+29549044 None:intergenic
CGCGCCATCATAGCCTCTAT+TGG 0.334596 2_2:+29550616 None:intergenic
ATGGCGCGAAATCGGATATT+TGG 0.336630 2_2:-29550601 Msa0247410:CDS
TAGCAAAACCAAAATTTATA+TGG 0.349891 2_2:-29551663 Msa0247410:CDS
GCAATTAGGGAAATACGAAT+TGG 0.349912 2_2:-29555175 Msa0247410:CDS
GAGTGATTTGCTTCCTACTA+TGG 0.361254 2_2:-29548972 Msa0247410:three_prime_UTR
TTCAAAAGTATACCACTTCA+TGG 0.361293 2_2:+29550181 None:intergenic
AAGGAAAAGTAGTGCAATTA+GGG 0.362891 2_2:-29555188 Msa0247410:CDS
AATTGATTATAAATAGGATT+AGG 0.365378 2_2:+29555512 None:intergenic
CCTCTATTGGCAAGAATCTC+AGG 0.368166 2_2:+29550629 None:intergenic
CGAGGACATTGTAATCGAAA+TGG 0.371102 2_2:-29549629 Msa0247410:CDS
AGGCTATGATGGCGCGAAAT+CGG 0.376797 2_2:-29550609 Msa0247410:CDS
TGGACTCTGGTCTCCTTCAA+GGG 0.401085 2_2:+29549954 None:intergenic
CATGCCATTTGAAATTGAAT+TGG 0.403684 2_2:-29548854 Msa0247410:three_prime_UTR
CCCTAAAGAGTTTCAATGGC+TGG 0.404080 2_2:+29548994 None:intergenic
ATCTTATATGTAATTCTAAC+GGG 0.411231 2_2:-29550566 Msa0247410:CDS
TCGTATAATCTAACAACATT+TGG 0.412927 2_2:+29554758 None:intergenic
TTGGGTATAGCCGAGGCGGC+AGG 0.417326 2_2:-29549134 Msa0247410:CDS
TGTAGTAATTGTGAGTTAAG+AGG 0.417902 2_2:+29555385 None:intergenic
TGAGGAAGAAGAAGAGGAAG+AGG 0.429775 2_2:-29550235 Msa0247410:CDS
TGATCTTAATAACACTGATC+AGG 0.430259 2_2:-29555049 Msa0247410:intron
AGGAATAAGAATGGATCAAA+TGG 0.438006 2_2:+29555532 None:intergenic
GTGGAACTAAGGAAGTCTTA+TGG 0.440150 2_2:-29549290 Msa0247410:CDS
TTCACCAATTCAATTTCAAA+TGG 0.441681 2_2:+29548850 None:intergenic
TGATCATATCCATCGTTACT+CGG 0.444167 2_2:+29550307 None:intergenic
ATTTGATGTAGTTATGCAAA+AGG 0.449669 2_2:-29549169 Msa0247410:intron
GTTGAAAATTTCAGATAAAG+AGG 0.456693 2_2:-29554811 Msa0247410:intron
TGCTTCCTACTATGGTCCTA+TGG 0.457263 2_2:-29548964 Msa0247410:three_prime_UTR
CCTGAGATTCTTGCCAATAG+AGG 0.457971 2_2:-29550629 Msa0247410:CDS
TAGAGCCATAGGACCATAGT+AGG 0.458877 2_2:+29548959 None:intergenic
CAAGTGTGCAACTAAGAAAC+AGG 0.460358 2_2:+29555415 None:intergenic
TATTCGTTACAGCCCCTTGA+AGG 0.462501 2_2:-29549967 Msa0247410:intron
GTTATAGAGAAGAGGGTCGT+TGG 0.465803 2_2:-29555244 Msa0247410:five_prime_UTR
AGCAAAGAAAAGTGTTGGGT+TGG 0.467815 2_2:-29555575 Msa0247410:five_prime_UTR
AAGAAAGCAAAGAAAAGTGT+TGG 0.471949 2_2:-29555580 Msa0247410:five_prime_UTR
GCAAGATTTCTGTCATCAAA+AGG 0.472913 2_2:+29550536 None:intergenic
TCAATGCATTTCAGTTGATA+GGG 0.479196 2_2:-29549915 Msa0247410:CDS
CAAAAGGTTATCGAACGACT+TGG 0.480952 2_2:-29549153 Msa0247410:CDS
AATAGGATTAGGAATAAGAA+TGG 0.482776 2_2:+29555523 None:intergenic
AGAAACAGGTGGAATGGTAA+TGG 0.483912 2_2:+29555429 None:intergenic
CACTCCCTAAAGAGTTTCAA+TGG 0.484285 2_2:+29548990 None:intergenic
GAGGACATTGTAATCGAAAT+GGG 0.484481 2_2:-29549628 Msa0247410:CDS
TTGCAACAGGTGTTTGAAGT+TGG 0.490073 2_2:-29549329 Msa0247410:intron
TCTTGCAGTTCTCTATCAAA+AGG 0.491376 2_2:-29550519 Msa0247410:intron
AGAGGATGAGGAAGAAGAAG+AGG 0.492489 2_2:-29550241 Msa0247410:CDS
CTTTGTATGTAGTGGAACTA+AGG 0.492631 2_2:-29549301 Msa0247410:CDS
GCTTACTAGCCCTGCCGCCT+CGG 0.493231 2_2:+29549124 None:intergenic
GCACCAGGTGACAGCCATCT+TGG 0.494552 2_2:+29550372 None:intergenic
GTAGTAATTGTGAGTTAAGA+GGG 0.498685 2_2:+29555386 None:intergenic
TTATAGAGAAGAGGGTCGTT+GGG 0.499567 2_2:-29555243 Msa0247410:five_prime_UTR
AATCAAGCAAGAAGGATTGA+AGG 0.501113 2_2:-29555207 Msa0247410:CDS
GAGAAGAGGGTCGTTGGGAA+TGG 0.501276 2_2:-29555238 Msa0247410:exon
AACATAATTTGGACTTCCAC+AGG 0.505590 2_2:+29550655 None:intergenic
GCAAAGAAAAGTGTTGGGTT+GGG 0.506272 2_2:-29555574 Msa0247410:five_prime_UTR
ATGGTACTTGAGTACGTGAA+TGG 0.508717 2_2:-29551644 Msa0247410:CDS
TGGTCCATCTTTGTATGTAG+TGG 0.509865 2_2:-29549309 Msa0247410:CDS
TCCTGCAAATCTAGAGGATG+AGG 0.510365 2_2:-29550253 Msa0247410:CDS
CAATTAGGGAAATACGAATT+GGG 0.510603 2_2:-29555174 Msa0247410:CDS
GTGTGAAAATTCCAGGCAGA+TGG 0.511222 2_2:-29550692 Msa0247410:intron
GATAAAGCTCATAAAAGCCT+AGG 0.514335 2_2:-29549469 Msa0247410:CDS
CTTGCCAATAGAGGCTATGA+TGG 0.517770 2_2:-29550620 Msa0247410:CDS
TTAGCTATATTAGATGTCCT+AGG 0.518254 2_2:-29549024 Msa0247410:three_prime_UTR
CAATGGCTGGATTCAAACCT+AGG 0.519025 2_2:+29549007 None:intergenic
TCTTCATGCTTAGACCTCTC+CGG 0.519972 2_2:-29549889 Msa0247410:CDS
TATCTTATATGTAATTCTAA+CGG 0.521610 2_2:-29550567 Msa0247410:CDS
AGAAAGCAAAGAAAAGTGTT+GGG 0.521830 2_2:-29555579 Msa0247410:five_prime_UTR
AGAAGATGAATGGTTTAAGG+AGG 0.525450 2_2:-29550283 Msa0247410:CDS
TACTATGGTCCTATGGCTCT+AGG 0.527010 2_2:-29548957 Msa0247410:three_prime_UTR
GATCATATCCATCGTTACTC+GGG 0.529709 2_2:+29550308 None:intergenic
TTGAAAATTTCAGATAAAGA+GGG 0.529733 2_2:-29554810 Msa0247410:intron
AGTCTAATTCCTAGAGCCAT+AGG 0.532907 2_2:+29548948 None:intergenic
AAAGTATACCACTTCATGGA+TGG 0.534265 2_2:+29550185 None:intergenic
CTGCCACCGAGAGGCTACCT+AGG 0.545122 2_2:+29549452 None:intergenic
GGACTCTGGTCTCCTTCAAG+GGG 0.546103 2_2:+29549955 None:intergenic
GAAGATGAATGGTTTAAGGA+GGG 0.549781 2_2:-29550282 Msa0247410:CDS
AATGGTAATGGAAAACGAAT+CGG 0.553392 2_2:+29555441 None:intergenic
ACTTGAACTCTAGGATGTCT+CGG 0.555761 2_2:-29549707 Msa0247410:intron
AGTTCCACTACATACAAAGA+TGG 0.564355 2_2:+29549305 None:intergenic
ATACCAAGATGGCTGTCACC+TGG 0.565793 2_2:-29550375 Msa0247410:CDS
ATATGATCAAAGAAGATGAA+TGG 0.569077 2_2:-29550293 Msa0247410:CDS
GTCTTTGCAGTTACGTGCGG+AGG 0.570652 2_2:-29548922 Msa0247410:three_prime_UTR
CAACTAAGAAACAGGTGGAA+TGG 0.575325 2_2:+29555423 None:intergenic
TCCTAAAACCCGAGTAACGA+TGG 0.576903 2_2:-29550316 Msa0247410:CDS
TGAAATGCATTGATAAGTGC+TGG 0.579435 2_2:+29549925 None:intergenic
TTGGCTAGAGATACTGATTG+TGG 0.590298 2_2:-29555114 Msa0247410:CDS
TAGCCTCTCGGTGGCAGCAG+AGG 0.590738 2_2:-29549446 Msa0247410:intron
TGGGTATAGCCGAGGCGGCA+GGG 0.590825 2_2:-29549133 Msa0247410:CDS
TCAGTTGAAAGTGATACAAG+AGG 0.597237 2_2:-29549491 Msa0247410:intron
TGATCATAAATCAAGCAAGA+AGG 0.602859 2_2:-29555215 Msa0247410:CDS
AAAAGGTTATCGAACGACTT+GGG 0.625083 2_2:-29549152 Msa0247410:CDS
AGCAGATACAAACAAAACAA+AGG 0.625713 2_2:-29555616 Msa0247410:five_prime_UTR
TTAGTCTTTGCAGTTACGTG+CGG 0.631282 2_2:-29548925 Msa0247410:three_prime_UTR
TGTGAAAATTCCAGGCAGAT+GGG 0.633379 2_2:-29550691 Msa0247410:intron
TTATAATCCTGCAAATCTAG+AGG 0.638578 2_2:-29550259 Msa0247410:CDS
AAATCGGATATTTGGTCATG+CGG 0.649847 2_2:-29550593 Msa0247410:CDS
CAGATGTTCAGATACCAAGA+TGG 0.651672 2_2:-29550386 Msa0247410:CDS
GAACGACTTGGGTATAGCCG+AGG 0.654386 2_2:-29549141 Msa0247410:CDS
CGACTTGGGTATAGCCGAGG+CGG 0.657029 2_2:-29549138 Msa0247410:CDS
GTACTTGAGTACGTGAATGG+AGG 0.671385 2_2:-29551641 Msa0247410:CDS
TAAAAGCCTAGGTAGCCTCT+CGG 0.671920 2_2:-29549458 Msa0247410:CDS
GGGTTGCTGCATACAACCTG+TGG 0.673752 2_2:-29550671 Msa0247410:CDS
GTGTGCAACTAAGAAACAGG+TGG 0.682957 2_2:+29555418 None:intergenic
TTACCTCTGCTGCCACCGAG+AGG 0.682969 2_2:+29549443 None:intergenic
AACTCTAGGATGTCTCGGAG+AGG 0.692156 2_2:-29549702 Msa0247410:intron
AGATTTGACTGAGAAGATCG+AGG 0.701255 2_2:-29549647 Msa0247410:CDS
AAATGTTGTTAGATTATACG+AGG 0.707766 2_2:-29554756 Msa0247410:intron
AAGCCTAGGTAGCCTCTCGG+TGG 0.715690 2_2:-29549455 Msa0247410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTTAAAACAAGTA+TGG - chr2_2:29549968-29549987 Msa0247410:intron 10.0%
!!! ATTACTAAAATAAGATTTTA+TGG + chr2_2:29550246-29550265 None:intergenic 10.0%
!! TGAAATATTAATCTAAATTT+GGG + chr2_2:29550733-29550752 None:intergenic 10.0%
!! TTGAAATATTAATCTAAATT+TGG + chr2_2:29550734-29550753 None:intergenic 10.0%
!!! TTTGTATTTTAATGAATATT+TGG + chr2_2:29550770-29550789 None:intergenic 10.0%
!!! TTAGAGTTTTTAATTATTAT+TGG - chr2_2:29551280-29551299 Msa0247410:intron 10.0%
!!! TCTTTGATTTTTTTTTTAAA+TGG - chr2_2:29551807-29551826 Msa0247410:intron 10.0%
!! ATAATAATAAAAAGATTTAG+TGG - chr2_2:29552244-29552263 Msa0247410:intron 10.0%
!! AAAATAATAAAAAGATTTAG+TGG - chr2_2:29552280-29552299 Msa0247410:intron 10.0%
!! CATATAAAATAATGTATTTA+AGG + chr2_2:29552790-29552809 None:intergenic 10.0%
!!! CTTAAATACATTATTTTATA+TGG - chr2_2:29552788-29552807 Msa0247410:intron 10.0%
!! AATTGATTATAAATAGGATT+AGG + chr2_2:29548843-29548862 None:intergenic 15.0%
!! GAGAAAAATTGATTATAAAT+AGG + chr2_2:29548849-29548868 None:intergenic 15.0%
!! AAAAAATTTCAGTTTATGAA+TGG - chr2_2:29549748-29549767 Msa0247410:intron 15.0%
!! GTAAAAATAAGCAATAATTT+AGG + chr2_2:29549890-29549909 None:intergenic 15.0%
!!! ATATAAACAGTTCTAAATTT+TGG + chr2_2:29549912-29549931 None:intergenic 15.0%
!! ATAATCAACACATTATATAA+AGG + chr2_2:29549944-29549963 None:intergenic 15.0%
!!! TAAGATTTTATGGTTTTTAA+GGG + chr2_2:29550236-29550255 None:intergenic 15.0%
!!! ATAAGATTTTATGGTTTTTA+AGG + chr2_2:29550237-29550256 None:intergenic 15.0%
!! AGGAATAAATTATTCATAAA+GGG + chr2_2:29550416-29550435 None:intergenic 15.0%
!! AAGGAATAAATTATTCATAA+AGG + chr2_2:29550417-29550436 None:intergenic 15.0%
!!! TATGAATAGTAAAATTTTTG+TGG - chr2_2:29551167-29551186 Msa0247410:intron 15.0%
!!! ATGAATAGTAAAATTTTTGT+GGG - chr2_2:29551168-29551187 Msa0247410:intron 15.0%
!!! GTTTTTAATTATTATTGGTT+AGG - chr2_2:29551285-29551304 Msa0247410:intron 15.0%
!! TAAAAACAAATTATCAACAA+AGG + chr2_2:29551415-29551434 None:intergenic 15.0%
!!! TGATAATTTGTTTTTAATTG+TGG - chr2_2:29551419-29551438 Msa0247410:intron 15.0%
!!! ATTTTGATAATCATAAAGAT+CGG + chr2_2:29551581-29551600 None:intergenic 15.0%
!! GAATAAATTACTGATATTAT+TGG - chr2_2:29551945-29551964 Msa0247410:intron 15.0%
!!! ATACAATTTTAATCAATGAA+AGG - chr2_2:29552330-29552349 Msa0247410:intron 15.0%
!!! TACAATTTTAATCAATGAAA+GGG - chr2_2:29552331-29552350 Msa0247410:intron 15.0%
!! TATCTTATATGTAATTCTAA+CGG - chr2_2:29553785-29553804 Msa0247410:intron 15.0%
!! AAAAAACAAAGAAATAACAT+CGG + chr2_2:29553867-29553886 None:intergenic 15.0%
!! TAATAGAAAGATATAAAGAA+AGG + chr2_2:29554348-29554367 None:intergenic 15.0%
!!! AAATTTTGGAAAAGTGAAAT+TGG - chr2_2:29549219-29549238 Msa0247410:intron 20.0%
!! AGAATAAAGAGATTAAAGAA+TGG + chr2_2:29549337-29549356 None:intergenic 20.0%
!! TTATGTTCTTGTATCTATTA+TGG - chr2_2:29549409-29549428 Msa0247410:intron 20.0%
!! TTGAAAATTTCAGATAAAGA+GGG - chr2_2:29549542-29549561 Msa0247410:intron 20.0%
!! AATAAGAAATCTGAATTGAA+TGG - chr2_2:29549671-29549690 Msa0247410:CDS 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG + chr2_2:29550099-29550118 None:intergenic 20.0%
!! GCAAAAATATATTATTGTAC+CGG - chr2_2:29550444-29550463 Msa0247410:intron 20.0%
!!! TTTAACAATTTTAGCAAAAC+CGG + chr2_2:29550466-29550485 None:intergenic 20.0%
!! TAACAAATAAATTGCTTCTA+TGG + chr2_2:29550496-29550515 None:intergenic 20.0%
!! ATTAAAAAGAAAAGTCTTTG+TGG + chr2_2:29551096-29551115 None:intergenic 20.0%
!!! CTTTTCTTTTTAATTGATTG+AGG - chr2_2:29551102-29551121 Msa0247410:intron 20.0%
!!! TGAATAGTAAAATTTTTGTG+GGG - chr2_2:29551169-29551188 Msa0247410:intron 20.0%
!! TAGTAAAAAAATTATCCACA+AGG + chr2_2:29551472-29551491 None:intergenic 20.0%
!! ATTAGATTCATAAATCTTGT+TGG - chr2_2:29551516-29551535 Msa0247410:intron 20.0%
!! CATGATATACTATAATTGAA+AGG + chr2_2:29551666-29551685 None:intergenic 20.0%
!! CTTTCAATTATAGTATATCA+TGG - chr2_2:29551664-29551683 Msa0247410:CDS 20.0%
!! ACAAATAAATAATGAAAGCT+TGG + chr2_2:29551740-29551759 None:intergenic 20.0%
!! GCTTTCATTATTTATTTGTT+TGG - chr2_2:29551741-29551760 Msa0247410:intron 20.0%
!! AATACCTTAAGATTAGTATA+AGG - chr2_2:29551910-29551929 Msa0247410:intron 20.0%
!! TTAACCTTATACTAATCTTA+AGG + chr2_2:29551917-29551936 None:intergenic 20.0%
!!! AAAAAATGACGATCATATTT+TGG - chr2_2:29552111-29552130 Msa0247410:intron 20.0%
!! CTATAATGTTGACAAATTAT+GGG + chr2_2:29552220-29552239 None:intergenic 20.0%
!! CATTCTTCATATATATAAGA+TGG - chr2_2:29552417-29552436 Msa0247410:intron 20.0%
!!! TGCATATTAGAGTATTTAAT+GGG + chr2_2:29552444-29552463 None:intergenic 20.0%
!!! TTGCATATTAGAGTATTTAA+TGG + chr2_2:29552445-29552464 None:intergenic 20.0%
!! TAAATACTCTAATATGCAAA+TGG - chr2_2:29552446-29552465 Msa0247410:intron 20.0%
!! ATATATACCATATTTACACA+TGG + chr2_2:29552472-29552491 None:intergenic 20.0%
!! CATTTAAAAATGTTACAAAG+TGG + chr2_2:29552570-29552589 None:intergenic 20.0%
!!! CACTTTGTAACATTTTTAAA+TGG - chr2_2:29552568-29552587 Msa0247410:intron 20.0%
!! ATATAATAATTAGAACACCA+AGG + chr2_2:29552639-29552658 None:intergenic 20.0%
!! TATAATTATGATGATTATGC+AGG - chr2_2:29552659-29552678 Msa0247410:intron 20.0%
!! TAGCAAAACCAAAATTTATA+TGG - chr2_2:29552689-29552708 Msa0247410:intron 20.0%
!! AGGTGTATAAATTAATTAAC+AGG + chr2_2:29552770-29552789 None:intergenic 20.0%
!!! TTTGTAAGTTGTTTTCATTA+TGG + chr2_2:29553570-29553589 None:intergenic 20.0%
!! ATTAAGATGATTATCGAAAT+AGG - chr2_2:29553596-29553615 Msa0247410:intron 20.0%
!! ATCTTATATGTAATTCTAAC+GGG - chr2_2:29553786-29553805 Msa0247410:intron 20.0%
!! AAAAACAAAGAAATAACATC+GGG + chr2_2:29553866-29553885 None:intergenic 20.0%
!! AGGTAAATCAAAATAAAAAC+CGG + chr2_2:29554328-29554347 None:intergenic 20.0%
!!! TTTATTTTCTTCATATGTCT+AGG + chr2_2:29555262-29555281 None:intergenic 20.0%
! AATAGGATTAGGAATAAGAA+TGG + chr2_2:29548832-29548851 None:intergenic 25.0%
!!! TTTTATTTCTTCTTGCATCT+GGG + chr2_2:29549044-29549063 None:intergenic 25.0%
!!! ATTTTATTTCTTCTTGCATC+TGG + chr2_2:29549045-29549064 None:intergenic 25.0%
!! ATTTTGTGTTATAGAGAAGA+GGG - chr2_2:29549101-29549120 Msa0247410:exon 25.0%
! TCTTGAAAAGAATAAGATTG+TGG - chr2_2:29549282-29549301 Msa0247410:CDS 25.0%
!!! AAGTTTGTATTGATTTGTGA+TGG - chr2_2:29549519-29549538 Msa0247410:intron 25.0%
! GTTGAAAATTTCAGATAAAG+AGG - chr2_2:29549541-29549560 Msa0247410:intron 25.0%
! TCGTATAATCTAACAACATT+TGG + chr2_2:29549597-29549616 None:intergenic 25.0%
! AAATGTTGTTAGATTATACG+AGG - chr2_2:29549596-29549615 Msa0247410:intron 25.0%
! ATTAATTCCAGATAATTGCA+GGG + chr2_2:29549654-29549673 None:intergenic 25.0%
! TATTAATTCCAGATAATTGC+AGG + chr2_2:29549655-29549674 None:intergenic 25.0%
! GATTTCCAGTATAAAATAAC+AGG - chr2_2:29549778-29549797 Msa0247410:intron 25.0%
!! TATTATTATATGTGTCGATG+TGG - chr2_2:29550133-29550152 Msa0247410:intron 25.0%
!! AGTAATCTTTTACACTTTAC+AGG - chr2_2:29550260-29550279 Msa0247410:CDS 25.0%
!! GAAGTACTTTATGTCTATTA+TGG - chr2_2:29550314-29550333 Msa0247410:CDS 25.0%
! TTTATGTCTATTATGGTAAG+AGG - chr2_2:29550321-29550340 Msa0247410:CDS 25.0%
! TTATGGTAAGAGGATTATTA+TGG - chr2_2:29550331-29550350 Msa0247410:CDS 25.0%
!! GCTGAAATTTGAAGATTTTA+AGG - chr2_2:29550353-29550372 Msa0247410:CDS 25.0%
! ATGAATAATTTATTCCTTCC+AGG - chr2_2:29550419-29550438 Msa0247410:intron 25.0%
! TGAATAATTTATTCCTTCCA+GGG - chr2_2:29550420-29550439 Msa0247410:intron 25.0%
!!! AATAATATATTTTTGCACCC+TGG + chr2_2:29550440-29550459 None:intergenic 25.0%
! AGAAGCAATAATTGTTTGAA+GGG + chr2_2:29550886-29550905 None:intergenic 25.0%
!! CTCATTCGTATTTTCATATT+CGG + chr2_2:29551001-29551020 None:intergenic 25.0%
! AATTGATTGAGGTATATTTG+TGG - chr2_2:29551113-29551132 Msa0247410:intron 25.0%
!! GTAATATATACTTTTCCTTG+TGG - chr2_2:29551454-29551473 Msa0247410:intron 25.0%
! ATTGGATCTAACATTGTATA+TGG - chr2_2:29551545-29551564 Msa0247410:intron 25.0%
! AAATAATGAAAGCTTGGAAT+GGG + chr2_2:29551734-29551753 None:intergenic 25.0%
! TAAATAATGAAAGCTTGGAA+TGG + chr2_2:29551735-29551754 None:intergenic 25.0%
! TTATTTATTTGTTTGGTCTG+TGG - chr2_2:29551748-29551767 Msa0247410:intron 25.0%
!!! TCATTTTTTTTTGTAGTGTC+CGG + chr2_2:29552100-29552119 None:intergenic 25.0%
! GCTATAATGTTGACAAATTA+TGG + chr2_2:29552221-29552240 None:intergenic 25.0%
! TGACATAATCTGATACAAAT+GGG + chr2_2:29552358-29552377 None:intergenic 25.0%
!! CTCAAGTACCATATAAATTT+TGG + chr2_2:29552700-29552719 None:intergenic 25.0%
!! ATGTCTTTAATTAGAAGTGT+TGG + chr2_2:29552897-29552916 None:intergenic 25.0%
! AGTCTTGAAAAATGGAATAA+TGG + chr2_2:29553081-29553100 None:intergenic 25.0%
! AAGAACATGTGTACAAATTA+AGG + chr2_2:29553134-29553153 None:intergenic 25.0%
! ATTAAACTGCAAACATTGTA+GGG + chr2_2:29553327-29553346 None:intergenic 25.0%
! AGTTATCTTTATGTTTCCTT+TGG + chr2_2:29553395-29553414 None:intergenic 25.0%
! ATATATCCAAACAGTCTTTA+TGG + chr2_2:29553477-29553496 None:intergenic 25.0%
!! AATGATGTAATTTGCCATTA+CGG + chr2_2:29553623-29553642 None:intergenic 25.0%
!! AATGGCAAATTACATCATTT+TGG - chr2_2:29553624-29553643 Msa0247410:intron 25.0%
! ATATGATCAAAGAAGATGAA+TGG - chr2_2:29554059-29554078 Msa0247410:intron 25.0%
! GGTAAATCAAAATAAAAACC+GGG + chr2_2:29554327-29554346 None:intergenic 25.0%
! TATAGAGTTCAGAAGAAAAA+TGG - chr2_2:29554748-29554767 Msa0247410:intron 25.0%
! GTTAATCGTAATTGAAAAAC+TGG - chr2_2:29554805-29554824 Msa0247410:intron 25.0%
! ATTTGATGTAGTTATGCAAA+AGG - chr2_2:29555183-29555202 Msa0247410:CDS 25.0%
! TTCACCAATTCAATTTCAAA+TGG + chr2_2:29555505-29555524 None:intergenic 25.0%
AGCAGATACAAACAAAACAA+AGG - chr2_2:29548736-29548755 Msa0247410:three_prime_UTR 30.0%
!! TCTTTGCTTTCTTTTGTTGT+AGG + chr2_2:29548765-29548784 None:intergenic 30.0%
! AAGAAAGCAAAGAAAAGTGT+TGG - chr2_2:29548772-29548791 Msa0247410:three_prime_UTR 30.0%
!! AGAAAGCAAAGAAAAGTGTT+GGG - chr2_2:29548773-29548792 Msa0247410:three_prime_UTR 30.0%
AGGAATAAGAATGGATCAAA+TGG + chr2_2:29548823-29548842 None:intergenic 30.0%
AAACGAATCGGCTATAAATA+AGG + chr2_2:29548902-29548921 None:intergenic 30.0%
!! AATGGTAATGGAAAACGAAT+CGG + chr2_2:29548914-29548933 None:intergenic 30.0%
GTAGTAATTGTGAGTTAAGA+GGG + chr2_2:29548969-29548988 None:intergenic 30.0%
TGTAGTAATTGTGAGTTAAG+AGG + chr2_2:29548970-29548989 None:intergenic 30.0%
TCTATGCAATGCTTGATTTA+TGG + chr2_2:29549013-29549032 None:intergenic 30.0%
! GATTTTGTGTTATAGAGAAG+AGG - chr2_2:29549100-29549119 Msa0247410:exon 30.0%
TGATCATAAATCAAGCAAGA+AGG - chr2_2:29549137-29549156 Msa0247410:CDS 30.0%
AAGGAAAAGTAGTGCAATTA+GGG - chr2_2:29549164-29549183 Msa0247410:intron 30.0%
CAATTAGGGAAATACGAATT+GGG - chr2_2:29549178-29549197 Msa0247410:intron 30.0%
TGATCTTAATAACACTGATC+AGG - chr2_2:29549303-29549322 Msa0247410:CDS 30.0%
! TTGTATCTATTATGGCTTGT+TGG - chr2_2:29549417-29549436 Msa0247410:intron 30.0%
!!! ATTATGGCTTGTTGGAATTT+TGG - chr2_2:29549425-29549444 Msa0247410:intron 30.0%
! GCTAATTTTACATCGATCTT+AGG - chr2_2:29549696-29549715 Msa0247410:CDS 30.0%
! ATTTTACATCGATCTTAGGT+TGG - chr2_2:29549700-29549719 Msa0247410:intron 30.0%
TTCCAGTATAAAATAACAGG+TGG - chr2_2:29549781-29549800 Msa0247410:intron 30.0%
!!! AACACAAAACCGTGTTTTTT+CGG + chr2_2:29549809-29549828 None:intergenic 30.0%
ATACATACACAAACACAACA+CGG - chr2_2:29550055-29550074 Msa0247410:intron 30.0%
TGAGAAAATCACATAATACG+AGG - chr2_2:29550108-29550127 Msa0247410:intron 30.0%
!! TTTTATGGTTTTTAAGGGTG+AGG + chr2_2:29550231-29550250 None:intergenic 30.0%
AATGTAAAAGTTGTCTTAGC+AGG - chr2_2:29550379-29550398 Msa0247410:CDS 30.0%
ATGTAAAAGTTGTCTTAGCA+GGG - chr2_2:29550380-29550399 Msa0247410:CDS 30.0%
! GATTTTCAGATTCCAGAAAT+AGG - chr2_2:29550568-29550587 Msa0247410:CDS 30.0%
! TTCACACATTTTCCTATTTC+TGG + chr2_2:29550583-29550602 None:intergenic 30.0%
AACTATTTGATCTGATCGAA+CGG - chr2_2:29550788-29550807 Msa0247410:intron 30.0%
! TTGGAGTGTTCACTATTAAT+GGG + chr2_2:29550850-29550869 None:intergenic 30.0%
GAGAAGCAATAATTGTTTGA+AGG + chr2_2:29550887-29550906 None:intergenic 30.0%
ATGAGTGTAGTATTAGACAT+AGG + chr2_2:29550909-29550928 None:intergenic 30.0%
AAGCACATGACATATACTTA+GGG + chr2_2:29550963-29550982 None:intergenic 30.0%
AAAGCACATGACATATACTT+AGG + chr2_2:29550964-29550983 None:intergenic 30.0%
TGGAAGAAATGAGTTAATTG+CGG + chr2_2:29551062-29551081 None:intergenic 30.0%
TCAAAACGGCACATTATTAT+GGG + chr2_2:29551140-29551159 None:intergenic 30.0%
ATTCATATCCCATCTCAAAA+CGG + chr2_2:29551154-29551173 None:intergenic 30.0%
ACTCGAAGGTTCAAAAATTA+TGG + chr2_2:29551241-29551260 None:intergenic 30.0%
ACTCTAAGCATAAAGTCTAA+AGG + chr2_2:29551267-29551286 None:intergenic 30.0%
! TTATCCACAACTAGTCTATA+AGG + chr2_2:29551382-29551401 None:intergenic 30.0%
!! AAATCTTGTTGGTTGATGAT+TGG - chr2_2:29551527-29551546 Msa0247410:intron 30.0%
! TGTATGTTTTCTTGTGAGAT+TGG - chr2_2:29551624-29551643 Msa0247410:CDS 30.0%
TAGTATAAGGTTAAACGTGA+AGG - chr2_2:29551923-29551942 Msa0247410:intron 30.0%
CATGATCGTCAATATCTATA+GGG + chr2_2:29552011-29552030 None:intergenic 30.0%
ACATGATCGTCAATATCTAT+AGG + chr2_2:29552012-29552031 None:intergenic 30.0%
!!! CATTTTTTTTTGTAGTGTCC+GGG + chr2_2:29552099-29552118 None:intergenic 30.0%
TAATGTTGACAAATTATGGG+TGG + chr2_2:29552217-29552236 None:intergenic 30.0%
CTTTGTGATACATTAGTTGA+TGG + chr2_2:29552310-29552329 None:intergenic 30.0%
GACATAATCTGATACAAATG+GGG + chr2_2:29552357-29552376 None:intergenic 30.0%
GTGACATAATCTGATACAAA+TGG + chr2_2:29552359-29552378 None:intergenic 30.0%
ATTAGATAAATGTTCGTGAG+TGG + chr2_2:29552381-29552400 None:intergenic 30.0%
TACTCACTGCTAATAAAAAG+TGG + chr2_2:29552824-29552843 None:intergenic 30.0%
ATTAAAGACATGACTAGTGT+TGG - chr2_2:29552906-29552925 Msa0247410:intron 30.0%
ATTAAGGATTGACACAAACA+AGG + chr2_2:29553118-29553137 None:intergenic 30.0%
AGCTTCAATAAGTTTACCTT+TGG + chr2_2:29553184-29553203 None:intergenic 30.0%
ATGTTCCAACAATTGATTGA+TGG - chr2_2:29553216-29553235 Msa0247410:intron 30.0%
GATTAAACTGCAAACATTGT+AGG + chr2_2:29553328-29553347 None:intergenic 30.0%
ATTTATCCGAGTTTATCTAC+TGG - chr2_2:29553495-29553514 Msa0247410:intron 30.0%
!! ACATGTTCATAAGTTGCTTT+TGG - chr2_2:29553537-29553556 Msa0247410:intron 30.0%
ATAAAGTGTGTGAAAATTCC+AGG - chr2_2:29553653-29553672 Msa0247410:intron 30.0%
TCAACAAAACTACACAACAT+AGG + chr2_2:29553895-29553914 None:intergenic 30.0%
CAAAGAAGATGAATGGTTTA+AGG - chr2_2:29554066-29554085 Msa0247410:intron 30.0%
TTATAATCCTGCAAATCTAG+AGG - chr2_2:29554093-29554112 Msa0247410:intron 30.0%
! TTCAAAAGTATACCACTTCA+TGG + chr2_2:29554174-29554193 None:intergenic 30.0%
ATCAATGCATTTCAGTTGAT+AGG - chr2_2:29554436-29554455 Msa0247410:intron 30.0%
! TCAATGCATTTCAGTTGATA+GGG - chr2_2:29554437-29554456 Msa0247410:intron 30.0%
GAACAATATACTTGAACTCT+AGG - chr2_2:29554636-29554655 Msa0247410:intron 30.0%
! ATCTTCTCAGTCAAATCTTT+TGG + chr2_2:29554703-29554722 None:intergenic 30.0%
!! ACTGAAATTTCAAGTTGTAG+TGG + chr2_2:29554846-29554865 None:intergenic 30.0%
! ATTTTCACTTCAATTGCAAC+AGG - chr2_2:29555010-29555029 Msa0247410:intron 30.0%
!! ACTCTTTTTGAGAAAATCTG+AGG - chr2_2:29555138-29555157 Msa0247410:CDS 30.0%
AAGGGGAAATTTACATTATC+TGG + chr2_2:29555292-29555311 None:intergenic 30.0%
!!! AATTTCCCCTTTTTGTTTTC+TGG - chr2_2:29555301-29555320 Msa0247410:five_prime_UTR 30.0%
TTAGCTATATTAGATGTCCT+AGG - chr2_2:29555328-29555347 Msa0247410:five_prime_UTR 30.0%
! TGATATCAGACACATCTTTT+TGG + chr2_2:29555470-29555489 None:intergenic 30.0%
! CATGCCATTTGAAATTGAAT+TGG - chr2_2:29555498-29555517 Msa0247410:five_prime_UTR 30.0%
AATCAAGCAAGAAGGATTGA+AGG - chr2_2:29549145-29549164 Msa0247410:CDS 35.0%
GAAGGAAAAGTAGTGCAATT+AGG - chr2_2:29549163-29549182 Msa0247410:intron 35.0%
GCAATTAGGGAAATACGAAT+TGG - chr2_2:29549177-29549196 Msa0247410:intron 35.0%
TACGAATTGGGAAAAACACT+TGG - chr2_2:29549190-29549209 Msa0247410:intron 35.0%
!! ACACTTGGTGAAGGAAATTT+TGG - chr2_2:29549205-29549224 Msa0247410:intron 35.0%
TGCATGGTAAGATGAATCAT+AGG + chr2_2:29549628-29549647 None:intergenic 35.0%
!!! TGCCACCTGTTATTTTATAC+TGG + chr2_2:29549786-29549805 None:intergenic 35.0%
AGGAAGAAAACAAACAACGT+GGG + chr2_2:29549835-29549854 None:intergenic 35.0%
! ATCAAAACAGTGTGTCATTG+AGG + chr2_2:29549855-29549874 None:intergenic 35.0%
TATTCGTGCTTCATAAGTGA+GGG + chr2_2:29550038-29550057 None:intergenic 35.0%
! ATCTTTTACACTTTACAGGC+TGG - chr2_2:29550264-29550283 Msa0247410:CDS 35.0%
!! ATATATTTTTGCACCCTGGA+AGG + chr2_2:29550436-29550455 None:intergenic 35.0%
AGTGTGACATTGTCTAACAA+GGG + chr2_2:29550619-29550638 None:intergenic 35.0%
AACGGACACTAAATTTATGG+AGG + chr2_2:29550669-29550688 None:intergenic 35.0%
CCAAACGGACACTAAATTTA+TGG + chr2_2:29550672-29550691 None:intergenic 35.0%
CCATAAATTTAGTGTCCGTT+TGG - chr2_2:29550669-29550688 Msa0247410:CDS 35.0%
! CTTGGAGTGTTCACTATTAA+TGG + chr2_2:29550851-29550870 None:intergenic 35.0%
AGCAATAATTGTTTGAAGGG+TGG + chr2_2:29550883-29550902 None:intergenic 35.0%
GTCTAATACTACACTCATCA+TGG - chr2_2:29550911-29550930 Msa0247410:intron 35.0%
ACATATACTTAGGGGCAAAT+GGG + chr2_2:29550954-29550973 None:intergenic 35.0%
AGCACATGACATATACTTAG+GGG + chr2_2:29550962-29550981 None:intergenic 35.0%
AAATGAGTTAATTGCGGTGT+TGG + chr2_2:29551056-29551075 None:intergenic 35.0%
TCTTTGTGGCAGTAACAATA+TGG + chr2_2:29551082-29551101 None:intergenic 35.0%
CTCAAAACGGCACATTATTA+TGG + chr2_2:29551141-29551160 None:intergenic 35.0%
!!! AATAATGTGCCGTTTTGAGA+TGG - chr2_2:29551142-29551161 Msa0247410:intron 35.0%
!!! ATAATGTGCCGTTTTGAGAT+GGG - chr2_2:29551143-29551162 Msa0247410:intron 35.0%
! TTTGTGGGGATGCTAATTTT+TGG - chr2_2:29551183-29551202 Msa0247410:intron 35.0%
GTTATCTACCAAAACACGTT+AGG - chr2_2:29551212-29551231 Msa0247410:intron 35.0%
! TATGGATTCCTAACGTGTTT+TGG + chr2_2:29551223-29551242 None:intergenic 35.0%
TAATTGAAAGCCTACACAGT+TGG - chr2_2:29551342-29551361 Msa0247410:intron 35.0%
! CATACCTTATAGACTAGTTG+TGG - chr2_2:29551375-29551394 Msa0247410:intron 35.0%
ATCTACATGCCATATGTATG+TGG + chr2_2:29551782-29551801 None:intergenic 35.0%
TTAAAATAGCAGCAGTTACG+TGG + chr2_2:29551892-29551911 None:intergenic 35.0%
CTGATATTATTGGTCCATGT+TGG - chr2_2:29551955-29551974 Msa0247410:intron 35.0%
ATATTATTGGTCCATGTTGG+TGG - chr2_2:29551958-29551977 Msa0247410:intron 35.0%
CATAATATATGCAAAGTCCG+TGG - chr2_2:29552066-29552085 Msa0247410:intron 35.0%
CAAATGGCCATGTGTAAATA+TGG - chr2_2:29552462-29552481 Msa0247410:intron 35.0%
TATGATGATTATGCAGGTCT+TGG - chr2_2:29552665-29552684 Msa0247410:intron 35.0%
ATATGTGTTTGTGTCCAACA+CGG - chr2_2:29552929-29552948 Msa0247410:intron 35.0%
TGTAATCATATATGCCGTGT+TGG + chr2_2:29552946-29552965 None:intergenic 35.0%
CACTGACAAGTCTTGAAAAA+TGG + chr2_2:29553089-29553108 None:intergenic 35.0%
ATTTCTTGACAGTCATCCAA+AGG - chr2_2:29553165-29553184 Msa0247410:intron 35.0%
GGTAAACTTATTGAAGCTCA+TGG - chr2_2:29553186-29553205 Msa0247410:intron 35.0%
AACTTATTGAAGCTCATGGT+AGG - chr2_2:29553190-29553209 Msa0247410:intron 35.0%
TATCCTTACCCTACAATGTT+GGG + chr2_2:29553440-29553459 None:intergenic 35.0%
TTATCCTTACCCTACAATGT+TGG + chr2_2:29553441-29553460 None:intergenic 35.0%
TTCGAACCATAAAGACTGTT+TGG - chr2_2:29553468-29553487 Msa0247410:intron 35.0%
CATAAGCCAGTAGATAAACT+CGG + chr2_2:29553504-29553523 None:intergenic 35.0%
TTATCGAAATAGGACCGTAA+TGG - chr2_2:29553606-29553625 Msa0247410:intron 35.0%
AACATAATTTGGACTTCCAC+AGG + chr2_2:29553700-29553719 None:intergenic 35.0%
ATCTCAGGAGCAACATAATT+TGG + chr2_2:29553711-29553730 None:intergenic 35.0%
AAATCGGATATTTGGTCATG+CGG - chr2_2:29553759-29553778 Msa0247410:intron 35.0%
GCAAGATTTCTGTCATCAAA+AGG + chr2_2:29553819-29553838 None:intergenic 35.0%
TCTTGCAGTTCTCTATCAAA+AGG - chr2_2:29553833-29553852 Msa0247410:intron 35.0%
CGAGGTAAAAACACATCAAT+TGG + chr2_2:29553925-29553944 None:intergenic 35.0%
!! TTGATGTGTTTTTACCTCGA+CGG - chr2_2:29553926-29553945 Msa0247410:intron 35.0%
! TTTACAATGTTTTGTGCACC+AGG + chr2_2:29553998-29554017 None:intergenic 35.0%
TGATCATATCCATCGTTACT+CGG + chr2_2:29554048-29554067 None:intergenic 35.0%
AGAAGATGAATGGTTTAAGG+AGG - chr2_2:29554069-29554088 Msa0247410:intron 35.0%
GAAGATGAATGGTTTAAGGA+GGG - chr2_2:29554070-29554089 Msa0247410:intron 35.0%
AAAGTATACCACTTCATGGA+TGG + chr2_2:29554170-29554189 None:intergenic 35.0%
ACTATGCAACAGTGATATAG+CGG + chr2_2:29554248-29554267 None:intergenic 35.0%
CAGTTGTCAACTGCATATAA+CGG + chr2_2:29554285-29554304 None:intergenic 35.0%
! TGTCGTCTATAATTTTGTCC+CGG - chr2_2:29554306-29554325 Msa0247410:intron 35.0%
!!! TTGATAAGTGCTGGTGATTT+TGG + chr2_2:29554421-29554440 None:intergenic 35.0%
! TGAAATGCATTGATAAGTGC+TGG + chr2_2:29554430-29554449 None:intergenic 35.0%
CACCTCTTGTTCAAAAAATC+CGG + chr2_2:29554485-29554504 None:intergenic 35.0%
TGAAAGTTTATACCGTCACT+TGG - chr2_2:29554517-29554536 Msa0247410:intron 35.0%
! ACATGTATTTTGCCAAGTGA+CGG + chr2_2:29554532-29554551 None:intergenic 35.0%
! CAGTCAAATCTTTTGGTGAA+TGG + chr2_2:29554696-29554715 None:intergenic 35.0%
GAGGACATTGTAATCGAAAT+GGG - chr2_2:29554724-29554743 Msa0247410:intron 35.0%
TCAGTTGAAAGTGATACAAG+AGG - chr2_2:29554861-29554880 Msa0247410:intron 35.0%
GATAAAGCTCATAAAAGCCT+AGG - chr2_2:29554883-29554902 Msa0247410:intron 35.0%
AGTTCCACTACATACAAAGA+TGG + chr2_2:29555050-29555069 None:intergenic 35.0%
! CTTTGTATGTAGTGGAACTA+AGG - chr2_2:29555051-29555070 Msa0247410:CDS 35.0%
AAAAGGTTATCGAACGACTT+GGG - chr2_2:29555200-29555219 Msa0247410:CDS 35.0%
AACCCACCAGAAAACAAAAA+GGG + chr2_2:29555310-29555329 None:intergenic 35.0%
TAACCCACCAGAAAACAAAA+AGG + chr2_2:29555311-29555330 None:intergenic 35.0%
!! AGCAAAGAAAAGTGTTGGGT+TGG - chr2_2:29548777-29548796 Msa0247410:three_prime_UTR 40.0%
!! GCAAAGAAAAGTGTTGGGTT+GGG - chr2_2:29548778-29548797 Msa0247410:three_prime_UTR 40.0%
AGAAACAGGTGGAATGGTAA+TGG + chr2_2:29548926-29548945 None:intergenic 40.0%
CAACTAAGAAACAGGTGGAA+TGG + chr2_2:29548932-29548951 None:intergenic 40.0%
CAAGTGTGCAACTAAGAAAC+AGG + chr2_2:29548940-29548959 None:intergenic 40.0%
TTATAGAGAAGAGGGTCGTT+GGG - chr2_2:29549109-29549128 Msa0247410:CDS 40.0%
! TTGGGAAAAACACTTGGTGA+AGG - chr2_2:29549196-29549215 Msa0247410:intron 40.0%
! TTGGCTAGAGATACTGATTG+TGG - chr2_2:29549238-29549257 Msa0247410:intron 40.0%
!! TACATCGATCTTAGGTTGGT+CGG - chr2_2:29549704-29549723 Msa0247410:intron 40.0%
GAGGAAGAAAACAAACAACG+TGG + chr2_2:29549836-29549855 None:intergenic 40.0%
GTATTCGTGCTTCATAAGTG+AGG + chr2_2:29550039-29550058 None:intergenic 40.0%
CAAACACAACACGGATACTA+CGG - chr2_2:29550064-29550083 Msa0247410:intron 40.0%
GAGTGTGACATTGTCTAACA+AGG + chr2_2:29550620-29550639 None:intergenic 40.0%
GGACACTAAATTTATGGAGG+AGG + chr2_2:29550666-29550685 None:intergenic 40.0%
AACAACCGATCTTGACCAAA+CGG + chr2_2:29550687-29550706 None:intergenic 40.0%
CAAGATCGTTCAAGATCAGT+CGG - chr2_2:29550707-29550726 Msa0247410:intron 40.0%
TCAAGTAGGTTAGGTTACGT+GGG + chr2_2:29550817-29550836 None:intergenic 40.0%
TTCAAGTAGGTTAGGTTACG+TGG + chr2_2:29550818-29550837 None:intergenic 40.0%
TGTTCACTATTAATGGGAGC+TGG + chr2_2:29550844-29550863 None:intergenic 40.0%
GACATATACTTAGGGGCAAA+TGG + chr2_2:29550955-29550974 None:intergenic 40.0%
! AAGTCTAAAGGTGTACTCGA+AGG + chr2_2:29551255-29551274 None:intergenic 40.0%
TATTTGTTTGGTCTGTGGTG+TGG - chr2_2:29551753-29551772 Msa0247410:intron 40.0%
ATTTGTTTGGTCTGTGGTGT+GGG - chr2_2:29551754-29551773 Msa0247410:intron 40.0%
ATCAACAAATGCCACCAACA+TGG + chr2_2:29551972-29551991 None:intergenic 40.0%
GCTCTTATCCTATGTATACG+TGG - chr2_2:29552504-29552523 Msa0247410:intron 40.0%
TACACATGCCACGTATACAT+AGG + chr2_2:29552515-29552534 None:intergenic 40.0%
TTAGAACACCAAGGCTTCAA+AGG + chr2_2:29552630-29552649 None:intergenic 40.0%
ATGGTACTTGAGTACGTGAA+TGG - chr2_2:29552708-29552727 Msa0247410:intron 40.0%
TCAGACATTGACACATGTGT+CGG + chr2_2:29552857-29552876 None:intergenic 40.0%
!! ATTAGAAGTGTTGGTGCTAC+AGG + chr2_2:29552888-29552907 None:intergenic 40.0%
GCTATTGACACTAACATCGA+TGG + chr2_2:29552995-29553014 None:intergenic 40.0%
TAGATGTGTCAGTGTTGTGT+CGG + chr2_2:29553050-29553069 None:intergenic 40.0%
TCACGCCATCAATCAATTGT+TGG + chr2_2:29553224-29553243 None:intergenic 40.0%
GTGAGTTACTGCCACAATAA+AGG - chr2_2:29553240-29553259 Msa0247410:intron 40.0%
TGTGGAAGACACCTTTATTG+TGG + chr2_2:29553254-29553273 None:intergenic 40.0%
!! ACAATAAAGGTGTCTTCCAC+AGG - chr2_2:29553253-29553272 Msa0247410:intron 40.0%
!! CAATAAAGGTGTCTTCCACA+GGG - chr2_2:29553254-29553273 Msa0247410:intron 40.0%
AAAGAACCTTAAGATCCCTG+TGG + chr2_2:29553272-29553291 None:intergenic 40.0%
AATGTACTTGTCGATGCCAA+AGG - chr2_2:29553376-29553395 Msa0247410:intron 40.0%
ATCCTTACCCTACAATGTTG+GGG + chr2_2:29553439-29553458 None:intergenic 40.0%
TGTGAAAATTCCAGGCAGAT+GGG - chr2_2:29553661-29553680 Msa0247410:intron 40.0%
TAAAAATCTACGATCCGTCG+AGG + chr2_2:29553943-29553962 None:intergenic 40.0%
CAGATGTTCAGATACCAAGA+TGG - chr2_2:29553966-29553985 Msa0247410:intron 40.0%
!!! GTTACTCGGGTTTTAGGATT+GGG + chr2_2:29554034-29554053 None:intergenic 40.0%
GATCATATCCATCGTTACTC+GGG + chr2_2:29554047-29554066 None:intergenic 40.0%
!! AGCTTTTTCCATCCATGAAG+TGG - chr2_2:29554159-29554178 Msa0247410:intron 40.0%
GCTATATCACTGTTGCATAG+TGG - chr2_2:29554247-29554266 Msa0247410:intron 40.0%
CTTGTTCAAAAAATCCGGAG+AGG + chr2_2:29554480-29554499 None:intergenic 40.0%
!!! CTCCGGATTTTTTGAACAAG+AGG - chr2_2:29554480-29554499 Msa0247410:intron 40.0%
!! ACTTGAACTCTAGGATGTCT+CGG - chr2_2:29554645-29554664 Msa0247410:intron 40.0%
AGATTTGACTGAGAAGATCG+AGG - chr2_2:29554705-29554724 Msa0247410:intron 40.0%
CGAGGACATTGTAATCGAAA+TGG - chr2_2:29554723-29554742 Msa0247410:intron 40.0%
! TTGCAACAGGTGTTTGAAGT+TGG - chr2_2:29555023-29555042 Msa0247410:intron 40.0%
TGGTCCATCTTTGTATGTAG+TGG - chr2_2:29555043-29555062 Msa0247410:intron 40.0%
GTGGAACTAAGGAAGTCTTA+TGG - chr2_2:29555062-29555081 Msa0247410:CDS 40.0%
CAAAAGGTTATCGAACGACT+TGG - chr2_2:29555199-29555218 Msa0247410:CDS 40.0%
!!! TTCCCCTTTTTGTTTTCTGG+TGG - chr2_2:29555304-29555323 Msa0247410:five_prime_UTR 40.0%
!!! TCCCCTTTTTGTTTTCTGGT+GGG - chr2_2:29555305-29555324 Msa0247410:five_prime_UTR 40.0%
ACCCACCAGAAAACAAAAAG+GGG + chr2_2:29555309-29555328 None:intergenic 40.0%
TCCAGCCATTGAAACTCTTT+AGG - chr2_2:29555357-29555376 Msa0247410:five_prime_UTR 40.0%
CCAGCCATTGAAACTCTTTA+GGG - chr2_2:29555358-29555377 Msa0247410:five_prime_UTR 40.0%
CACTCCCTAAAGAGTTTCAA+TGG + chr2_2:29555365-29555384 None:intergenic 40.0%
!! GAGTGATTTGCTTCCTACTA+TGG - chr2_2:29555380-29555399 Msa0247410:five_prime_UTR 40.0%
AGTCTAATTCCTAGAGCCAT+AGG + chr2_2:29555407-29555426 None:intergenic 40.0%
! TTAGTCTTTGCAGTTACGTG+CGG - chr2_2:29555427-29555446 Msa0247410:five_prime_UTR 40.0%
GTGTGCAACTAAGAAACAGG+TGG + chr2_2:29548937-29548956 None:intergenic 45.0%
GTTATAGAGAAGAGGGTCGT+TGG - chr2_2:29549108-29549127 Msa0247410:CDS 45.0%
GATAATTGCAGGGACATGCA+TGG + chr2_2:29549644-29549663 None:intergenic 45.0%
TGCATGTCCCTGCAATTATC+TGG - chr2_2:29549644-29549663 Msa0247410:CDS 45.0%
GATTAAACGCATCCTGGTGT+CGG + chr2_2:29550183-29550202 None:intergenic 45.0%
TCTTCGGATTAAACGCATCC+TGG + chr2_2:29550189-29550208 None:intergenic 45.0%
! GCGTTTAATCCGAAGAGTGT+CGG - chr2_2:29550193-29550212 Msa0247410:intron 45.0%
!! TATGAAGCACCGACACTCTT+CGG + chr2_2:29550205-29550224 None:intergenic 45.0%
AGTGTCCGTTTGGTCAAGAT+CGG - chr2_2:29550679-29550698 Msa0247410:CDS 45.0%
! GCTGGACTTTCAAGTAGGTT+AGG + chr2_2:29550826-29550845 None:intergenic 45.0%
AGTGAACACTCCAAGCATCT+AGG - chr2_2:29550856-29550875 Msa0247410:intron 45.0%
ACTAGATGTGCCAACTGTGT+AGG + chr2_2:29551355-29551374 None:intergenic 45.0%
ATACGTGGCATGTGTAGCTT+AGG - chr2_2:29552519-29552538 Msa0247410:intron 45.0%
! AAGGCAAGTTGGACTTGCAT+TGG + chr2_2:29552611-29552630 None:intergenic 45.0%
TGTCTTCCACAGGGATCTTA+AGG - chr2_2:29553263-29553282 Msa0247410:intron 45.0%
TGCTTTGCCCCAACATTGTA+GGG - chr2_2:29553429-29553448 Msa0247410:intron 45.0%
GTGTGAAAATTCCAGGCAGA+TGG - chr2_2:29553660-29553679 Msa0247410:intron 45.0%
CCTCTATTGGCAAGAATCTC+AGG + chr2_2:29553726-29553745 None:intergenic 45.0%
CCTGAGATTCTTGCCAATAG+AGG - chr2_2:29553723-29553742 Msa0247410:intron 45.0%
CTTGCCAATAGAGGCTATGA+TGG - chr2_2:29553732-29553751 Msa0247410:intron 45.0%
ATGGCGCGAAATCGGATATT+TGG - chr2_2:29553751-29553770 Msa0247410:intron 45.0%
!!! CGTTACTCGGGTTTTAGGAT+TGG + chr2_2:29554035-29554054 None:intergenic 45.0%
TCCTAAAACCCGAGTAACGA+TGG - chr2_2:29554036-29554055 Msa0247410:intron 45.0%
! TCCATCGTTACTCGGGTTTT+AGG + chr2_2:29554040-29554059 None:intergenic 45.0%
TCCTGCAAATCTAGAGGATG+AGG - chr2_2:29554099-29554118 Msa0247410:intron 45.0%
TCCTCATCCTCTAGATTTGC+AGG + chr2_2:29554103-29554122 None:intergenic 45.0%
AGAGGATGAGGAAGAAGAAG+AGG - chr2_2:29554111-29554130 Msa0247410:intron 45.0%
TGAGGAAGAAGAAGAGGAAG+AGG - chr2_2:29554117-29554136 Msa0247410:intron 45.0%
TATTCGTTACAGCCCCTTGA+AGG - chr2_2:29554385-29554404 Msa0247410:intron 45.0%
TCTTCATGCTTAGACCTCTC+CGG - chr2_2:29554463-29554482 Msa0247410:intron 45.0%
TAAAAGCCTAGGTAGCCTCT+CGG - chr2_2:29554894-29554913 Msa0247410:intron 45.0%
CAATGGCTGGATTCAAACCT+AGG + chr2_2:29555348-29555367 None:intergenic 45.0%
CCCTAAAGAGTTTCAATGGC+TGG + chr2_2:29555361-29555380 None:intergenic 45.0%
TGCTTCCTACTATGGTCCTA+TGG - chr2_2:29555388-29555407 Msa0247410:five_prime_UTR 45.0%
TAGAGCCATAGGACCATAGT+AGG + chr2_2:29555396-29555415 None:intergenic 45.0%
TACTATGGTCCTATGGCTCT+AGG - chr2_2:29555395-29555414 Msa0247410:five_prime_UTR 45.0%
! CAGGTGGCACCGAAAAAACA+CGG - chr2_2:29549797-29549816 Msa0247410:intron 50.0%
AGTAGGTTAGGTTACGTGGG+TGG + chr2_2:29550814-29550833 None:intergenic 50.0%
! TGGGAGCTGGACTTTCAAGT+AGG + chr2_2:29550831-29550850 None:intergenic 50.0%
GTGTGGGCTCCACATACATA+TGG - chr2_2:29551770-29551789 Msa0247410:intron 50.0%
! CGAGCTTAGCTCAGTTGGTA+AGG - chr2_2:29552037-29552056 Msa0247410:intron 50.0%
AAAGTCCGTGGTTCGAATCC+CGG - chr2_2:29552078-29552097 Msa0247410:intron 50.0%
CCAAGGCTTCAAAGGCAAGT+TGG + chr2_2:29552622-29552641 None:intergenic 50.0%
!! CCAACTTGCCTTTGAAGCCT+TGG - chr2_2:29552619-29552638 Msa0247410:intron 50.0%
AGCGTGTCTTGTGTCTGTGT+TGG - chr2_2:29553012-29553031 Msa0247410:intron 50.0%
!! AATGTTGGGGCAAAGCACTG+AGG + chr2_2:29553426-29553445 None:intergenic 50.0%
GTGCTTTGCCCCAACATTGT+AGG - chr2_2:29553428-29553447 Msa0247410:intron 50.0%
TGCCCCAACATTGTAGGGTA+AGG - chr2_2:29553434-29553453 Msa0247410:intron 50.0%
! AGGCTATGATGGCGCGAAAT+CGG - chr2_2:29553743-29553762 Msa0247410:intron 50.0%
ATACCAAGATGGCTGTCACC+TGG - chr2_2:29553977-29553996 Msa0247410:intron 50.0%
TGGACTCTGGTCTCCTTCAA+GGG + chr2_2:29554401-29554420 None:intergenic 50.0%
TTGGACTCTGGTCTCCTTCA+AGG + chr2_2:29554402-29554421 None:intergenic 50.0%
!! GTGCTGGTGATTTTGGACTC+TGG + chr2_2:29554414-29554433 None:intergenic 50.0%
!! AACTCTAGGATGTCTCGGAG+AGG - chr2_2:29554650-29554669 Msa0247410:intron 50.0%
GAGAAGAGGGTCGTTGGGAA+TGG - chr2_2:29549114-29549133 Msa0247410:CDS 55.0%
GAAGGGTGGACCTAGATGCT+TGG + chr2_2:29550869-29550888 None:intergenic 55.0%
CCAACTGAGCTAAGCTCGCA+AGG + chr2_2:29552035-29552054 None:intergenic 55.0%
CCTTGCGAGCTTAGCTCAGT+TGG - chr2_2:29552032-29552051 Msa0247410:intron 55.0%
AGTGTCCGGGATTCGAACCA+CGG + chr2_2:29552086-29552105 None:intergenic 55.0%
TATGCAGCAACCCATCTGCC+TGG + chr2_2:29553674-29553693 None:intergenic 55.0%
GGGTTGCTGCATACAACCTG+TGG - chr2_2:29553681-29553700 Msa0247410:intron 55.0%
CGCGCCATCATAGCCTCTAT+TGG + chr2_2:29553739-29553758 None:intergenic 55.0%
GGACTCTGGTCTCCTTCAAG+GGG + chr2_2:29554400-29554419 None:intergenic 55.0%
! GAACGACTTGGGTATAGCCG+AGG - chr2_2:29555211-29555230 Msa0247410:CDS 55.0%
GTCTTTGCAGTTACGTGCGG+AGG - chr2_2:29555430-29555449 Msa0247410:five_prime_UTR 55.0%
CACGACATGAGTCCGACACC+AGG - chr2_2:29550168-29550187 Msa0247410:intron 60.0%
GCACCAGGTGACAGCCATCT+TGG + chr2_2:29553983-29554002 None:intergenic 60.0%
AAGCCTAGGTAGCCTCTCGG+TGG - chr2_2:29554897-29554916 Msa0247410:intron 60.0%
TTACCTCTGCTGCCACCGAG+AGG + chr2_2:29554912-29554931 None:intergenic 60.0%
! CGACTTGGGTATAGCCGAGG+CGG - chr2_2:29555214-29555233 Msa0247410:CDS 60.0%
CTGCCACCGAGAGGCTACCT+AGG + chr2_2:29554903-29554922 None:intergenic 65.0%
TAGCCTCTCGGTGGCAGCAG+AGG - chr2_2:29554906-29554925 Msa0247410:intron 65.0%
TTGGGTATAGCCGAGGCGGC+AGG - chr2_2:29555218-29555237 Msa0247410:CDS 65.0%
TGGGTATAGCCGAGGCGGCA+GGG - chr2_2:29555219-29555238 Msa0247410:CDS 65.0%
GCTTACTAGCCCTGCCGCCT+CGG + chr2_2:29555231-29555250 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 29548732 29555642 29548732 ID=Msa0247410;Name=Msa0247410
chr2_2 mRNA 29548732 29555642 29548732 ID=Msa0247410-mRNA-1;Parent=Msa0247410;Name=Msa0247410-mRNA-1;_AED=0.20;_eAED=0.20;_QI=401|0.88|1|1|1|1|10|371|389
chr2_2 exon 29548732 29549180 29548732 ID=Msa0247410-mRNA-1:exon:10505;Parent=Msa0247410-mRNA-1
chr2_2 exon 29549268 29549342 29549268 ID=Msa0247410-mRNA-1:exon:10504;Parent=Msa0247410-mRNA-1
chr2_2 exon 29549447 29549509 29549447 ID=Msa0247410-mRNA-1:exon:10503;Parent=Msa0247410-mRNA-1
chr2_2 exon 29549600 29549716 29549600 ID=Msa0247410-mRNA-1:exon:10502;Parent=Msa0247410-mRNA-1
chr2_2 exon 29549873 29549977 29549873 ID=Msa0247410-mRNA-1:exon:10501;Parent=Msa0247410-mRNA-1
chr2_2 exon 29550194 29550418 29550194 ID=Msa0247410-mRNA-1:exon:10500;Parent=Msa0247410-mRNA-1
chr2_2 exon 29550520 29550699 29550520 ID=Msa0247410-mRNA-1:exon:10499;Parent=Msa0247410-mRNA-1
chr2_2 exon 29551622 29551693 29551622 ID=Msa0247410-mRNA-1:exon:10498;Parent=Msa0247410-mRNA-1
chr2_2 exon 29554757 29554819 29554757 ID=Msa0247410-mRNA-1:exon:10497;Parent=Msa0247410-mRNA-1
chr2_2 exon 29555050 29555642 29555050 ID=Msa0247410-mRNA-1:exon:10496;Parent=Msa0247410-mRNA-1
chr2_2 five_prime_UTR 29555242 29555642 29555242 ID=Msa0247410-mRNA-1:five_prime_utr;Parent=Msa0247410-mRNA-1
chr2_2 CDS 29555050 29555241 29555050 ID=Msa0247410-mRNA-1:cds;Parent=Msa0247410-mRNA-1
chr2_2 CDS 29554757 29554819 29554757 ID=Msa0247410-mRNA-1:cds;Parent=Msa0247410-mRNA-1
chr2_2 CDS 29551622 29551693 29551622 ID=Msa0247410-mRNA-1:cds;Parent=Msa0247410-mRNA-1
chr2_2 CDS 29550520 29550699 29550520 ID=Msa0247410-mRNA-1:cds;Parent=Msa0247410-mRNA-1
chr2_2 CDS 29550194 29550418 29550194 ID=Msa0247410-mRNA-1:cds;Parent=Msa0247410-mRNA-1
chr2_2 CDS 29549873 29549977 29549873 ID=Msa0247410-mRNA-1:cds;Parent=Msa0247410-mRNA-1
chr2_2 CDS 29549600 29549716 29549600 ID=Msa0247410-mRNA-1:cds;Parent=Msa0247410-mRNA-1
chr2_2 CDS 29549447 29549509 29549447 ID=Msa0247410-mRNA-1:cds;Parent=Msa0247410-mRNA-1
chr2_2 CDS 29549268 29549342 29549268 ID=Msa0247410-mRNA-1:cds;Parent=Msa0247410-mRNA-1
chr2_2 CDS 29549103 29549180 29549103 ID=Msa0247410-mRNA-1:cds;Parent=Msa0247410-mRNA-1
chr2_2 three_prime_UTR 29548732 29549102 29548732 ID=Msa0247410-mRNA-1:three_prime_utr;Parent=Msa0247410-mRNA-1
Gene Sequence

>Msa0247410

ATGGTGATCATAAATCAAGCAAGAAGGATTGAAGGAAAAGTAGTGCAATTAGGGAAATACGAATTGGGAAAAACACTTGGTGAAGGAAATTTTGGAAAAGTGAAATTGGCTAGAGATACTGATTGTGGAAATTATTTTGCTGTTAAGATTCTTGAAAAGAATAAGATTGTTGATCTTAATAACACTGATCAGATAAAGAGGGAGATATCAACTTTGAAGCTTCTGAAACATCCAAATGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTACTTGAGTACGTGAATGGAGGAGAGTTATTTGACAAAATTGCAGATGGGTTGCTGCATACAACCTGTGGAAGTCCAAATTATGTTGCTCCTGAGATTCTTGCCAATAGAGGCTATGATGGCGCGAAATCGGATATTTGGTCATGCGGTGTTATCTTATATGTAATTCTAACGGGATATCTTCCTTTTGATGACAGAAATCTTGCAGTTCTCTATCAAAAGATTTTTAAAGCAGATGTTCAGATACCAAGATGGCTGTCACCTGGTGCACAAAACATTGTAAAGAAAATTCTTGATCCCAATCCTAAAACCCGAGTAACGATGGATATGATCAAAGAAGATGAATGGTTTAAGGAGGGTTATAATCCTGCAAATCTAGAGGATGAGGAAGAAGAAGAGGAAGAGGATGTATACACTGACGATGAAGCTTTTTCCATCCATGAAGTGCCCCTTGAAGGAGACCAGAGTCCAAAATCACCAGCACTTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCTTAGACCTCTCCGGATTTTTTGAACAAGAGGATGTCTCGGAGAGGAAGATAAGATTTACGTCAAACCATTCACCAAAAGATTTGACTGAGAAGATCGAGGACATTGTAATCGAAATGGGATATAGAGTTCAGAAGAAAAATGGAAAATTGAAAGTGATACAAGAGGATAAAGCTCATAAAAGCCTAGGTAGCCTCTCGGTGGCAGCAGAGGTGTTTGAAGTTGGTCCATCTTTGTATGTAGTGGAACTAAGGAAGTCTTATGGAGATGCTTCTGTATATAGACAATTATGCAAAAGGTTATCGAACGACTTGGGTATAGCCGAGGCGGCAGGGCTAGTAAGCTCAGAAAGCCTAGACATATGA
Protein sequence

>Msa0247410

MVIINQARRIEGKVVQLGKYELGKTLGEGNFGKVKLARDTDCGNYFAVKILEKNKIVDLNNTDQIKREISTLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKIADGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGAQNIVKKILDPNPKTRVTMDMIKEDEWFKEGYNPANLEDEEEEEEEDVYTDDEAFSIHEVPLEGDQSPKSPALINAFQLIGMSSCLDLSGFFEQEDVSERKIRFTSNHSPKDLTEKIEDIVIEMGYRVQKKNGKLKVIQEDKAHKSLGSLSVAAEVFEVGPSLYVVELRKSYGDASVYRQLCKRLSNDLGIAEAAGLVSSESLDI*