AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0248420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0248420 MtrunA17_Chr2g0303541 99.227 647 5 0 1 647 1 647 0.0 1324
Msa0248420 MtrunA17_Chr2g0285511 54.631 637 256 10 1 634 1 607 0.0 676
Msa0248420 MtrunA17_Chr1g0181181 52.531 573 235 7 1 570 1 539 0.0 600
Msa0248420 MtrunA17_Chr1g0199631 53.131 559 234 11 44 597 8 543 0.0 576
Msa0248420 MtrunA17_Chr2g0320691 45.412 643 322 12 9 636 6 634 0.0 569
Msa0248420 MtrunA17_Chr8g0374011 46.526 662 289 14 8 617 2 650 0.0 560
Msa0248420 MtrunA17_Chr4g0050021 41.786 627 321 10 1 593 19 635 1.28e-156 466
Msa0248420 MtrunA17_Chr2g0279481 37.838 666 365 11 5 631 23 678 2.94e-149 448
Msa0248420 MtrunA17_Chr5g0401341 42.537 536 271 11 1 527 1 508 2.75e-128 392
Msa0248420 MtrunA17_Chr4g0010091 39.049 589 305 9 15 584 23 576 3.26e-128 391
Msa0248420 MtrunA17_Chr5g0401451 38.069 549 312 10 15 561 29 551 2.34e-124 382
Msa0248420 MtrunA17_Chr7g0268781 37.748 604 329 12 15 599 26 601 2.79e-123 379
Msa0248420 MtrunA17_Chr1g0195911 38.276 580 304 12 15 573 26 572 3.33e-122 376
Msa0248420 MtrunA17_Chr7g0245201 39.344 549 296 10 29 569 64 583 1.06e-121 375
Msa0248420 MtrunA17_Chr8g0382231 32.958 622 342 10 10 607 37 607 2.17e-116 361
Msa0248420 MtrunA17_Chr1g0207461 39.042 543 298 9 1 535 1 518 4.62e-116 360
Msa0248420 MtrunA17_Chr1g0150191 35.809 606 351 11 1 594 1 580 7.83e-115 357
Msa0248420 MtrunA17_Chr3g0108331 36.239 585 313 12 12 594 11 537 4.35e-112 348
Msa0248420 MtrunA17_Chr4g0053841 35.145 552 328 9 15 562 2 527 4.50e-112 349
Msa0248420 MtrunA17_Chr5g0432861 33.901 587 332 9 12 594 12 546 1.41e-105 332
Msa0248420 MtrunA17_Chr8g0367891 37.963 540 272 9 1 518 1 499 1.77e-101 321
Msa0248420 MtrunA17_Chr5g0412591 37.500 536 263 11 1 507 1 493 2.63e-100 318
Msa0248420 MtrunA17_Chr4g0076521 36.508 504 286 10 1 501 1 473 3.45e-100 318
Msa0248420 MtrunA17_Chr1g0191711 32.738 504 279 8 10 510 42 488 8.81e-92 295
Msa0248420 MtrunA17_Chr2g0290741 34.263 502 290 10 1 501 1 463 4.23e-83 272
Msa0248420 MtrunA17_Chr4g0003891 34.031 382 218 5 207 580 38 393 2.57e-66 224
Msa0248420 MtrunA17_Chr4g0023801 30.088 565 335 13 35 582 14 535 4.30e-61 213
Msa0248420 MtrunA17_Chr2g0332281 33.679 386 221 6 215 594 24 380 4.53e-61 209
Msa0248420 MtrunA17_Chr1g0163311 27.739 566 330 15 36 576 14 525 3.18e-55 196
Msa0248420 MtrunA17_Chr4g0037661 30.097 515 302 13 65 562 45 518 5.70e-51 185
Msa0248420 MtrunA17_Chr2g0280541 26.551 403 245 8 93 489 1 358 6.52e-31 126
Msa0248420 MtrunA17_Chr1g0206621 37.857 140 86 1 30 168 72 211 1.75e-29 117
Msa0248420 MtrunA17_Chr1g0199641 62.791 43 16 0 1 43 1 43 5.70e-16 72.4
Msa0248420 MtrunA17_Chr5g0401181 30.667 150 93 4 19 167 43 182 1.54e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0248420 AT1G30440.1 74.169 662 145 10 1 636 1 662 0.0 970
Msa0248420 AT5G03250.1 55.340 618 232 14 1 606 1 586 0.0 661
Msa0248420 AT5G13600.1 52.769 614 248 13 1 607 1 579 0.0 581
Msa0248420 AT3G44820.1 48.976 586 272 8 8 573 5 583 0.0 566
Msa0248420 AT5G66560.1 44.214 674 274 16 16 609 9 660 0.0 530
Msa0248420 AT5G03250.2 52.767 506 196 13 112 606 1 474 1.02e-174 506
Msa0248420 AT5G66560.3 43.252 652 270 15 37 609 1 631 6.62e-167 492
Msa0248420 AT5G66560.4 46.021 578 253 14 69 609 66 621 9.89e-164 483
Msa0248420 AT3G50840.1 42.237 599 297 12 16 609 5 559 4.74e-154 456
Msa0248420 AT3G50840.2 40.741 567 288 11 47 609 1 523 3.33e-136 409
Msa0248420 AT3G50840.3 40.741 567 288 11 47 609 1 523 3.33e-136 409
Msa0248420 AT5G48800.1 39.899 594 297 11 15 594 30 577 7.92e-128 390
Msa0248420 AT5G66560.2 43.902 492 200 12 16 452 9 479 1.00e-122 373
Msa0248420 AT3G08570.1 37.983 595 329 11 29 611 37 603 1.97e-116 361
Msa0248420 AT3G08660.1 37.069 580 297 13 24 594 32 552 8.29e-116 358
Msa0248420 AT5G10250.2 35.526 608 313 11 10 593 34 586 3.20e-115 358
Msa0248420 AT5G67385.1 37.251 502 284 6 10 510 10 481 4.16e-115 357
Msa0248420 AT1G03010.1 37.037 594 322 14 5 573 16 582 1.77e-113 354
Msa0248420 AT1G03010.2 37.565 575 308 13 24 573 7 555 6.43e-113 352
Msa0248420 AT1G03010.3 37.565 575 308 13 24 573 33 581 1.67e-112 352
Msa0248420 AT5G10250.1 35.284 598 313 12 10 593 34 571 1.80e-109 343
Msa0248420 AT1G67900.5 39.579 523 278 8 1 501 1 507 5.28e-108 340
Msa0248420 AT1G67900.1 39.579 523 278 8 1 501 1 507 5.28e-108 340
Msa0248420 AT1G67900.3 39.579 523 278 8 1 501 1 507 5.28e-108 340
Msa0248420 AT1G67900.6 39.579 523 278 8 1 501 1 507 5.28e-108 340
Msa0248420 AT1G67900.2 39.579 523 278 8 1 501 1 507 5.28e-108 340
Msa0248420 AT1G67900.4 39.579 523 278 8 1 501 1 507 5.28e-108 340
Msa0248420 AT3G08660.3 37.127 536 271 12 68 594 14 492 7.98e-107 333
Msa0248420 AT4G37590.1 38.388 521 247 12 1 503 1 465 1.80e-106 334
Msa0248420 AT4G31820.1 38.791 513 259 15 1 503 1 468 9.42e-105 329
Msa0248420 AT5G67440.3 38.356 511 278 10 1 506 1 479 1.94e-104 329
Msa0248420 AT5G67440.1 38.356 511 278 10 1 506 1 479 1.94e-104 329
Msa0248420 AT2G47860.1 35.079 573 316 10 23 573 34 572 4.19e-104 330
Msa0248420 AT2G30520.1 34.220 564 318 8 4 562 9 524 1.91e-103 327
Msa0248420 AT5G67385.4 36.559 465 265 5 47 510 1 436 1.52e-102 323
Msa0248420 AT5G67385.5 36.559 465 265 5 47 510 1 436 1.52e-102 323
Msa0248420 AT5G67385.2 36.559 465 265 5 47 510 1 436 1.52e-102 323
Msa0248420 AT5G67385.3 36.559 465 265 5 47 510 1 436 1.52e-102 323
Msa0248420 AT2G23050.1 37.428 521 251 13 1 510 1 457 2.58e-101 317
Msa0248420 AT2G14820.2 35.113 618 351 15 1 600 1 586 4.19e-101 322
Msa0248420 AT2G14820.1 35.113 618 351 15 1 600 1 586 4.19e-101 322
Msa0248420 AT2G47860.3 33.725 596 316 11 23 573 34 595 9.94e-99 316
Msa0248420 AT5G47800.3 35.785 503 292 9 1 501 1 474 3.21e-95 304
Msa0248420 AT5G47800.1 35.785 503 292 9 1 501 1 474 3.21e-95 304
Msa0248420 AT5G47800.4 35.785 503 292 9 1 501 1 474 3.21e-95 304
Msa0248420 AT5G47800.2 35.785 503 292 9 1 501 114 587 2.02e-93 303
Msa0248420 AT5G67440.2 37.342 474 261 9 37 506 1 442 2.13e-91 293
Msa0248420 AT3G26490.1 36.158 531 283 10 1 501 1 505 5.88e-91 294
Msa0248420 AT3G26490.3 36.158 531 283 10 1 501 1 505 5.88e-91 294
Msa0248420 AT3G26490.4 36.158 531 283 10 1 501 1 505 5.88e-91 294
Msa0248420 AT3G49970.1 33.396 530 270 11 36 563 4 452 4.28e-90 289
Msa0248420 AT3G49970.2 33.396 530 270 11 36 563 4 452 4.28e-90 289
Msa0248420 AT2G30520.2 33.525 522 295 7 46 562 2 476 2.29e-89 288
Msa0248420 AT2G30520.3 33.525 522 295 7 46 562 2 476 2.29e-89 288
Msa0248420 AT4G31820.2 37.609 460 233 14 53 503 1 415 9.06e-85 275
Msa0248420 AT3G08660.2 35.520 442 228 10 24 459 32 422 6.40e-79 257
Msa0248420 AT5G64330.1 42.773 339 167 2 282 593 369 707 1.78e-76 259
Msa0248420 AT5G64330.1 41.549 284 142 5 7 275 33 307 1.03e-63 224
Msa0248420 AT2G47860.5 33.884 484 268 9 112 573 1 454 1.07e-73 246
Msa0248420 AT2G47860.2 33.884 484 268 9 112 573 1 454 1.07e-73 246
Msa0248420 AT2G47860.4 33.778 450 253 8 15 452 27 443 1.35e-71 238
Msa0248420 AT3G26490.2 34.440 482 260 11 1 452 1 456 6.87e-69 233
Msa0248420 AT5G64330.3 48.988 247 111 1 282 513 310 556 2.51e-67 231
Msa0248420 AT5G64330.3 39.286 252 129 5 39 275 6 248 1.77e-46 174
Msa0248420 AT2G23050.2 35.556 405 191 11 112 510 1 341 2.56e-67 224
Msa0248420 AT5G64330.2 48.988 247 111 1 282 513 369 615 5.24e-67 232
Msa0248420 AT5G64330.2 41.549 284 142 5 7 275 33 307 3.28e-64 224
Msa0248420 AT2G47860.6 32.135 473 253 9 15 452 27 466 1.52e-66 226
Msa0248420 AT3G15570.1 33.882 425 226 9 215 615 29 422 1.05e-62 215
Msa0248420 AT3G03510.1 30.347 547 270 18 81 617 8 453 1.60e-60 209
Msa0248420 AT5G17580.2 30.943 488 285 10 28 509 22 463 2.93e-59 209
Msa0248420 AT5G17580.1 30.943 488 285 10 28 509 7 448 3.95e-59 208
Msa0248420 AT1G52770.1 33.578 408 211 10 215 596 28 401 1.96e-57 201
Msa0248420 AT3G19850.1 28.049 492 298 8 35 506 13 468 1.13e-53 193
Msa0248420 AT1G50280.1 29.228 479 292 8 35 497 13 460 4.56e-53 191
Msa0248420 AT3G22104.1 28.905 557 306 12 28 572 6 484 7.86e-53 189
Msa0248420 AT5G48130.1 28.626 524 290 13 19 521 32 492 1.51e-52 191
Msa0248420 AT1G50280.2 30.090 442 266 7 68 497 17 427 3.40e-52 187
Msa0248420 AT3G22104.4 28.454 485 259 10 98 572 3 409 2.58e-39 150
Msa0248420 AT3G22104.2 28.454 485 259 10 98 572 3 409 2.58e-39 150
Msa0248420 AT3G22104.3 28.454 485 259 10 98 572 3 409 2.58e-39 150
Msa0248420 AT3G49900.2 34.839 155 90 4 18 167 57 205 3.83e-14 75.9
Msa0248420 AT3G49900.2 31.319 182 97 6 420 580 222 396 2.03e-12 70.5
Msa0248420 AT3G49900.1 31.844 179 97 5 420 580 222 393 3.90e-14 75.9
Msa0248420 AT3G49900.1 34.839 155 90 4 18 167 57 205 4.00e-14 75.9

Find 220 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACTGACCCAAATTTATT+TGG 0.101313 2_2:+32476944 Msa0248420:CDS
ACCGGCCACCCAAATAAATT+TGG 0.169719 2_2:-32476953 None:intergenic
TTTCTAAAGGTTGAGTCTTT+TGG 0.204015 2_2:+32474776 Msa0248420:five_prime_UTR
TCCATTGAATACGAGAAATT+TGG 0.207917 2_2:-32477472 None:intergenic
CTAAATGGCTTGTGTGAAAT+TGG 0.215346 2_2:+32474864 Msa0248420:exon
CAATTTCACACAAGCCATTT+AGG 0.239881 2_2:-32474863 None:intergenic
CTATGAGTTGTCAATTGTTT+TGG 0.248973 2_2:+32474508 Msa0248420:five_prime_UTR
CAATCTAAACTTGTATTCTT+TGG 0.250976 2_2:-32477049 None:intergenic
AGACCAAGTTTGTTCCTAAA+TGG 0.262412 2_2:+32474849 Msa0248420:exon
GAGGACCACTTGATTGAAAA+AGG 0.277475 2_2:-32476810 None:intergenic
CAATTGATTGGAGTGGTTCT+AGG 0.285618 2_2:+32474677 Msa0248420:five_prime_UTR
TTAAATCGACGTAAGGTTTC+CGG 0.287229 2_2:+32477205 Msa0248420:CDS
CCGACTTGCCCCGGCGGCTT+TGG 0.300388 2_2:+32477240 Msa0248420:CDS
ATTCACCTTCACGACATTCC+TGG 0.306044 2_2:+32476635 Msa0248420:CDS
TCAAACCTGTGACGATGTTC+TGG 0.307209 2_2:+32476862 Msa0248420:CDS
CTTGCCATGGATCAGATTAC+AGG 0.311344 2_2:+32477541 Msa0248420:CDS
CGCAGCAAGGGCTTGAAACT+TGG 0.320695 2_2:-32477698 None:intergenic
CTAGTATCAGACAATCTTGA+TGG 0.328216 2_2:+32478745 Msa0248420:CDS
CCCCTCCTGCATATCAAGTT+TGG 0.330467 2_2:+32477396 Msa0248420:CDS
TTTATTTATTTGTTAGTTAG+TGG 0.332725 2_2:+32474428 Msa0248420:five_prime_UTR
TCATCAAGCACTAACTTAAC+TGG 0.333054 2_2:-32474280 None:intergenic
GCACATGGGCAAAGCATTCT+AGG 0.341761 2_2:+32474103 Msa0248420:five_prime_UTR
TTCCTCTGATTCAGAAGCTT+TGG 0.343310 2_2:-32476603 None:intergenic
TTCACCTTCACGACATTCCT+GGG 0.351137 2_2:+32476636 Msa0248420:CDS
GCAGCTTGATCAAGCTGCTT+TGG 0.352308 2_2:+32477435 Msa0248420:CDS
TTTATTTGGGTGGCCGGTAT+TGG 0.353243 2_2:+32476958 Msa0248420:CDS
AAGAAATTTAAGAAGTGGTT+TGG 0.359275 2_2:+32478771 Msa0248420:CDS
GCTCTCTAGAAGCGGAGTTT+TGG 0.362369 2_2:+32476568 Msa0248420:CDS
TCCAGAGTATGCCAGGCCTT+TGG 0.363293 2_2:+32477726 Msa0248420:CDS
AACTTGAACTATGATTCTAA+TGG 0.368718 2_2:-32478674 None:intergenic
TATCTAATCAACCCTAGTTT+AGG 0.369332 2_2:-32474561 None:intergenic
CCACTGACCCAAATTTATTT+GGG 0.370052 2_2:+32476945 Msa0248420:CDS
ACTTGAACTATGATTCTAAT+GGG 0.375360 2_2:-32478673 None:intergenic
CTTGGTTGTTGACCTAAACT+AGG 0.378140 2_2:+32474549 Msa0248420:five_prime_UTR
AGCTGATGCATTTCAGCGTC+AGG 0.382481 2_2:+32474894 Msa0248420:CDS
TACCTTCAAGTAAATATCTA+TGG 0.383467 2_2:-32477767 None:intergenic
GACCAAACAGGAACTTCGTT+TGG 0.385712 2_2:-32477342 None:intergenic
TCATGGAATCTCGGGGCATT+AGG 0.390977 2_2:+32477128 Msa0248420:CDS
GCCAAATTTCTCGTATTCAA+TGG 0.392041 2_2:+32477471 Msa0248420:CDS
TGCCATAGATATTTACTTGA+AGG 0.393378 2_2:+32477765 Msa0248420:CDS
CTTGAAATGACTGAGGAATA+TGG 0.395110 2_2:+32476758 Msa0248420:CDS
CGGATCAAACGAGGGTGGTT+GGG 0.395561 2_2:+32478795 Msa0248420:CDS
CAAAGCCGCCGGGGCAAGTC+GGG 0.402893 2_2:-32477239 None:intergenic
AGGATCATCAACAAGCGCTT+GGG 0.416229 2_2:+32478945 Msa0248420:CDS
CCCAAATTTATTTGGGTGGC+CGG 0.418612 2_2:+32476952 Msa0248420:CDS
TCTCATAGGTTCTGTACGAC+TGG 0.419161 2_2:+32475921 Msa0248420:intron
GCTATCAACCTCTTATAAAT+CGG 0.425936 2_2:-32477103 None:intergenic
TGAGTTTACCGATTTATAAG+AGG 0.428569 2_2:+32477095 Msa0248420:CDS
GGAATTTATTTGTTTAATGT+TGG 0.429675 2_2:-32474157 None:intergenic
CCATCCCTACTTTCAATACC+TGG 0.430767 2_2:-32478837 None:intergenic
CGCCGGGGCAAGTCGGGTAC+TGG 0.433152 2_2:-32477233 None:intergenic
CCGGCCACCCAAATAAATTT+GGG 0.435121 2_2:-32476952 None:intergenic
AAGAGAGAGAGAACAATGAA+TGG 0.444008 2_2:-32474244 None:intergenic
GTCTGATACTAGAAAGCAAC+CGG 0.444780 2_2:-32478734 None:intergenic
AACTTCAACAACTATATCGC+TGG 0.445402 2_2:-32475949 None:intergenic
TAAATGGCTTGTGTGAAATT+GGG 0.445614 2_2:+32474865 Msa0248420:exon
AGAGCAACTATGCAGGCTAA+TGG 0.445791 2_2:+32478594 Msa0248420:CDS
GTCCAAACGAAGTTCCTGTT+TGG 0.445857 2_2:+32477340 Msa0248420:CDS
ATAAGAAGAGAGAAGAGAAA+AGG 0.446935 2_2:-32474212 None:intergenic
TCGGATCAAACGAGGGTGGT+TGG 0.447545 2_2:+32478794 Msa0248420:CDS
TAACATATACCTTGTGAAGA+TGG 0.448559 2_2:-32475986 None:intergenic
CAAAGAATACAAGTTTAGAT+TGG 0.448924 2_2:+32477050 Msa0248420:CDS
TATGCCAGGCCTTTGGATGA+TGG 0.451109 2_2:+32477733 Msa0248420:CDS
AGCATAGAAAGCAAGAGAAC+CGG 0.452027 2_2:-32477164 None:intergenic
GCGAAGGTGATCCGATCAAC+TGG 0.452879 2_2:-32477597 None:intergenic
TCTTGATCATTTCCTTGCCA+TGG 0.453035 2_2:+32477528 Msa0248420:CDS
GATAGCTGTCATGGAATCTC+GGG 0.454848 2_2:+32477120 Msa0248420:CDS
ATCAAGTGGTCCTCCGAAGT+TGG 0.458366 2_2:+32476819 Msa0248420:CDS
TATGCTAAAACGTATTTGCC+TGG 0.462210 2_2:+32477181 Msa0248420:CDS
GAAAACCAGGTATTGAAAGT+AGG 0.462978 2_2:+32478832 Msa0248420:CDS
CATTGAATCGCTTGCAGCAA+AGG 0.464806 2_2:+32476919 Msa0248420:CDS
GGATGGATAACATGAGGATG+AGG 0.466944 2_2:+32478854 Msa0248420:CDS
ATTAGGCAGGAAATCATTGC+CGG 0.470715 2_2:+32477145 Msa0248420:CDS
ATGCTTCTAATGAGAGCTTC+TGG 0.471327 2_2:-32478621 None:intergenic
AAACTTGGTGGTAAGGCAAA+AGG 0.474024 2_2:+32478925 Msa0248420:CDS
TCCAAAGGCCTGGCATACTC+TGG 0.474498 2_2:-32477727 None:intergenic
CGGCTGTTCCAGAGTATGCC+AGG 0.480333 2_2:+32477719 Msa0248420:CDS
CTTTCTGACTCCACCAACCA+TGG 0.480617 2_2:-32478571 None:intergenic
CTCAGTCATTTCAAGATGCT+CGG 0.483019 2_2:-32476750 None:intergenic
CTCTGGAACAGCCGCAGCAA+GGG 0.483062 2_2:-32477710 None:intergenic
GATTGAGAAACTTGGTGGTA+AGG 0.484108 2_2:+32478918 Msa0248420:CDS
TTGTGGAATGGAATAAGTAC+TGG 0.484290 2_2:+32477019 Msa0248420:CDS
AATTGATTGGAGTGGTTCTA+GGG 0.484493 2_2:+32474678 Msa0248420:five_prime_UTR
CTCCGCTTCTAGAGAGCAAA+GGG 0.485842 2_2:-32476562 None:intergenic
GGGGAATTGGAATTGAAAGA+AGG 0.486570 2_2:+32474797 Msa0248420:five_prime_UTR
AAGGATCATCAACAAGCGCT+TGG 0.487581 2_2:+32478944 Msa0248420:CDS
GCATATCAAGTTTGGAGAAA+CGG 0.488053 2_2:+32477404 Msa0248420:CDS
GATGAAGATGGCCAGTTGAT+CGG 0.488805 2_2:+32477586 Msa0248420:CDS
TTTCTCCAAACTTGATATGC+AGG 0.489280 2_2:-32477401 None:intergenic
TCAAATACATTCACCTGAGA+TGG 0.490208 2_2:-32479222 None:intergenic
TGGACCAGGCCCTTCTGCAT+TGG 0.490474 2_2:-32477322 None:intergenic
AATTTAAGAAGTGGTTTGGT+CGG 0.490890 2_2:+32478775 Msa0248420:CDS
GGTGGTCCCTTGCAGAGCCC+TGG 0.491765 2_2:+32476986 Msa0248420:CDS
CCCAAATAAATTTGGGTCAG+TGG 0.499752 2_2:-32476945 None:intergenic
TGATAGCTGTCATGGAATCT+CGG 0.500109 2_2:+32477119 Msa0248420:CDS
AAAACCAGGTATTGAAAGTA+GGG 0.500447 2_2:+32478833 Msa0248420:CDS
GGAATCTCGGGGCATTAGGC+AGG 0.501114 2_2:+32477132 Msa0248420:CDS
CATCAAATGTTGTGTGCCTA+TGG 0.501250 2_2:+32476720 Msa0248420:CDS
GCCTGGTTTAAATCGACGTA+AGG 0.502553 2_2:+32477198 Msa0248420:CDS
CAATGTGAAGCTCTTCAGCT+TGG 0.502575 2_2:-32476886 None:intergenic
ACTTCCAATGCAGAAGGGCC+TGG 0.503073 2_2:+32477318 Msa0248420:CDS
TGTTGAATTGAATCTGATTG+TGG 0.504739 2_2:+32474716 Msa0248420:five_prime_UTR
GCAGCAAGGGCTTGAAACTT+GGG 0.505459 2_2:-32477697 None:intergenic
TAAGAGGTTGATAGCTGTCA+TGG 0.506296 2_2:+32477111 Msa0248420:CDS
CCGTTCGAAGTAGACCAAAC+AGG 0.506791 2_2:-32477354 None:intergenic
AGAATACAAGTTTAGATTGG+TGG 0.508754 2_2:+32477053 Msa0248420:CDS
TGGTTGGGCGTCCGCAGTCA+AGG 0.510813 2_2:+32478810 Msa0248420:CDS
GGACCACCACGCTCCAATAC+CGG 0.510887 2_2:-32476971 None:intergenic
ACTCTGGAACAGCCGCAGCA+AGG 0.514323 2_2:-32477711 None:intergenic
CAGAAAGAGAGCAACTATGC+AGG 0.514538 2_2:+32478587 Msa0248420:CDS
GGAGTTGTGTCGAAGAAACT+CGG 0.516025 2_2:+32478967 Msa0248420:CDS
ACAGGTTTGAAGTGCCCTCA+TGG 0.516803 2_2:-32476849 None:intergenic
AGCGATATAGTTGTTGAAGT+TGG 0.517502 2_2:+32475951 Msa0248420:CDS
TTCCCTTTGCTCTCTAGAAG+CGG 0.518687 2_2:+32476560 Msa0248420:CDS
CGGCTATTGAAGTACGAAGC+TGG 0.520526 2_2:-32478714 None:intergenic
TCATGGAGTCTTTCCAACTT+CGG 0.524589 2_2:-32476832 None:intergenic
TTTATTTGTTAGTTAGTGGA+AGG 0.525800 2_2:+32474432 Msa0248420:five_prime_UTR
CCAAAGCCGCCGGGGCAAGT+CGG 0.525938 2_2:-32477240 None:intergenic
CTCATAGGTTCTGTACGACT+GGG 0.527049 2_2:+32475922 Msa0248420:intron
CCTGTTTGGTCTACTTCGAA+CGG 0.529380 2_2:+32477354 Msa0248420:CDS
GTGGAGATACCAAAGCCGCC+GGG 0.530973 2_2:-32477249 None:intergenic
CCCACGCTGCACAGAATGAA+AGG 0.531374 2_2:+32478647 Msa0248420:CDS
CAGCTTCGTACTTCAATAGC+CGG 0.531398 2_2:+32478715 Msa0248420:CDS
GGATCAAGAAATTTAAGAAG+TGG 0.532419 2_2:+32478766 Msa0248420:CDS
TGTTTAATGTTGGTGAGTGT+CGG 0.532726 2_2:-32474147 None:intergenic
GATGGATAACATGAGGATGA+GGG 0.535092 2_2:+32478855 Msa0248420:CDS
CCTTTCATTCTGTGCAGCGT+GGG 0.535407 2_2:-32478647 None:intergenic
CCAGGTATTGAAAGTAGGGA+TGG 0.537431 2_2:+32478837 Msa0248420:CDS
GGTGGAGATACCAAAGCCGC+CGG 0.537880 2_2:-32477250 None:intergenic
TTGGTCCAGAACATCGTCAC+AGG 0.539015 2_2:-32476867 None:intergenic
TAAACCATCATCCAAAGGCC+TGG 0.541161 2_2:-32477737 None:intergenic
ATGAAAGAAAACAGCACATG+TGG 0.541838 2_2:-32474363 None:intergenic
TAATAATGTTGAGAAGTTGA+AGG 0.542604 2_2:+32479056 Msa0248420:CDS
TTCAGCGTCAGGGTCAAGCC+TGG 0.548379 2_2:+32474905 Msa0248420:CDS
TTGGTTGTTGACCTAAACTA+GGG 0.549392 2_2:+32474550 Msa0248420:five_prime_UTR
ATGGTGGCAAAACTGATTGA+TGG 0.550952 2_2:+32477634 Msa0248420:CDS
CCATGCTCGATTGATGAAGA+TGG 0.551203 2_2:+32477574 Msa0248420:CDS
TGTGCAATGTGGTACAAAGA+AGG 0.552304 2_2:-32479318 None:intergenic
TAACAATCAATTGATTGGAG+TGG 0.552570 2_2:+32474670 Msa0248420:five_prime_UTR
GTAGTCTCACCCATGGTTGG+TGG 0.556559 2_2:+32478561 Msa0248420:intron
GGGTGGCCGGTATTGGAGCG+TGG 0.558111 2_2:+32476965 Msa0248420:CDS
GGGGTTCACTCGTAAAATCA+TGG 0.558705 2_2:-32477377 None:intergenic
GGTCCCTTGCAGAGCCCTGG+TGG 0.559347 2_2:+32476989 Msa0248420:CDS
GCCTTTCATTCTGTGCAGCG+TGG 0.559357 2_2:-32478648 None:intergenic
TGTATTTGAGATGGAAATGA+AGG 0.559842 2_2:+32479236 Msa0248420:three_prime_UTR
GTCCAGTACCCGACTTGCCC+CGG 0.560240 2_2:+32477231 Msa0248420:CDS
CTCGTTGCAAAATTCTGCTA+CGG 0.561543 2_2:+32476677 Msa0248420:CDS
AGGCAAGAGATTGAGAAACT+TGG 0.562530 2_2:+32478910 Msa0248420:CDS
AAGCCATTTAGGAACAAACT+TGG 0.566027 2_2:-32474852 None:intergenic
CAAGAGATTGAGAAACTTGG+TGG 0.566917 2_2:+32478913 Msa0248420:CDS
TCAGGTGAATGTATTTGAGA+TGG 0.567283 2_2:+32479227 Msa0248420:three_prime_UTR
CTGACCCAAATTTATTTGGG+TGG 0.567317 2_2:+32476948 Msa0248420:CDS
ACAGGAACTTCGTTTGGACC+AGG 0.567444 2_2:-32477336 None:intergenic
GCTGGTAACGCACAAGCACA+TGG 0.567999 2_2:+32474088 None:intergenic
AATGTAGTCTCACCCATGGT+TGG 0.574857 2_2:+32478558 Msa0248420:intron
GTCCGCAGTCAAGGAAAACC+AGG 0.577407 2_2:+32478819 Msa0248420:CDS
CCTTCACGACATTCCTGGGG+GGG 0.577801 2_2:+32476640 Msa0248420:CDS
TGCCAAAGCTTCTGAATCAG+AGG 0.579982 2_2:+32476601 Msa0248420:CDS
TCCAAACTTGATATGCAGGA+GGG 0.581282 2_2:-32477397 None:intergenic
TTTCTGACTCCACCAACCAT+GGG 0.582257 2_2:-32478570 None:intergenic
GTGTAGTGCTCAAGAAGGAT+CGG 0.586844 2_2:+32479011 Msa0248420:CDS
ACTTCCACCAGGGCTCTGCA+AGG 0.589029 2_2:-32476993 None:intergenic
CAAATGTGTAGTGCTCAAGA+AGG 0.589729 2_2:+32479006 Msa0248420:CDS
GGATCATCAACAAGCGCTTG+GGG 0.592474 2_2:+32478946 Msa0248420:CDS
CTCCAAACTTGATATGCAGG+AGG 0.592638 2_2:-32477398 None:intergenic
TGAAAGAAAACAGCACATGT+GGG 0.594118 2_2:-32474362 None:intergenic
CCATCTTCATCAATCGAGCA+TGG 0.594471 2_2:-32477574 None:intergenic
TTCCACAAAACACTTCCACC+AGG 0.597710 2_2:-32477004 None:intergenic
CACCTTCACGACATTCCTGG+GGG 0.599114 2_2:+32476638 Msa0248420:CDS
TCACCTTCACGACATTCCTG+GGG 0.599722 2_2:+32476637 Msa0248420:CDS
TCAACTACTTCCAATGCAGA+AGG 0.600159 2_2:+32477312 Msa0248420:CDS
GAGTTGTGTCGAAGAAACTC+GGG 0.601000 2_2:+32478968 Msa0248420:CDS
CCAAACTTGATATGCAGGAG+GGG 0.601427 2_2:-32477396 None:intergenic
ACTCCGCTTCTAGAGAGCAA+AGG 0.602649 2_2:-32476563 None:intergenic
TGTGGAATGGAATAAGTACT+GGG 0.603289 2_2:+32477020 Msa0248420:CDS
ACCACCTGTAATCTGATCCA+TGG 0.603327 2_2:-32477545 None:intergenic
AAGTCGGGTACTGGACTCAC+CGG 0.604525 2_2:-32477224 None:intergenic
ACTTCAACAACTATATCGCT+GGG 0.604586 2_2:-32475948 None:intergenic
CGGCGTGAAACTCGAACTTA+CGG 0.608879 2_2:+32476697 Msa0248420:CDS
CTTCCACCAGGGCTCTGCAA+GGG 0.608990 2_2:-32476992 None:intergenic
TGGAGTCTTTCCAACTTCGG+AGG 0.613226 2_2:-32476829 None:intergenic
AGTTCTTCTATCAGTGACAA+AGG 0.615429 2_2:+32479102 Msa0248420:CDS
CAACTACTTCCAATGCAGAA+GGG 0.618123 2_2:+32477313 Msa0248420:CDS
CAAGTTTCAAGCCCTTGCTG+CGG 0.622416 2_2:+32477699 Msa0248420:CDS
AAGTTTAGATTGGTGGTACG+AGG 0.622652 2_2:+32477060 Msa0248420:CDS
TCAAGTTTGGAGAAACGGAT+CGG 0.623514 2_2:+32477409 Msa0248420:CDS
CTGTAATCTGATCCATGGCA+AGG 0.624523 2_2:-32477540 None:intergenic
TGGTTTGGTCGGATCAAACG+AGG 0.629492 2_2:+32478786 Msa0248420:CDS
GATGCTCGGCAGCACACCAT+AGG 0.630199 2_2:-32476736 None:intergenic
ACCTTACGTCGATTTAAACC+AGG 0.632381 2_2:-32477199 None:intergenic
AGAACAATGAATGGAAACGT+AGG 0.641719 2_2:-32474235 None:intergenic
CGATATAAACCATCATCCAA+AGG 0.642132 2_2:-32477742 None:intergenic
GCTGATGCATTTCAGCGTCA+GGG 0.642653 2_2:+32474895 Msa0248420:CDS
AGAAAGAGTGCTCAAACATG+AGG 0.645720 2_2:+32478890 Msa0248420:CDS
CTGGTAACGCACAAGCACAT+GGG 0.653610 2_2:+32474089 None:intergenic
TGGCCGGTATTGGAGCGTGG+TGG 0.653763 2_2:+32476968 Msa0248420:CDS
AAGTAGGGATGGATAACATG+AGG 0.657466 2_2:+32478848 Msa0248420:CDS
CTTGAACTATGATTCTAATG+GGG 0.660628 2_2:-32478672 None:intergenic
GAAAGAAAACAGCACATGTG+GGG 0.660761 2_2:-32474361 None:intergenic
ATGACTGAGGAATATGGTGA+AGG 0.661743 2_2:+32476764 Msa0248420:CDS
GCCATGGATCAGATTACAGG+TGG 0.662491 2_2:+32477544 Msa0248420:CDS
CGAGCATCTTGAAATGACTG+AGG 0.662506 2_2:+32476751 Msa0248420:CDS
GAAGTTGGAAAGACTCCATG+AGG 0.663944 2_2:+32476834 Msa0248420:CDS
TCGGTTAGCAAACAGAACAA+TGG 0.664151 2_2:+32479030 Msa0248420:CDS
TTGGTCGGATCAAACGAGGG+TGG 0.670508 2_2:+32478790 Msa0248420:CDS
TTCGCTGACACCCATCACCA+TGG 0.672093 2_2:+32477615 Msa0248420:CDS
ATGGTGATGGGTGTCAGCGA+AGG 0.673043 2_2:-32477613 None:intergenic
TGGAGATACCAAAGCCGCCG+GGG 0.674941 2_2:-32477248 None:intergenic
GATGTCTTTCCATCTTCACA+AGG 0.675008 2_2:+32475977 Msa0248420:CDS
GATTGATGGTTACCTCGCAG+AGG 0.680021 2_2:+32477648 Msa0248420:CDS
ACCTTCACGACATTCCTGGG+GGG 0.686037 2_2:+32476639 Msa0248420:CDS
TCCACAAAACACTTCCACCA+GGG 0.688214 2_2:-32477003 None:intergenic
ATAGCTGTCATGGAATCTCG+GGG 0.692208 2_2:+32477121 Msa0248420:CDS
AAGAAGCATAATGTGCAATG+TGG 0.703382 2_2:-32479329 None:intergenic
CAGTACCCGACTTGCCCCGG+CGG 0.708990 2_2:+32477234 Msa0248420:CDS
GGTTTGGTCGGATCAAACGA+GGG 0.709075 2_2:+32478787 Msa0248420:CDS
CATCTGGGGCAACCTCTGCG+AGG 0.712597 2_2:-32477660 None:intergenic
GTGGAATGGAATAAGTACTG+GGG 0.725932 2_2:+32477021 Msa0248420:CDS
AAGTTGGAAAGACTCCATGA+GGG 0.728057 2_2:+32476835 Msa0248420:CDS
GCTGACACCCATCACCATGG+TGG 0.738037 2_2:+32477618 Msa0248420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAATTTATTTTCTTTG+TGG + chr2_2:32475466-32475485 Msa0248420:intron 10.0%
!!! TCTATTTTGTATTTATTAGA+AGG - chr2_2:32474181-32474200 None:intergenic 15.0%
!! AAAAATGTTTATTGGTAAAA+GGG - chr2_2:32474407-32474426 None:intergenic 15.0%
!! TAAAAATGTTTATTGGTAAA+AGG - chr2_2:32474408-32474427 None:intergenic 15.0%
!!! TTTATTTATTTGTTAGTTAG+TGG + chr2_2:32474428-32474447 Msa0248420:five_prime_UTR 15.0%
!!! TTAATTTTTGCTTATGTTTT+TGG + chr2_2:32474479-32474498 Msa0248420:five_prime_UTR 15.0%
!!! TAATGAAATTTGTGTTTTTT+AGG + chr2_2:32474590-32474609 Msa0248420:five_prime_UTR 15.0%
!!! AATGAAATTTGTGTTTTTTA+GGG + chr2_2:32474591-32474610 Msa0248420:five_prime_UTR 15.0%
!!! TAAATTAAAAGAGCATAAAA+AGG - chr2_2:32474948-32474967 None:intergenic 15.0%
!! AAGATATGTTTATTATATGA+TGG + chr2_2:32475759-32475778 Msa0248420:intron 15.0%
!! TGAAAATATTAAACATTAAG+TGG - chr2_2:32475897-32475916 None:intergenic 15.0%
!!! TCTTTTTTTTAAATGATGTT+TGG + chr2_2:32476304-32476323 Msa0248420:intron 15.0%
!! AAAAATATGCAACATAATTA+GGG + chr2_2:32478146-32478165 Msa0248420:intron 15.0%
!! GGAATTTATTTGTTTAATGT+TGG - chr2_2:32474160-32474179 None:intergenic 20.0%
!!! TGTTTTAACAATCAATTGAT+TGG + chr2_2:32474665-32474684 Msa0248420:five_prime_UTR 20.0%
!! GATTAAACAATATATATGAG+TGG + chr2_2:32475354-32475373 Msa0248420:intron 20.0%
!! AAAATATAGCACTAAGTAAT+AGG - chr2_2:32475674-32475693 None:intergenic 20.0%
!!! TTACTTAGTGCTATATTTTT+TGG + chr2_2:32475675-32475694 Msa0248420:intron 20.0%
!!! TTTATTATATGATGGTGAAT+CGG + chr2_2:32475767-32475786 Msa0248420:intron 20.0%
!!! TGATTTGTTAAAATTCACAA+GGG - chr2_2:32476153-32476172 None:intergenic 20.0%
!!! TTGATTTGTTAAAATTCACA+AGG - chr2_2:32476154-32476173 None:intergenic 20.0%
!!! TAGTTAGTTTTAATATGCTT+CGG + chr2_2:32477823-32477842 Msa0248420:intron 20.0%
!! GGTATGGTATATATTATAAT+GGG + chr2_2:32477844-32477863 Msa0248420:intron 20.0%
!!! ATTATAATGGGTTTATCTTA+TGG + chr2_2:32477856-32477875 Msa0248420:intron 20.0%
!! AACATATATAATATTCACTC+AGG - chr2_2:32477918-32477937 None:intergenic 20.0%
!! GAAAAATATGCAACATAATT+AGG + chr2_2:32478145-32478164 Msa0248420:intron 20.0%
!! AAAATATGCAACATAATTAG+GGG + chr2_2:32478147-32478166 Msa0248420:intron 20.0%
!!! TTTTCAATCAAATATGCTTT+GGG - chr2_2:32478324-32478343 None:intergenic 20.0%
!!! ATTTTCAATCAAATATGCTT+TGG - chr2_2:32478325-32478344 None:intergenic 20.0%
!!! GAAAATTTTCTGTATTTTCA+AGG - chr2_2:32478452-32478471 None:intergenic 20.0%
!!! GAAAATTTTCTTTGTTGTTT+TGG + chr2_2:32478462-32478481 Msa0248420:intron 20.0%
!!! ATTTGTTTGAATTTTGAAAG+AGG + chr2_2:32479369-32479388 Msa0248420:three_prime_UTR 20.0%
!! TTTATTTGTTAGTTAGTGGA+AGG + chr2_2:32474432-32474451 Msa0248420:five_prime_UTR 25.0%
!!! TTGTCAATTGTTTTGGTTTT+TGG + chr2_2:32474515-32474534 Msa0248420:five_prime_UTR 25.0%
!!! AGGGTTTTATTTTGATTTTG+AGG + chr2_2:32474610-32474629 Msa0248420:five_prime_UTR 25.0%
!! AAAGAGCATAAAAAGGATAA+GGG - chr2_2:32474941-32474960 None:intergenic 25.0%
!! AAAAGAGCATAAAAAGGATA+AGG - chr2_2:32474942-32474961 None:intergenic 25.0%
!! TGTTTGTGATTGTGAATTTT+AGG + chr2_2:32475026-32475045 Msa0248420:intron 25.0%
!!! TGATTGTGAATTTTAGGATT+TGG + chr2_2:32475032-32475051 Msa0248420:intron 25.0%
!! TTTCTTTTAGTGTTTATCAG+TGG + chr2_2:32475110-32475129 Msa0248420:intron 25.0%
! TTGAAGAAATGATTCTGTTA+AGG + chr2_2:32475179-32475198 Msa0248420:intron 25.0%
!! TTATTTTCTTTGTGGTCTTT+AGG + chr2_2:32475474-32475493 Msa0248420:intron 25.0%
! GTATGAATGAAATAAACGTA+TGG - chr2_2:32475706-32475725 None:intergenic 25.0%
! TCTCAATTAAAATGACCTAA+AGG - chr2_2:32475814-32475833 None:intergenic 25.0%
!! AATATTTTCATTGCTCTCAT+AGG + chr2_2:32475907-32475926 Msa0248420:intron 25.0%
! ATTTGGGTCTCATATAAATT+TGG + chr2_2:32476122-32476141 Msa0248420:intron 25.0%
! TTTGGGTCTCATATAAATTT+GGG + chr2_2:32476123-32476142 Msa0248420:intron 25.0%
! CAATCTAAACTTGTATTCTT+TGG - chr2_2:32477052-32477071 None:intergenic 25.0%
! CAAAGAATACAAGTTTAGAT+TGG + chr2_2:32477050-32477069 Msa0248420:CDS 25.0%
!!! ATTTTTTGATCTTCTTCAGA+TGG - chr2_2:32477274-32477293 None:intergenic 25.0%
! AGAAGATCAAAAAATTCTTC+TGG + chr2_2:32477279-32477298 Msa0248420:CDS 25.0%
!!! AAGTTTTAAGTTAACATCTG+GGG - chr2_2:32477677-32477696 None:intergenic 25.0%
!!! GAAGTTTTAAGTTAACATCT+GGG - chr2_2:32477678-32477697 None:intergenic 25.0%
! TACCTTCAAGTAAATATCTA+TGG - chr2_2:32477770-32477789 None:intergenic 25.0%
! CGGTATGGTATATATTATAA+TGG + chr2_2:32477843-32477862 Msa0248420:intron 25.0%
! TATTAAAAAGTTACTACCTC+CGG + chr2_2:32477994-32478013 Msa0248420:intron 25.0%
!! AGTTTTTGTGATTTAGTCAA+CGG - chr2_2:32478036-32478055 None:intergenic 25.0%
!! CACAAAAACTTTAAGAATGT+TGG + chr2_2:32478046-32478065 Msa0248420:intron 25.0%
!! GTTTTACAAGTTTACTCTTT+AGG + chr2_2:32478073-32478092 Msa0248420:intron 25.0%
! AACGCAGTTGAAAATTTAAT+AGG + chr2_2:32478191-32478210 Msa0248420:intron 25.0%
! ACGCAGTTGAAAATTTAATA+GGG + chr2_2:32478192-32478211 Msa0248420:intron 25.0%
! GAAAATATAGATAGGGTTTA+GGG + chr2_2:32478236-32478255 Msa0248420:intron 25.0%
!! AGTTTGAAAACGTTTTACAA+AGG - chr2_2:32478363-32478382 None:intergenic 25.0%
!! ACGTTTTCAAACTATATTGT+TGG + chr2_2:32478370-32478389 Msa0248420:intron 25.0%
!!! TTTCTGTATTTTCAAGGATT+GGG - chr2_2:32478446-32478465 None:intergenic 25.0%
!!! TTTTCTGTATTTTCAAGGAT+TGG - chr2_2:32478447-32478466 None:intergenic 25.0%
! ACTTGAACTATGATTCTAAT+GGG - chr2_2:32478676-32478695 None:intergenic 25.0%
! AACTTGAACTATGATTCTAA+TGG - chr2_2:32478677-32478696 None:intergenic 25.0%
! AAGAAATTTAAGAAGTGGTT+TGG + chr2_2:32478771-32478790 Msa0248420:CDS 25.0%
! TAATAATGTTGAGAAGTTGA+AGG + chr2_2:32479056-32479075 Msa0248420:CDS 25.0%
!!! ACAAATGAACATTTTAGAGT+AGG - chr2_2:32479355-32479374 None:intergenic 25.0%
ATAAGAAGAGAGAAGAGAAA+AGG - chr2_2:32474215-32474234 None:intergenic 30.0%
! CTATGAGTTGTCAATTGTTT+TGG + chr2_2:32474508-32474527 Msa0248420:five_prime_UTR 30.0%
TATCTAATCAACCCTAGTTT+AGG - chr2_2:32474564-32474583 None:intergenic 30.0%
TAACAATCAATTGATTGGAG+TGG + chr2_2:32474670-32474689 Msa0248420:five_prime_UTR 30.0%
TGTTGAATTGAATCTGATTG+TGG + chr2_2:32474716-32474735 Msa0248420:five_prime_UTR 30.0%
ATTGAATCTGATTGTGGATT+TGG + chr2_2:32474722-32474741 Msa0248420:intron 30.0%
TTGAATCTGATTGTGGATTT+GGG + chr2_2:32474723-32474742 Msa0248420:intron 30.0%
!!! TTTGGGTCTTTTTTTTGTTG+TGG + chr2_2:32474740-32474759 Msa0248420:intron 30.0%
!!! TTGGGTCTTTTTTTTGTTGT+GGG + chr2_2:32474741-32474760 Msa0248420:intron 30.0%
!!! TTTTTTTTGTTGTGGGTTTC+TGG + chr2_2:32474748-32474767 Msa0248420:intron 30.0%
!!! TTTTTTTGTTGTGGGTTTCT+GGG + chr2_2:32474749-32474768 Msa0248420:intron 30.0%
!! GTTTCTGGGAATTTTTCTAA+AGG + chr2_2:32474763-32474782 Msa0248420:five_prime_UTR 30.0%
!! TTTCTAAAGGTTGAGTCTTT+TGG + chr2_2:32474776-32474795 Msa0248420:five_prime_UTR 30.0%
!! TTCTAAAGGTTGAGTCTTTT+GGG + chr2_2:32474777-32474796 Msa0248420:five_prime_UTR 30.0%
! TAAATGGCTTGTGTGAAATT+GGG + chr2_2:32474865-32474884 Msa0248420:exon 30.0%
!!! GTTTTTCTGCTTTAAGTTGT+TGG + chr2_2:32475063-32475082 Msa0248420:intron 30.0%
!! TAAGTTGTTGGTTTACTGAT+AGG + chr2_2:32475075-32475094 Msa0248420:intron 30.0%
GATCTATCTAGTATCTATCA+AGG - chr2_2:32475224-32475243 None:intergenic 30.0%
AATCCCAAATTCTACATAGA+GGG - chr2_2:32475246-32475265 None:intergenic 30.0%
AAATCTGTAATCTGTGCATT+TGG + chr2_2:32475380-32475399 Msa0248420:intron 30.0%
! GTGAGTTTGAAGTATCATAA+GGG - chr2_2:32475731-32475750 None:intergenic 30.0%
! TGTGAGTTTGAAGTATCATA+AGG - chr2_2:32475732-32475751 None:intergenic 30.0%
TGACCTAAAGGAAATAACAA+CGG - chr2_2:32475802-32475821 None:intergenic 30.0%
TAACATATACCTTGTGAAGA+TGG - chr2_2:32475989-32476008 None:intergenic 30.0%
TGAGACCCAAATGATTTAAT+GGG - chr2_2:32476114-32476133 None:intergenic 30.0%
ATGAGACCCAAATGATTTAA+TGG - chr2_2:32476115-32476134 None:intergenic 30.0%
TTGGGTCTCATATAAATTTG+GGG + chr2_2:32476124-32476143 Msa0248420:intron 30.0%
TAGCTGATGCACTATTAATA+CGG + chr2_2:32476253-32476272 Msa0248420:intron 30.0%
AGCGTATATACAAATACAGA+GGG - chr2_2:32476495-32476514 None:intergenic 30.0%
AAGCGTATATACAAATACAG+AGG - chr2_2:32476496-32476515 None:intergenic 30.0%
CACTTGATTGAAAAAGGTTT+CGG - chr2_2:32476807-32476826 None:intergenic 30.0%
AGAATACAAGTTTAGATTGG+TGG + chr2_2:32477053-32477072 Msa0248420:CDS 30.0%
!! TGAGTTTACCGATTTATAAG+AGG + chr2_2:32477095-32477114 Msa0248420:CDS 30.0%
GCTATCAACCTCTTATAAAT+CGG - chr2_2:32477106-32477125 None:intergenic 30.0%
TCCATTGAATACGAGAAATT+TGG - chr2_2:32477475-32477494 None:intergenic 30.0%
!!! GGAAGTTTTAAGTTAACATC+TGG - chr2_2:32477679-32477698 None:intergenic 30.0%
TGCCATAGATATTTACTTGA+AGG + chr2_2:32477765-32477784 Msa0248420:CDS 30.0%
!! AGTTTTAATATGCTTCGGTA+TGG + chr2_2:32477828-32477847 Msa0248420:intron 30.0%
! GTTTTTGTGATTTAGTCAAC+GGG - chr2_2:32478035-32478054 None:intergenic 30.0%
!! TACTCTTTAGGATAGAGAAT+TGG + chr2_2:32478085-32478104 Msa0248420:intron 30.0%
CGCAGTTGAAAATTTAATAG+GGG + chr2_2:32478193-32478212 Msa0248420:intron 30.0%
TAATAGGGGTCTAATAAGAA+TGG + chr2_2:32478207-32478226 Msa0248420:intron 30.0%
GACAAGGGAAAATATAGATA+GGG + chr2_2:32478229-32478248 Msa0248420:intron 30.0%
GGAAAATATAGATAGGGTTT+AGG + chr2_2:32478235-32478254 Msa0248420:intron 30.0%
! AATATGCTTTGGGTAAAGTA+AGG - chr2_2:32478314-32478333 None:intergenic 30.0%
GATTGAAAATCACATATCCT+TGG + chr2_2:32478335-32478354 Msa0248420:intron 30.0%
! TTGGGAATAAAAGCATAAAC+TGG - chr2_2:32478428-32478447 None:intergenic 30.0%
ACTGTTATGCTTATTGATGT+TGG + chr2_2:32478493-32478512 Msa0248420:intron 30.0%
CTTGAACTATGATTCTAATG+GGG - chr2_2:32478675-32478694 None:intergenic 30.0%
GGATCAAGAAATTTAAGAAG+TGG + chr2_2:32478766-32478785 Msa0248420:CDS 30.0%
!! AATTTAAGAAGTGGTTTGGT+CGG + chr2_2:32478775-32478794 Msa0248420:CDS 30.0%
!! AAAACCAGGTATTGAAAGTA+GGG + chr2_2:32478833-32478852 Msa0248420:CDS 30.0%
! TGTATTTGAGATGGAAATGA+AGG + chr2_2:32479236-32479255 Msa0248420:three_prime_UTR 30.0%
! TGTTTAATGTTGGTGAGTGT+CGG - chr2_2:32474150-32474169 None:intergenic 35.0%
AGAACAATGAATGGAAACGT+AGG - chr2_2:32474238-32474257 None:intergenic 35.0%
AAGAGAGAGAGAACAATGAA+TGG - chr2_2:32474247-32474266 None:intergenic 35.0%
TCATCAAGCACTAACTTAAC+TGG - chr2_2:32474283-32474302 None:intergenic 35.0%
TGAAAGAAAACAGCACATGT+GGG - chr2_2:32474365-32474384 None:intergenic 35.0%
ATGAAAGAAAACAGCACATG+TGG - chr2_2:32474366-32474385 None:intergenic 35.0%
!! TTTTTGGTAGAGAACTCACT+TGG + chr2_2:32474531-32474550 Msa0248420:five_prime_UTR 35.0%
TTGGTTGTTGACCTAAACTA+GGG + chr2_2:32474550-32474569 Msa0248420:five_prime_UTR 35.0%
! AATTGATTGGAGTGGTTCTA+GGG + chr2_2:32474678-32474697 Msa0248420:five_prime_UTR 35.0%
! TCTAAAGGTTGAGTCTTTTG+GGG + chr2_2:32474778-32474797 Msa0248420:five_prime_UTR 35.0%
! AGACCAAGTTTGTTCCTAAA+TGG + chr2_2:32474849-32474868 Msa0248420:exon 35.0%
AAGCCATTTAGGAACAAACT+TGG - chr2_2:32474855-32474874 None:intergenic 35.0%
CAATTTCACACAAGCCATTT+AGG - chr2_2:32474866-32474885 None:intergenic 35.0%
! CTAAATGGCTTGTGTGAAAT+TGG + chr2_2:32474864-32474883 Msa0248420:exon 35.0%
GATAAGGGTAGATAAATACC+AGG - chr2_2:32474926-32474945 None:intergenic 35.0%
TGGTTTACTGATAGGTTACT+TGG + chr2_2:32475083-32475102 Msa0248420:intron 35.0%
AGATCCCTCTATGTAGAATT+TGG + chr2_2:32475239-32475258 Msa0248420:intron 35.0%
GATCCCTCTATGTAGAATTT+GGG + chr2_2:32475240-32475259 Msa0248420:intron 35.0%
CAATCCCAAATTCTACATAG+AGG - chr2_2:32475247-32475266 None:intergenic 35.0%
! CTCTATGTAGAATTTGGGAT+TGG + chr2_2:32475245-32475264 Msa0248420:intron 35.0%
! ATGTAGAATTTGGGATTGGT+TGG + chr2_2:32475249-32475268 Msa0248420:intron 35.0%
GATGGCAATTTGCATGTATA+AGG + chr2_2:32475556-32475575 Msa0248420:intron 35.0%
! AAGGGAACCTTTTGTATGAT+AGG + chr2_2:32475615-32475634 Msa0248420:intron 35.0%
ACTTTGGCCTATCATACAAA+AGG - chr2_2:32475625-32475644 None:intergenic 35.0%
AAGTTCATGTAACTGGACTT+TGG - chr2_2:32475641-32475660 None:intergenic 35.0%
!! ACTCCGTTGTTATTTCCTTT+AGG + chr2_2:32475796-32475815 Msa0248420:intron 35.0%
ACTTCAACAACTATATCGCT+GGG - chr2_2:32475951-32475970 None:intergenic 35.0%
AACTTCAACAACTATATCGC+TGG - chr2_2:32475952-32475971 None:intergenic 35.0%
AGCGATATAGTTGTTGAAGT+TGG + chr2_2:32475951-32475970 Msa0248420:CDS 35.0%
ATGCGTCCCATTAAATCATT+TGG + chr2_2:32476105-32476124 Msa0248420:intron 35.0%
TGCGTCCCATTAAATCATTT+GGG + chr2_2:32476106-32476125 Msa0248420:intron 35.0%
TGGGTCTCATATAAATTTGG+GGG + chr2_2:32476125-32476144 Msa0248420:intron 35.0%
TGTTAGCGTTGTTCATTTAG+AGG + chr2_2:32476199-32476218 Msa0248420:intron 35.0%
TAAATGATGTTTGGCTGACT+TGG + chr2_2:32476313-32476332 Msa0248420:intron 35.0%
TACTCAATGTTGCTACTGTT+TGG + chr2_2:32476451-32476470 Msa0248420:intron 35.0%
AACTGCATTAAGTGTGCATA+GGG - chr2_2:32476542-32476561 None:intergenic 35.0%
CTTGAAATGACTGAGGAATA+TGG + chr2_2:32476758-32476777 Msa0248420:CDS 35.0%
ATTGAAAAAGGTTTCGGCTT+GGG - chr2_2:32476801-32476820 None:intergenic 35.0%
!!! CGAAACCTTTTTCAATCAAG+TGG + chr2_2:32476805-32476824 Msa0248420:CDS 35.0%
TCCACTGACCCAAATTTATT+TGG + chr2_2:32476944-32476963 Msa0248420:CDS 35.0%
CCACTGACCCAAATTTATTT+GGG + chr2_2:32476945-32476964 Msa0248420:CDS 35.0%
TTGTGGAATGGAATAAGTAC+TGG + chr2_2:32477019-32477038 Msa0248420:CDS 35.0%
TGTGGAATGGAATAAGTACT+GGG + chr2_2:32477020-32477039 Msa0248420:CDS 35.0%
TATGCTAAAACGTATTTGCC+TGG + chr2_2:32477181-32477200 Msa0248420:CDS 35.0%
TTAAATCGACGTAAGGTTTC+CGG + chr2_2:32477205-32477224 Msa0248420:CDS 35.0%
! TTTTGATCTTCTTCAGATGG+TGG - chr2_2:32477271-32477290 None:intergenic 35.0%
TTTCTCCAAACTTGATATGC+AGG - chr2_2:32477404-32477423 None:intergenic 35.0%
GCATATCAAGTTTGGAGAAA+CGG + chr2_2:32477404-32477423 Msa0248420:CDS 35.0%
GCCAAATTTCTCGTATTCAA+TGG + chr2_2:32477471-32477490 Msa0248420:CDS 35.0%
CGATATAAACCATCATCCAA+AGG - chr2_2:32477745-32477764 None:intergenic 35.0%
GGTCTAATAAGAATGGACAA+GGG + chr2_2:32478214-32478233 Msa0248420:intron 35.0%
GGACAAGGGAAAATATAGAT+AGG + chr2_2:32478228-32478247 Msa0248420:intron 35.0%
ATATAGATAGGGTTTAGGGA+TGG + chr2_2:32478240-32478259 Msa0248420:intron 35.0%
AAGTAAGGTCACTCAAATCA+CGG - chr2_2:32478299-32478318 None:intergenic 35.0%
AAAAAATGTAGTCTCACCCA+TGG + chr2_2:32478554-32478573 Msa0248420:intron 35.0%
CTAGTATCAGACAATCTTGA+TGG + chr2_2:32478745-32478764 Msa0248420:CDS 35.0%
!! GAAAACCAGGTATTGAAAGT+AGG + chr2_2:32478832-32478851 Msa0248420:CDS 35.0%
AGTTCTTCTATCAGTGACAA+AGG + chr2_2:32479102-32479121 Msa0248420:CDS 35.0%
! GAACATTTTAGACGCTAAGA+AGG - chr2_2:32479147-32479166 None:intergenic 35.0%
TCAAATACATTCACCTGAGA+TGG - chr2_2:32479225-32479244 None:intergenic 35.0%
TCAGGTGAATGTATTTGAGA+TGG + chr2_2:32479227-32479246 Msa0248420:three_prime_UTR 35.0%
! AAGAAGCATAATGTGCAATG+TGG - chr2_2:32479332-32479351 None:intergenic 35.0%
GAAAGAAAACAGCACATGTG+GGG - chr2_2:32474364-32474383 None:intergenic 40.0%
CTTGGTTGTTGACCTAAACT+AGG + chr2_2:32474549-32474568 Msa0248420:five_prime_UTR 40.0%
!!! TTTGAGGTTGTTTTTGCACG+TGG + chr2_2:32474626-32474645 Msa0248420:five_prime_UTR 40.0%
!!! TTGAGGTTGTTTTTGCACGT+GGG + chr2_2:32474627-32474646 Msa0248420:five_prime_UTR 40.0%
CAATTGATTGGAGTGGTTCT+AGG + chr2_2:32474677-32474696 Msa0248420:five_prime_UTR 40.0%
!!! TGGTTCTAGGGTTTTGAAAG+TGG + chr2_2:32474690-32474709 Msa0248420:five_prime_UTR 40.0%
GGGGAATTGGAATTGAAAGA+AGG + chr2_2:32474797-32474816 Msa0248420:five_prime_UTR 40.0%
CAGTCTCAATCTTCATTGAC+AGG - chr2_2:32475416-32475435 None:intergenic 40.0%
GATGTCTTTCCATCTTCACA+AGG + chr2_2:32475977-32475996 Msa0248420:CDS 40.0%
TTCAACGCACTCTCTTTGAT+TGG + chr2_2:32476071-32476090 Msa0248420:intron 40.0%
! ACAAATCAAAGAGAGTGTGC+TGG + chr2_2:32476165-32476184 Msa0248420:intron 40.0%
ACTGCATTAAGTGTGCATAG+GGG - chr2_2:32476541-32476560 None:intergenic 40.0%
GAACTGCATTAAGTGTGCAT+AGG - chr2_2:32476543-32476562 None:intergenic 40.0%
TTCCTCTGATTCAGAAGCTT+TGG - chr2_2:32476606-32476625 None:intergenic 40.0%
CTCGTTGCAAAATTCTGCTA+CGG + chr2_2:32476677-32476696 Msa0248420:CDS 40.0%
CATCAAATGTTGTGTGCCTA+TGG + chr2_2:32476720-32476739 Msa0248420:CDS 40.0%
CTCAGTCATTTCAAGATGCT+CGG - chr2_2:32476753-32476772 None:intergenic 40.0%
ATGACTGAGGAATATGGTGA+AGG + chr2_2:32476764-32476783 Msa0248420:CDS 40.0%
GATTGAAAAAGGTTTCGGCT+TGG - chr2_2:32476802-32476821 None:intergenic 40.0%
GAGGACCACTTGATTGAAAA+AGG - chr2_2:32476813-32476832 None:intergenic 40.0%
TCATGGAGTCTTTCCAACTT+CGG - chr2_2:32476835-32476854 None:intergenic 40.0%
AAGTTGGAAAGACTCCATGA+GGG + chr2_2:32476835-32476854 Msa0248420:CDS 40.0%
CCCAAATAAATTTGGGTCAG+TGG - chr2_2:32476948-32476967 None:intergenic 40.0%
CTGACCCAAATTTATTTGGG+TGG + chr2_2:32476948-32476967 Msa0248420:CDS 40.0%
! GTGGAATGGAATAAGTACTG+GGG + chr2_2:32477021-32477040 Msa0248420:CDS 40.0%
! AAGTTTAGATTGGTGGTACG+AGG + chr2_2:32477060-32477079 Msa0248420:CDS 40.0%
!! TAAGAGGTTGATAGCTGTCA+TGG + chr2_2:32477111-32477130 Msa0248420:CDS 40.0%
TGATAGCTGTCATGGAATCT+CGG + chr2_2:32477119-32477138 Msa0248420:CDS 40.0%
ATTAGGCAGGAAATCATTGC+CGG + chr2_2:32477145-32477164 Msa0248420:CDS 40.0%
AGCATAGAAAGCAAGAGAAC+CGG - chr2_2:32477167-32477186 None:intergenic 40.0%
!! ACCTTACGTCGATTTAAACC+AGG - chr2_2:32477202-32477221 None:intergenic 40.0%
TCAACTACTTCCAATGCAGA+AGG + chr2_2:32477312-32477331 Msa0248420:CDS 40.0%
CAACTACTTCCAATGCAGAA+GGG + chr2_2:32477313-32477332 Msa0248420:CDS 40.0%
TCCAAACTTGATATGCAGGA+GGG - chr2_2:32477400-32477419 None:intergenic 40.0%
TCAAGTTTGGAGAAACGGAT+CGG + chr2_2:32477409-32477428 Msa0248420:CDS 40.0%
TCTTGATCATTTCCTTGCCA+TGG + chr2_2:32477528-32477547 Msa0248420:CDS 40.0%
! ATCAATCAGTTTTGCCACCA+TGG - chr2_2:32477635-32477654 None:intergenic 40.0%
ATGGTGGCAAAACTGATTGA+TGG + chr2_2:32477634-32477653 Msa0248420:CDS 40.0%
TATTCACTCAGGCCAACAAA+TGG - chr2_2:32477907-32477926 None:intergenic 40.0%
TTCGATACTGCAATGCTTCT+AGG + chr2_2:32477952-32477971 Msa0248420:intron 40.0%
GGGTCTAATAAGAATGGACA+AGG + chr2_2:32478213-32478232 Msa0248420:intron 40.0%
!!! AACGTTTTACAAAGGTGCCA+AGG - chr2_2:32478355-32478374 None:intergenic 40.0%
ATGCTTCTAATGAGAGCTTC+TGG - chr2_2:32478624-32478643 None:intergenic 40.0%
GTCTGATACTAGAAAGCAAC+CGG - chr2_2:32478737-32478756 None:intergenic 40.0%
AAGTAGGGATGGATAACATG+AGG + chr2_2:32478848-32478867 Msa0248420:CDS 40.0%
GATGGATAACATGAGGATGA+GGG + chr2_2:32478855-32478874 Msa0248420:CDS 40.0%
!! AGAAAGAGTGCTCAAACATG+AGG + chr2_2:32478890-32478909 Msa0248420:CDS 40.0%
AGGCAAGAGATTGAGAAACT+TGG + chr2_2:32478910-32478929 Msa0248420:CDS 40.0%
CAAGAGATTGAGAAACTTGG+TGG + chr2_2:32478913-32478932 Msa0248420:CDS 40.0%
! GATTGAGAAACTTGGTGGTA+AGG + chr2_2:32478918-32478937 Msa0248420:CDS 40.0%
! AAACTTGGTGGTAAGGCAAA+AGG + chr2_2:32478925-32478944 Msa0248420:CDS 40.0%
CAAATGTGTAGTGCTCAAGA+AGG + chr2_2:32479006-32479025 Msa0248420:CDS 40.0%
TCGGTTAGCAAACAGAACAA+TGG + chr2_2:32479030-32479049 Msa0248420:CDS 40.0%
!! CTACTTTGCTTTTCCATCTC+AGG + chr2_2:32479209-32479228 Msa0248420:three_prime_UTR 40.0%
TGTGCAATGTGGTACAAAGA+AGG - chr2_2:32479321-32479340 None:intergenic 40.0%
!! GGTTGAGTCTTTTGGGGAAT+TGG + chr2_2:32474784-32474803 Msa0248420:five_prime_UTR 45.0%
!! GGGATTGGTTGGTGTTCTTA+TGG + chr2_2:32475260-32475279 Msa0248420:intron 45.0%
ACATGCAAATTGCCATCGCT+GGG - chr2_2:32475553-32475572 None:intergenic 45.0%
TACATGCAAATTGCCATCGC+TGG - chr2_2:32475554-32475573 None:intergenic 45.0%
TGTGTATACCACCTCTGACT+AGG + chr2_2:32475588-32475607 Msa0248420:intron 45.0%
CACCTCTGACTAGGAGTTAA+GGG + chr2_2:32475597-32475616 Msa0248420:intron 45.0%
TTCCCTTAACTCCTAGTCAG+AGG - chr2_2:32475602-32475621 None:intergenic 45.0%
GCAGAGCAAGTTCATGTAAC+TGG - chr2_2:32475648-32475667 None:intergenic 45.0%
TCTCATAGGTTCTGTACGAC+TGG + chr2_2:32475921-32475940 Msa0248420:intron 45.0%
CTCATAGGTTCTGTACGACT+GGG + chr2_2:32475922-32475941 Msa0248420:intron 45.0%
ACAAATACAGAGGGCGAGTT+TGG - chr2_2:32476486-32476505 None:intergenic 45.0%
! TTCCCTTTGCTCTCTAGAAG+CGG + chr2_2:32476560-32476579 Msa0248420:CDS 45.0%
TGCCAAAGCTTCTGAATCAG+AGG + chr2_2:32476601-32476620 Msa0248420:CDS 45.0%
ATTCACCTTCACGACATTCC+TGG + chr2_2:32476635-32476654 Msa0248420:CDS 45.0%
TTCACCTTCACGACATTCCT+GGG + chr2_2:32476636-32476655 Msa0248420:CDS 45.0%
CGAGCATCTTGAAATGACTG+AGG + chr2_2:32476751-32476770 Msa0248420:CDS 45.0%
GAAGTTGGAAAGACTCCATG+AGG + chr2_2:32476834-32476853 Msa0248420:CDS 45.0%
TCAAACCTGTGACGATGTTC+TGG + chr2_2:32476862-32476881 Msa0248420:CDS 45.0%
CAATGTGAAGCTCTTCAGCT+TGG - chr2_2:32476889-32476908 None:intergenic 45.0%
CATTGAATCGCTTGCAGCAA+AGG + chr2_2:32476919-32476938 Msa0248420:CDS 45.0%
CCGGCCACCCAAATAAATTT+GGG - chr2_2:32476955-32476974 None:intergenic 45.0%
CCCAAATTTATTTGGGTGGC+CGG + chr2_2:32476952-32476971 Msa0248420:CDS 45.0%
ACCGGCCACCCAAATAAATT+TGG - chr2_2:32476956-32476975 None:intergenic 45.0%
TTTATTTGGGTGGCCGGTAT+TGG + chr2_2:32476958-32476977 Msa0248420:CDS 45.0%
TCCACAAAACACTTCCACCA+GGG - chr2_2:32477006-32477025 None:intergenic 45.0%
TTCCACAAAACACTTCCACC+AGG - chr2_2:32477007-32477026 None:intergenic 45.0%
!!! GGTGGAAGTGTTTTGTGGAA+TGG + chr2_2:32477007-32477026 Msa0248420:CDS 45.0%
GATAGCTGTCATGGAATCTC+GGG + chr2_2:32477120-32477139 Msa0248420:CDS 45.0%
ATAGCTGTCATGGAATCTCG+GGG + chr2_2:32477121-32477140 Msa0248420:CDS 45.0%
GCCTGGTTTAAATCGACGTA+AGG + chr2_2:32477198-32477217 Msa0248420:CDS 45.0%
GTCCAAACGAAGTTCCTGTT+TGG + chr2_2:32477340-32477359 Msa0248420:CDS 45.0%
GACCAAACAGGAACTTCGTT+TGG - chr2_2:32477345-32477364 None:intergenic 45.0%
CCTGTTTGGTCTACTTCGAA+CGG + chr2_2:32477354-32477373 Msa0248420:CDS 45.0%
GGGGTTCACTCGTAAAATCA+TGG - chr2_2:32477380-32477399 None:intergenic 45.0%
CCAAACTTGATATGCAGGAG+GGG - chr2_2:32477399-32477418 None:intergenic 45.0%
CTCCAAACTTGATATGCAGG+AGG - chr2_2:32477401-32477420 None:intergenic 45.0%
CTGTAATCTGATCCATGGCA+AGG - chr2_2:32477543-32477562 None:intergenic 45.0%
CTTGCCATGGATCAGATTAC+AGG + chr2_2:32477541-32477560 Msa0248420:CDS 45.0%
ACCACCTGTAATCTGATCCA+TGG - chr2_2:32477548-32477567 None:intergenic 45.0%
CCATCTTCATCAATCGAGCA+TGG - chr2_2:32477577-32477596 None:intergenic 45.0%
! AGTTTTGCCACCATGGTGAT+GGG - chr2_2:32477628-32477647 None:intergenic 45.0%
TAAACCATCATCCAAAGGCC+TGG - chr2_2:32477740-32477759 None:intergenic 45.0%
TCAACGGGATCCTATGTTCA+GGG - chr2_2:32478020-32478039 None:intergenic 45.0%
AATGTAGTCTCACCCATGGT+TGG + chr2_2:32478558-32478577 Msa0248420:intron 45.0%
TTTCTGACTCCACCAACCAT+GGG - chr2_2:32478573-32478592 None:intergenic 45.0%
CAGAAAGAGAGCAACTATGC+AGG + chr2_2:32478587-32478606 Msa0248420:CDS 45.0%
AGAGCAACTATGCAGGCTAA+TGG + chr2_2:32478594-32478613 Msa0248420:CDS 45.0%
CAGCTTCGTACTTCAATAGC+CGG + chr2_2:32478715-32478734 Msa0248420:CDS 45.0%
!! TACCTGGTTTTCCTTGACTG+CGG - chr2_2:32478824-32478843 None:intergenic 45.0%
CCATCCCTACTTTCAATACC+TGG - chr2_2:32478840-32478859 None:intergenic 45.0%
!! CCAGGTATTGAAAGTAGGGA+TGG + chr2_2:32478837-32478856 Msa0248420:CDS 45.0%
GGATGGATAACATGAGGATG+AGG + chr2_2:32478854-32478873 Msa0248420:CDS 45.0%
AAGGATCATCAACAAGCGCT+TGG + chr2_2:32478944-32478963 Msa0248420:CDS 45.0%
AGGATCATCAACAAGCGCTT+GGG + chr2_2:32478945-32478964 Msa0248420:CDS 45.0%
GGAGTTGTGTCGAAGAAACT+CGG + chr2_2:32478967-32478986 Msa0248420:CDS 45.0%
GAGTTGTGTCGAAGAAACTC+GGG + chr2_2:32478968-32478987 Msa0248420:CDS 45.0%
GTGTAGTGCTCAAGAAGGAT+CGG + chr2_2:32479011-32479030 Msa0248420:CDS 45.0%
!! AAATAAATAAAAATGTTTAT+TGG - chr2_2:32474415-32474434 None:intergenic 5.0%
! GCACATGGGCAAAGCATTCT+AGG + chr2_2:32474103-32474122 Msa0248420:five_prime_UTR 50.0%
AGCTGATGCATTTCAGCGTC+AGG + chr2_2:32474894-32474913 Msa0248420:CDS 50.0%
GCTGATGCATTTCAGCGTCA+GGG + chr2_2:32474895-32474914 Msa0248420:CDS 50.0%
GCTTCTTATTGTCCCAGCGA+TGG + chr2_2:32475538-32475557 Msa0248420:intron 50.0%
CCTTAACTCCTAGTCAGAGG+TGG - chr2_2:32475599-32475618 None:intergenic 50.0%
CCACCTCTGACTAGGAGTTA+AGG + chr2_2:32475596-32475615 Msa0248420:intron 50.0%
! CTCCGCTTCTAGAGAGCAAA+GGG - chr2_2:32476565-32476584 None:intergenic 50.0%
! ACTCCGCTTCTAGAGAGCAA+AGG - chr2_2:32476566-32476585 None:intergenic 50.0%
!! GCTCTCTAGAAGCGGAGTTT+TGG + chr2_2:32476568-32476587 Msa0248420:CDS 50.0%
TCACCTTCACGACATTCCTG+GGG + chr2_2:32476637-32476656 Msa0248420:CDS 50.0%
!! TCAAATGTTTTTGCCCCCCC+AGG - chr2_2:32476656-32476675 None:intergenic 50.0%
CGGCGTGAAACTCGAACTTA+CGG + chr2_2:32476697-32476716 Msa0248420:CDS 50.0%
ATCAAGTGGTCCTCCGAAGT+TGG + chr2_2:32476819-32476838 Msa0248420:CDS 50.0%
TGGAGTCTTTCCAACTTCGG+AGG - chr2_2:32476832-32476851 None:intergenic 50.0%
! ACAGGTTTGAAGTGCCCTCA+TGG - chr2_2:32476852-32476871 None:intergenic 50.0%
TTGGTCCAGAACATCGTCAC+AGG - chr2_2:32476870-32476889 None:intergenic 50.0%
! TCATGGAATCTCGGGGCATT+AGG + chr2_2:32477128-32477147 Msa0248420:CDS 50.0%
ACAGGAACTTCGTTTGGACC+AGG - chr2_2:32477339-32477358 None:intergenic 50.0%
CCGTTCGAAGTAGACCAAAC+AGG - chr2_2:32477357-32477376 None:intergenic 50.0%
CCCCTCCTGCATATCAAGTT+TGG + chr2_2:32477396-32477415 Msa0248420:CDS 50.0%
GCAGCTTGATCAAGCTGCTT+TGG + chr2_2:32477435-32477454 Msa0248420:CDS 50.0%
GCCATGGATCAGATTACAGG+TGG + chr2_2:32477544-32477563 Msa0248420:CDS 50.0%
! CAGTTTTGCCACCATGGTGA+TGG - chr2_2:32477629-32477648 None:intergenic 50.0%
! GATTGATGGTTACCTCGCAG+AGG + chr2_2:32477648-32477667 Msa0248420:CDS 50.0%
GCAGCAAGGGCTTGAAACTT+GGG - chr2_2:32477700-32477719 None:intergenic 50.0%
CAAGTTTCAAGCCCTTGCTG+CGG + chr2_2:32477699-32477718 Msa0248420:CDS 50.0%
TATGCCAGGCCTTTGGATGA+TGG + chr2_2:32477733-32477752 Msa0248420:CDS 50.0%
GCCACAGTTGAGCCATTTGT+TGG + chr2_2:32477892-32477911 Msa0248420:intron 50.0%
GCCAACAAATGGCTCAACTG+TGG - chr2_2:32477896-32477915 None:intergenic 50.0%
GTCAACGGGATCCTATGTTC+AGG - chr2_2:32478021-32478040 None:intergenic 50.0%
CTTTCTGACTCCACCAACCA+TGG - chr2_2:32478574-32478593 None:intergenic 50.0%
CCTTTCATTCTGTGCAGCGT+GGG - chr2_2:32478650-32478669 None:intergenic 50.0%
CGGCTATTGAAGTACGAAGC+TGG - chr2_2:32478717-32478736 None:intergenic 50.0%
!! TGGTTTGGTCGGATCAAACG+AGG + chr2_2:32478786-32478805 Msa0248420:CDS 50.0%
! GGTTTGGTCGGATCAAACGA+GGG + chr2_2:32478787-32478806 Msa0248420:CDS 50.0%
GGATCATCAACAAGCGCTTG+GGG + chr2_2:32478946-32478965 Msa0248420:CDS 50.0%
CACCTTCACGACATTCCTGG+GGG + chr2_2:32476638-32476657 Msa0248420:CDS 55.0%
ACCTTCACGACATTCCTGGG+GGG + chr2_2:32476639-32476658 Msa0248420:CDS 55.0%
!!! GCCCTGGTGGAAGTGTTTTG+TGG + chr2_2:32477002-32477021 Msa0248420:CDS 55.0%
!! AAGTCGGGTACTGGACTCAC+CGG - chr2_2:32477227-32477246 None:intergenic 55.0%
ACTTCCAATGCAGAAGGGCC+TGG + chr2_2:32477318-32477337 Msa0248420:CDS 55.0%
GCGAAGGTGATCCGATCAAC+TGG - chr2_2:32477600-32477619 None:intergenic 55.0%
!! ATGGTGATGGGTGTCAGCGA+AGG - chr2_2:32477616-32477635 None:intergenic 55.0%
TTCGCTGACACCCATCACCA+TGG + chr2_2:32477615-32477634 Msa0248420:CDS 55.0%
CGCAGCAAGGGCTTGAAACT+TGG - chr2_2:32477701-32477720 None:intergenic 55.0%
TCCAGAGTATGCCAGGCCTT+TGG + chr2_2:32477726-32477745 Msa0248420:CDS 55.0%
TCCAAAGGCCTGGCATACTC+TGG - chr2_2:32477730-32477749 None:intergenic 55.0%
GTAGTCTCACCCATGGTTGG+TGG + chr2_2:32478561-32478580 Msa0248420:intron 55.0%
CCCACGCTGCACAGAATGAA+AGG + chr2_2:32478647-32478666 Msa0248420:CDS 55.0%
GCCTTTCATTCTGTGCAGCG+TGG - chr2_2:32478651-32478670 None:intergenic 55.0%
TTGGTCGGATCAAACGAGGG+TGG + chr2_2:32478790-32478809 Msa0248420:CDS 55.0%
TCGGATCAAACGAGGGTGGT+TGG + chr2_2:32478794-32478813 Msa0248420:CDS 55.0%
CGGATCAAACGAGGGTGGTT+GGG + chr2_2:32478795-32478814 Msa0248420:CDS 55.0%
GTCCGCAGTCAAGGAAAACC+AGG + chr2_2:32478819-32478838 Msa0248420:CDS 55.0%
TTCAGCGTCAGGGTCAAGCC+TGG + chr2_2:32474905-32474924 Msa0248420:CDS 60.0%
CCTTCACGACATTCCTGGGG+GGG + chr2_2:32476640-32476659 Msa0248420:CDS 60.0%
GATGCTCGGCAGCACACCAT+AGG - chr2_2:32476739-32476758 None:intergenic 60.0%
GGACCACCACGCTCCAATAC+CGG - chr2_2:32476974-32476993 None:intergenic 60.0%
CTTCCACCAGGGCTCTGCAA+GGG - chr2_2:32476995-32477014 None:intergenic 60.0%
ACTTCCACCAGGGCTCTGCA+AGG - chr2_2:32476996-32477015 None:intergenic 60.0%
! GGAATCTCGGGGCATTAGGC+AGG + chr2_2:32477132-32477151 Msa0248420:CDS 60.0%
TGGAGATACCAAAGCCGCCG+GGG - chr2_2:32477251-32477270 None:intergenic 60.0%
GTGGAGATACCAAAGCCGCC+GGG - chr2_2:32477252-32477271 None:intergenic 60.0%
GGTGGAGATACCAAAGCCGC+CGG - chr2_2:32477253-32477272 None:intergenic 60.0%
TGGACCAGGCCCTTCTGCAT+TGG - chr2_2:32477325-32477344 None:intergenic 60.0%
GCTGACACCCATCACCATGG+TGG + chr2_2:32477618-32477637 Msa0248420:CDS 60.0%
!! CTCTGGAACAGCCGCAGCAA+GGG - chr2_2:32477713-32477732 None:intergenic 60.0%
!! ACTCTGGAACAGCCGCAGCA+AGG - chr2_2:32477714-32477733 None:intergenic 60.0%
CGGCTGTTCCAGAGTATGCC+AGG + chr2_2:32477719-32477738 Msa0248420:CDS 60.0%
CTACCTCCGGCCCTGAACAT+AGG + chr2_2:32478007-32478026 Msa0248420:intron 60.0%
GATCCTATGTTCAGGGCCGG+AGG - chr2_2:32478013-32478032 None:intergenic 60.0%
CGGGATCCTATGTTCAGGGC+CGG - chr2_2:32478016-32478035 None:intergenic 60.0%
CCCCCCCAGGAATGTCGTGA+AGG - chr2_2:32476643-32476662 None:intergenic 65.0%
! TGGCCGGTATTGGAGCGTGG+TGG + chr2_2:32476968-32476987 Msa0248420:CDS 65.0%
! GTCCAGTACCCGACTTGCCC+CGG + chr2_2:32477231-32477250 Msa0248420:CDS 65.0%
! CATCTGGGGCAACCTCTGCG+AGG - chr2_2:32477663-32477682 None:intergenic 65.0%
TGGTTGGGCGTCCGCAGTCA+AGG + chr2_2:32478810-32478829 Msa0248420:CDS 65.0%
! GGGTGGCCGGTATTGGAGCG+TGG + chr2_2:32476965-32476984 Msa0248420:CDS 70.0%
GGTGGTCCCTTGCAGAGCCC+TGG + chr2_2:32476986-32477005 Msa0248420:CDS 70.0%
GGTCCCTTGCAGAGCCCTGG+TGG + chr2_2:32476989-32477008 Msa0248420:CDS 70.0%
! CAGTACCCGACTTGCCCCGG+CGG + chr2_2:32477234-32477253 Msa0248420:CDS 70.0%
CAAAGCCGCCGGGGCAAGTC+GGG - chr2_2:32477242-32477261 None:intergenic 70.0%
CCAAAGCCGCCGGGGCAAGT+CGG - chr2_2:32477243-32477262 None:intergenic 70.0%
CGCCGGGGCAAGTCGGGTAC+TGG - chr2_2:32477236-32477255 None:intergenic 75.0%
! CCGACTTGCCCCGGCGGCTT+TGG + chr2_2:32477240-32477259 Msa0248420:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 32474097 32479401 32474097 ID=Msa0248420;Name=Msa0248420
chr2_2 mRNA 32474097 32479401 32474097 ID=Msa0248420-mRNA-1;Parent=Msa0248420;Name=Msa0248420-mRNA-1;_AED=0.01;_eAED=0.01;_QI=747|1|1|1|0.75|0.6|5|249|647
chr2_2 exon 32474097 32474738 32474097 ID=Msa0248420-mRNA-1:exon:11048;Parent=Msa0248420-mRNA-1
chr2_2 exon 32474763 32474926 32474763 ID=Msa0248420-mRNA-1:exon:11049;Parent=Msa0248420-mRNA-1
chr2_2 exon 32475929 32475998 32475929 ID=Msa0248420-mRNA-1:exon:11050;Parent=Msa0248420-mRNA-1
chr2_2 exon 32476560 32477786 32476560 ID=Msa0248420-mRNA-1:exon:11051;Parent=Msa0248420-mRNA-1
chr2_2 exon 32478565 32479401 32478565 ID=Msa0248420-mRNA-1:exon:11052;Parent=Msa0248420-mRNA-1
chr2_2 five_prime_UTR 32474097 32474738 32474097 ID=Msa0248420-mRNA-1:five_prime_utr;Parent=Msa0248420-mRNA-1
chr2_2 five_prime_UTR 32474763 32474867 32474763 ID=Msa0248420-mRNA-1:five_prime_utr;Parent=Msa0248420-mRNA-1
chr2_2 CDS 32474868 32474926 32474868 ID=Msa0248420-mRNA-1:cds;Parent=Msa0248420-mRNA-1
chr2_2 CDS 32475929 32475998 32475929 ID=Msa0248420-mRNA-1:cds;Parent=Msa0248420-mRNA-1
chr2_2 CDS 32476560 32477786 32476560 ID=Msa0248420-mRNA-1:cds;Parent=Msa0248420-mRNA-1
chr2_2 CDS 32478565 32479152 32478565 ID=Msa0248420-mRNA-1:cds;Parent=Msa0248420-mRNA-1
chr2_2 three_prime_UTR 32479153 32479401 32479153 ID=Msa0248420-mRNA-1:three_prime_utr;Parent=Msa0248420-mRNA-1
Gene Sequence

>Msa0248420

ATGGCTTGTGTGAAATTGGGTTCTAAAGCTGATGCATTTCAGCGTCAGGGTCAAGCCTGGTTCTGTACGACTGGGCTTCCCAGCGATATAGTTGTTGAAGTTGGTGAGATGTCTTTCCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGCGGAGTTTTGGAAAGATCAATTGCCAAAGCTTCTGAATCAGAGGAAGAATGCGTCATTCACCTTCACGACATTCCTGGGGGGGCAAAAACATTTGAACTCGTTGCAAAATTCTGCTACGGCGTGAAACTCGAACTTACGGCATCAAATGTTGTGTGCCTATGGTGTGCTGCCGAGCATCTTGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTTCCCAAGCCGAAACCTTTTTCAATCAAGTGGTCCTCCGAAGTTGGAAAGACTCCATGAGGGCACTTCAAACCTGTGACGATGTTCTGGACCAAGCTGAAGAGCTTCACATTGTGAAGAGATGCATTGAATCGCTTGCAGCAAAGGCATCCACTGACCCAAATTTATTTGGGTGGCCGGTATTGGAGCGTGGTGGTCCCTTGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCAAAGAATACAAGTTTAGATTGGTGGTACGAGGATGTAGCAAATTTGAGTTTACCGATTTATAAGAGGTTGATAGCTGTCATGGAATCTCGGGGCATTAGGCAGGAAATCATTGCCGGTTCTCTTGCTTTCTATGCTAAAACGTATTTGCCTGGTTTAAATCGACGTAAGGTTTCCGGTGAGTCCAGTACCCGACTTGCCCCGGCGGCTTTGGTATCTCCACCATCTGAAGAAGATCAAAAAATTCTTCTGGAAGAGATTGATCAACTACTTCCAATGCAGAAGGGCCTGGTCCAAACGAAGTTCCTGTTTGGTCTACTTCGAACGGCCATGATTTTACGAGTGAACCCCTCCTGCATATCAAGTTTGGAGAAACGGATCGGAATGCAGCTTGATCAAGCTGCTTTGGAAGATCTCTTGATGCCAAATTTCTCGTATTCAATGGAGACACTTTACAATGTCGACTGTGTGCAAAGAATTCTTGATCATTTCCTTGCCATGGATCAGATTACAGGTGGTGCGTCTCCATGCTCGATTGATGAAGATGGCCAGTTGATCGGATCACCTTCGCTGACACCCATCACCATGGTGGCAAAACTGATTGATGGTTACCTCGCAGAGGTTGCCCCAGATGTTAACTTAAAACTTCCCAAGTTTCAAGCCCTTGCTGCGGCTGTTCCAGAGTATGCCAGGCCTTTGGATGATGGTTTATATCGTGCCATAGATATTTACTTGAAGTCTCACCCATGGTTGGTGGAGTCAGAAAGAGAGCAACTATGCAGGCTAATGGACTGCCAGAAGCTCTCATTAGAAGCATGCACCCACGCTGCACAGAATGAAAGGCTCCCCATTAGAATCATAGTTCAAGTTCTATTTTTTGAGCAGCTCCAGCTTCGTACTTCAATAGCCGGTTGCTTTCTAGTATCAGACAATCTTGATGGATCAAGAAATTTAAGAAGTGGTTTGGTCGGATCAAACGAGGGTGGTTGGGCGTCCGCAGTCAAGGAAAACCAGGTATTGAAAGTAGGGATGGATAACATGAGGATGAGGGTATCTGAGCTCGAGAAAGAGTGCTCAAACATGAGGCAAGAGATTGAGAAACTTGGTGGTAAGGCAAAAGGATCATCAACAAGCGCTTGGGGAGTTGTGTCGAAGAAACTCGGGTTTAAGATAAAGTCTCAAATGTGTAGTGCTCAAGAAGGATCGGTTAGCAAACAGAACAATGGACATAATAATGTTGAGAAGTTGAAGGACAGAAATGTAAAGCATAATAGAAGTTCTTCTATCAGTGACAAAGGATCAGTCTCTTCAATTATTCCTTCTTAG
Protein sequence

>Msa0248420

MACVKLGSKADAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERSIAKASESEEECVIHLHDIPGGAKTFELVAKFCYGVKLELTASNVVCLWCAAEHLEMTEEYGEGNLISQAETFFNQVVLRSWKDSMRALQTCDDVLDQAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNTSLDWWYEDVANLSLPIYKRLIAVMESRGIRQEIIAGSLAFYAKTYLPGLNRRKVSGESSTRLAPAALVSPPSEEDQKILLEEIDQLLPMQKGLVQTKFLFGLLRTAMILRVNPSCISSLEKRIGMQLDQAALEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQITGGASPCSIDEDGQLIGSPSLTPITMVAKLIDGYLAEVAPDVNLKLPKFQALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRNLRSGLVGSNEGGWASAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGGKAKGSSTSAWGVVSKKLGFKIKSQMCSAQEGSVSKQNNGHNNVEKLKDRNVKHNRSSSISDKGSVSSIIPS*