Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0252000 | XP_003596047.1 | 97.297 | 370 | 10 | 0 | 1 | 370 | 1 | 370 | 0.0 | 722 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0252000 | sp|Q9M0B8|WTR37_ARATH | 50.278 | 360 | 173 | 5 | 13 | 369 | 1 | 357 | 3.02e-121 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0252000 | G7IQT9 | 97.297 | 370 | 10 | 0 | 1 | 370 | 1 | 370 | 0.0 | 722 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0211430 | Msa0252000 | 0.847059 | 1.469308e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0252000 | MtrunA17_Chr2g0310441 | 97.297 | 370 | 10 | 0 | 1 | 370 | 1 | 370 | 0.0 | 722 |
| Msa0252000 | MtrunA17_Chr8g0334761 | 71.351 | 370 | 96 | 3 | 1 | 369 | 1 | 361 | 0.0 | 521 |
| Msa0252000 | MtrunA17_Chr8g0334771 | 73.262 | 374 | 95 | 4 | 1 | 370 | 1 | 373 | 0.0 | 518 |
| Msa0252000 | MtrunA17_Chr8g0334751 | 74.054 | 370 | 78 | 3 | 2 | 370 | 3 | 355 | 6.57e-177 | 496 |
| Msa0252000 | MtrunA17_Chr4g0073241 | 46.448 | 366 | 180 | 7 | 6 | 369 | 4 | 355 | 6.99e-108 | 320 |
| Msa0252000 | MtrunA17_Chr8g0334711 | 68.421 | 209 | 63 | 3 | 1 | 208 | 1 | 207 | 1.90e-90 | 270 |
| Msa0252000 | MtrunA17_Chr6g0483401 | 36.901 | 355 | 210 | 5 | 1 | 347 | 1 | 349 | 3.58e-71 | 226 |
| Msa0252000 | MtrunA17_Chr3g0142131 | 36.658 | 371 | 213 | 4 | 15 | 370 | 25 | 388 | 6.20e-71 | 227 |
| Msa0252000 | MtrunA17_Chr8g0334721 | 69.799 | 149 | 34 | 1 | 221 | 369 | 1 | 138 | 5.88e-69 | 214 |
| Msa0252000 | MtrunA17_Chr1g0155761 | 35.106 | 376 | 217 | 5 | 13 | 369 | 24 | 391 | 1.21e-67 | 218 |
| Msa0252000 | MtrunA17_Chr3g0081511 | 34.605 | 367 | 225 | 5 | 11 | 366 | 18 | 380 | 9.03e-67 | 216 |
| Msa0252000 | MtrunA17_Chr8g0354121 | 33.333 | 375 | 235 | 5 | 5 | 369 | 11 | 380 | 9.37e-67 | 216 |
| Msa0252000 | MtrunA17_Chr8g0334731 | 59.314 | 204 | 59 | 6 | 5 | 205 | 6 | 188 | 1.68e-66 | 209 |
| Msa0252000 | MtrunA17_Chr3g0081421 | 34.615 | 364 | 218 | 6 | 6 | 356 | 13 | 369 | 3.09e-66 | 214 |
| Msa0252000 | MtrunA17_Chr2g0284261 | 33.631 | 336 | 216 | 3 | 7 | 338 | 5 | 337 | 1.53e-65 | 212 |
| Msa0252000 | MtrunA17_Chr1g0160171 | 34.835 | 333 | 210 | 4 | 11 | 341 | 17 | 344 | 3.76e-64 | 209 |
| Msa0252000 | MtrunA17_Chr3g0114691 | 35.093 | 322 | 204 | 2 | 11 | 329 | 21 | 340 | 3.71e-63 | 206 |
| Msa0252000 | MtrunA17_Chr1g0164831 | 34.579 | 321 | 204 | 2 | 11 | 329 | 4 | 320 | 1.53e-61 | 201 |
| Msa0252000 | MtrunA17_Chr2g0278541 | 32.849 | 344 | 220 | 2 | 11 | 345 | 13 | 354 | 1.69e-61 | 202 |
| Msa0252000 | MtrunA17_Chr1g0186611 | 34.758 | 351 | 219 | 5 | 9 | 357 | 15 | 357 | 6.68e-61 | 199 |
| Msa0252000 | MtrunA17_Chr1g0186601 | 34.604 | 341 | 214 | 5 | 9 | 343 | 15 | 352 | 1.01e-60 | 199 |
| Msa0252000 | MtrunA17_Chr7g0255561 | 34.259 | 324 | 206 | 3 | 11 | 329 | 15 | 336 | 1.20e-59 | 197 |
| Msa0252000 | MtrunA17_Chr7g0255581 | 34.259 | 324 | 206 | 3 | 11 | 329 | 15 | 336 | 1.20e-59 | 197 |
| Msa0252000 | MtrunA17_Chr6g0463971 | 32.239 | 335 | 220 | 3 | 6 | 336 | 12 | 343 | 1.32e-59 | 196 |
| Msa0252000 | MtrunA17_Chr3g0129571 | 33.333 | 324 | 211 | 1 | 11 | 329 | 8 | 331 | 2.54e-59 | 196 |
| Msa0252000 | MtrunA17_Chr2g0278561 | 32.407 | 324 | 213 | 2 | 11 | 330 | 16 | 337 | 6.40e-59 | 196 |
| Msa0252000 | MtrunA17_Chr1g0182291 | 31.609 | 348 | 234 | 3 | 6 | 352 | 11 | 355 | 1.45e-58 | 194 |
| Msa0252000 | MtrunA17_Chr4g0059311 | 33.851 | 322 | 209 | 3 | 10 | 329 | 11 | 330 | 7.40e-58 | 191 |
| Msa0252000 | MtrunA17_Chr2g0278551 | 34.472 | 322 | 206 | 2 | 11 | 329 | 13 | 332 | 8.06e-58 | 192 |
| Msa0252000 | MtrunA17_Chr2g0332001 | 33.718 | 347 | 203 | 5 | 14 | 347 | 42 | 374 | 1.18e-57 | 192 |
| Msa0252000 | MtrunA17_Chr7g0271561 | 30.861 | 337 | 215 | 3 | 10 | 334 | 7 | 337 | 1.83e-57 | 191 |
| Msa0252000 | MtrunA17_Chr1g0186641 | 34.234 | 333 | 214 | 4 | 6 | 336 | 9 | 338 | 2.68e-57 | 190 |
| Msa0252000 | MtrunA17_Chr1g0186561 | 36.336 | 333 | 206 | 5 | 9 | 338 | 15 | 344 | 2.71e-57 | 190 |
| Msa0252000 | MtrunA17_Chr1g0184221 | 29.973 | 377 | 224 | 7 | 7 | 365 | 13 | 367 | 1.34e-56 | 189 |
| Msa0252000 | MtrunA17_Chr1g0160181 | 35.103 | 339 | 204 | 4 | 13 | 342 | 21 | 352 | 2.07e-56 | 189 |
| Msa0252000 | MtrunA17_Chr2g0290611 | 32.754 | 345 | 222 | 4 | 1 | 340 | 1 | 340 | 4.55e-55 | 185 |
| Msa0252000 | MtrunA17_Chr1g0186571 | 34.870 | 347 | 219 | 5 | 11 | 356 | 14 | 354 | 1.23e-54 | 183 |
| Msa0252000 | MtrunA17_Chr3g0126101 | 31.977 | 344 | 226 | 4 | 10 | 349 | 6 | 345 | 2.70e-54 | 182 |
| Msa0252000 | MtrunA17_Chr7g0263101 | 32.326 | 331 | 212 | 5 | 5 | 329 | 8 | 332 | 3.58e-54 | 182 |
| Msa0252000 | MtrunA17_Chr4g0050881 | 31.412 | 347 | 220 | 4 | 11 | 348 | 10 | 347 | 3.78e-54 | 182 |
| Msa0252000 | MtrunA17_Chr3g0114731 | 31.165 | 369 | 239 | 3 | 11 | 367 | 19 | 384 | 4.84e-54 | 183 |
| Msa0252000 | MtrunA17_Chr3g0129591 | 32.456 | 342 | 217 | 2 | 11 | 338 | 6 | 347 | 6.87e-54 | 181 |
| Msa0252000 | MtrunA17_Chr3g0129601 | 32.132 | 333 | 216 | 3 | 3 | 329 | 22 | 350 | 2.24e-53 | 180 |
| Msa0252000 | MtrunA17_Chr1g0171301 | 32.635 | 334 | 218 | 5 | 9 | 338 | 15 | 345 | 2.87e-53 | 180 |
| Msa0252000 | MtrunA17_Chr4g0051021 | 31.405 | 363 | 221 | 5 | 6 | 353 | 10 | 359 | 3.25e-53 | 180 |
| Msa0252000 | MtrunA17_Chr8g0383731 | 31.429 | 350 | 224 | 3 | 11 | 353 | 6 | 346 | 1.30e-52 | 178 |
| Msa0252000 | MtrunA17_Chr4g0050891 | 32.609 | 322 | 205 | 5 | 11 | 324 | 14 | 331 | 1.77e-51 | 175 |
| Msa0252000 | MtrunA17_Chr3g0129581 | 33.333 | 342 | 214 | 2 | 11 | 338 | 6 | 347 | 9.43e-51 | 173 |
| Msa0252000 | MtrunA17_Chr4g0050941 | 32.143 | 336 | 216 | 3 | 11 | 338 | 13 | 344 | 8.96e-50 | 171 |
| Msa0252000 | MtrunA17_Chr3g0114701 | 34.259 | 324 | 205 | 5 | 11 | 329 | 10 | 330 | 9.01e-49 | 169 |
| Msa0252000 | MtrunA17_Chr5g0413961 | 33.127 | 323 | 205 | 5 | 10 | 329 | 14 | 328 | 1.62e-47 | 164 |
| Msa0252000 | MtrunA17_Chr8g0334741 | 56.494 | 154 | 34 | 4 | 221 | 369 | 1 | 126 | 1.78e-47 | 157 |
| Msa0252000 | MtrunA17_Chr5g0428881 | 29.412 | 340 | 229 | 3 | 12 | 347 | 20 | 352 | 2.00e-46 | 162 |
| Msa0252000 | MtrunA17_Chr7g0227921 | 34.049 | 326 | 208 | 5 | 10 | 332 | 11 | 332 | 3.34e-45 | 159 |
| Msa0252000 | MtrunA17_Chr1g0160111 | 26.816 | 358 | 240 | 5 | 19 | 365 | 16 | 362 | 3.56e-45 | 159 |
| Msa0252000 | MtrunA17_Chr5g0441761 | 30.625 | 320 | 208 | 4 | 15 | 330 | 19 | 328 | 1.36e-44 | 157 |
| Msa0252000 | MtrunA17_Chr3g0114711 | 29.201 | 363 | 216 | 5 | 5 | 329 | 9 | 368 | 2.12e-44 | 157 |
| Msa0252000 | MtrunA17_Chr5g0408031 | 29.129 | 333 | 215 | 4 | 15 | 329 | 15 | 344 | 4.24e-40 | 145 |
| Msa0252000 | MtrunA17_Chr5g0413941 | 28.076 | 317 | 223 | 4 | 15 | 329 | 12 | 325 | 1.01e-39 | 144 |
| Msa0252000 | MtrunA17_Chr5g0407971 | 29.129 | 333 | 217 | 4 | 13 | 329 | 14 | 343 | 1.02e-39 | 145 |
| Msa0252000 | MtrunA17_Chr4g0050931 | 28.035 | 346 | 193 | 6 | 11 | 346 | 13 | 312 | 2.33e-39 | 142 |
| Msa0252000 | MtrunA17_Chr5g0429001 | 29.932 | 294 | 187 | 4 | 64 | 347 | 3 | 287 | 7.70e-39 | 141 |
| Msa0252000 | MtrunA17_Chr4g0051001 | 30.449 | 312 | 201 | 4 | 5 | 307 | 26 | 330 | 7.93e-39 | 141 |
| Msa0252000 | MtrunA17_Chr5g0407991 | 29.412 | 340 | 219 | 6 | 13 | 335 | 12 | 347 | 1.17e-38 | 142 |
| Msa0252000 | MtrunA17_Chr5g0413951 | 28.041 | 296 | 210 | 3 | 35 | 329 | 32 | 325 | 2.83e-38 | 140 |
| Msa0252000 | MtrunA17_Chr5g0404811 | 29.555 | 247 | 162 | 3 | 127 | 370 | 8 | 245 | 4.59e-38 | 137 |
| Msa0252000 | MtrunA17_Chr5g0413921 | 28.221 | 326 | 231 | 3 | 15 | 339 | 12 | 335 | 1.58e-37 | 138 |
| Msa0252000 | MtrunA17_Chr5g0408001 | 28.916 | 332 | 215 | 5 | 15 | 329 | 15 | 342 | 5.39e-37 | 137 |
| Msa0252000 | MtrunA17_Chr6g0451261 | 33.099 | 284 | 183 | 4 | 30 | 310 | 31 | 310 | 6.69e-37 | 142 |
| Msa0252000 | MtrunA17_Chr5g0408041 | 27.761 | 335 | 221 | 4 | 13 | 329 | 14 | 345 | 6.71e-37 | 137 |
| Msa0252000 | MtrunA17_Chr6g0451201 | 32.022 | 356 | 226 | 7 | 10 | 361 | 12 | 355 | 1.71e-36 | 135 |
| Msa0252000 | MtrunA17_Chr5g0413931 | 27.744 | 328 | 226 | 5 | 14 | 336 | 10 | 331 | 2.03e-36 | 135 |
| Msa0252000 | MtrunA17_Chr1g0177221 | 34.632 | 231 | 149 | 1 | 7 | 237 | 15 | 243 | 3.57e-36 | 132 |
| Msa0252000 | MtrunA17_Chr3g0084091 | 31.818 | 264 | 171 | 3 | 87 | 347 | 5 | 262 | 6.41e-36 | 132 |
| Msa0252000 | MtrunA17_Chr3g0126091 | 25.664 | 339 | 238 | 4 | 10 | 341 | 11 | 342 | 1.24e-35 | 133 |
| Msa0252000 | MtrunA17_Chr1g0211801 | 30.952 | 252 | 168 | 2 | 11 | 260 | 12 | 259 | 2.70e-35 | 130 |
| Msa0252000 | MtrunA17_Chr1g0150151 | 27.864 | 323 | 229 | 2 | 10 | 329 | 11 | 332 | 4.15e-35 | 132 |
| Msa0252000 | MtrunA17_Chr6g0451211 | 31.176 | 340 | 222 | 6 | 10 | 341 | 12 | 347 | 1.13e-33 | 128 |
| Msa0252000 | MtrunA17_Chr6g0451171 | 27.988 | 343 | 236 | 6 | 3 | 341 | 6 | 341 | 1.85e-30 | 119 |
| Msa0252000 | MtrunA17_Chr6g0451251 | 30.532 | 357 | 239 | 5 | 10 | 363 | 12 | 362 | 2.87e-30 | 119 |
| Msa0252000 | MtrunA17_Chr5g0399281 | 28.485 | 330 | 217 | 7 | 18 | 335 | 16 | 338 | 6.33e-30 | 117 |
| Msa0252000 | MtrunA17_Chr8g0369841 | 24.317 | 366 | 253 | 5 | 15 | 364 | 14 | 371 | 7.68e-29 | 115 |
| Msa0252000 | MtrunA17_Chr6g0451191 | 30.275 | 218 | 148 | 2 | 126 | 341 | 1 | 216 | 3.28e-28 | 110 |
| Msa0252000 | MtrunA17_Chr2g0278021 | 32.710 | 214 | 134 | 2 | 126 | 330 | 1 | 213 | 5.11e-28 | 111 |
| Msa0252000 | MtrunA17_Chr4g0056081 | 25.496 | 353 | 240 | 8 | 1 | 336 | 5 | 351 | 1.08e-22 | 97.8 |
| Msa0252000 | MtrunA17_Chr1g0211811 | 44.928 | 69 | 38 | 0 | 259 | 327 | 1 | 69 | 6.10e-16 | 72.4 |
| Msa0252000 | MtrunA17_Chr4g0050921 | 34.314 | 102 | 67 | 0 | 209 | 310 | 3 | 104 | 1.13e-15 | 73.2 |
| Msa0252000 | MtrunA17_Chr4g0050911 | 31.783 | 129 | 78 | 1 | 88 | 206 | 7 | 135 | 1.32e-14 | 70.9 |
| Msa0252000 | MtrunA17_Chr1g0177231 | 38.356 | 73 | 45 | 0 | 257 | 329 | 28 | 100 | 1.10e-13 | 67.4 |
| Msa0252000 | MtrunA17_Chr1g0172891 | 38.235 | 68 | 42 | 0 | 262 | 329 | 11 | 78 | 1.07e-12 | 64.3 |
| Msa0252000 | MtrunA17_Chr1g0182261 | 33.088 | 136 | 81 | 5 | 200 | 329 | 79 | 210 | 2.00e-12 | 66.2 |
| Msa0252000 | MtrunA17_Chr2g0278031 | 32.174 | 115 | 76 | 1 | 11 | 125 | 15 | 127 | 2.26e-12 | 63.5 |
| Msa0252000 | MtrunA17_Chr1g0172881 | 31.944 | 144 | 70 | 6 | 115 | 245 | 9 | 137 | 9.97e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0252000 | AT4G30420.2 | 50.000 | 368 | 178 | 5 | 5 | 369 | 3 | 367 | 4.19e-125 | 365 |
| Msa0252000 | AT4G30420.1 | 50.278 | 360 | 173 | 5 | 13 | 369 | 1 | 357 | 3.07e-122 | 358 |
| Msa0252000 | AT4G28040.1 | 41.918 | 365 | 196 | 5 | 9 | 369 | 6 | 358 | 3.74e-93 | 283 |
| Msa0252000 | AT4G28040.5 | 41.918 | 365 | 196 | 5 | 9 | 369 | 6 | 358 | 3.74e-93 | 283 |
| Msa0252000 | AT4G28040.3 | 41.918 | 365 | 196 | 5 | 9 | 369 | 6 | 358 | 3.74e-93 | 283 |
| Msa0252000 | AT4G28040.4 | 41.918 | 365 | 196 | 5 | 9 | 369 | 6 | 358 | 3.74e-93 | 283 |
| Msa0252000 | AT4G28040.2 | 41.918 | 365 | 196 | 5 | 9 | 369 | 6 | 358 | 3.74e-93 | 283 |
| Msa0252000 | AT1G75500.1 | 36.339 | 366 | 219 | 5 | 13 | 369 | 22 | 382 | 2.23e-70 | 225 |
| Msa0252000 | AT1G75500.2 | 36.339 | 366 | 219 | 5 | 13 | 369 | 22 | 382 | 2.23e-70 | 225 |
| Msa0252000 | AT3G18200.2 | 32.143 | 336 | 221 | 4 | 12 | 344 | 36 | 367 | 5.20e-66 | 214 |
| Msa0252000 | AT3G53210.1 | 35.165 | 364 | 221 | 5 | 13 | 369 | 12 | 367 | 8.64e-66 | 213 |
| Msa0252000 | AT5G64700.1 | 34.174 | 357 | 222 | 3 | 5 | 353 | 2 | 353 | 9.34e-64 | 207 |
| Msa0252000 | AT4G08300.1 | 35.860 | 343 | 209 | 5 | 1 | 336 | 1 | 339 | 2.82e-63 | 206 |
| Msa0252000 | AT1G21890.1 | 33.784 | 370 | 225 | 4 | 1 | 352 | 1 | 368 | 1.15e-61 | 203 |
| Msa0252000 | AT1G44800.1 | 33.819 | 343 | 223 | 3 | 1 | 341 | 1 | 341 | 1.76e-58 | 194 |
| Msa0252000 | AT5G07050.1 | 33.807 | 352 | 221 | 5 | 11 | 352 | 18 | 367 | 2.27e-58 | 195 |
| Msa0252000 | AT2G37460.1 | 33.043 | 345 | 215 | 6 | 6 | 340 | 10 | 348 | 4.08e-58 | 193 |
| Msa0252000 | AT1G09380.1 | 33.540 | 322 | 207 | 3 | 10 | 326 | 7 | 326 | 5.47e-58 | 193 |
| Msa0252000 | AT2G39510.1 | 31.694 | 366 | 237 | 5 | 6 | 366 | 3 | 360 | 1.65e-57 | 192 |
| Msa0252000 | AT3G53210.2 | 40.486 | 247 | 137 | 2 | 87 | 327 | 27 | 269 | 4.05e-57 | 189 |
| Msa0252000 | AT1G43650.1 | 32.143 | 336 | 218 | 4 | 13 | 344 | 9 | 338 | 5.76e-57 | 189 |
| Msa0252000 | AT2G40900.1 | 32.743 | 339 | 209 | 4 | 11 | 343 | 11 | 336 | 1.37e-56 | 190 |
| Msa0252000 | AT4G01440.1 | 31.231 | 333 | 220 | 4 | 11 | 339 | 10 | 337 | 2.34e-56 | 188 |
| Msa0252000 | AT5G13670.1 | 32.335 | 334 | 210 | 6 | 5 | 329 | 2 | 328 | 1.93e-55 | 186 |
| Msa0252000 | AT4G08290.1 | 33.628 | 339 | 214 | 5 | 6 | 336 | 8 | 343 | 2.36e-53 | 181 |
| Msa0252000 | AT3G56620.1 | 33.754 | 317 | 203 | 3 | 11 | 326 | 11 | 321 | 1.74e-52 | 179 |
| Msa0252000 | AT3G30340.1 | 30.792 | 341 | 232 | 2 | 1 | 339 | 1 | 339 | 8.43e-52 | 176 |
| Msa0252000 | AT3G18200.1 | 34.310 | 239 | 152 | 3 | 109 | 344 | 1 | 237 | 2.27e-51 | 172 |
| Msa0252000 | AT1G11450.3 | 32.249 | 338 | 218 | 4 | 11 | 341 | 16 | 349 | 6.30e-51 | 174 |
| Msa0252000 | AT1G11460.1 | 33.028 | 327 | 205 | 5 | 11 | 330 | 16 | 335 | 1.09e-50 | 173 |
| Msa0252000 | AT1G21890.2 | 33.648 | 318 | 199 | 2 | 1 | 308 | 1 | 316 | 1.33e-50 | 173 |
| Msa0252000 | AT3G28050.1 | 33.832 | 334 | 209 | 7 | 10 | 338 | 11 | 337 | 4.53e-50 | 172 |
| Msa0252000 | AT5G40230.1 | 34.259 | 324 | 207 | 3 | 10 | 329 | 20 | 341 | 1.10e-49 | 171 |
| Msa0252000 | AT1G01070.1 | 31.307 | 329 | 217 | 4 | 6 | 329 | 11 | 335 | 1.49e-49 | 171 |
| Msa0252000 | AT1G11450.5 | 33.333 | 309 | 195 | 4 | 40 | 341 | 1 | 305 | 2.66e-49 | 168 |
| Msa0252000 | AT4G01440.3 | 29.605 | 304 | 205 | 4 | 11 | 310 | 10 | 308 | 6.68e-49 | 167 |
| Msa0252000 | AT5G40240.1 | 32.927 | 328 | 213 | 4 | 10 | 332 | 19 | 344 | 5.82e-47 | 164 |
| Msa0252000 | AT5G40240.3 | 32.927 | 328 | 213 | 4 | 10 | 332 | 19 | 344 | 5.82e-47 | 164 |
| Msa0252000 | AT1G11450.2 | 33.223 | 301 | 190 | 4 | 48 | 341 | 2 | 298 | 5.84e-47 | 162 |
| Msa0252000 | AT5G40240.2 | 32.927 | 328 | 213 | 4 | 10 | 332 | 33 | 358 | 6.02e-47 | 164 |
| Msa0252000 | AT4G15540.1 | 35.312 | 320 | 196 | 4 | 10 | 329 | 16 | 324 | 1.26e-46 | 162 |
| Msa0252000 | AT4G15540.2 | 35.312 | 320 | 196 | 4 | 10 | 329 | 16 | 324 | 1.26e-46 | 162 |
| Msa0252000 | AT1G68170.1 | 29.885 | 348 | 234 | 3 | 12 | 353 | 4 | 347 | 3.18e-46 | 162 |
| Msa0252000 | AT1G68170.2 | 29.885 | 348 | 234 | 3 | 12 | 353 | 14 | 357 | 3.39e-46 | 162 |
| Msa0252000 | AT4G01430.1 | 29.878 | 328 | 223 | 4 | 7 | 329 | 5 | 330 | 3.75e-46 | 162 |
| Msa0252000 | AT1G70260.1 | 27.247 | 356 | 244 | 3 | 10 | 354 | 11 | 362 | 7.88e-46 | 161 |
| Msa0252000 | AT2G37450.2 | 30.581 | 327 | 198 | 5 | 6 | 329 | 4 | 304 | 1.32e-44 | 157 |
| Msa0252000 | AT1G11450.1 | 34.524 | 252 | 156 | 3 | 97 | 341 | 8 | 257 | 5.48e-44 | 153 |
| Msa0252000 | AT3G53210.3 | 35.115 | 262 | 152 | 4 | 13 | 268 | 12 | 261 | 4.73e-43 | 150 |
| Msa0252000 | AT1G01070.2 | 33.203 | 256 | 164 | 3 | 80 | 330 | 36 | 289 | 1.29e-42 | 151 |
| Msa0252000 | AT4G01440.5 | 31.004 | 229 | 157 | 1 | 112 | 339 | 1 | 229 | 1.70e-41 | 146 |
| Msa0252000 | AT4G01440.2 | 31.004 | 229 | 157 | 1 | 112 | 339 | 1 | 229 | 1.70e-41 | 146 |
| Msa0252000 | AT5G64700.2 | 32.308 | 260 | 166 | 2 | 5 | 256 | 2 | 259 | 4.69e-40 | 143 |
| Msa0252000 | AT1G11450.4 | 31.333 | 300 | 199 | 3 | 11 | 307 | 16 | 311 | 1.54e-39 | 143 |
| Msa0252000 | AT5G47470.2 | 31.562 | 320 | 205 | 7 | 15 | 329 | 62 | 372 | 2.60e-39 | 144 |
| Msa0252000 | AT5G47470.3 | 31.562 | 320 | 205 | 7 | 15 | 329 | 62 | 372 | 2.79e-39 | 144 |
| Msa0252000 | AT5G47470.1 | 31.562 | 320 | 205 | 7 | 15 | 329 | 34 | 344 | 2.89e-39 | 143 |
| Msa0252000 | AT4G01430.2 | 28.889 | 315 | 217 | 4 | 7 | 316 | 5 | 317 | 5.98e-38 | 139 |
| Msa0252000 | AT4G01450.2 | 29.730 | 333 | 229 | 2 | 11 | 343 | 10 | 337 | 1.61e-36 | 136 |
| Msa0252000 | AT1G25270.1 | 27.729 | 339 | 234 | 3 | 12 | 347 | 4 | 334 | 2.22e-35 | 133 |
| Msa0252000 | AT5G40210.1 | 30.363 | 303 | 187 | 6 | 35 | 333 | 37 | 319 | 4.35e-35 | 132 |
| Msa0252000 | AT1G60050.1 | 26.124 | 356 | 249 | 4 | 7 | 353 | 9 | 359 | 7.15e-35 | 132 |
| Msa0252000 | AT3G45870.1 | 29.321 | 324 | 214 | 4 | 13 | 324 | 14 | 334 | 1.05e-34 | 132 |
| Msa0252000 | AT1G43650.2 | 31.984 | 247 | 156 | 4 | 13 | 257 | 9 | 245 | 7.29e-34 | 126 |
| Msa0252000 | AT5G45370.1 | 26.879 | 346 | 238 | 7 | 15 | 357 | 24 | 357 | 5.14e-33 | 126 |
| Msa0252000 | AT4G19185.1 | 27.795 | 331 | 220 | 4 | 15 | 329 | 25 | 352 | 7.18e-33 | 127 |
| Msa0252000 | AT4G01450.1 | 28.283 | 297 | 208 | 2 | 11 | 307 | 10 | 301 | 1.11e-32 | 125 |
| Msa0252000 | AT5G45370.2 | 25.967 | 362 | 245 | 7 | 15 | 357 | 24 | 381 | 1.63e-32 | 125 |
| Msa0252000 | AT5G45370.4 | 25.967 | 362 | 245 | 7 | 15 | 357 | 24 | 381 | 1.63e-32 | 125 |
| Msa0252000 | AT4G08290.2 | 34.426 | 244 | 153 | 4 | 6 | 245 | 8 | 248 | 2.33e-32 | 123 |
| Msa0252000 | AT2G37450.3 | 32.444 | 225 | 146 | 3 | 108 | 329 | 11 | 232 | 3.77e-32 | 122 |
| Msa0252000 | AT4G01440.4 | 29.084 | 251 | 169 | 4 | 11 | 257 | 10 | 255 | 4.21e-32 | 122 |
| Msa0252000 | AT3G28080.5 | 29.958 | 237 | 161 | 3 | 97 | 329 | 9 | 244 | 9.57e-32 | 121 |
| Msa0252000 | AT3G28080.7 | 29.958 | 237 | 161 | 3 | 97 | 329 | 9 | 244 | 9.57e-32 | 121 |
| Msa0252000 | AT3G28080.8 | 29.958 | 237 | 161 | 3 | 97 | 329 | 9 | 244 | 9.57e-32 | 121 |
| Msa0252000 | AT3G28080.6 | 29.958 | 237 | 161 | 3 | 97 | 329 | 9 | 244 | 9.57e-32 | 121 |
| Msa0252000 | AT3G28080.2 | 29.958 | 237 | 161 | 3 | 97 | 329 | 90 | 325 | 8.56e-31 | 120 |
| Msa0252000 | AT3G28080.1 | 29.958 | 237 | 161 | 3 | 97 | 329 | 98 | 333 | 8.62e-31 | 120 |
| Msa0252000 | AT3G28100.1 | 29.167 | 240 | 165 | 3 | 97 | 332 | 98 | 336 | 9.97e-30 | 117 |
| Msa0252000 | AT3G28130.5 | 28.270 | 237 | 165 | 3 | 97 | 329 | 11 | 246 | 1.24e-29 | 115 |
| Msa0252000 | AT3G28130.1 | 28.270 | 237 | 165 | 3 | 97 | 329 | 11 | 246 | 1.24e-29 | 115 |
| Msa0252000 | AT3G28070.2 | 29.020 | 255 | 173 | 4 | 97 | 344 | 9 | 262 | 1.85e-29 | 115 |
| Msa0252000 | AT4G01430.3 | 31.088 | 193 | 129 | 2 | 141 | 329 | 1 | 193 | 5.66e-29 | 112 |
| Msa0252000 | AT4G16620.1 | 26.331 | 357 | 239 | 8 | 19 | 369 | 20 | 358 | 6.31e-29 | 115 |
| Msa0252000 | AT3G45870.8 | 28.155 | 309 | 207 | 4 | 13 | 309 | 14 | 319 | 6.66e-29 | 114 |
| Msa0252000 | AT3G28130.2 | 28.667 | 300 | 205 | 6 | 35 | 329 | 37 | 332 | 6.68e-29 | 115 |
| Msa0252000 | AT3G28070.1 | 28.627 | 255 | 174 | 4 | 97 | 344 | 101 | 354 | 1.13e-28 | 115 |
| Msa0252000 | AT2G37450.1 | 31.429 | 210 | 138 | 3 | 123 | 329 | 59 | 265 | 4.53e-27 | 109 |
| Msa0252000 | AT4G19185.2 | 27.308 | 260 | 172 | 3 | 86 | 329 | 16 | 274 | 4.54e-27 | 109 |
| Msa0252000 | AT3G30340.2 | 28.958 | 259 | 180 | 2 | 1 | 257 | 1 | 257 | 6.03e-26 | 105 |
| Msa0252000 | AT4G24980.1 | 28.571 | 301 | 128 | 8 | 36 | 326 | 12 | 235 | 1.87e-25 | 104 |
| Msa0252000 | AT3G28080.9 | 29.327 | 208 | 142 | 3 | 126 | 329 | 1 | 207 | 3.24e-25 | 102 |
| Msa0252000 | AT4G01450.4 | 27.468 | 233 | 164 | 2 | 11 | 243 | 10 | 237 | 2.27e-24 | 100 |
| Msa0252000 | AT3G28130.3 | 27.885 | 208 | 145 | 3 | 126 | 329 | 1 | 207 | 1.19e-23 | 98.2 |
| Msa0252000 | AT3G28070.5 | 28.319 | 226 | 154 | 4 | 126 | 344 | 1 | 225 | 3.80e-23 | 97.1 |
| Msa0252000 | AT5G45370.6 | 24.286 | 280 | 191 | 6 | 97 | 357 | 2 | 279 | 2.47e-22 | 95.9 |
| Msa0252000 | AT5G45370.5 | 24.286 | 280 | 191 | 6 | 97 | 357 | 2 | 279 | 2.47e-22 | 95.9 |
| Msa0252000 | AT4G16620.4 | 27.007 | 274 | 177 | 7 | 102 | 369 | 5 | 261 | 4.29e-22 | 94.7 |
| Msa0252000 | AT4G16620.2 | 27.007 | 274 | 177 | 7 | 102 | 369 | 5 | 261 | 4.29e-22 | 94.7 |
| Msa0252000 | AT3G45870.9 | 28.627 | 255 | 167 | 4 | 15 | 257 | 16 | 267 | 1.18e-21 | 94.0 |
| Msa0252000 | AT3G28080.4 | 26.695 | 236 | 116 | 5 | 97 | 329 | 9 | 190 | 6.70e-21 | 90.5 |
| Msa0252000 | AT4G01450.3 | 27.723 | 202 | 141 | 2 | 11 | 212 | 10 | 206 | 9.64e-21 | 90.5 |
| Msa0252000 | AT3G45870.5 | 28.571 | 210 | 137 | 3 | 127 | 324 | 51 | 259 | 3.14e-20 | 90.5 |
| Msa0252000 | AT3G28070.3 | 27.442 | 215 | 151 | 3 | 97 | 307 | 101 | 314 | 4.14e-20 | 90.1 |
| Msa0252000 | AT3G28080.3 | 26.695 | 236 | 116 | 5 | 97 | 329 | 98 | 279 | 4.36e-20 | 90.1 |
| Msa0252000 | AT5G45370.3 | 25.455 | 220 | 145 | 5 | 127 | 329 | 74 | 291 | 1.58e-17 | 82.8 |
| Msa0252000 | AT3G45870.2 | 29.371 | 143 | 100 | 1 | 182 | 324 | 42 | 183 | 5.23e-16 | 77.0 |
| Msa0252000 | AT4G16620.3 | 27.700 | 213 | 148 | 3 | 19 | 229 | 20 | 228 | 2.68e-15 | 75.9 |
| Msa0252000 | AT3G45870.6 | 26.667 | 195 | 130 | 3 | 127 | 309 | 51 | 244 | 9.50e-15 | 73.9 |
| Msa0252000 | AT3G45870.7 | 26.667 | 195 | 130 | 3 | 127 | 309 | 51 | 244 | 9.50e-15 | 73.9 |
| Msa0252000 | AT3G28100.3 | 28.082 | 146 | 102 | 1 | 97 | 239 | 98 | 243 | 3.32e-12 | 66.6 |
| Msa0252000 | AT3G28100.2 | 30.612 | 147 | 95 | 3 | 97 | 240 | 98 | 240 | 4.22e-12 | 66.2 |
| Msa0252000 | AT3G28130.4 | 27.751 | 209 | 144 | 4 | 35 | 239 | 37 | 242 | 5.00e-11 | 63.2 |
Find 72 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCCATTCCTTAAATTTA+AGG | 0.088662 | 2_2:-42496953 | Msa0252000:CDS |
| TATAATTGTTCCTACTATTT+TGG | 0.131804 | 2_2:+42493229 | None:intergenic |
| GTCGCATTAACGATAGATTT+TGG | 0.156266 | 2_2:+42490921 | None:intergenic |
| ATCAATAACATAACCATTAT+TGG | 0.212794 | 2_2:+42497252 | None:intergenic |
| TTGGCTTGTATATTGTTCTT+TGG | 0.213618 | 2_2:-42490986 | Msa0252000:CDS |
| CCAATTCTCATCACTTTCTA+AGG | 0.214202 | 2_2:+42493115 | None:intergenic |
| TTCAGCCTGGATGTGTTTAA+TGG | 0.218396 | 2_2:-42491504 | Msa0252000:CDS |
| TGGCTTGTATATTGTTCTTT+GGG | 0.218460 | 2_2:-42490985 | Msa0252000:CDS |
| GCTCCTGTTGCTTATATATC+AGG | 0.221252 | 2_2:-42497120 | Msa0252000:CDS |
| ATTACTTCTCTACTTCAATT+TGG | 0.238192 | 2_2:-42491422 | Msa0252000:CDS |
| AAGTAATCTTCCACGCATTT+AGG | 0.248840 | 2_2:+42491438 | None:intergenic |
| TGGATCAAAATTTACTATCT+TGG | 0.252221 | 2_2:-42493458 | Msa0252000:CDS |
| GGATCAAAATTTACTATCTT+GGG | 0.264711 | 2_2:-42493457 | Msa0252000:CDS |
| GCTGAAAGAGATAACGTATT+TGG | 0.278496 | 2_2:+42491521 | None:intergenic |
| CTTTGTGCATTTAGCAGCTT+TGG | 0.284498 | 2_2:+42493167 | None:intergenic |
| TTGTACATAACATAGCAAAA+TGG | 0.304082 | 2_2:-42497301 | None:intergenic |
| GAATAAAATGAATGTCAAAT+TGG | 0.307457 | 2_2:-42490788 | Msa0252000:three_prime_UTR |
| TTGATACAGTTAATATATTC+AGG | 0.313306 | 2_2:-42497234 | Msa0252000:CDS |
| AACATACTGTAAAACTGATT+TGG | 0.334438 | 2_2:-42490865 | Msa0252000:CDS |
| TTCATGTTTGTTAGCTTGAT+AGG | 0.340542 | 2_2:-42491026 | Msa0252000:intron |
| TGGTACAAGAATTGTACTTT+TGG | 0.352311 | 2_2:-42497202 | Msa0252000:CDS |
| AAAATAGTAGGAACAATTAT+AGG | 0.366845 | 2_2:-42493227 | Msa0252000:CDS |
| GGAGTACTACTTACCAATAA+TGG | 0.390910 | 2_2:-42497265 | Msa0252000:CDS |
| TTCTTGAAATGCACCATGCT+TGG | 0.398695 | 2_2:+42491256 | None:intergenic |
| GTTGTGTTGCTTGGTCAGTT+TGG | 0.400865 | 2_2:-42493064 | Msa0252000:CDS |
| CCTTAGAAAGTGATGAGAAT+TGG | 0.401591 | 2_2:-42493115 | Msa0252000:CDS |
| ACTCCTTAAATTTAAGGAAT+GGG | 0.405929 | 2_2:+42496950 | None:intergenic |
| GTCACAATTAATGTGGAAAC+AGG | 0.417315 | 2_2:+42491204 | None:intergenic |
| ATCACTAGTGACACTATTCA+TGG | 0.421626 | 2_2:-42491468 | Msa0252000:CDS |
| TGTACATAACATAGCAAAAT+GGG | 0.427173 | 2_2:-42497300 | None:intergenic |
| GGTGCAATTGGAGTGATCAT+TGG | 0.431785 | 2_2:-42491005 | Msa0252000:CDS |
| TACCCTGATATATAAGCAAC+AGG | 0.435358 | 2_2:+42497117 | None:intergenic |
| TTTGGATGGCTTTCATATGC+TGG | 0.435509 | 2_2:+42491539 | None:intergenic |
| AACTCCTTAAATTTAAGGAA+TGG | 0.444592 | 2_2:+42496949 | None:intergenic |
| TATTCATCACCTCACTAGTT+GGG | 0.449453 | 2_2:-42496917 | Msa0252000:intron |
| GTTAGCTTGATAGGTGCAAT+TGG | 0.452484 | 2_2:-42491017 | Msa0252000:intron |
| ATATATTCAGGCTTGACTCT+TGG | 0.460117 | 2_2:-42497222 | Msa0252000:CDS |
| ATATTCATCACCTCACTAGT+TGG | 0.471178 | 2_2:-42496918 | Msa0252000:CDS |
| ATACCTTCAAAATCAATCAT+TGG | 0.478011 | 2_2:-42493143 | Msa0252000:CDS |
| CTCCTGTTGCTTATATATCA+GGG | 0.478165 | 2_2:-42497119 | Msa0252000:intron |
| AGAACTATAGCCAAAATAGT+AGG | 0.479863 | 2_2:-42493239 | Msa0252000:CDS |
| AGTGTTCATTGCACTATTGA+AGG | 0.486326 | 2_2:-42493192 | Msa0252000:CDS |
| GCACCATGCTTGGAGACATA+AGG | 0.505056 | 2_2:+42491266 | None:intergenic |
| TTGATTCATCAAGGTAAAAG+AGG | 0.507683 | 2_2:+42490837 | None:intergenic |
| AATGCTCAAAAGCTATATCA+AGG | 0.510238 | 2_2:+42490746 | None:intergenic |
| GGAACAATTATAGGTGTAAG+TGG | 0.510948 | 2_2:-42493218 | Msa0252000:CDS |
| TTTGGAGGGTTTGAGTCCAA+TGG | 0.519817 | 2_2:-42497184 | Msa0252000:CDS |
| AGTGATGAGAATTGGTTGCT+TGG | 0.523367 | 2_2:-42493107 | Msa0252000:CDS |
| GCTATTACAAATGTCACTGC+TGG | 0.523768 | 2_2:+42493384 | None:intergenic |
| ATACGTTATCTCTTTCAGCC+TGG | 0.532047 | 2_2:-42491517 | Msa0252000:CDS |
| CTTCATGAGGAAGTATACAT+TGG | 0.532240 | 2_2:-42491162 | Msa0252000:CDS |
| TTGTAATAGCAGCTTTCGTA+GGG | 0.537605 | 2_2:-42493371 | Msa0252000:intron |
| GATCAAAATTTACTATCTTG+GGG | 0.538033 | 2_2:-42493456 | Msa0252000:CDS |
| TTTGTAATAGCAGCTTTCGT+AGG | 0.540302 | 2_2:-42493372 | Msa0252000:CDS |
| GGCTTGTATATTGTTCTTTG+GGG | 0.540846 | 2_2:-42490984 | Msa0252000:CDS |
| CGATACACAACAAATACCAT+TGG | 0.545893 | 2_2:+42497168 | None:intergenic |
| AGTGTAATGTTGATTCATCA+AGG | 0.552417 | 2_2:+42490828 | None:intergenic |
| TGTTGCCATTAAACACATCC+AGG | 0.559268 | 2_2:+42491499 | None:intergenic |
| AAAGAGATAACGTATTTGGA+TGG | 0.564821 | 2_2:+42491525 | None:intergenic |
| TGTAGTTGATGTGAAAGAGA+AGG | 0.566151 | 2_2:-42490949 | Msa0252000:CDS |
| TAGCCTTATGTCTCCAAGCA+TGG | 0.568836 | 2_2:-42491269 | Msa0252000:CDS |
| ATGAGGAAGTATACATTGGA+AGG | 0.572334 | 2_2:-42491158 | Msa0252000:intron |
| GTGTTCATTGCACTATTGAA+GGG | 0.580147 | 2_2:-42493191 | Msa0252000:CDS |
| TCAAAAGCTATATCAAGGAA+AGG | 0.598644 | 2_2:+42490751 | None:intergenic |
| GCATGGTGCATTTCAAGAAG+AGG | 0.603429 | 2_2:-42491252 | Msa0252000:CDS |
| ATCTATCGTTAATGCGACAG+AGG | 0.605432 | 2_2:-42490916 | Msa0252000:CDS |
| CCTTAAATTTAAGGAATGGG+AGG | 0.605655 | 2_2:+42496953 | None:intergenic |
| TCTATCGTTAATGCGACAGA+GGG | 0.612510 | 2_2:-42490915 | Msa0252000:CDS |
| GTAAACATAGCAGAGAAGAG+AGG | 0.639250 | 2_2:+42491228 | None:intergenic |
| TAATACAGTCACAATTAATG+TGG | 0.644717 | 2_2:+42491197 | None:intergenic |
| CAAAATGGGAAATTTCAACA+TGG | 0.646787 | 2_2:-42497286 | Msa0252000:exon |
| TGGAAGCAGACCTAAATGCG+TGG | 0.661518 | 2_2:-42491448 | Msa0252000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGTTTTTCATATTTTAAT+TGG | + | chr2_2:42491826-42491845 | None:intergenic | 10.0% |
| !!! | AAAAATTCTAATCTTTTTAT+TGG | - | chr2_2:42492772-42492791 | Msa0252000:intron | 10.0% |
| !!! | AAAATTCTAATCTTTTTATT+GGG | - | chr2_2:42492773-42492792 | Msa0252000:intron | 10.0% |
| !!! | AAAAATGCAATTATTTTTTA+AGG | - | chr2_2:42493066-42493085 | Msa0252000:CDS | 10.0% |
| !! | AAAAAAAAGAAAAATAGATA+TGG | + | chr2_2:42493177-42493196 | None:intergenic | 10.0% |
| !!! | ATTTTATAAGACAAAATTTA+TGG | - | chr2_2:42493342-42493361 | Msa0252000:intron | 10.0% |
| !!! | TTTTTATTTTTATTTTTGAG+AGG | + | chr2_2:42494397-42494416 | None:intergenic | 10.0% |
| !!! | GTTAATATTCTTTTTTTTTT+TGG | + | chr2_2:42495372-42495391 | None:intergenic | 10.0% |
| !! | AAATATTATTTGATTATAAG+AGG | + | chr2_2:42496134-42496153 | None:intergenic | 10.0% |
| !! | TATAAGAGAAAAAATAAGAA+GGG | + | chr2_2:42491150-42491169 | None:intergenic | 15.0% |
| !! | TTATAAGAGAAAAAATAAGA+AGG | + | chr2_2:42491151-42491170 | None:intergenic | 15.0% |
| !! | AAAAGATACAAAAAGAAAAA+GGG | - | chr2_2:42491216-42491235 | Msa0252000:CDS | 15.0% |
| !!! | CCATATTTTTTTATAAAGAA+AGG | + | chr2_2:42491491-42491510 | None:intergenic | 15.0% |
| !! | CCTTTCTTTATAAAAAAATA+TGG | - | chr2_2:42491488-42491507 | Msa0252000:CDS | 15.0% |
| !! | AAATAGTCAAAGAAAATAAT+AGG | + | chr2_2:42491713-42491732 | None:intergenic | 15.0% |
| !! | ATGCGAAATAAAATAAAAAA+TGG | + | chr2_2:42491888-42491907 | None:intergenic | 15.0% |
| !! | GAACCAAAAAAAAATAATTA+GGG | + | chr2_2:42491928-42491947 | None:intergenic | 15.0% |
| !!! | AAAGAGTTTGTAATTTTTTT+TGG | + | chr2_2:42492090-42492109 | None:intergenic | 15.0% |
| !!! | AAAATGAGTTTATTTCTATA+AGG | + | chr2_2:42492416-42492435 | None:intergenic | 15.0% |
| !!! | TTTAACCTTTTTTTTTCTTT+GGG | + | chr2_2:42492492-42492511 | None:intergenic | 15.0% |
| !!! | ATTTAACCTTTTTTTTTCTT+TGG | + | chr2_2:42492493-42492512 | None:intergenic | 15.0% |
| !!! | AATTGAAGATTTTTTTTTAG+AGG | - | chr2_2:42492921-42492940 | Msa0252000:intron | 15.0% |
| !!! | AAATGAGTTAAATATGTTTT+TGG | + | chr2_2:42492969-42492988 | None:intergenic | 15.0% |
| !! | TTTATATAACATGTATAACT+AGG | + | chr2_2:42493285-42493304 | None:intergenic | 15.0% |
| !!! | TTTTTGCTTATAAAAAAAGA+CGG | + | chr2_2:42493543-42493562 | None:intergenic | 15.0% |
| !!! | ACATGCATTTAATTTTATAT+TGG | - | chr2_2:42493718-42493737 | Msa0252000:intron | 15.0% |
| !!! | GATTTTTTTGCTTATATTTT+AGG | - | chr2_2:42493822-42493841 | Msa0252000:intron | 15.0% |
| !!! | AAAAAAAAGTAGTTTTACAT+TGG | + | chr2_2:42493984-42494003 | None:intergenic | 15.0% |
| !!! | ATTTTTTGTCTTATATATAG+TGG | + | chr2_2:42494208-42494227 | None:intergenic | 15.0% |
| !!! | ATTGAATATATTTTACAGAA+TGG | - | chr2_2:42494691-42494710 | Msa0252000:intron | 15.0% |
| !!! | TATTTTAATCGTTCATTTTT+TGG | - | chr2_2:42494992-42495011 | Msa0252000:intron | 15.0% |
| !! | AATACAATATATATAAGTGT+AGG | - | chr2_2:42495066-42495085 | Msa0252000:intron | 15.0% |
| !!! | ACCAAATTTTTTTAAAATTC+AGG | - | chr2_2:42495115-42495134 | Msa0252000:intron | 15.0% |
| !!! | TCCTGAATTTTAAAAAAATT+TGG | + | chr2_2:42495119-42495138 | None:intergenic | 15.0% |
| !!! | TTTTAAAATTCAGGATATAT+AGG | - | chr2_2:42495124-42495143 | Msa0252000:intron | 15.0% |
| !!! | AAACAAATTTTGTTTAATGT+TGG | - | chr2_2:42495415-42495434 | Msa0252000:intron | 15.0% |
| !!! | AAATCTTGAATTTTATGATA+GGG | - | chr2_2:42496352-42496371 | Msa0252000:intron | 15.0% |
| !! | ATTTGATAAAATTCATGTTA+AGG | - | chr2_2:42496380-42496399 | Msa0252000:intron | 15.0% |
| !!! | TAAGAATAAATACATTTTGT+AGG | - | chr2_2:42496666-42496685 | Msa0252000:intron | 15.0% |
| !!! | AAGAATAAATACATTTTGTA+GGG | - | chr2_2:42496667-42496686 | Msa0252000:intron | 15.0% |
| !! | TTTAGTTAGATTAATATCAT+TGG | + | chr2_2:42496918-42496937 | None:intergenic | 15.0% |
| !! | ATCAATAACATAACCATTAT+TGG | + | chr2_2:42490727-42490746 | None:intergenic | 20.0% |
| !! | TTGATACAGTTAATATATTC+AGG | - | chr2_2:42490742-42490761 | Msa0252000:three_prime_UTR | 20.0% |
| !! | AGAAAAACTCCTTAAATTTA+AGG | + | chr2_2:42491035-42491054 | None:intergenic | 20.0% |
| !!! | TAAATTTAAGGAGTTTTTCT+TGG | - | chr2_2:42491035-42491054 | Msa0252000:intron | 20.0% |
| !!! | TTTCTTTTTGTATCTTTTGT+GGG | + | chr2_2:42491214-42491233 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTGTATCTTTTG+TGG | + | chr2_2:42491215-42491234 | None:intergenic | 20.0% |
| !! | CAAAAGATACAAAAAGAAAA+AGG | - | chr2_2:42491215-42491234 | Msa0252000:CDS | 20.0% |
| !! | AAAAGAAAAAGGGATAAAAA+TGG | - | chr2_2:42491226-42491245 | Msa0252000:CDS | 20.0% |
| !! | AAAGAAAAAGGGATAAAAAT+GGG | - | chr2_2:42491227-42491246 | Msa0252000:CDS | 20.0% |
| !! | GGAACCAAAAAAAAATAATT+AGG | + | chr2_2:42491929-42491948 | None:intergenic | 20.0% |
| !!! | AAGTTTTTCATCTTCATTTT+TGG | + | chr2_2:42492888-42492907 | None:intergenic | 20.0% |
| !! | ATATTATATATTTCTCTGAG+TGG | - | chr2_2:42493033-42493052 | Msa0252000:intron | 20.0% |
| !! | TATTATATATTTCTCTGAGT+GGG | - | chr2_2:42493034-42493053 | Msa0252000:intron | 20.0% |
| !!! | TCCTTGTTGTAATTTTTTTA+CGG | - | chr2_2:42493214-42493233 | Msa0252000:CDS | 20.0% |
| !!! | TCCTTGTTGTAATTTTTTTT+AGG | - | chr2_2:42493255-42493274 | Msa0252000:CDS | 20.0% |
| !!! | CCTTGTTGTAATTTTTTTTA+GGG | - | chr2_2:42493256-42493275 | Msa0252000:CDS | 20.0% |
| !!! | CTTGTTGTAATTTTTTTTAG+GGG | - | chr2_2:42493257-42493276 | Msa0252000:CDS | 20.0% |
| !! | TAATTGCATTTATAAGTACA+TGG | - | chr2_2:42493316-42493335 | Msa0252000:intron | 20.0% |
| !!! | TAATTAAAAGTGTTTTCAAG+AGG | + | chr2_2:42493432-42493451 | None:intergenic | 20.0% |
| !! | ATTTAAACTAAAATGTGTGT+TGG | - | chr2_2:42493477-42493496 | Msa0252000:intron | 20.0% |
| !! | GATGTAAAAATAATTCTCAT+TGG | - | chr2_2:42493651-42493670 | Msa0252000:intron | 20.0% |
| !!! | TTCTCATTGGTTAAAAATTA+TGG | - | chr2_2:42493664-42493683 | Msa0252000:intron | 20.0% |
| !! | CACAATAATAACATAAAAGT+TGG | - | chr2_2:42493764-42493783 | Msa0252000:intron | 20.0% |
| !!! | TTTTTGCTTATATTTTAGGA+CGG | - | chr2_2:42493826-42493845 | Msa0252000:intron | 20.0% |
| !!! | TAGTTTTACTAATCAAACAA+GGG | + | chr2_2:42494047-42494066 | None:intergenic | 20.0% |
| !!! | ATAGTTTTACTAATCAAACA+AGG | + | chr2_2:42494048-42494067 | None:intergenic | 20.0% |
| !!! | TATATATAGTGGATTTTTTG+TGG | + | chr2_2:42494197-42494216 | None:intergenic | 20.0% |
| !!! | TATAATTGTTCCTACTATTT+TGG | + | chr2_2:42494750-42494769 | None:intergenic | 20.0% |
| !! | AAAATAGTAGGAACAATTAT+AGG | - | chr2_2:42494749-42494768 | Msa0252000:intron | 20.0% |
| !! | AATGAACGATTAAAATATGT+AGG | + | chr2_2:42494989-42495008 | None:intergenic | 20.0% |
| !!! | TATTTATTCTAGAAAAGATG+AGG | + | chr2_2:42495808-42495827 | None:intergenic | 20.0% |
| !!! | TCTAGAATAAATATATGTTG+TGG | - | chr2_2:42495815-42495834 | Msa0252000:intron | 20.0% |
| !!! | AACTTTAAGACATTTAGTTT+AGG | + | chr2_2:42496040-42496059 | None:intergenic | 20.0% |
| !!! | AACTAAATGTCTTAAAGTTT+TGG | - | chr2_2:42496041-42496060 | Msa0252000:intron | 20.0% |
| !!! | ACTAAATGTCTTAAAGTTTT+GGG | - | chr2_2:42496042-42496061 | Msa0252000:intron | 20.0% |
| !!! | TAATGAATTCCAATTTTTCA+TGG | - | chr2_2:42496224-42496243 | Msa0252000:intron | 20.0% |
| !!! | AATGAATTCCAATTTTTCAT+GGG | - | chr2_2:42496225-42496244 | Msa0252000:intron | 20.0% |
| !!! | AAATTCAAGATTTGTTAGAT+TGG | + | chr2_2:42496345-42496364 | None:intergenic | 20.0% |
| !!! | CAAATCTTGAATTTTATGAT+AGG | - | chr2_2:42496351-42496370 | Msa0252000:intron | 20.0% |
| !! | CAAGTATTTATATATCATCA+TGG | + | chr2_2:42496612-42496631 | None:intergenic | 20.0% |
| !! | ATAAATTGATACATCTTCAA+TGG | - | chr2_2:42496637-42496656 | Msa0252000:intron | 20.0% |
| !! | CTTAACACAATTTGAATTAT+AGG | - | chr2_2:42496883-42496902 | Msa0252000:intron | 20.0% |
| !!! | TGTTTTTTCACAATATTCAT+TGG | + | chr2_2:42497095-42497114 | None:intergenic | 20.0% |
| !! | GAATAAAATGAATGTCAAAT+TGG | - | chr2_2:42497188-42497207 | Msa0252000:CDS | 20.0% |
| ! | TTGATACACTTTAGATAAGA+GGG | + | chr2_2:42490946-42490965 | None:intergenic | 25.0% |
| ! | ATTGATACACTTTAGATAAG+AGG | + | chr2_2:42490947-42490966 | None:intergenic | 25.0% |
| ! | ACTCCTTAAATTTAAGGAAT+GGG | + | chr2_2:42491029-42491048 | None:intergenic | 25.0% |
| ! | AACTCCTTAAATTTAAGGAA+TGG | + | chr2_2:42491030-42491049 | None:intergenic | 25.0% |
| ! | AAGAAAAAGGGATAAAAATG+GGG | - | chr2_2:42491228-42491247 | Msa0252000:CDS | 25.0% |
| ! | AAAAATGGGGTATGAAATAT+TGG | - | chr2_2:42491241-42491260 | Msa0252000:CDS | 25.0% |
| ! | ATATCTTCCAACTTAATTAG+AGG | - | chr2_2:42491354-42491373 | Msa0252000:intron | 25.0% |
| ! | TCATACTACTTACATTATTG+TGG | - | chr2_2:42491771-42491790 | Msa0252000:intron | 25.0% |
| ! | CCAAAAAAAAATAATTAGGG+TGG | + | chr2_2:42491925-42491944 | None:intergenic | 25.0% |
| !!! | CCACCCTAATTATTTTTTTT+TGG | - | chr2_2:42491922-42491941 | Msa0252000:intron | 25.0% |
| ! | GTTGAGTGTATAAATATGTT+TGG | + | chr2_2:42492040-42492059 | None:intergenic | 25.0% |
| ! | TATAAGGAAATTTCTTTCCT+GGG | + | chr2_2:42492400-42492419 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTTGGGCTAAAAT+CGG | + | chr2_2:42492482-42492501 | None:intergenic | 25.0% |
| ! | TTTAGCCCAAAGAAAAAAAA+AGG | - | chr2_2:42492484-42492503 | Msa0252000:intron | 25.0% |
| ! | TTATAGAGATTAAAAGTCGA+AGG | + | chr2_2:42492572-42492591 | None:intergenic | 25.0% |
| ! | CTTGAATTGACTACTTAAAT+AGG | + | chr2_2:42492619-42492638 | None:intergenic | 25.0% |
| !! | ATGAAGATGAAAAACTTTTG+AGG | - | chr2_2:42492891-42492910 | Msa0252000:intron | 25.0% |
| !! | TGAAGATGAAAAACTTTTGA+GGG | - | chr2_2:42492892-42492911 | Msa0252000:intron | 25.0% |
| !!! | CCTTGTTGTAATTTTTTTAC+GGG | - | chr2_2:42493215-42493234 | Msa0252000:CDS | 25.0% |
| ! | CCCTAAAAAAAATTACAACA+AGG | + | chr2_2:42493259-42493278 | None:intergenic | 25.0% |
| ! | TAAGACAAAATTTATGGTTC+TGG | - | chr2_2:42493348-42493367 | Msa0252000:intron | 25.0% |
| !!! | ATAATTTTTTGTGTTCTCCT+TGG | - | chr2_2:42493611-42493630 | Msa0252000:intron | 25.0% |
| !!! | GTTTTGGTATTTCATACAAT+TGG | + | chr2_2:42494164-42494183 | None:intergenic | 25.0% |
| !!! | AGATAGTAAATTTTGATCCA+AGG | + | chr2_2:42494518-42494537 | None:intergenic | 25.0% |
| ! | TGGATCAAAATTTACTATCT+TGG | - | chr2_2:42494518-42494537 | Msa0252000:intron | 25.0% |
| ! | GGATCAAAATTTACTATCTT+GGG | - | chr2_2:42494519-42494538 | Msa0252000:intron | 25.0% |
| ! | GATCAAAATTTACTATCTTG+GGG | - | chr2_2:42494520-42494539 | Msa0252000:intron | 25.0% |
| ! | ATACCTTCAAAATCAATCAT+TGG | - | chr2_2:42494833-42494852 | Msa0252000:intron | 25.0% |
| ! | GATATGAATTAGCTATTCAT+TGG | + | chr2_2:42495037-42495056 | None:intergenic | 25.0% |
| !! | TGAGTCTTTTCTCTTTTTTT+CGG | - | chr2_2:42495443-42495462 | Msa0252000:intron | 25.0% |
| !! | TGAGTCTTTTCTCTTTTTTT+TGG | - | chr2_2:42495443-42495462 | Msa0252000:intron | 25.0% |
| !!! | TGAGTCTTTTCTCATTTTTT+TGG | - | chr2_2:42495536-42495555 | Msa0252000:intron | 25.0% |
| !!! | TGTATGTTTTTTGTGTATGA+TGG | + | chr2_2:42495686-42495705 | None:intergenic | 25.0% |
| ! | TAGAAAAGATGAGGTAAAAA+AGG | + | chr2_2:42495799-42495818 | None:intergenic | 25.0% |
| ! | AAATATAAGCGGGTAATTAT+GGG | + | chr2_2:42496166-42496185 | None:intergenic | 25.0% |
| ! | AGATACTTCACAAATATAAG+CGG | + | chr2_2:42496177-42496196 | None:intergenic | 25.0% |
| !! | TATCGAAAACTGATATTTTG+CGG | + | chr2_2:42496268-42496287 | None:intergenic | 25.0% |
| !!! | GTCTCTATTTTTTAGGATAT+GGG | - | chr2_2:42496309-42496328 | Msa0252000:intron | 25.0% |
| ! | ATTACTTCTCTACTTCAATT+TGG | - | chr2_2:42496554-42496573 | Msa0252000:intron | 25.0% |
| !! | TGCATTTTATATTCAGTATG+TGG | - | chr2_2:42496578-42496597 | Msa0252000:intron | 25.0% |
| ! | TAATACAGTCACAATTAATG+TGG | + | chr2_2:42496782-42496801 | None:intergenic | 25.0% |
| ! | AACATACTGTAAAACTGATT+TGG | - | chr2_2:42497111-42497130 | Msa0252000:intron | 25.0% |
| CAAAATGGGAAATTTCAACA+TGG | - | chr2_2:42490690-42490709 | Msa0252000:three_prime_UTR | 30.0% | |
| ! | TGGTACAAGAATTGTACTTT+TGG | - | chr2_2:42490774-42490793 | Msa0252000:three_prime_UTR | 30.0% |
| ! | TACAAGAATTGTACTTTTGG+AGG | - | chr2_2:42490777-42490796 | Msa0252000:three_prime_UTR | 30.0% |
| ! | ACAAGAATTGTACTTTTGGA+GGG | - | chr2_2:42490778-42490797 | Msa0252000:three_prime_UTR | 30.0% |
| AGGGATGGATATAATAATTG+AGG | + | chr2_2:42490927-42490946 | None:intergenic | 30.0% | |
| ! | CTTTTTGACAGAAGAAATTC+TGG | - | chr2_2:42490998-42491017 | Msa0252000:CDS | 30.0% |
| !!! | AATTTTATTAAGGGAGCACT+AGG | - | chr2_2:42491178-42491197 | Msa0252000:CDS | 30.0% |
| ! | TTTTGTATCTTTTGTGGGTT+TGG | + | chr2_2:42491209-42491228 | None:intergenic | 30.0% |
| CCATAAACCTCTAATTAAGT+TGG | + | chr2_2:42491364-42491383 | None:intergenic | 30.0% | |
| CCAACTTAATTAGAGGTTTA+TGG | - | chr2_2:42491361-42491380 | Msa0252000:intron | 30.0% | |
| !! | CAATAATGAAGCATTGAATG+TGG | - | chr2_2:42491613-42491632 | Msa0252000:intron | 30.0% |
| GGATACTCTTCATAAGATAA+GGG | + | chr2_2:42491646-42491665 | None:intergenic | 30.0% | |
| AGGATACTCTTCATAAGATA+AGG | + | chr2_2:42491647-42491666 | None:intergenic | 30.0% | |
| !! | TCTTATGAAGAGTATCCTAT+TGG | - | chr2_2:42491649-42491668 | Msa0252000:intron | 30.0% |
| !! | CTTATGAAGAGTATCCTATT+GGG | - | chr2_2:42491650-42491669 | Msa0252000:intron | 30.0% |
| !! | TGGAGTATGTTTTTGTTTGA+CGG | - | chr2_2:42491791-42491810 | Msa0252000:intron | 30.0% |
| AAGAATTGCAATGTAGGAAA+TGG | + | chr2_2:42492160-42492179 | None:intergenic | 30.0% | |
| AATTTAACATGGTACAGAGT+CGG | + | chr2_2:42492186-42492205 | None:intergenic | 30.0% | |
| ACTCTGTACCATGTTAAATT+GGG | - | chr2_2:42492186-42492205 | Msa0252000:intron | 30.0% | |
| ! | TATCTATTGAGCCAACTTTT+GGG | + | chr2_2:42492224-42492243 | None:intergenic | 30.0% |
| ! | TTATCTATTGAGCCAACTTT+TGG | + | chr2_2:42492225-42492244 | None:intergenic | 30.0% |
| ! | AAAAGTTGGCTCAATAGATA+AGG | - | chr2_2:42492224-42492243 | Msa0252000:intron | 30.0% |
| ! | AAAGTTGGCTCAATAGATAA+GGG | - | chr2_2:42492225-42492244 | Msa0252000:intron | 30.0% |
| TGTTGAGTGTAAATGTGTTT+GGG | + | chr2_2:42492253-42492272 | None:intergenic | 30.0% | |
| TTGTTGAGTGTAAATGTGTT+TGG | + | chr2_2:42492254-42492273 | None:intergenic | 30.0% | |
| TTTGTAGTGTGACATTTCTT+AGG | + | chr2_2:42492285-42492304 | None:intergenic | 30.0% | |
| ATGGTTTATTTGGAGAAAAG+GGG | + | chr2_2:42492376-42492395 | None:intergenic | 30.0% | |
| GATGGTTTATTTGGAGAAAA+GGG | + | chr2_2:42492377-42492396 | None:intergenic | 30.0% | |
| ATAAGGAAATTTCTTTCCTG+GGG | + | chr2_2:42492399-42492418 | None:intergenic | 30.0% | |
| CTATAAGGAAATTTCTTTCC+TGG | + | chr2_2:42492401-42492420 | None:intergenic | 30.0% | |
| ! | AGTCGAAGGAAAATTTTAGA+GGG | + | chr2_2:42492558-42492577 | None:intergenic | 30.0% |
| ! | AAGTCGAAGGAAAATTTTAG+AGG | + | chr2_2:42492559-42492578 | None:intergenic | 30.0% |
| ACTTAAATAGGAACCAAAAG+CGG | + | chr2_2:42492607-42492626 | None:intergenic | 30.0% | |
| ATTACAACAAGGAGTAGATA+TGG | + | chr2_2:42493207-42493226 | None:intergenic | 30.0% | |
| CCCGTAAAAAAATTACAACA+AGG | + | chr2_2:42493218-42493237 | None:intergenic | 30.0% | |
| !! | TATTGGTTTACAAAAGAAGC+TGG | + | chr2_2:42493393-42493412 | None:intergenic | 30.0% |
| ! | TTTTGTAAACCAATAGAAGC+AGG | - | chr2_2:42493398-42493417 | Msa0252000:CDS | 30.0% |
| TGCTTATAAAAAAAGACGGA+GGG | + | chr2_2:42493539-42493558 | None:intergenic | 30.0% | |
| TTGCTTATAAAAAAAGACGG+AGG | + | chr2_2:42493540-42493559 | None:intergenic | 30.0% | |
| AACCAATACTTAGTGATTTG+AGG | - | chr2_2:42493587-42493606 | Msa0252000:intron | 30.0% | |
| TACCTCAAATCACTAAGTAT+TGG | + | chr2_2:42493592-42493611 | None:intergenic | 30.0% | |
| TTTCCATGAAACTTATTCCA+AGG | + | chr2_2:42493631-42493650 | None:intergenic | 30.0% | |
| GACTTTAATGACACATGTTA+AGG | - | chr2_2:42493888-42493907 | Msa0252000:intron | 30.0% | |
| TTCCTTAACATGTGTCTTTA+GGG | - | chr2_2:42494006-42494025 | Msa0252000:intron | 30.0% | |
| AGTAAAACTATTTCAGAGAC+AGG | - | chr2_2:42494057-42494076 | Msa0252000:intron | 30.0% | |
| !!! | ACATGACAATTTTTTCTGTG+AGG | + | chr2_2:42494263-42494282 | None:intergenic | 30.0% |
| ACACGGAACAATACAATATA+AGG | + | chr2_2:42494295-42494314 | None:intergenic | 30.0% | |
| AGAACTATAGCCAAAATAGT+AGG | - | chr2_2:42494737-42494756 | Msa0252000:intron | 30.0% | |
| !! | CTTGGATGTTTTGTTCTTTT+CGG | - | chr2_2:42494887-42494906 | Msa0252000:intron | 30.0% |
| GAATAGCTAATTCATATCAG+AGG | - | chr2_2:42495039-42495058 | Msa0252000:intron | 30.0% | |
| TGTGATACAATAAGGATACA+CGG | - | chr2_2:42495089-42495108 | Msa0252000:intron | 30.0% | |
| !!! | TCTTTTCTCTTTTTTTCGGT+TGG | - | chr2_2:42495447-42495466 | Msa0252000:intron | 30.0% |
| ! | TCACTTTAAAGGTGAATAAG+TGG | - | chr2_2:42495583-42495602 | Msa0252000:intron | 30.0% |
| ! | CACTTTAAAGGTGAATAAGT+GGG | - | chr2_2:42495584-42495603 | Msa0252000:intron | 30.0% |
| ACATGGATGTAAGAAATTAG+TGG | + | chr2_2:42495771-42495790 | None:intergenic | 30.0% | |
| TGGGAATGAACAAAAACAAA+TGG | - | chr2_2:42496000-42496019 | Msa0252000:intron | 30.0% | |
| GGGAATGAACAAAAACAAAT+GGG | - | chr2_2:42496001-42496020 | Msa0252000:intron | 30.0% | |
| !!! | TAAAGTTTTGGGTTAAGATG+TGG | - | chr2_2:42496053-42496072 | Msa0252000:intron | 30.0% |
| CTCAAATGATCATCCATATT+GGG | + | chr2_2:42496109-42496128 | None:intergenic | 30.0% | |
| CAAATATAAGCGGGTAATTA+TGG | + | chr2_2:42496167-42496186 | None:intergenic | 30.0% | |
| GATACTTCACAAATATAAGC+GGG | + | chr2_2:42496176-42496195 | None:intergenic | 30.0% | |
| AGTAAGTACCCATGAAAAAT+TGG | + | chr2_2:42496236-42496255 | None:intergenic | 30.0% | |
| AAATAGAGACGTATCTGTTT+CGG | + | chr2_2:42496299-42496318 | None:intergenic | 30.0% | |
| !!! | CAGATACGTCTCTATTTTTT+AGG | - | chr2_2:42496302-42496321 | Msa0252000:intron | 30.0% |
| !!! | CGTCTCTATTTTTTAGGATA+TGG | - | chr2_2:42496308-42496327 | Msa0252000:intron | 30.0% |
| GAGTAAGATGTAAAGGATTA+AGG | + | chr2_2:42496412-42496431 | None:intergenic | 30.0% | |
| TAATCCTTTACATCTTACTC+AGG | - | chr2_2:42496412-42496431 | Msa0252000:intron | 30.0% | |
| AAAGAGATAACGTATTTGGA+TGG | + | chr2_2:42496454-42496473 | None:intergenic | 30.0% | |
| !! | ATACATTTTGTAGGGTGTTA+TGG | - | chr2_2:42496675-42496694 | Msa0252000:intron | 30.0% |
| !! | TACATTTTGTAGGGTGTTAT+GGG | - | chr2_2:42496676-42496695 | Msa0252000:intron | 30.0% |
| ! | TTCATGTTTGTTAGCTTGAT+AGG | - | chr2_2:42496950-42496969 | Msa0252000:CDS | 30.0% |
| !! | TTGGCTTGTATATTGTTCTT+TGG | - | chr2_2:42496990-42497009 | Msa0252000:intron | 30.0% |
| ! | TGGCTTGTATATTGTTCTTT+GGG | - | chr2_2:42496991-42497010 | Msa0252000:intron | 30.0% |
| TTGATTCATCAAGGTAAAAG+AGG | + | chr2_2:42497142-42497161 | None:intergenic | 30.0% | |
| !! | AGTGTAATGTTGATTCATCA+AGG | + | chr2_2:42497151-42497170 | None:intergenic | 30.0% |
| TCAAAAGCTATATCAAGGAA+AGG | + | chr2_2:42497228-42497247 | None:intergenic | 30.0% | |
| AATGCTCAAAAGCTATATCA+AGG | + | chr2_2:42497233-42497252 | None:intergenic | 30.0% | |
| ! | GGAGTACTACTTACCAATAA+TGG | - | chr2_2:42490711-42490730 | Msa0252000:three_prime_UTR | 35.0% |
| ATATATTCAGGCTTGACTCT+TGG | - | chr2_2:42490754-42490773 | Msa0252000:three_prime_UTR | 35.0% | |
| CGATACACAACAAATACCAT+TGG | + | chr2_2:42490811-42490830 | None:intergenic | 35.0% | |
| ! | CTCCTGTTGCTTATATATCA+GGG | - | chr2_2:42490857-42490876 | Msa0252000:CDS | 35.0% |
| TACCCTGATATATAAGCAAC+AGG | + | chr2_2:42490862-42490881 | None:intergenic | 35.0% | |
| TACACTTTAGATAAGAGGGA+TGG | + | chr2_2:42490942-42490961 | None:intergenic | 35.0% | |
| CCTTAAATTTAAGGAATGGG+AGG | + | chr2_2:42491026-42491045 | None:intergenic | 35.0% | |
| CCTCCCATTCCTTAAATTTA+AGG | - | chr2_2:42491023-42491042 | Msa0252000:intron | 35.0% | |
| ATATTCATCACCTCACTAGT+TGG | - | chr2_2:42491058-42491077 | Msa0252000:intron | 35.0% | |
| TATTCATCACCTCACTAGTT+GGG | - | chr2_2:42491059-42491078 | Msa0252000:intron | 35.0% | |
| AAAAACAAACCCAACTAGTG+AGG | + | chr2_2:42491071-42491090 | None:intergenic | 35.0% | |
| GAAAGAGAGAAATGTCAACA+TGG | + | chr2_2:42491448-42491467 | None:intergenic | 35.0% | |
| GGCTAAACGTGAAATGAATT+TGG | - | chr2_2:42491977-42491996 | Msa0252000:intron | 35.0% | |
| ATTTAACATGGTACAGAGTC+GGG | + | chr2_2:42492185-42492204 | None:intergenic | 35.0% | |
| GACTCTGTACCATGTTAAAT+TGG | - | chr2_2:42492185-42492204 | Msa0252000:intron | 35.0% | |
| GATTCAGACCCAATTTAACA+TGG | + | chr2_2:42492197-42492216 | None:intergenic | 35.0% | |
| GTGACATTTCTTAGGTTCTA+GGG | + | chr2_2:42492277-42492296 | None:intergenic | 35.0% | |
| TGTGACATTTCTTAGGTTCT+AGG | + | chr2_2:42492278-42492297 | None:intergenic | 35.0% | |
| ! | TTAGAGATTAGCGTTGAAGT+TGG | + | chr2_2:42492327-42492346 | None:intergenic | 35.0% |
| GGATGGTTTATTTGGAGAAA+AGG | + | chr2_2:42492378-42492397 | None:intergenic | 35.0% | |
| !! | ATATTTTCAATCGCCGCTTT+TGG | - | chr2_2:42492591-42492610 | Msa0252000:intron | 35.0% |
| TCTCCTTGGAATAAGTTTCA+TGG | - | chr2_2:42493625-42493644 | Msa0252000:intron | 35.0% | |
| !!! | TTGCTTATATTTTAGGACGG+AGG | - | chr2_2:42493829-42493848 | Msa0252000:intron | 35.0% |
| !!! | TGCTTATATTTTAGGACGGA+GGG | - | chr2_2:42493830-42493849 | Msa0252000:intron | 35.0% |
| GTTCCTTAACATGTGTCTTT+AGG | - | chr2_2:42494005-42494024 | Msa0252000:intron | 35.0% | |
| TACCCTAAAGACACATGTTA+AGG | + | chr2_2:42494011-42494030 | None:intergenic | 35.0% | |
| !!! | AGTTGTGATGTGGTTTTGTA+GGG | + | chr2_2:42494127-42494146 | None:intergenic | 35.0% |
| !!! | AAGTTGTGATGTGGTTTTGT+AGG | + | chr2_2:42494128-42494147 | None:intergenic | 35.0% |
| TGAGACAAAAAGTTGTGATG+TGG | + | chr2_2:42494137-42494156 | None:intergenic | 35.0% | |
| ! | TTGTGGACAAAAGGTTGTTT+TGG | + | chr2_2:42494180-42494199 | None:intergenic | 35.0% |
| !!! | GTGGATTTTTTGTGGACAAA+AGG | + | chr2_2:42494189-42494208 | None:intergenic | 35.0% |
| AATATCACAAGACACAGACA+CGG | + | chr2_2:42494312-42494331 | None:intergenic | 35.0% | |
| TTTGTAATAGCAGCTTTCGT+AGG | - | chr2_2:42494604-42494623 | Msa0252000:intron | 35.0% | |
| TTGTAATAGCAGCTTTCGTA+GGG | - | chr2_2:42494605-42494624 | Msa0252000:intron | 35.0% | |
| GGAACAATTATAGGTGTAAG+TGG | - | chr2_2:42494758-42494777 | Msa0252000:intron | 35.0% | |
| AGTGTTCATTGCACTATTGA+AGG | - | chr2_2:42494784-42494803 | Msa0252000:intron | 35.0% | |
| GTGTTCATTGCACTATTGAA+GGG | - | chr2_2:42494785-42494804 | Msa0252000:intron | 35.0% | |
| !! | GTGCCAATGATTGATTTTGA+AGG | + | chr2_2:42494839-42494858 | None:intergenic | 35.0% |
| CCAATTCTCATCACTTTCTA+AGG | + | chr2_2:42494864-42494883 | None:intergenic | 35.0% | |
| CCTTAGAAAGTGATGAGAAT+TGG | - | chr2_2:42494861-42494880 | Msa0252000:intron | 35.0% | |
| AGTGTAGGTGTGATACAATA+AGG | - | chr2_2:42495081-42495100 | Msa0252000:intron | 35.0% | |
| ATCATCCAACCGAAAAATCT+GGG | + | chr2_2:42495516-42495535 | None:intergenic | 35.0% | |
| AATCATCCAACCGAAAAATC+TGG | + | chr2_2:42495517-42495536 | None:intergenic | 35.0% | |
| GATAATGCATTTGTATGCAG+GGG | + | chr2_2:42495632-42495651 | None:intergenic | 35.0% | |
| GGATAATGCATTTGTATGCA+GGG | + | chr2_2:42495633-42495652 | None:intergenic | 35.0% | |
| AAAAGACGCTCATTTGGTAA+GGG | + | chr2_2:42495654-42495673 | None:intergenic | 35.0% | |
| GCTCAAATGATCATCCATAT+TGG | + | chr2_2:42496110-42496129 | None:intergenic | 35.0% | |
| GCTGAAAGAGATAACGTATT+TGG | + | chr2_2:42496458-42496477 | None:intergenic | 35.0% | |
| ATCACTAGTGACACTATTCA+TGG | - | chr2_2:42496508-42496527 | Msa0252000:intron | 35.0% | |
| AAGTAATCTTCCACGCATTT+AGG | + | chr2_2:42496541-42496560 | None:intergenic | 35.0% | |
| GTCACAATTAATGTGGAAAC+AGG | + | chr2_2:42496775-42496794 | None:intergenic | 35.0% | |
| ! | CTTCATGAGGAAGTATACAT+TGG | - | chr2_2:42496814-42496833 | Msa0252000:intron | 35.0% |
| ! | ATGAGGAAGTATACATTGGA+AGG | - | chr2_2:42496818-42496837 | Msa0252000:intron | 35.0% |
| GGCTTGTATATTGTTCTTTG+GGG | - | chr2_2:42496992-42497011 | Msa0252000:intron | 35.0% | |
| ! | TGTAGTTGATGTGAAAGAGA+AGG | - | chr2_2:42497027-42497046 | Msa0252000:intron | 35.0% |
| ! | GTCGCATTAACGATAGATTT+TGG | + | chr2_2:42497058-42497077 | None:intergenic | 35.0% |
| AGCAACAGGAGCAAGAAAAA+TGG | + | chr2_2:42490848-42490867 | None:intergenic | 40.0% | |
| ! | GCTCCTGTTGCTTATATATC+AGG | - | chr2_2:42490856-42490875 | Msa0252000:CDS | 40.0% |
| AGTATCCTATTGGGTTCAGT+GGG | - | chr2_2:42491659-42491678 | Msa0252000:intron | 40.0% | |
| TGTAGAAGCTCTTCTATGGA+CGG | + | chr2_2:42491950-42491969 | None:intergenic | 40.0% | |
| TTCATTTCACGTTTAGCCCA+TGG | + | chr2_2:42491975-42491994 | None:intergenic | 40.0% | |
| !! | ATGATGATGGGTGTTGAAGT+TGG | + | chr2_2:42492118-42492137 | None:intergenic | 40.0% |
| CGGGTTAAGAATTGCAATGT+AGG | + | chr2_2:42492166-42492185 | None:intergenic | 40.0% | |
| CTGAATCTCATCCCAAAAGT+TGG | - | chr2_2:42492210-42492229 | Msa0252000:intron | 40.0% | |
| TTTCCTGGGGATGGTTTATT+TGG | + | chr2_2:42492386-42492405 | None:intergenic | 40.0% | |
| ! | GGTTCTGGTTAGTAAAGTGT+TGG | - | chr2_2:42493363-42493382 | Msa0252000:intron | 40.0% |
| GCACAAAAACCTGCTTCTAT+TGG | + | chr2_2:42493410-42493429 | None:intergenic | 40.0% | |
| !! | GGGAGTATAGTGTTGTTTGA+CGG | - | chr2_2:42493850-42493869 | Msa0252000:intron | 40.0% |
| !! | GGAGTATAGTGTTGTTTGAC+GGG | - | chr2_2:42493851-42493870 | Msa0252000:intron | 40.0% |
| CACACACATATGAGACTGAT+TGG | - | chr2_2:42494462-42494481 | Msa0252000:intron | 40.0% | |
| ! | TGTTTTGCACAGCATTACCT+TGG | - | chr2_2:42494498-42494517 | Msa0252000:intron | 40.0% |
| GCTATTACAAATGTCACTGC+TGG | + | chr2_2:42494595-42494614 | None:intergenic | 40.0% | |
| CTTTGTGCATTTAGCAGCTT+TGG | + | chr2_2:42494812-42494831 | None:intergenic | 40.0% | |
| AGTGATGAGAATTGGTTGCT+TGG | - | chr2_2:42494869-42494888 | Msa0252000:intron | 40.0% | |
| !! | TTTTCGGAAGTTGTGTTGCT+TGG | - | chr2_2:42494903-42494922 | Msa0252000:intron | 40.0% |
| !!! | GTCAGTTTGGCTTATTTTGC+AGG | - | chr2_2:42494925-42494944 | Msa0252000:intron | 40.0% |
| ! | AGAGTGTAGCCCAGATTTTT+CGG | - | chr2_2:42495504-42495523 | Msa0252000:intron | 40.0% |
| !! | TTTTTGGTCAAGTAGCCTAG+CGG | - | chr2_2:42495552-42495571 | Msa0252000:intron | 40.0% |
| CGGCGAGAAATTCACTTTAA+AGG | - | chr2_2:42495572-42495591 | Msa0252000:intron | 40.0% | |
| GGGATAATGCATTTGTATGC+AGG | + | chr2_2:42495634-42495653 | None:intergenic | 40.0% | |
| GAAAAGACGCTCATTTGGTA+AGG | + | chr2_2:42495655-42495674 | None:intergenic | 40.0% | |
| CAAGAGAAAAGACGCTCATT+TGG | + | chr2_2:42495660-42495679 | None:intergenic | 40.0% | |
| AGGTAAAAAAGGACGAGACA+TGG | + | chr2_2:42495788-42495807 | None:intergenic | 40.0% | |
| CACCTTGCATGAAAAAGTGA+CGG | - | chr2_2:42495859-42495878 | Msa0252000:intron | 40.0% | |
| !!! | AACCGTCACTTTTTCATGCA+AGG | + | chr2_2:42495864-42495883 | None:intergenic | 40.0% |
| ACGCAAGTGTATTTCTCAGT+GGG | + | chr2_2:42495953-42495972 | None:intergenic | 40.0% | |
| CAACAACAACACAGGTGAAT+TGG | + | chr2_2:42496082-42496101 | None:intergenic | 40.0% | |
| ! | TTCACCTGTGTTGTTGTTGT+TGG | - | chr2_2:42496083-42496102 | Msa0252000:intron | 40.0% |
| ! | TTGTTGTTGTTGGCCCAATA+TGG | - | chr2_2:42496093-42496112 | Msa0252000:intron | 40.0% |
| ! | CGAAAACTGATATTTTGCGG+AGG | + | chr2_2:42496265-42496284 | None:intergenic | 40.0% |
| GGAACCTGAGTAAGATGTAA+AGG | + | chr2_2:42496419-42496438 | None:intergenic | 40.0% | |
| TTTGGATGGCTTTCATATGC+TGG | + | chr2_2:42496440-42496459 | None:intergenic | 40.0% | |
| ATACGTTATCTCTTTCAGCC+TGG | - | chr2_2:42496459-42496478 | Msa0252000:intron | 40.0% | |
| TTCAGCCTGGATGTGTTTAA+TGG | - | chr2_2:42496472-42496491 | Msa0252000:intron | 40.0% | |
| TGTTGCCATTAAACACATCC+AGG | + | chr2_2:42496480-42496499 | None:intergenic | 40.0% | |
| TTCTTGAAATGCACCATGCT+TGG | + | chr2_2:42496723-42496742 | None:intergenic | 40.0% | |
| GTAAACATAGCAGAGAAGAG+AGG | + | chr2_2:42496751-42496770 | None:intergenic | 40.0% | |
| !! | AGCTGTTTTGTTGCTTCATG+AGG | - | chr2_2:42496801-42496820 | Msa0252000:intron | 40.0% |
| ! | GTTAGCTTGATAGGTGCAAT+TGG | - | chr2_2:42496959-42496978 | Msa0252000:CDS | 40.0% |
| ATCTATCGTTAATGCGACAG+AGG | - | chr2_2:42497060-42497079 | Msa0252000:intron | 40.0% | |
| TCTATCGTTAATGCGACAGA+GGG | - | chr2_2:42497061-42497080 | Msa0252000:intron | 40.0% | |
| TTTGGAGGGTTTGAGTCCAA+TGG | - | chr2_2:42490792-42490811 | Msa0252000:three_prime_UTR | 45.0% | |
| GAGTATCCTATTGGGTTCAG+TGG | - | chr2_2:42491658-42491677 | Msa0252000:intron | 45.0% | |
| CATAACCCACTGAACCCAAT+AGG | + | chr2_2:42491667-42491686 | None:intergenic | 45.0% | |
| GGCTTGTAGAAGCTCTTCTA+TGG | + | chr2_2:42491954-42491973 | None:intergenic | 45.0% | |
| AGAAGAGCTTCTACAAGCCA+TGG | - | chr2_2:42491955-42491974 | Msa0252000:intron | 45.0% | |
| GAAGAGCTTCTACAAGCCAT+GGG | - | chr2_2:42491956-42491975 | Msa0252000:intron | 45.0% | |
| ACCCATCATCATATCCGATG+TGG | - | chr2_2:42492126-42492145 | Msa0252000:intron | 45.0% | |
| CCCACATCGGATATGATGAT+GGG | + | chr2_2:42492130-42492149 | None:intergenic | 45.0% | |
| CCCATCATCATATCCGATGT+GGG | - | chr2_2:42492127-42492146 | Msa0252000:intron | 45.0% | |
| ACCCACATCGGATATGATGA+TGG | + | chr2_2:42492131-42492150 | None:intergenic | 45.0% | |
| ! | AAATGGACTCAGACCCACAT+CGG | + | chr2_2:42492143-42492162 | None:intergenic | 45.0% |
| TCTCCAAATAAACCATCCCC+AGG | - | chr2_2:42492380-42492399 | Msa0252000:intron | 45.0% | |
| GGAAATTTCTTTCCTGGGGA+TGG | + | chr2_2:42492395-42492414 | None:intergenic | 45.0% | |
| TCAGAGACAGGACAAACTCA+AGG | - | chr2_2:42494069-42494088 | Msa0252000:intron | 45.0% | |
| !! | GTTGTGTTGCTTGGTCAGTT+TGG | - | chr2_2:42494912-42494931 | Msa0252000:intron | 45.0% |
| !! | TGTAGCCCAGATTTTTCGGT+TGG | - | chr2_2:42495508-42495527 | Msa0252000:intron | 45.0% |
| AAAGTGAATTTCTCGCCGCT+AGG | + | chr2_2:42495570-42495589 | None:intergenic | 45.0% | |
| AGGTGAATAAGTGGGATGTC+CGG | - | chr2_2:42495592-42495611 | Msa0252000:intron | 45.0% | |
| GGGGATGAGGAAAAACAGAT+GGG | + | chr2_2:42495933-42495952 | None:intergenic | 45.0% | |
| TGGGGATGAGGAAAAACAGA+TGG | + | chr2_2:42495934-42495953 | None:intergenic | 45.0% | |
| TGTATTTCTCAGTGGGGATG+AGG | + | chr2_2:42495946-42495965 | None:intergenic | 45.0% | |
| CGCAAGTGTATTTCTCAGTG+GGG | + | chr2_2:42495952-42495971 | None:intergenic | 45.0% | |
| CACGCAAGTGTATTTCTCAG+TGG | + | chr2_2:42495954-42495973 | None:intergenic | 45.0% | |
| !!! | TCACGCTCAGCTGTTTTGAT+GGG | - | chr2_2:42495981-42496000 | Msa0252000:intron | 45.0% |
| !! | TAGCCTTATGTCTCCAAGCA+TGG | - | chr2_2:42496707-42496726 | Msa0252000:intron | 45.0% |
| GCATGGTGCATTTCAAGAAG+AGG | - | chr2_2:42496724-42496743 | Msa0252000:intron | 45.0% | |
| GGTGCAATTGGAGTGATCAT+TGG | - | chr2_2:42496971-42496990 | Msa0252000:intron | 45.0% | |
| !!! | TAAGTAAATAAATTTTATTA+AGG | - | chr2_2:42491168-42491187 | Msa0252000:CDS | 5.0% |
| !!! | AAGTAAATAAATTTTATTAA+GGG | - | chr2_2:42491169-42491188 | Msa0252000:CDS | 5.0% |
| !!! | AATACAATTTTTATATTTTT+TGG | + | chr2_2:42492735-42492754 | None:intergenic | 5.0% |
| !!! | CATTATTTTTAATATTTTAT+TGG | + | chr2_2:42496209-42496228 | None:intergenic | 5.0% |
| GGTGAATAAGTGGGATGTCC+GGG | - | chr2_2:42495593-42495612 | Msa0252000:intron | 50.0% | |
| GTGAATAAGTGGGATGTCCG+GGG | - | chr2_2:42495594-42495613 | Msa0252000:intron | 50.0% | |
| ATGCATTTGTATGCAGGGGC+CGG | + | chr2_2:42495628-42495647 | None:intergenic | 50.0% | |
| !! | CTCACGCTCAGCTGTTTTGA+TGG | - | chr2_2:42495980-42495999 | Msa0252000:intron | 50.0% |
| TGGGCCAACAACAACAACAC+AGG | + | chr2_2:42496090-42496109 | None:intergenic | 50.0% | |
| TGGAAGCAGACCTAAATGCG+TGG | - | chr2_2:42496528-42496547 | Msa0252000:intron | 50.0% | |
| GCACCATGCTTGGAGACATA+AGG | + | chr2_2:42496713-42496732 | None:intergenic | 50.0% | |
| TGCATTTGTATGCAGGGGCC+GGG | + | chr2_2:42495627-42495646 | None:intergenic | 55.0% | |
| GCATTTGTATGCAGGGGCCG+GGG | + | chr2_2:42495626-42495645 | None:intergenic | 60.0% | |
| GATGTCCGGGGTTCGAACCC+CGG | - | chr2_2:42495606-42495625 | Msa0252000:intron | 65.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr2_2:42495614-42495633 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 42490689 | 42497309 | 42490689 | ID=Msa0252000;Name=Msa0252000 |
| chr2_2 | mRNA | 42490689 | 42497309 | 42490689 | ID=Msa0252000-mRNA-1;Parent=Msa0252000;Name=Msa0252000-mRNA-1;_AED=0.06;_eAED=0.06;_QI=5|0.66|0.57|1|0.66|0.85|7|156|370 |
| chr2_2 | exon | 42490689 | 42491034 | 42490689 | ID=Msa0252000-mRNA-1:exon:13271;Parent=Msa0252000-mRNA-1 |
| chr2_2 | exon | 42491159 | 42491310 | 42491159 | ID=Msa0252000-mRNA-1:exon:13270;Parent=Msa0252000-mRNA-1 |
| chr2_2 | exon | 42491406 | 42491564 | 42491406 | ID=Msa0252000-mRNA-1:exon:13269;Parent=Msa0252000-mRNA-1 |
| chr2_2 | exon | 42493052 | 42493289 | 42493052 | ID=Msa0252000-mRNA-1:exon:13268;Parent=Msa0252000-mRNA-1 |
| chr2_2 | exon | 42493372 | 42493488 | 42493372 | ID=Msa0252000-mRNA-1:exon:13267;Parent=Msa0252000-mRNA-1 |
| chr2_2 | exon | 42496918 | 42496989 | 42496918 | ID=Msa0252000-mRNA-1:exon:13266;Parent=Msa0252000-mRNA-1 |
| chr2_2 | exon | 42497120 | 42497309 | 42497120 | ID=Msa0252000-mRNA-1:exon:13265;Parent=Msa0252000-mRNA-1 |
| chr2_2 | five_prime_UTR | 42497305 | 42497309 | 42497305 | ID=Msa0252000-mRNA-1:five_prime_utr;Parent=Msa0252000-mRNA-1 |
| chr2_2 | CDS | 42497120 | 42497304 | 42497120 | ID=Msa0252000-mRNA-1:cds;Parent=Msa0252000-mRNA-1 |
| chr2_2 | CDS | 42496918 | 42496989 | 42496918 | ID=Msa0252000-mRNA-1:cds;Parent=Msa0252000-mRNA-1 |
| chr2_2 | CDS | 42493372 | 42493488 | 42493372 | ID=Msa0252000-mRNA-1:cds;Parent=Msa0252000-mRNA-1 |
| chr2_2 | CDS | 42493052 | 42493289 | 42493052 | ID=Msa0252000-mRNA-1:cds;Parent=Msa0252000-mRNA-1 |
| chr2_2 | CDS | 42491406 | 42491564 | 42491406 | ID=Msa0252000-mRNA-1:cds;Parent=Msa0252000-mRNA-1 |
| chr2_2 | CDS | 42491159 | 42491310 | 42491159 | ID=Msa0252000-mRNA-1:cds;Parent=Msa0252000-mRNA-1 |
| chr2_2 | CDS | 42490845 | 42491034 | 42490845 | ID=Msa0252000-mRNA-1:cds;Parent=Msa0252000-mRNA-1 |
| chr2_2 | three_prime_UTR | 42490689 | 42490844 | 42490689 | ID=Msa0252000-mRNA-1:three_prime_utr;Parent=Msa0252000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
