Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0255750 | XP_013464623.1 | 94.275 | 524 | 11 | 2 | 1 | 506 | 1 | 523 | 0.0 | 1011 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0255750 | sp|Q5QLR5|ZFP1_ORYSJ | 28.457 | 499 | 300 | 16 | 38 | 502 | 44 | 519 | 3.02e-30 | 127 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0255750 | A0A072VB32 | 94.275 | 524 | 11 | 2 | 1 | 506 | 1 | 523 | 0.0 | 1011 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0255750 | Msa0333330 | 0.836127 | 1.122592e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0255750 | MtrunA17_Chr2g0316601 | 94.275 | 524 | 11 | 2 | 1 | 506 | 1 | 523 | 0.0 | 1011 |
Msa0255750 | MtrunA17_Chr2g0316591 | 40.458 | 393 | 117 | 11 | 133 | 505 | 9 | 304 | 5.84e-77 | 244 |
Msa0255750 | MtrunA17_Chr2g0315711 | 39.379 | 419 | 125 | 11 | 134 | 506 | 1 | 336 | 9.22e-69 | 223 |
Msa0255750 | MtrunA17_Chr1g0153211 | 39.416 | 137 | 52 | 3 | 387 | 500 | 579 | 707 | 2.22e-25 | 110 |
Msa0255750 | MtrunA17_Chr7g0263911 | 39.535 | 129 | 66 | 4 | 387 | 505 | 516 | 642 | 2.60e-22 | 100 |
Msa0255750 | MtrunA17_Chr2g0315681 | 35.106 | 188 | 61 | 4 | 333 | 474 | 4 | 176 | 3.35e-22 | 93.6 |
Msa0255750 | MtrunA17_Chr4g0044601 | 36.923 | 130 | 61 | 4 | 389 | 500 | 572 | 698 | 3.14e-21 | 97.4 |
Msa0255750 | MtrunA17_Chr3g0138951 | 38.393 | 112 | 52 | 1 | 402 | 496 | 419 | 530 | 2.11e-20 | 94.4 |
Msa0255750 | MtrunA17_Chr1g0181401 | 31.489 | 235 | 115 | 11 | 290 | 500 | 318 | 530 | 2.16e-19 | 91.3 |
Msa0255750 | MtrunA17_Chr1g0147951 | 30.151 | 199 | 107 | 6 | 318 | 495 | 282 | 469 | 8.06e-19 | 89.4 |
Msa0255750 | MtrunA17_Chr6g0483631 | 38.318 | 107 | 55 | 2 | 405 | 500 | 252 | 358 | 2.40e-18 | 86.7 |
Msa0255750 | MtrunA17_Chr8g0392341 | 35.455 | 110 | 60 | 1 | 402 | 500 | 243 | 352 | 2.40e-17 | 83.6 |
Msa0255750 | MtrunA17_Chr5g0401961 | 37.405 | 131 | 61 | 6 | 387 | 499 | 469 | 596 | 2.90e-16 | 81.6 |
Msa0255750 | MtrunA17_Chr1g0211831 | 29.252 | 147 | 87 | 5 | 369 | 503 | 196 | 337 | 3.25e-12 | 67.8 |
Msa0255750 | MtrunA17_Chr3g0086891 | 37.209 | 86 | 46 | 2 | 414 | 499 | 368 | 445 | 6.43e-12 | 67.8 |
Msa0255750 | MtrunA17_Chr3g0124751 | 48.936 | 47 | 24 | 0 | 452 | 498 | 184 | 230 | 2.72e-11 | 63.9 |
Msa0255750 | MtrunA17_Chr4g0032561 | 31.132 | 106 | 57 | 2 | 412 | 504 | 144 | 246 | 5.61e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0255750 | AT1G53190.2 | 35.768 | 534 | 221 | 24 | 20 | 500 | 24 | 488 | 8.05e-70 | 231 |
Msa0255750 | AT1G53190.1 | 35.768 | 534 | 221 | 24 | 20 | 500 | 24 | 488 | 8.05e-70 | 231 |
Msa0255750 | AT3G15070.1 | 34.508 | 539 | 244 | 23 | 2 | 500 | 5 | 474 | 2.59e-66 | 222 |
Msa0255750 | AT3G15070.2 | 34.508 | 539 | 244 | 23 | 2 | 500 | 5 | 474 | 2.59e-66 | 222 |
Msa0255750 | AT2G15530.5 | 34.677 | 124 | 68 | 1 | 389 | 499 | 578 | 701 | 3.11e-21 | 97.8 |
Msa0255750 | AT2G15530.3 | 34.677 | 124 | 68 | 1 | 389 | 499 | 578 | 701 | 3.11e-21 | 97.8 |
Msa0255750 | AT2G15530.2 | 34.677 | 124 | 68 | 1 | 389 | 499 | 578 | 701 | 3.11e-21 | 97.8 |
Msa0255750 | AT2G15530.1 | 34.677 | 124 | 68 | 1 | 389 | 499 | 578 | 701 | 3.11e-21 | 97.8 |
Msa0255750 | AT2G15530.7 | 34.677 | 124 | 68 | 1 | 389 | 499 | 578 | 701 | 3.11e-21 | 97.8 |
Msa0255750 | AT2G15530.6 | 34.677 | 124 | 68 | 1 | 389 | 499 | 556 | 679 | 3.53e-21 | 97.8 |
Msa0255750 | AT4G34040.1 | 36.066 | 122 | 68 | 2 | 389 | 500 | 544 | 665 | 5.99e-21 | 97.1 |
Msa0255750 | AT4G31450.1 | 38.281 | 128 | 54 | 3 | 396 | 498 | 365 | 492 | 5.33e-20 | 93.2 |
Msa0255750 | AT4G31450.2 | 38.281 | 128 | 54 | 3 | 396 | 498 | 365 | 492 | 5.33e-20 | 93.2 |
Msa0255750 | AT5G42940.2 | 39.815 | 108 | 48 | 4 | 405 | 499 | 579 | 682 | 2.31e-19 | 92.0 |
Msa0255750 | AT5G42940.1 | 39.815 | 108 | 48 | 4 | 405 | 499 | 579 | 682 | 2.31e-19 | 92.0 |
Msa0255750 | AT1G45180.2 | 34.375 | 128 | 70 | 2 | 386 | 499 | 462 | 589 | 3.18e-19 | 91.3 |
Msa0255750 | AT5G24870.3 | 41.071 | 112 | 45 | 3 | 405 | 498 | 404 | 512 | 3.41e-19 | 90.9 |
Msa0255750 | AT5G24870.1 | 41.071 | 112 | 45 | 3 | 405 | 498 | 404 | 512 | 3.41e-19 | 90.9 |
Msa0255750 | AT5G24870.2 | 41.071 | 112 | 45 | 3 | 405 | 498 | 404 | 512 | 3.41e-19 | 90.9 |
Msa0255750 | AT1G45180.1 | 34.375 | 128 | 70 | 2 | 386 | 499 | 510 | 637 | 3.95e-19 | 91.3 |
Msa0255750 | AT1G45180.3 | 34.375 | 128 | 70 | 2 | 386 | 499 | 510 | 637 | 3.95e-19 | 91.3 |
Msa0255750 | AT1G45180.4 | 34.375 | 128 | 70 | 2 | 386 | 499 | 510 | 637 | 3.95e-19 | 91.3 |
Msa0255750 | AT5G10650.1 | 39.286 | 112 | 47 | 3 | 405 | 498 | 411 | 519 | 2.30e-18 | 88.6 |
Msa0255750 | AT5G10650.2 | 39.286 | 112 | 47 | 3 | 405 | 498 | 411 | 519 | 2.30e-18 | 88.6 |
Msa0255750 | AT2G15530.4 | 31.667 | 120 | 69 | 1 | 389 | 495 | 578 | 697 | 2.63e-17 | 85.9 |
Msa0255750 | AT1G73760.1 | 36.190 | 105 | 55 | 3 | 404 | 498 | 261 | 363 | 3.64e-17 | 83.6 |
Msa0255750 | AT2G37150.10 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.11 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.9 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.12 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.5 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.4 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.2 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.8 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.7 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.6 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.1 | 42.735 | 117 | 52 | 4 | 402 | 506 | 432 | 545 | 5.52e-17 | 84.3 |
Msa0255750 | AT2G37150.14 | 42.735 | 117 | 52 | 4 | 402 | 506 | 448 | 561 | 6.38e-17 | 84.0 |
Msa0255750 | AT2G37150.13 | 42.735 | 117 | 52 | 4 | 402 | 506 | 448 | 561 | 6.38e-17 | 84.0 |
Msa0255750 | AT2G37150.15 | 42.735 | 117 | 52 | 4 | 402 | 506 | 448 | 561 | 6.38e-17 | 84.0 |
Msa0255750 | AT2G37150.3 | 42.982 | 114 | 56 | 3 | 402 | 506 | 485 | 598 | 7.59e-17 | 84.0 |
Msa0255750 | AT3G47180.1 | 55.102 | 49 | 21 | 1 | 450 | 497 | 158 | 206 | 2.42e-13 | 69.7 |
Msa0255750 | AT1G17970.1 | 32.673 | 101 | 61 | 2 | 405 | 498 | 264 | 364 | 3.30e-13 | 71.6 |
Msa0255750 | AT5G67120.1 | 32.710 | 107 | 57 | 3 | 393 | 499 | 181 | 272 | 1.58e-11 | 65.5 |
Msa0255750 | AT3G19910.1 | 30.612 | 98 | 54 | 3 | 411 | 497 | 237 | 331 | 9.01e-11 | 63.9 |
Find 196 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGATTCACGGAAATTATT+TGG | 0.109610 | 2_2:-50026269 | Msa0255750:CDS |
AATGAACTTCCATTAATATT+TGG | 0.164605 | 2_2:+50025780 | None:intergenic |
CGCTCAGTGGTGACTGCTTC+AGG | 0.200470 | 2_2:-50026808 | Msa0255750:CDS |
TGCTATTGCTATTCACTTGC+TGG | 0.214244 | 2_2:+50026209 | None:intergenic |
TTCATTAGAGAGTGCAAATA+TGG | 0.217677 | 2_2:-50025763 | Msa0255750:CDS |
CCATCTTTACCTTGAATATA+AGG | 0.221482 | 2_2:+50026145 | None:intergenic |
TCTTCAGCACCAAATATTAA+TGG | 0.230319 | 2_2:-50025789 | Msa0255750:intron |
TCAAGCACATTTGCAATTTC+CGG | 0.231946 | 2_2:-50026574 | Msa0255750:CDS |
GCCTATATATCCATCCTTCT+TGG | 0.281639 | 2_2:-50024346 | Msa0255750:three_prime_UTR |
TTCCGTGAATCAAATGATTA+TGG | 0.288874 | 2_2:+50026278 | None:intergenic |
TCCTATGCATCTTCACTTCC+AGG | 0.289612 | 2_2:+50024397 | None:intergenic |
AGTGTTGGATGATGAAAATT+AGG | 0.303149 | 2_2:+50025657 | None:intergenic |
AACAACAAATATCTAAATTA+TGG | 0.316064 | 2_2:-50026932 | Msa0255750:exon |
ACAGAACCGCGTGGAGGATT+TGG | 0.319752 | 2_2:+50025561 | None:intergenic |
CTGTTGGATGTATTTACTTC+GGG | 0.327440 | 2_2:-50024178 | Msa0255750:three_prime_UTR |
TTCCGCGTCCCTTCGCTTGT+TGG | 0.333320 | 2_2:-50026358 | Msa0255750:CDS |
CCTGCCCAACTCATTTAATC+TGG | 0.334961 | 2_2:-50024243 | Msa0255750:three_prime_UTR |
ACGCCGAATGCTTAACAAAA+TGG | 0.336204 | 2_2:-50024468 | Msa0255750:CDS |
TTTACTTCGGGTAATTATAT+CGG | 0.346030 | 2_2:-50024166 | Msa0255750:three_prime_UTR |
TTGATTCACGGAAATTATTT+GGG | 0.349857 | 2_2:-50026268 | Msa0255750:CDS |
GTTCCAATGCCTTATATTCA+AGG | 0.354396 | 2_2:-50026154 | Msa0255750:intron |
CGGAAGAAGCAATGGTTTCA+TGG | 0.359905 | 2_2:-50026533 | Msa0255750:CDS |
GCAGGCAACATATATTATTC+TGG | 0.362648 | 2_2:-50026664 | Msa0255750:CDS |
TTTAAGAACAAAGAGAAGAT+TGG | 0.363877 | 2_2:-50024517 | Msa0255750:CDS |
CTAAATGAAGCTGCAGTTGC+CGG | 0.371166 | 2_2:+50025591 | None:intergenic |
CCATCAGCGTGTCTTGCATT+TGG | 0.374312 | 2_2:+50026412 | None:intergenic |
CTGCACCATCAACAGGCTTC+CGG | 0.376418 | 2_2:-50025491 | Msa0255750:CDS |
TTAAGAACAAAGAGAAGATT+GGG | 0.379287 | 2_2:-50024516 | Msa0255750:CDS |
GAGGAAACCTCAGGACATTT+CGG | 0.380713 | 2_2:+50025709 | None:intergenic |
AGAAAAGAAAAGAGAGAGAA+AGG | 0.381724 | 2_2:+50028111 | None:intergenic |
AATGCTTCTGATTTGCATAT+CGG | 0.391328 | 2_2:+50024424 | None:intergenic |
GTCACCACTGAGCGGATATT+AGG | 0.394127 | 2_2:+50026817 | None:intergenic |
GCCTATGAGGTCGGAAAATC+CGG | 0.394898 | 2_2:+50025472 | None:intergenic |
CGCTGATGGGGTTGCTATGA+TGG | 0.395905 | 2_2:-50026398 | Msa0255750:CDS |
AATTGCAAATGTGCTTGAAC+CGG | 0.397036 | 2_2:+50026579 | None:intergenic |
CATTGGAACAGAAGGATTCC+AGG | 0.406332 | 2_2:+50026168 | None:intergenic |
CTCCCCTCGCTTTCTCTCTC+CGG | 0.409927 | 2_2:-50028056 | Msa0255750:intron |
GACCATAATCATTTGATTCA+CGG | 0.410305 | 2_2:-50026280 | Msa0255750:CDS |
TATGACAATGCTAGGGTGTA+TGG | 0.411102 | 2_2:-50026745 | Msa0255750:CDS |
AAGGAGAAAGAGTATGTATG+AGG | 0.411771 | 2_2:+50028130 | None:intergenic |
TGCAATTTCCGGAGTTTCCT+TGG | 0.414026 | 2_2:-50026563 | Msa0255750:CDS |
TGCTGTTGGTTGACAGGAGG+AGG | 0.416775 | 2_2:+50025681 | None:intergenic |
GGAGTTTCCTTGGATAATTT+CGG | 0.417528 | 2_2:-50026553 | Msa0255750:CDS |
CGATGTCCGAGAGGTGTCTC+TGG | 0.419657 | 2_2:+50025444 | None:intergenic |
TCCAAGAAGGATGGATATAT+AGG | 0.427210 | 2_2:+50024345 | None:intergenic |
TTAGGGTGCTGTTGGTTGAC+AGG | 0.433698 | 2_2:+50025675 | None:intergenic |
AAGGATTCCAGGCTGTAGTA+TGG | 0.434907 | 2_2:+50026179 | None:intergenic |
AAAGTTGCTGAAGGGATTAG+AGG | 0.436373 | 2_2:-50026484 | Msa0255750:CDS |
ATTGTCCCTGCACCATCAAC+AGG | 0.444178 | 2_2:-50025498 | Msa0255750:CDS |
AAGAGAAGATTGGGATTCTT+CGG | 0.446031 | 2_2:-50024507 | Msa0255750:CDS |
GTTTGATAGATACAAAGTTC+TGG | 0.446491 | 2_2:+50024217 | None:intergenic |
GATATATAGGCAAGAAGAAA+AGG | 0.448884 | 2_2:+50024358 | None:intergenic |
CGGAAGCCTGTTGATGGTGC+AGG | 0.454179 | 2_2:+50025492 | None:intergenic |
TTGACAGGAGGAGGCGGAGG+AGG | 0.455458 | 2_2:+50025690 | None:intergenic |
CCAGATTAAATGAGTTGGGC+AGG | 0.459775 | 2_2:+50024243 | None:intergenic |
ACGCTAGAGGTCCGTACAAA+AGG | 0.459997 | 2_2:-50026507 | Msa0255750:CDS |
ATGAAGGATCGGAGAAGAAG+AGG | 0.461122 | 2_2:+50028088 | None:intergenic |
CTTCCTATGCAAGGAATAAG+AGG | 0.463274 | 2_2:-50025636 | Msa0255750:CDS |
TGTATCTATCAAACTTGTAC+AGG | 0.465520 | 2_2:-50024208 | Msa0255750:three_prime_UTR |
TCTGTTGGATGTATTTACTT+CGG | 0.466358 | 2_2:-50024179 | Msa0255750:three_prime_UTR |
TCTCAAAACAACACACGGTT+CGG | 0.466528 | 2_2:+50026858 | None:intergenic |
TTACCTTGAATATAAGGCAT+TGG | 0.467971 | 2_2:+50026151 | None:intergenic |
CATAGAGGATATGTCTTATG+AGG | 0.468235 | 2_2:-50025225 | Msa0255750:intron |
AAAATCCGGAAGCCTGTTGA+TGG | 0.469794 | 2_2:+50025486 | None:intergenic |
GAGGCGGAGGAGGAAACCTC+AGG | 0.473580 | 2_2:+50025700 | None:intergenic |
AGGAGAAAGAGTATGTATGA+GGG | 0.476205 | 2_2:+50028131 | None:intergenic |
CTAGCATTGTCATAAGCATC+TGG | 0.479482 | 2_2:+50026754 | None:intergenic |
TCATTAGAGAGTGCAAATAT+GGG | 0.489900 | 2_2:-50025762 | Msa0255750:CDS |
ACCAGCGGCTCCTCCGTGGT+TGG | 0.492843 | 2_2:-50026233 | Msa0255750:CDS |
CAATATCAGCTTTCACCCTC+CGG | 0.495856 | 2_2:-50025610 | Msa0255750:CDS |
TCTGTGATCCCTCCACAGAC+TGG | 0.495947 | 2_2:-50025543 | Msa0255750:CDS |
TGATTCTTGCATAATATGTC+AGG | 0.497715 | 2_2:-50024670 | Msa0255750:intron |
TTGAAGCAGCATTAAAATGT+TGG | 0.497787 | 2_2:+50026455 | None:intergenic |
TCAGCGTGTCTTGCATTTGG+TGG | 0.498324 | 2_2:+50026415 | None:intergenic |
GTGAATAGCAATAGCAATGA+TGG | 0.498463 | 2_2:-50026202 | Msa0255750:CDS |
CTGCCCAACTCATTTAATCT+GGG | 0.500266 | 2_2:-50024242 | Msa0255750:three_prime_UTR |
TATGGATCAGATGACAGATT+CGG | 0.501902 | 2_2:-50026914 | Msa0255750:CDS |
TCCAACCACGGAGGAGCCGC+TGG | 0.503302 | 2_2:+50026232 | None:intergenic |
GGAGGCAGCTTCTGACGATC+AGG | 0.504055 | 2_2:-50024697 | Msa0255750:CDS |
AGAGCCTCCGATCAGTTGCC+CGG | 0.505728 | 2_2:-50026598 | Msa0255750:CDS |
GTGCCCAGATTAAATGAGTT+GGG | 0.506160 | 2_2:+50024239 | None:intergenic |
GCTCAGTGGTGACTGCTTCA+GGG | 0.508478 | 2_2:-50026807 | Msa0255750:CDS |
CAGATGCTTATGACAATGCT+AGG | 0.510340 | 2_2:-50026753 | Msa0255750:CDS |
AAATCAGAAGCATTGGCTCC+TGG | 0.510734 | 2_2:-50024415 | Msa0255750:CDS |
ATTCCTTGCATAGGAAGTGT+TGG | 0.512559 | 2_2:+50025642 | None:intergenic |
GTCCCTTCGCTTGTTGGAGT+AGG | 0.522621 | 2_2:-50026352 | Msa0255750:CDS |
AAGCAGCATTAAAATGTTGG+TGG | 0.523578 | 2_2:+50026458 | None:intergenic |
GATAATTTCGGAAGAAGCAA+TGG | 0.525023 | 2_2:-50026541 | Msa0255750:CDS |
CGGAGGCTCTATGAGGCAAA+GGG | 0.525029 | 2_2:+50026611 | None:intergenic |
CTCCAACAAGCGAAGGGACG+CGG | 0.527906 | 2_2:+50026356 | None:intergenic |
GAAGGGACGCGGAATGGCAA+TGG | 0.528064 | 2_2:+50026367 | None:intergenic |
TAGGTCAGGTGAGTCTATTA+TGG | 0.528107 | 2_2:-50026308 | Msa0255750:CDS |
TCAGATGACAGATTCGGATA+GGG | 0.528522 | 2_2:-50026908 | Msa0255750:CDS |
GGTGCCCAGATTAAATGAGT+TGG | 0.530655 | 2_2:+50024238 | None:intergenic |
GTCTCTGGCATGAGCCTATG+AGG | 0.533367 | 2_2:+50025459 | None:intergenic |
GAACCGCGTGGAGGATTTGG+TGG | 0.533801 | 2_2:+50025564 | None:intergenic |
ACAAGCGAAGGGACGCGGAA+TGG | 0.534548 | 2_2:+50026361 | None:intergenic |
ACCTCAACATAATCTTGAGA+TGG | 0.534598 | 2_2:-50026698 | Msa0255750:CDS |
TGGTTGACAGGAGGAGGCGG+AGG | 0.535378 | 2_2:+50025687 | None:intergenic |
GGTGGTGCGTGGAGTAGGTC+AGG | 0.537796 | 2_2:-50026322 | Msa0255750:CDS |
AGAGAGAATTGATGAAGGAT+CGG | 0.540914 | 2_2:+50028077 | None:intergenic |
TGTTGGTTGACAGGAGGAGG+CGG | 0.541304 | 2_2:+50025684 | None:intergenic |
TTGTACAGGCTCTGTTCTGT+TGG | 0.541603 | 2_2:-50024194 | Msa0255750:three_prime_UTR |
AGATTAAATGAGTTGGGCAG+GGG | 0.542464 | 2_2:+50024245 | None:intergenic |
ATGAATCCTTCTTCAAGTAC+CGG | 0.543347 | 2_2:-50026640 | Msa0255750:CDS |
GCCTCAAAACCAGTCTGTGG+AGG | 0.546656 | 2_2:+50025534 | None:intergenic |
GTTGCTTTAATTGATGAAGT+GGG | 0.548506 | 2_2:-50025284 | Msa0255750:CDS |
ATTGCAAATGTGCTTGAACC+GGG | 0.550500 | 2_2:+50026580 | None:intergenic |
ACATCGAAGTCTACCTCCTG+TGG | 0.550615 | 2_2:-50025427 | Msa0255750:CDS |
ATGACAATGCTAGGGTGTAT+GGG | 0.551620 | 2_2:-50026744 | Msa0255750:CDS |
GATATTAGGATGTCCGACGC+TGG | 0.554923 | 2_2:+50026831 | None:intergenic |
GAGATGGGCGTTGCAACTGC+AGG | 0.556607 | 2_2:-50026682 | Msa0255750:CDS |
AGATATGCGCTTGGACATAG+AGG | 0.557322 | 2_2:-50025240 | Msa0255750:CDS |
AATAAATTATCCAAGAAGGA+TGG | 0.558527 | 2_2:+50024336 | None:intergenic |
GGAGAAAGAGTATGTATGAG+GGG | 0.558937 | 2_2:+50028132 | None:intergenic |
ATATAAGGCATTGGAACAGA+AGG | 0.559252 | 2_2:+50026160 | None:intergenic |
AACTGATCGGAGGCTCTATG+AGG | 0.559872 | 2_2:+50026604 | None:intergenic |
TCGGAGGCTCTATGAGGCAA+AGG | 0.561316 | 2_2:+50026610 | None:intergenic |
GCTTCTTCCGAAATTATCCA+AGG | 0.561905 | 2_2:+50026546 | None:intergenic |
TGGCCTCTTATTCCTTGCAT+AGG | 0.562377 | 2_2:+50025633 | None:intergenic |
CTATGTCCAAGCGCATATCT+CGG | 0.562525 | 2_2:+50025243 | None:intergenic |
CAGAGGTATCATGACACAGC+TGG | 0.566116 | 2_2:-50025735 | Msa0255750:CDS |
CACATGGTGGTGCGTGGAGT+AGG | 0.567371 | 2_2:-50026327 | Msa0255750:CDS |
GATATGCAAATCAGAAGCAT+TGG | 0.568996 | 2_2:-50024422 | Msa0255750:CDS |
ATCAGATGACAGATTCGGAT+AGG | 0.570622 | 2_2:-50026909 | Msa0255750:CDS |
ATGATGGCCATACTACAGCC+TGG | 0.570898 | 2_2:-50026186 | Msa0255750:CDS |
GCTTGAACCGGGCAACTGAT+CGG | 0.574475 | 2_2:+50026591 | None:intergenic |
GTGTTGGATGATGAAAATTA+GGG | 0.574854 | 2_2:+50025658 | None:intergenic |
CAAATGCAAGACACGCTGAT+GGG | 0.574966 | 2_2:-50026411 | Msa0255750:CDS |
GATGAAAATTAGGGTGCTGT+TGG | 0.575008 | 2_2:+50025667 | None:intergenic |
CCTCAACATAATCTTGAGAT+GGG | 0.577889 | 2_2:-50026697 | Msa0255750:CDS |
AAAACACCGGTACTTGAAGA+AGG | 0.580193 | 2_2:+50026634 | None:intergenic |
CTCATGCCAGAGACACCTCT+CGG | 0.583685 | 2_2:-50025450 | Msa0255750:CDS |
CAGATTAAATGAGTTGGGCA+GGG | 0.584022 | 2_2:+50024244 | None:intergenic |
ATCCACCAGCGGCTCCTCCG+TGG | 0.584194 | 2_2:-50026237 | Msa0255750:CDS |
AGGGGAGAGAGAATTGATGA+AGG | 0.584621 | 2_2:+50028072 | None:intergenic |
CCTCAAAACCAGTCTGTGGA+GGG | 0.584848 | 2_2:+50025535 | None:intergenic |
TAGGAAATATTACATCAACT+TGG | 0.588215 | 2_2:+50025397 | None:intergenic |
AACCACGGAGGAGCCGCTGG+TGG | 0.589772 | 2_2:+50026235 | None:intergenic |
TACAAAAGGAAAGTTGCTGA+AGG | 0.589827 | 2_2:-50026493 | Msa0255750:CDS |
GAAATTATCCAAGGAAACTC+CGG | 0.592002 | 2_2:+50026555 | None:intergenic |
ATATTAGGATGTCCGACGCT+GGG | 0.592269 | 2_2:+50026832 | None:intergenic |
ATCTCAAGATTATGTTGAGG+TGG | 0.592343 | 2_2:+50026700 | None:intergenic |
TGTTGCTTTAATTGATGAAG+TGG | 0.594407 | 2_2:-50025285 | Msa0255750:CDS |
TATGGGATTACACAATTCAA+CGG | 0.594919 | 2_2:-50026727 | Msa0255750:CDS |
CCATCACCGAGATATGCGCT+TGG | 0.597250 | 2_2:-50025249 | Msa0255750:CDS |
AGACACTGGTATTAATCTTG+AGG | 0.597760 | 2_2:-50024718 | Msa0255750:CDS |
TCCTGGAAGTGAAGATGCAT+AGG | 0.598596 | 2_2:-50024398 | Msa0255750:exon |
CTTGTTGGAGTAGGACCACA+TGG | 0.599100 | 2_2:-50026343 | Msa0255750:CDS |
CATCGAAGTCTACCTCCTGT+GGG | 0.601241 | 2_2:-50025426 | Msa0255750:CDS |
GTTTATTCAACGAAAGACAC+TGG | 0.604599 | 2_2:-50024732 | Msa0255750:CDS |
GGAAGCCTGTTGATGGTGCA+GGG | 0.605440 | 2_2:+50025493 | None:intergenic |
CATCCAACACTTCCTATGCA+AGG | 0.607391 | 2_2:-50025645 | Msa0255750:CDS |
TAGGACCACATGGTGGTGCG+TGG | 0.613744 | 2_2:-50026333 | Msa0255750:CDS |
AATGAAGCTGCAGTTGCCGG+AGG | 0.616310 | 2_2:+50025594 | None:intergenic |
GAGGGTGAAAGCTGATATTG+TGG | 0.617101 | 2_2:+50025613 | None:intergenic |
GTCCTACTCCAACAAGCGAA+GGG | 0.619144 | 2_2:+50026350 | None:intergenic |
AGATGCTTATGACAATGCTA+GGG | 0.620438 | 2_2:-50026752 | Msa0255750:CDS |
CCAAATGCAAGACACGCTGA+TGG | 0.622329 | 2_2:-50026412 | Msa0255750:CDS |
ATGAAGCTGCAGTTGCCGGA+GGG | 0.622661 | 2_2:+50025595 | None:intergenic |
CTGGCATGAGCCTATGAGGT+CGG | 0.623702 | 2_2:+50025463 | None:intergenic |
CCTGCCTCAAAACCAGTCTG+TGG | 0.624755 | 2_2:+50025531 | None:intergenic |
CACTGGTATTAATCTTGAGG+AGG | 0.625931 | 2_2:-50024715 | Msa0255750:CDS |
AAATGCAAGACACGCTGATG+GGG | 0.628846 | 2_2:-50026410 | Msa0255750:CDS |
GGGTGCTGTTGGTTGACAGG+AGG | 0.632600 | 2_2:+50025678 | None:intergenic |
TGAACCGGGCAACTGATCGG+AGG | 0.632731 | 2_2:+50026594 | None:intergenic |
TTACCGGAGAGAGAAAGCGA+GGG | 0.634397 | 2_2:+50028053 | None:intergenic |
ACAAAAGGAAAGTTGCTGAA+GGG | 0.634556 | 2_2:-50026492 | Msa0255750:CDS |
TCAACTTGGAAGAAGCCCAC+AGG | 0.637486 | 2_2:+50025411 | None:intergenic |
GGACCTCTCAAAACAACACA+CGG | 0.642967 | 2_2:+50026853 | None:intergenic |
TTCACTTGCTGGTCCAACCA+CGG | 0.644447 | 2_2:+50026220 | None:intergenic |
GGTCCTACTCCAACAAGCGA+AGG | 0.645776 | 2_2:+50026349 | None:intergenic |
GGTGCAGGGACAATATGCCT+AGG | 0.646400 | 2_2:+50025507 | None:intergenic |
CCAAGCGCATATCTCGGTGA+TGG | 0.648082 | 2_2:+50025249 | None:intergenic |
ATTACCGGAGAGAGAAAGCG+AGG | 0.652740 | 2_2:+50028052 | None:intergenic |
GGTTTCATGGATGACGCTAG+AGG | 0.660436 | 2_2:-50026520 | Msa0255750:CDS |
CCCATCTCAAGATTATGTTG+AGG | 0.661253 | 2_2:+50026697 | None:intergenic |
GAAGTGAAGATGCATAGGAG+AGG | 0.667262 | 2_2:-50024393 | Msa0255750:exon |
GATAGGGATCAACAACGGCA+AGG | 0.669029 | 2_2:-50026892 | Msa0255750:CDS |
TACCGGAGAGAGAAAGCGAG+GGG | 0.673153 | 2_2:+50028054 | None:intergenic |
ACATCCTAATATCCGCTCAG+TGG | 0.683432 | 2_2:-50026821 | Msa0255750:CDS |
GTGCAAATATGGGTTTGCAG+AGG | 0.686181 | 2_2:-50025752 | Msa0255750:CDS |
ACTTGGAAGAAGCCCACAGG+AGG | 0.687893 | 2_2:+50025414 | None:intergenic |
CTACTCCACGCACCACCATG+TGG | 0.696752 | 2_2:+50026328 | None:intergenic |
GGGATCACAGAACCGCGTGG+AGG | 0.703593 | 2_2:+50025555 | None:intergenic |
ATGAGGCAAAGGGAAAACAC+CGG | 0.704367 | 2_2:+50026621 | None:intergenic |
CTGGTAACCGAAATGTCCTG+AGG | 0.705894 | 2_2:-50025716 | Msa0255750:CDS |
GGAGGGATCACAGAACCGCG+TGG | 0.710354 | 2_2:+50025552 | None:intergenic |
CTGAAGCAGTCACCACTGAG+CGG | 0.716723 | 2_2:+50026809 | None:intergenic |
GGTAGACTTCGATGTCCGAG+AGG | 0.718687 | 2_2:+50025435 | None:intergenic |
GGGACAGCACTATCCACCAG+CGG | 0.725771 | 2_2:-50026248 | Msa0255750:CDS |
AGAGATCAAAATAACATACG+AGG | 0.751502 | 2_2:+50027779 | None:intergenic |
GTTGGAGTAGGACCACATGG+TGG | 0.753723 | 2_2:-50026340 | Msa0255750:CDS |
ATTCGGATAGGGATCAACAA+CGG | 0.758621 | 2_2:-50026897 | Msa0255750:CDS |
ACTTGCTGGTCCAACCACGG+AGG | 0.779512 | 2_2:+50026223 | None:intergenic |
GTTCCACCAAATCCTCCACG+CGG | 0.818244 | 2_2:-50025567 | Msa0255750:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAATTGAAAATTTGTTAT+GGG | + | chr2_2:50024305-50024324 | None:intergenic | 10.0% |
!!! | GAAAAATTGAAAATTTGTTA+TGG | + | chr2_2:50024306-50024325 | None:intergenic | 15.0% |
!! | AAAATACAAACTTTATTACT+GGG | + | chr2_2:50024451-50024470 | None:intergenic | 15.0% |
!! | AAAAATACAAACTTTATTAC+TGG | + | chr2_2:50024452-50024471 | None:intergenic | 15.0% |
!! | AACAACAAATATCTAAATTA+TGG | - | chr2_2:50025391-50025410 | Msa0255750:intron | 15.0% |
!! | TAGAAAACTTATAAAATACT+TGG | - | chr2_2:50027197-50027216 | Msa0255750:intron | 15.0% |
!!! | TTTTTCATCTTCAATTTTCT+AGG | - | chr2_2:50024320-50024339 | Msa0255750:three_prime_UTR | 20.0% |
!!! | TTTTCATCTTCAATTTTCTA+GGG | - | chr2_2:50024321-50024340 | Msa0255750:three_prime_UTR | 20.0% |
!! | TTCATGAAAAAAACACAAAT+GGG | + | chr2_2:50024357-50024376 | None:intergenic | 20.0% |
!! | TTTCATGAAAAAAACACAAA+TGG | + | chr2_2:50024358-50024377 | None:intergenic | 20.0% |
!! | AAATACAAACTTTATTACTG+GGG | + | chr2_2:50024450-50024469 | None:intergenic | 20.0% |
!!! | TTTGTTATGTGTTCTTTTAT+TGG | - | chr2_2:50024616-50024635 | Msa0255750:intron | 20.0% |
!! | ATTATAAACCTGAAAAACAA+TGG | - | chr2_2:50024702-50024721 | Msa0255750:CDS | 20.0% |
!! | GGTTAAAGAAGAATAAAAAA+AGG | - | chr2_2:50024723-50024742 | Msa0255750:CDS | 20.0% |
!!! | TATGTGATTGTTGAATTTTT+TGG | - | chr2_2:50024758-50024777 | Msa0255750:CDS | 20.0% |
!! | AATGAACTTCCATTAATATT+TGG | + | chr2_2:50026546-50026565 | None:intergenic | 20.0% |
!! | CAATAAAACTTCATTTGTAT+AGG | - | chr2_2:50027014-50027033 | Msa0255750:intron | 20.0% |
!!! | TAAATTGTAATTTGCTTTCA+AGG | - | chr2_2:50027137-50027156 | Msa0255750:intron | 20.0% |
!! | CAAAAATAAATTATCCAAGA+AGG | + | chr2_2:50027994-50028013 | None:intergenic | 20.0% |
!!! | CTTCTTGGATAATTTATTTT+TGG | - | chr2_2:50027992-50028011 | Msa0255750:intron | 20.0% |
! | TTATGGGAAAATTGAATTAC+CGG | + | chr2_2:50024289-50024308 | None:intergenic | 25.0% |
! | TCATGAAAAAAACACAAATG+GGG | + | chr2_2:50024356-50024375 | None:intergenic | 25.0% |
! | AATTTAACAACTTGCATTCT+TGG | - | chr2_2:50024376-50024395 | Msa0255750:three_prime_UTR | 25.0% |
! | ATTTAACAACTTGCATTCTT+GGG | - | chr2_2:50024377-50024396 | Msa0255750:three_prime_UTR | 25.0% |
! | AAATCATAATCAAACGAATG+TGG | + | chr2_2:50024409-50024428 | None:intergenic | 25.0% |
!!! | TGTGATTTTTTTAACAGAGT+TGG | - | chr2_2:50024505-50024524 | Msa0255750:CDS | 25.0% |
!!! | TTTTTAACAGAGTTGGTTTT+TGG | - | chr2_2:50024512-50024531 | Msa0255750:CDS | 25.0% |
!!! | TTTTAACAGAGTTGGTTTTT+GGG | - | chr2_2:50024513-50024532 | Msa0255750:CDS | 25.0% |
!!! | TCTTGTTTTTGATGATAACA+AGG | - | chr2_2:50024587-50024606 | Msa0255750:intron | 25.0% |
!!! | TTTTTGATGATAACAAGGTA+CGG | - | chr2_2:50024592-50024611 | Msa0255750:intron | 25.0% |
!!! | TTCTTTAACCATTGTTTTTC+AGG | + | chr2_2:50024713-50024732 | None:intergenic | 25.0% |
!!! | ATTTTTTGGTTTTAACCTTC+TGG | - | chr2_2:50024772-50024791 | Msa0255750:intron | 25.0% |
! | TTAATGAGCTTCATTAACAT+CGG | + | chr2_2:50024884-50024903 | None:intergenic | 25.0% |
! | AACAAATACATTGAACCAAA+AGG | + | chr2_2:50024921-50024940 | None:intergenic | 25.0% |
!! | TTCAATGTATTTGTTGATCA+TGG | - | chr2_2:50024926-50024945 | Msa0255750:intron | 25.0% |
!! | TCAATGTATTTGTTGATCAT+GGG | - | chr2_2:50024927-50024946 | Msa0255750:intron | 25.0% |
!! | ACTTCAAAGGAAATTTTTGT+TGG | - | chr2_2:50025049-50025068 | Msa0255750:intron | 25.0% |
! | ATGTATCGTAATGATTCAAT+TGG | - | chr2_2:50025178-50025197 | Msa0255750:intron | 25.0% |
!! | TTCCTGTTATTATGACTTTT+TGG | - | chr2_2:50025286-50025305 | Msa0255750:CDS | 25.0% |
! | ATCCAAAAAGTCATAATAAC+AGG | + | chr2_2:50025291-50025310 | None:intergenic | 25.0% |
!! | TTTTTCTTTCCTTTTGTGTT+TGG | - | chr2_2:50025320-50025339 | Msa0255750:intron | 25.0% |
! | TTTGATTCACGGAAATTATT+TGG | - | chr2_2:50026054-50026073 | Msa0255750:intron | 25.0% |
! | TTGATTCACGGAAATTATTT+GGG | - | chr2_2:50026055-50026074 | Msa0255750:intron | 25.0% |
!!! | TTTCTTTGAATTTGTTACGT+TGG | - | chr2_2:50026475-50026494 | Msa0255750:CDS | 25.0% |
! | TAGGAAATATTACATCAACT+TGG | + | chr2_2:50026929-50026948 | None:intergenic | 25.0% |
!! | CTAGTATAACGTAATTTTAG+AGG | - | chr2_2:50027171-50027190 | Msa0255750:intron | 25.0% |
!! | TAAAATACTTGGAACTTGTT+TGG | - | chr2_2:50027208-50027227 | Msa0255750:intron | 25.0% |
! | AGATTATTTAGGAAAGCTTA+AGG | - | chr2_2:50027272-50027291 | Msa0255750:intron | 25.0% |
! | AATAAGCTGAAAACAACATA+TGG | + | chr2_2:50027316-50027335 | None:intergenic | 25.0% |
! | TCAAGTGCAAAATTATAGAA+TGG | + | chr2_2:50027709-50027728 | None:intergenic | 25.0% |
! | TTTAAGAACAAAGAGAAGAT+TGG | - | chr2_2:50027806-50027825 | Msa0255750:intron | 25.0% |
! | TTAAGAACAAAGAGAAGATT+GGG | - | chr2_2:50027807-50027826 | Msa0255750:intron | 25.0% |
! | AATAAATTATCCAAGAAGGA+TGG | + | chr2_2:50027990-50028009 | None:intergenic | 25.0% |
AGAAAAGAAAAGAGAGAGAA+AGG | + | chr2_2:50024215-50024234 | None:intergenic | 30.0% | |
CATGAAAAAAACACAAATGG+GGG | + | chr2_2:50024355-50024374 | None:intergenic | 30.0% | |
AGAGATCAAAATAACATACG+AGG | + | chr2_2:50024547-50024566 | None:intergenic | 30.0% | |
!! | TGTGTTCTTTTATTGGTGTT+TGG | - | chr2_2:50024623-50024642 | Msa0255750:intron | 30.0% |
!! | TTCTTTTATTGGTGTTTGGT+CGG | - | chr2_2:50024627-50024646 | Msa0255750:intron | 30.0% |
TTATGTATGTACTTTCTTGC+TGG | - | chr2_2:50024679-50024698 | Msa0255750:CDS | 30.0% | |
! | TTAACCTTCTGGTTATAATC+CGG | - | chr2_2:50024783-50024802 | Msa0255750:intron | 30.0% |
!! | TTTTGTTGGTGTTCTATGTT+TGG | - | chr2_2:50025063-50025082 | Msa0255750:intron | 30.0% |
TAAAATCAGCCAAACACAAA+AGG | + | chr2_2:50025332-50025351 | None:intergenic | 30.0% | |
!! | TGGCTGATTTTATGCTTTTT+TGG | - | chr2_2:50025340-50025359 | Msa0255750:intron | 30.0% |
!! | TTTGGTGTTCATTGAATATC+AGG | - | chr2_2:50025358-50025377 | Msa0255750:intron | 30.0% |
TATGGGATTACACAATTCAA+CGG | - | chr2_2:50025596-50025615 | Msa0255750:CDS | 30.0% | |
TTGAAGCAGCATTAAAATGT+TGG | + | chr2_2:50025871-50025890 | None:intergenic | 30.0% | |
GACCATAATCATTTGATTCA+CGG | - | chr2_2:50026043-50026062 | Msa0255750:intron | 30.0% | |
TTCCGTGAATCAAATGATTA+TGG | + | chr2_2:50026048-50026067 | None:intergenic | 30.0% | |
TTACCTTGAATATAAGGCAT+TGG | + | chr2_2:50026175-50026194 | None:intergenic | 30.0% | |
CCATCTTTACCTTGAATATA+AGG | + | chr2_2:50026181-50026200 | None:intergenic | 30.0% | |
CCTTATATTCAAGGTAAAGA+TGG | - | chr2_2:50026178-50026197 | Msa0255750:CDS | 30.0% | |
TGTAGTTTCCACTTTACATT+AGG | + | chr2_2:50026314-50026333 | None:intergenic | 30.0% | |
CGTTTCATAAATGTATTGCT+TGG | + | chr2_2:50026361-50026380 | None:intergenic | 30.0% | |
ATTTATCGACAAAGACAACA+AGG | + | chr2_2:50026384-50026403 | None:intergenic | 30.0% | |
TCTAGCATTAATTTACACCA+TGG | + | chr2_2:50026442-50026461 | None:intergenic | 30.0% | |
TCTTCAGCACCAAATATTAA+TGG | - | chr2_2:50026534-50026553 | Msa0255750:CDS | 30.0% | |
! | TTCATTAGAGAGTGCAAATA+TGG | - | chr2_2:50026560-50026579 | Msa0255750:CDS | 30.0% |
! | TCATTAGAGAGTGCAAATAT+GGG | - | chr2_2:50026561-50026580 | Msa0255750:CDS | 30.0% |
GTGTTGGATGATGAAAATTA+GGG | + | chr2_2:50026668-50026687 | None:intergenic | 30.0% | |
! | AGTGTTGGATGATGAAAATT+AGG | + | chr2_2:50026669-50026688 | None:intergenic | 30.0% |
!! | AACATGTGCATAAAAGCATT+TGG | + | chr2_2:50026972-50026991 | None:intergenic | 30.0% |
!! | TGTTGCTTTAATTGATGAAG+TGG | - | chr2_2:50027038-50027057 | Msa0255750:intron | 30.0% |
! | GTTGCTTTAATTGATGAAGT+GGG | - | chr2_2:50027039-50027058 | Msa0255750:intron | 30.0% |
TTGAACTTATCTATCAGCAT+AGG | - | chr2_2:50027241-50027260 | Msa0255750:intron | 30.0% | |
CTTATTTCAACAATCTATCC+AGG | - | chr2_2:50027330-50027349 | Msa0255750:intron | 30.0% | |
TAAGGCTTATTTGGATAAAC+AGG | + | chr2_2:50027467-50027486 | None:intergenic | 30.0% | |
! | TTTCAAGTGTAAGGCTTATT+TGG | + | chr2_2:50027476-50027495 | None:intergenic | 30.0% |
TGATTCTTGCATAATATGTC+AGG | - | chr2_2:50027653-50027672 | Msa0255750:intron | 30.0% | |
! | TGTTTCTCATTCCAACTTTT+TGG | - | chr2_2:50027729-50027748 | Msa0255750:intron | 30.0% |
! | GTTTCTCATTCCAACTTTTT+GGG | - | chr2_2:50027730-50027749 | Msa0255750:intron | 30.0% |
! | TTTCTCATTCCAACTTTTTG+GGG | - | chr2_2:50027731-50027750 | Msa0255750:intron | 30.0% |
! | CAACCATTTTGTTAAGCATT+CGG | + | chr2_2:50027861-50027880 | None:intergenic | 30.0% |
! | AATGCTTCTGATTTGCATAT+CGG | + | chr2_2:50027902-50027921 | None:intergenic | 30.0% |
GATATATAGGCAAGAAGAAA+AGG | + | chr2_2:50027968-50027987 | None:intergenic | 30.0% | |
GTTTGATAGATACAAAGTTC+TGG | + | chr2_2:50028109-50028128 | None:intergenic | 30.0% | |
TGTATCTATCAAACTTGTAC+AGG | - | chr2_2:50028115-50028134 | Msa0255750:five_prime_UTR | 30.0% | |
TCTGTTGGATGTATTTACTT+CGG | - | chr2_2:50028144-50028163 | Msa0255750:five_prime_UTR | 30.0% | |
! | AGGAGAAAGAGTATGTATGA+GGG | + | chr2_2:50024195-50024214 | None:intergenic | 35.0% |
! | AAGGAGAAAGAGTATGTATG+AGG | + | chr2_2:50024196-50024215 | None:intergenic | 35.0% |
AGAGAGAATTGATGAAGGAT+CGG | + | chr2_2:50024249-50024268 | None:intergenic | 35.0% | |
TTATAATCCGGAGTTTGATC+AGG | - | chr2_2:50024795-50024814 | Msa0255750:intron | 35.0% | |
! | AGTGTCATTGTGTTTATGCT+TGG | - | chr2_2:50024997-50025016 | Msa0255750:intron | 35.0% |
TCATTGTGTTTATGCTTGGA+GGG | - | chr2_2:50025001-50025020 | Msa0255750:intron | 35.0% | |
! | ATGCTTGGAGGGTTTTTATA+AGG | - | chr2_2:50025012-50025031 | Msa0255750:intron | 35.0% |
!!! | GTGACTACTTTTGACTTCAA+AGG | - | chr2_2:50025036-50025055 | Msa0255750:intron | 35.0% |
! | TGGTGTTCTATGTTTGGAAT+TGG | - | chr2_2:50025069-50025088 | Msa0255750:intron | 35.0% |
CGTAATGATTCAATTGGAAC+TGG | - | chr2_2:50025184-50025203 | Msa0255750:intron | 35.0% | |
! | GGTTAGCTGTTAATGATTGA+TGG | - | chr2_2:50025205-50025224 | Msa0255750:intron | 35.0% |
! | TTAAGTGCTTCATCTTTTGC+TGG | - | chr2_2:50025251-50025270 | Msa0255750:CDS | 35.0% |
TATGGATCAGATGACAGATT+CGG | - | chr2_2:50025409-50025428 | Msa0255750:intron | 35.0% | |
AGATGCTTATGACAATGCTA+GGG | - | chr2_2:50025571-50025590 | Msa0255750:CDS | 35.0% | |
ATCTCAAGATTATGTTGAGG+TGG | + | chr2_2:50025626-50025645 | None:intergenic | 35.0% | |
ACCTCAACATAATCTTGAGA+TGG | - | chr2_2:50025625-50025644 | Msa0255750:CDS | 35.0% | |
CCTCAACATAATCTTGAGAT+GGG | - | chr2_2:50025626-50025645 | Msa0255750:CDS | 35.0% | |
GCAGGCAACATATATTATTC+TGG | - | chr2_2:50025659-50025678 | Msa0255750:CDS | 35.0% | |
ATGAATCCTTCTTCAAGTAC+CGG | - | chr2_2:50025683-50025702 | Msa0255750:CDS | 35.0% | |
AATTGCAAATGTGCTTGAAC+CGG | + | chr2_2:50025747-50025766 | None:intergenic | 35.0% | |
TCAAGCACATTTGCAATTTC+CGG | - | chr2_2:50025749-50025768 | Msa0255750:CDS | 35.0% | |
GAAATTATCCAAGGAAACTC+CGG | + | chr2_2:50025771-50025790 | None:intergenic | 35.0% | |
GGAGTTTCCTTGGATAATTT+CGG | - | chr2_2:50025770-50025789 | Msa0255750:CDS | 35.0% | |
GATAATTTCGGAAGAAGCAA+TGG | - | chr2_2:50025782-50025801 | Msa0255750:CDS | 35.0% | |
! | TCAGCAACTTTCCTTTTGTA+CGG | + | chr2_2:50025830-50025849 | None:intergenic | 35.0% |
TACAAAAGGAAAGTTGCTGA+AGG | - | chr2_2:50025830-50025849 | Msa0255750:intron | 35.0% | |
ACAAAAGGAAAGTTGCTGAA+GGG | - | chr2_2:50025831-50025850 | Msa0255750:intron | 35.0% | |
AAGCAGCATTAAAATGTTGG+TGG | + | chr2_2:50025868-50025887 | None:intergenic | 35.0% | |
GTGAATAGCAATAGCAATGA+TGG | - | chr2_2:50026121-50026140 | Msa0255750:intron | 35.0% | |
!! | ATATAAGGCATTGGAACAGA+AGG | + | chr2_2:50026166-50026185 | None:intergenic | 35.0% |
GTTCCAATGCCTTATATTCA+AGG | - | chr2_2:50026169-50026188 | Msa0255750:CDS | 35.0% | |
! | ACATGTAAGAAGCTCTTTTC+AGG | - | chr2_2:50026285-50026304 | Msa0255750:CDS | 35.0% |
GCATTAATTTACACCATGGA+AGG | + | chr2_2:50026438-50026457 | None:intergenic | 35.0% | |
!! | ATGTGCATAAAAGCATTTGG+AGG | + | chr2_2:50026969-50026988 | None:intergenic | 35.0% |
CATAGAGGATATGTCTTATG+AGG | - | chr2_2:50027098-50027117 | Msa0255750:intron | 35.0% | |
! | TACTTGGAACTTGTTTGGAT+TGG | - | chr2_2:50027213-50027232 | Msa0255750:intron | 35.0% |
AGGCACTTGTCAGATTATTT+AGG | - | chr2_2:50027261-50027280 | Msa0255750:intron | 35.0% | |
! | GGAGTCAAATTTCAAGTGTA+AGG | + | chr2_2:50027485-50027504 | None:intergenic | 35.0% |
TACACTTGAAATTTGACTCC+AGG | - | chr2_2:50027485-50027504 | Msa0255750:intron | 35.0% | |
TTGAGTTTCAATTGTCTCCT+CGG | + | chr2_2:50027559-50027578 | None:intergenic | 35.0% | |
GTTTATTCAACGAAAGACAC+TGG | - | chr2_2:50027591-50027610 | Msa0255750:intron | 35.0% | |
AGACACTGGTATTAATCTTG+AGG | - | chr2_2:50027605-50027624 | Msa0255750:intron | 35.0% | |
! | AGGTACGATCTTTTAACAAC+AGG | - | chr2_2:50027673-50027692 | Msa0255750:intron | 35.0% |
GTACCTGTATATAATTCCAC+AGG | - | chr2_2:50027778-50027797 | Msa0255750:five_prime_UTR | 35.0% | |
TTGTTCTTAAATTCCTCCTG+TGG | + | chr2_2:50027797-50027816 | None:intergenic | 35.0% | |
AAGAGAAGATTGGGATTCTT+CGG | - | chr2_2:50027816-50027835 | Msa0255750:intron | 35.0% | |
! | GATATGCAAATCAGAAGCAT+TGG | - | chr2_2:50027901-50027920 | Msa0255750:intron | 35.0% |
TCCAAGAAGGATGGATATAT+AGG | + | chr2_2:50027981-50028000 | None:intergenic | 35.0% | |
CTGTTGGATGTATTTACTTC+GGG | - | chr2_2:50028145-50028164 | Msa0255750:five_prime_UTR | 35.0% | |
! | GGAGAAAGAGTATGTATGAG+GGG | + | chr2_2:50024194-50024213 | None:intergenic | 40.0% |
!! | TTTGGTCGGTGATGGTTTTT+GGG | - | chr2_2:50024641-50024660 | Msa0255750:intron | 40.0% |
AACTCCGGATTATAACCAGA+AGG | + | chr2_2:50024790-50024809 | None:intergenic | 40.0% | |
CTTATCTCCTGATCAAACTC+CGG | + | chr2_2:50024805-50024824 | None:intergenic | 40.0% | |
!!! | GATGAGAGATTGTTTTAGCC+AGG | - | chr2_2:50024833-50024852 | Msa0255750:intron | 40.0% |
TTTAGCCAGGTACCAAACTT+CGG | - | chr2_2:50024846-50024865 | Msa0255750:intron | 40.0% | |
TCTATCGAGATACCGAAGTT+TGG | + | chr2_2:50024861-50024880 | None:intergenic | 40.0% | |
! | ATCACTTGAGACGAACCTTT+TGG | - | chr2_2:50024903-50024922 | Msa0255750:intron | 40.0% |
GTCATTGTGTTTATGCTTGG+AGG | - | chr2_2:50025000-50025019 | Msa0255750:intron | 40.0% | |
ATCAGATGACAGATTCGGAT+AGG | - | chr2_2:50025414-50025433 | Msa0255750:CDS | 40.0% | |
TCAGATGACAGATTCGGATA+GGG | - | chr2_2:50025415-50025434 | Msa0255750:CDS | 40.0% | |
ATTCGGATAGGGATCAACAA+CGG | - | chr2_2:50025426-50025445 | Msa0255750:CDS | 40.0% | |
TCTCAAAACAACACACGGTT+CGG | + | chr2_2:50025468-50025487 | None:intergenic | 40.0% | |
CTAGCATTGTCATAAGCATC+TGG | + | chr2_2:50025572-50025591 | None:intergenic | 40.0% | |
CAGATGCTTATGACAATGCT+AGG | - | chr2_2:50025570-50025589 | Msa0255750:CDS | 40.0% | |
TATGACAATGCTAGGGTGTA+TGG | - | chr2_2:50025578-50025597 | Msa0255750:CDS | 40.0% | |
ATGACAATGCTAGGGTGTAT+GGG | - | chr2_2:50025579-50025598 | Msa0255750:CDS | 40.0% | |
CCCATCTCAAGATTATGTTG+AGG | + | chr2_2:50025629-50025648 | None:intergenic | 40.0% | |
AAAACACCGGTACTTGAAGA+AGG | + | chr2_2:50025692-50025711 | None:intergenic | 40.0% | |
ATTGCAAATGTGCTTGAACC+GGG | + | chr2_2:50025746-50025765 | None:intergenic | 40.0% | |
GCTTCTTCCGAAATTATCCA+AGG | + | chr2_2:50025780-50025799 | None:intergenic | 40.0% | |
AAAGTTGCTGAAGGGATTAG+AGG | - | chr2_2:50025839-50025858 | Msa0255750:intron | 40.0% | |
TAGGTCAGGTGAGTCTATTA+TGG | - | chr2_2:50026015-50026034 | Msa0255750:intron | 40.0% | |
! | TGCTATTGCTATTCACTTGC+TGG | + | chr2_2:50026117-50026136 | None:intergenic | 40.0% |
TCAGGCATCCTAATGTAAAG+TGG | - | chr2_2:50026303-50026322 | Msa0255750:CDS | 40.0% | |
AAGTGGAAACTACAGCTTCT+TGG | - | chr2_2:50026320-50026339 | Msa0255750:CDS | 40.0% | |
AAACTACAGCTTCTTGGATG+TGG | - | chr2_2:50026326-50026345 | Msa0255750:CDS | 40.0% | |
!! | GATGAAAATTAGGGTGCTGT+TGG | + | chr2_2:50026659-50026678 | None:intergenic | 40.0% |
! | ATTCCTTGCATAGGAAGTGT+TGG | + | chr2_2:50026684-50026703 | None:intergenic | 40.0% |
CTTCCTATGCAAGGAATAAG+AGG | - | chr2_2:50026687-50026706 | Msa0255750:CDS | 40.0% | |
GGAAACATGTGAAGAGACAT+AGG | + | chr2_2:50026948-50026967 | None:intergenic | 40.0% | |
TGTCTTATGAGGTAAGTGCA+TGG | - | chr2_2:50027109-50027128 | Msa0255750:intron | 40.0% | |
GTTGTTTGCATAAGCTATCC+TGG | + | chr2_2:50027351-50027370 | None:intergenic | 40.0% | |
AGGATAGGCAATGTAAACAC+TGG | - | chr2_2:50027528-50027547 | Msa0255750:intron | 40.0% | |
!! | TGTAAACACTGGTTTATCCG+AGG | - | chr2_2:50027539-50027558 | Msa0255750:intron | 40.0% |
CACTGGTATTAATCTTGAGG+AGG | - | chr2_2:50027608-50027627 | Msa0255750:intron | 40.0% | |
AAAGAACTGCCCCAAAAAGT+TGG | + | chr2_2:50027743-50027762 | None:intergenic | 40.0% | |
CCTCCTGTGGAATTATATAC+AGG | + | chr2_2:50027784-50027803 | None:intergenic | 40.0% | |
CCTGTATATAATTCCACAGG+AGG | - | chr2_2:50027781-50027800 | Msa0255750:five_prime_UTR | 40.0% | |
ACGCCGAATGCTTAACAAAA+TGG | - | chr2_2:50027855-50027874 | Msa0255750:intron | 40.0% | |
GCCTATATATCCATCCTTCT+TGG | - | chr2_2:50027977-50027996 | Msa0255750:intron | 40.0% | |
! | AGATTAAATGAGTTGGGCAG+GGG | + | chr2_2:50028081-50028100 | None:intergenic | 40.0% |
! | CAGATTAAATGAGTTGGGCA+GGG | + | chr2_2:50028082-50028101 | None:intergenic | 40.0% |
CTGCCCAACTCATTTAATCT+GGG | - | chr2_2:50028081-50028100 | Msa0255750:five_prime_UTR | 40.0% | |
GTGCCCAGATTAAATGAGTT+GGG | + | chr2_2:50028087-50028106 | None:intergenic | 40.0% | |
ATGAAGGATCGGAGAAGAAG+AGG | + | chr2_2:50024238-50024257 | None:intergenic | 45.0% | |
AGGGGAGAGAGAATTGATGA+AGG | + | chr2_2:50024254-50024273 | None:intergenic | 45.0% | |
! | TATTGGTGTTTGGTCGGTGA+TGG | - | chr2_2:50024633-50024652 | Msa0255750:intron | 45.0% |
!! | GTTTGGTCGGTGATGGTTTT+TGG | - | chr2_2:50024640-50024659 | Msa0255750:intron | 45.0% |
CGGAGTTTGATCAGGAGATA+AGG | - | chr2_2:50024803-50024822 | Msa0255750:intron | 45.0% | |
AGATACCGAAGTTTGGTACC+TGG | + | chr2_2:50024854-50024873 | None:intergenic | 45.0% | |
!!! | GAACCGTGTGTTGTTTTGAG+AGG | - | chr2_2:50025467-50025486 | Msa0255750:CDS | 45.0% |
GGACCTCTCAAAACAACACA+CGG | + | chr2_2:50025473-50025492 | None:intergenic | 45.0% | |
ATATTAGGATGTCCGACGCT+GGG | + | chr2_2:50025494-50025513 | None:intergenic | 45.0% | |
ACATCCTAATATCCGCTCAG+TGG | - | chr2_2:50025502-50025521 | Msa0255750:CDS | 45.0% | |
ATGAGGCAAAGGGAAAACAC+CGG | + | chr2_2:50025705-50025724 | None:intergenic | 45.0% | |
TGCAATTTCCGGAGTTTCCT+TGG | - | chr2_2:50025760-50025779 | Msa0255750:CDS | 45.0% | |
CGGAAGAAGCAATGGTTTCA+TGG | - | chr2_2:50025790-50025809 | Msa0255750:intron | 45.0% | |
CAAATGCAAGACACGCTGAT+GGG | - | chr2_2:50025912-50025931 | Msa0255750:intron | 45.0% | |
AAATGCAAGACACGCTGATG+GGG | - | chr2_2:50025913-50025932 | Msa0255750:intron | 45.0% | |
AAGGATTCCAGGCTGTAGTA+TGG | + | chr2_2:50026147-50026166 | None:intergenic | 45.0% | |
CATTGGAACAGAAGGATTCC+AGG | + | chr2_2:50026158-50026177 | None:intergenic | 45.0% | |
TTTGTGTGATGTGCCTTCCA+TGG | - | chr2_2:50026422-50026441 | Msa0255750:CDS | 45.0% | |
GTGCAAATATGGGTTTGCAG+AGG | - | chr2_2:50026571-50026590 | Msa0255750:CDS | 45.0% | |
GAGGAAACCTCAGGACATTT+CGG | + | chr2_2:50026617-50026636 | None:intergenic | 45.0% | |
CATCCAACACTTCCTATGCA+AGG | - | chr2_2:50026678-50026697 | Msa0255750:CDS | 45.0% | |
TGGCCTCTTATTCCTTGCAT+AGG | + | chr2_2:50026693-50026712 | None:intergenic | 45.0% | |
GAGGGTGAAAGCTGATATTG+TGG | + | chr2_2:50026713-50026732 | None:intergenic | 45.0% | |
CAATATCAGCTTTCACCCTC+CGG | - | chr2_2:50026713-50026732 | Msa0255750:CDS | 45.0% | |
CTAAATGAAGCTGCAGTTGC+CGG | + | chr2_2:50026735-50026754 | None:intergenic | 45.0% | |
AAAATCCGGAAGCCTGTTGA+TGG | + | chr2_2:50026840-50026859 | None:intergenic | 45.0% | |
CTATGTCCAAGCGCATATCT+CGG | + | chr2_2:50027083-50027102 | None:intergenic | 45.0% | |
AGATATGCGCTTGGACATAG+AGG | - | chr2_2:50027083-50027102 | Msa0255750:intron | 45.0% | |
ACTCCAGGATCTTCTTGCAT+TGG | - | chr2_2:50027500-50027519 | Msa0255750:intron | 45.0% | |
CTCCAGGATCTTCTTGCATT+GGG | - | chr2_2:50027501-50027520 | Msa0255750:intron | 45.0% | |
ATCTTCTTGCATTGGGTGAG+AGG | - | chr2_2:50027508-50027527 | Msa0255750:intron | 45.0% | |
!! | AAATCAGAAGCATTGGCTCC+TGG | - | chr2_2:50027908-50027927 | Msa0255750:intron | 45.0% |
TCCTGGAAGTGAAGATGCAT+AGG | - | chr2_2:50027925-50027944 | Msa0255750:intron | 45.0% | |
TCCTATGCATCTTCACTTCC+AGG | + | chr2_2:50027929-50027948 | None:intergenic | 45.0% | |
GAAGTGAAGATGCATAGGAG+AGG | - | chr2_2:50027930-50027949 | Msa0255750:intron | 45.0% | |
! | CCAGATTAAATGAGTTGGGC+AGG | + | chr2_2:50028083-50028102 | None:intergenic | 45.0% |
CCTGCCCAACTCATTTAATC+TGG | - | chr2_2:50028080-50028099 | Msa0255750:five_prime_UTR | 45.0% | |
GGTGCCCAGATTAAATGAGT+TGG | + | chr2_2:50028088-50028107 | None:intergenic | 45.0% | |
TTGTACAGGCTCTGTTCTGT+TGG | - | chr2_2:50028129-50028148 | Msa0255750:five_prime_UTR | 45.0% | |
TTACCGGAGAGAGAAAGCGA+GGG | + | chr2_2:50024273-50024292 | None:intergenic | 50.0% | |
ATTACCGGAGAGAGAAAGCG+AGG | + | chr2_2:50024274-50024293 | None:intergenic | 50.0% | |
GATAGGGATCAACAACGGCA+AGG | - | chr2_2:50025431-50025450 | Msa0255750:CDS | 50.0% | |
GATATTAGGATGTCCGACGC+TGG | + | chr2_2:50025495-50025514 | None:intergenic | 50.0% | |
GTCACCACTGAGCGGATATT+AGG | + | chr2_2:50025509-50025528 | None:intergenic | 50.0% | |
AACTGATCGGAGGCTCTATG+AGG | + | chr2_2:50025722-50025741 | None:intergenic | 50.0% | |
GGTTTCATGGATGACGCTAG+AGG | - | chr2_2:50025803-50025822 | Msa0255750:intron | 50.0% | |
ACGCTAGAGGTCCGTACAAA+AGG | - | chr2_2:50025816-50025835 | Msa0255750:intron | 50.0% | |
TCAGCGTGTCTTGCATTTGG+TGG | + | chr2_2:50025911-50025930 | None:intergenic | 50.0% | |
CCATCAGCGTGTCTTGCATT+TGG | + | chr2_2:50025914-50025933 | None:intergenic | 50.0% | |
CCAAATGCAAGACACGCTGA+TGG | - | chr2_2:50025911-50025930 | Msa0255750:intron | 50.0% | |
GTCCTACTCCAACAAGCGAA+GGG | + | chr2_2:50025976-50025995 | None:intergenic | 50.0% | |
CTTGTTGGAGTAGGACCACA+TGG | - | chr2_2:50025980-50025999 | Msa0255750:intron | 50.0% | |
! | TTCACTTGCTGGTCCAACCA+CGG | + | chr2_2:50026106-50026125 | None:intergenic | 50.0% |
ATGATGGCCATACTACAGCC+TGG | - | chr2_2:50026137-50026156 | Msa0255750:intron | 50.0% | |
!! | CAGAGGTATCATGACACAGC+TGG | - | chr2_2:50026588-50026607 | Msa0255750:CDS | 50.0% |
CTGGTAACCGAAATGTCCTG+AGG | - | chr2_2:50026607-50026626 | Msa0255750:CDS | 50.0% | |
!! | TTAGGGTGCTGTTGGTTGAC+AGG | + | chr2_2:50026651-50026670 | None:intergenic | 50.0% |
CCTCAAAACCAGTCTGTGGA+GGG | + | chr2_2:50026791-50026810 | None:intergenic | 50.0% | |
ATTGTCCCTGCACCATCAAC+AGG | - | chr2_2:50026825-50026844 | Msa0255750:CDS | 50.0% | |
! | TCCGGATTTTCCGACCTCAT+AGG | - | chr2_2:50026850-50026869 | Msa0255750:CDS | 50.0% |
GCCTATGAGGTCGGAAAATC+CGG | + | chr2_2:50026854-50026873 | None:intergenic | 50.0% | |
ACATCGAAGTCTACCTCCTG+TGG | - | chr2_2:50026896-50026915 | Msa0255750:CDS | 50.0% | |
CATCGAAGTCTACCTCCTGT+GGG | - | chr2_2:50026897-50026916 | Msa0255750:CDS | 50.0% | |
TCAACTTGGAAGAAGCCCAC+AGG | + | chr2_2:50026915-50026934 | None:intergenic | 50.0% | |
CACCCAATGCAAGAAGATCC+TGG | + | chr2_2:50027506-50027525 | None:intergenic | 50.0% | |
CTTGCATTGGGTGAGAGGAT+AGG | - | chr2_2:50027513-50027532 | Msa0255750:intron | 50.0% | |
TACCGGAGAGAGAAAGCGAG+GGG | + | chr2_2:50024272-50024291 | None:intergenic | 55.0% | |
!! | GGTCGGTGATGGTTTTTGGG+TGG | - | chr2_2:50024644-50024663 | Msa0255750:intron | 55.0% |
!!! | GTTTTGAGAGGTCCCAGCGT+CGG | - | chr2_2:50025479-50025498 | Msa0255750:CDS | 55.0% |
CTGAAGCAGTCACCACTGAG+CGG | + | chr2_2:50025517-50025536 | None:intergenic | 55.0% | |
GCTCAGTGGTGACTGCTTCA+GGG | - | chr2_2:50025516-50025535 | Msa0255750:CDS | 55.0% | |
CGGAGGCTCTATGAGGCAAA+GGG | + | chr2_2:50025715-50025734 | None:intergenic | 55.0% | |
TCGGAGGCTCTATGAGGCAA+AGG | + | chr2_2:50025716-50025735 | None:intergenic | 55.0% | |
GCTTGAACCGGGCAACTGAT+CGG | + | chr2_2:50025735-50025754 | None:intergenic | 55.0% | |
CGCTGATGGGGTTGCTATGA+TGG | - | chr2_2:50025925-50025944 | Msa0255750:intron | 55.0% | |
! | GTCCCTTCGCTTGTTGGAGT+AGG | - | chr2_2:50025971-50025990 | Msa0255750:intron | 55.0% |
GGTCCTACTCCAACAAGCGA+AGG | + | chr2_2:50025977-50025996 | None:intergenic | 55.0% | |
GTTGGAGTAGGACCACATGG+TGG | - | chr2_2:50025983-50026002 | Msa0255750:intron | 55.0% | |
! | TGTTGGTTGACAGGAGGAGG+CGG | + | chr2_2:50026642-50026661 | None:intergenic | 55.0% |
! | TGCTGTTGGTTGACAGGAGG+AGG | + | chr2_2:50026645-50026664 | None:intergenic | 55.0% |
ATGAAGCTGCAGTTGCCGGA+GGG | + | chr2_2:50026731-50026750 | None:intergenic | 55.0% | |
AATGAAGCTGCAGTTGCCGG+AGG | + | chr2_2:50026732-50026751 | None:intergenic | 55.0% | |
GTTCCACCAAATCCTCCACG+CGG | - | chr2_2:50026756-50026775 | Msa0255750:CDS | 55.0% | |
ACAGAACCGCGTGGAGGATT+TGG | + | chr2_2:50026765-50026784 | None:intergenic | 55.0% | |
TCTGTGATCCCTCCACAGAC+TGG | - | chr2_2:50026780-50026799 | Msa0255750:CDS | 55.0% | |
!!! | CCCTCCACAGACTGGTTTTG+AGG | - | chr2_2:50026788-50026807 | Msa0255750:CDS | 55.0% |
GCCTCAAAACCAGTCTGTGG+AGG | + | chr2_2:50026792-50026811 | None:intergenic | 55.0% | |
CCTGCCTCAAAACCAGTCTG+TGG | + | chr2_2:50026795-50026814 | None:intergenic | 55.0% | |
!!! | CCACAGACTGGTTTTGAGGC+AGG | - | chr2_2:50026792-50026811 | Msa0255750:CDS | 55.0% |
!!! | CTGGTTTTGAGGCAGGTCCT+AGG | - | chr2_2:50026799-50026818 | Msa0255750:CDS | 55.0% |
GGTGCAGGGACAATATGCCT+AGG | + | chr2_2:50026819-50026838 | None:intergenic | 55.0% | |
!! | GGAAGCCTGTTGATGGTGCA+GGG | + | chr2_2:50026833-50026852 | None:intergenic | 55.0% |
CTGCACCATCAACAGGCTTC+CGG | - | chr2_2:50026832-50026851 | Msa0255750:CDS | 55.0% | |
CTGGCATGAGCCTATGAGGT+CGG | + | chr2_2:50026863-50026882 | None:intergenic | 55.0% | |
GTCTCTGGCATGAGCCTATG+AGG | + | chr2_2:50026867-50026886 | None:intergenic | 55.0% | |
CTCATGCCAGAGACACCTCT+CGG | - | chr2_2:50026873-50026892 | Msa0255750:CDS | 55.0% | |
GGTAGACTTCGATGTCCGAG+AGG | + | chr2_2:50026891-50026910 | None:intergenic | 55.0% | |
ACTTGGAAGAAGCCCACAGG+AGG | + | chr2_2:50026912-50026931 | None:intergenic | 55.0% | |
CCAAGCGCATATCTCGGTGA+TGG | + | chr2_2:50027077-50027096 | None:intergenic | 55.0% | |
CCATCACCGAGATATGCGCT+TGG | - | chr2_2:50027074-50027093 | Msa0255750:intron | 55.0% | |
CTCCCCTCGCTTTCTCTCTC+CGG | - | chr2_2:50024267-50024286 | Msa0255750:three_prime_UTR | 60.0% | |
CGCTCAGTGGTGACTGCTTC+AGG | - | chr2_2:50025515-50025534 | Msa0255750:CDS | 60.0% | |
! | GAGATGGGCGTTGCAACTGC+AGG | - | chr2_2:50025641-50025660 | Msa0255750:CDS | 60.0% |
AGAGCCTCCGATCAGTTGCC+CGG | - | chr2_2:50025725-50025744 | Msa0255750:CDS | 60.0% | |
TGAACCGGGCAACTGATCGG+AGG | + | chr2_2:50025732-50025751 | None:intergenic | 60.0% | |
GAAGGGACGCGGAATGGCAA+TGG | + | chr2_2:50025959-50025978 | None:intergenic | 60.0% | |
ACAAGCGAAGGGACGCGGAA+TGG | + | chr2_2:50025965-50025984 | None:intergenic | 60.0% | |
TTCCGCGTCCCTTCGCTTGT+TGG | - | chr2_2:50025965-50025984 | Msa0255750:intron | 60.0% | |
CTCCAACAAGCGAAGGGACG+CGG | + | chr2_2:50025970-50025989 | None:intergenic | 60.0% | |
! | TAGGACCACATGGTGGTGCG+TGG | - | chr2_2:50025990-50026009 | Msa0255750:intron | 60.0% |
CTACTCCACGCACCACCATG+TGG | + | chr2_2:50025998-50026017 | None:intergenic | 60.0% | |
! | CACATGGTGGTGCGTGGAGT+AGG | - | chr2_2:50025996-50026015 | Msa0255750:intron | 60.0% |
GGGACAGCACTATCCACCAG+CGG | - | chr2_2:50026075-50026094 | Msa0255750:intron | 60.0% | |
! | ACTTGCTGGTCCAACCACGG+AGG | + | chr2_2:50026103-50026122 | None:intergenic | 60.0% |
!! | GGGTGCTGTTGGTTGACAGG+AGG | + | chr2_2:50026648-50026667 | None:intergenic | 60.0% |
GAACCGCGTGGAGGATTTGG+TGG | + | chr2_2:50026762-50026781 | None:intergenic | 60.0% | |
!! | CGGAAGCCTGTTGATGGTGC+AGG | + | chr2_2:50026834-50026853 | None:intergenic | 60.0% |
!! | CGATGTCCGAGAGGTGTCTC+TGG | + | chr2_2:50026882-50026901 | None:intergenic | 60.0% |
GGAGGCAGCTTCTGACGATC+AGG | - | chr2_2:50027626-50027645 | Msa0255750:intron | 60.0% | |
GGTGGTGCGTGGAGTAGGTC+AGG | - | chr2_2:50026001-50026020 | Msa0255750:intron | 65.0% | |
GAGGCGGAGGAGGAAACCTC+AGG | + | chr2_2:50026626-50026645 | None:intergenic | 65.0% | |
TTGACAGGAGGAGGCGGAGG+AGG | + | chr2_2:50026636-50026655 | None:intergenic | 65.0% | |
TGGTTGACAGGAGGAGGCGG+AGG | + | chr2_2:50026639-50026658 | None:intergenic | 65.0% | |
GGGATCACAGAACCGCGTGG+AGG | + | chr2_2:50026771-50026790 | None:intergenic | 65.0% | |
GGAGGGATCACAGAACCGCG+TGG | + | chr2_2:50026774-50026793 | None:intergenic | 65.0% | |
ATCCACCAGCGGCTCCTCCG+TGG | - | chr2_2:50026086-50026105 | Msa0255750:intron | 70.0% | |
AACCACGGAGGAGCCGCTGG+TGG | + | chr2_2:50026091-50026110 | None:intergenic | 70.0% | |
ACCAGCGGCTCCTCCGTGGT+TGG | - | chr2_2:50026090-50026109 | Msa0255750:intron | 70.0% | |
TCCAACCACGGAGGAGCCGC+TGG | + | chr2_2:50026094-50026113 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 50024166 | 50028179 | 50024166 | ID=Msa0255750;Name=Msa0255750 |
chr2_2 | mRNA | 50024166 | 50028179 | 50024166 | ID=Msa0255750-mRNA-1;Parent=Msa0255750;Name=Msa0255750-mRNA-1;_AED=0.20;_eAED=0.20;_QI=240|0.83|0.85|1|0.66|0.71|7|233|506 |
chr2_2 | exon | 50024166 | 50024545 | 50024166 | ID=Msa0255750-mRNA-1:exon:15100;Parent=Msa0255750-mRNA-1 |
chr2_2 | exon | 50024671 | 50024784 | 50024671 | ID=Msa0255750-mRNA-1:exon:15099;Parent=Msa0255750-mRNA-1 |
chr2_2 | exon | 50025226 | 50025309 | 50025226 | ID=Msa0255750-mRNA-1:exon:15098;Parent=Msa0255750-mRNA-1 |
chr2_2 | exon | 50025410 | 50025804 | 50025410 | ID=Msa0255750-mRNA-1:exon:15097;Parent=Msa0255750-mRNA-1 |
chr2_2 | exon | 50026155 | 50026965 | 50026155 | ID=Msa0255750-mRNA-1:exon:15096;Parent=Msa0255750-mRNA-1 |
chr2_2 | exon | 50027737 | 50027823 | 50027737 | ID=Msa0255750-mRNA-1:exon:15095;Parent=Msa0255750-mRNA-1 |
chr2_2 | exon | 50028057 | 50028179 | 50028057 | ID=Msa0255750-mRNA-1:exon:15094;Parent=Msa0255750-mRNA-1 |
chr2_2 | five_prime_UTR | 50028057 | 50028179 | 50028057 | ID=Msa0255750-mRNA-1:five_prime_utr;Parent=Msa0255750-mRNA-1 |
chr2_2 | five_prime_UTR | 50027737 | 50027823 | 50027737 | ID=Msa0255750-mRNA-1:five_prime_utr;Parent=Msa0255750-mRNA-1 |
chr2_2 | five_prime_UTR | 50026936 | 50026965 | 50026936 | ID=Msa0255750-mRNA-1:five_prime_utr;Parent=Msa0255750-mRNA-1 |
chr2_2 | CDS | 50026155 | 50026935 | 50026155 | ID=Msa0255750-mRNA-1:cds;Parent=Msa0255750-mRNA-1 |
chr2_2 | CDS | 50025410 | 50025804 | 50025410 | ID=Msa0255750-mRNA-1:cds;Parent=Msa0255750-mRNA-1 |
chr2_2 | CDS | 50025226 | 50025309 | 50025226 | ID=Msa0255750-mRNA-1:cds;Parent=Msa0255750-mRNA-1 |
chr2_2 | CDS | 50024671 | 50024784 | 50024671 | ID=Msa0255750-mRNA-1:cds;Parent=Msa0255750-mRNA-1 |
chr2_2 | CDS | 50024399 | 50024545 | 50024399 | ID=Msa0255750-mRNA-1:cds;Parent=Msa0255750-mRNA-1 |
chr2_2 | three_prime_UTR | 50024166 | 50024398 | 50024166 | ID=Msa0255750-mRNA-1:three_prime_utr;Parent=Msa0255750-mRNA-1 |
Gene Sequence |
Protein sequence |