AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0258430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258430 MtrunA17_Chr2g0320801 98.765 324 4 0 1 324 1 324 0.0 658
Msa0258430 MtrunA17_Chr7g0265751 64.537 313 82 6 1 292 1 305 6.36e-133 381
Msa0258430 MtrunA17_Chr1g0162821 65.614 285 91 1 1 285 1 278 1.20e-124 358
Msa0258430 MtrunA17_Chr2g0276901 34.375 128 75 2 57 175 1 128 5.52e-19 87.4
Msa0258430 MtrunA17_Chr2g0276891 55.102 49 22 0 9 57 184 232 1.67e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258430 AT5G42820.1 69.338 287 79 3 1 284 1 281 1.92e-131 376
Msa0258430 AT5G42820.2 69.338 287 79 3 1 284 1 281 1.92e-131 376
Msa0258430 AT1G27650.1 66.084 286 89 2 1 279 1 285 3.88e-124 358
Msa0258430 AT1G27650.2 60.593 236 85 2 51 279 1 235 7.56e-85 256
Msa0258430 AT1G10320.1 41.765 170 94 3 9 175 237 404 6.38e-39 146
Msa0258430 AT1G10320.2 41.765 170 94 3 9 175 228 395 6.70e-39 146
Msa0258430 AT3G44785.1 85.185 54 8 0 1 54 1 54 6.44e-29 106

Find 137 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGGTTGACAAGTATATT+TGG 0.119554 2_2:-54770372 Msa0258430:three_prime_UTR
CCACTTTCAACAGTTCTTAT+AGG 0.188358 2_2:-54770884 Msa0258430:three_prime_UTR
TCAAACTAGAGATGCAATTT+AGG 0.202464 2_2:+54771418 None:intergenic
ATAATTGGCTAGTTGGAAAA+AGG 0.220423 2_2:+54771026 None:intergenic
GGCGAGAAATCAACAATAAT+TGG 0.248460 2_2:+54772323 None:intergenic
CTTGGTTGACAAGTATATTT+GGG 0.255953 2_2:-54770371 Msa0258430:three_prime_UTR
CACTTTCAACAGTTCTTATA+GGG 0.286290 2_2:-54770883 Msa0258430:three_prime_UTR
TTAATCAAATGAAATCATTA+TGG 0.299731 2_2:+54770410 None:intergenic
TTTGATGAATTGTCTAAGTA+TGG 0.330686 2_2:-54773579 Msa0258430:CDS
AGCACGCGAGTGTTAATAAT+TGG 0.338794 2_2:+54771011 None:intergenic
GTGCCCGTTATGGCCATTAC+TGG 0.341601 2_2:+54771757 None:intergenic
AAGTGTAAGGATGACTATTT+AGG 0.353221 2_2:-54770622 Msa0258430:three_prime_UTR
GTGGTTATATTTGCATTTGC+TGG 0.356907 2_2:-54770977 Msa0258430:three_prime_UTR
GAATTGAGGCGTCAATTGTT+TGG 0.359369 2_2:-54772109 Msa0258430:CDS
TATCGATCCGAGGAAGATTC+AGG 0.363040 2_2:-54773631 Msa0258430:CDS
TATTGATCTGTCTTTACTAC+TGG 0.377018 2_2:-54771674 Msa0258430:intron
CGAGAATTGAGCAGTGGAAC+AGG 0.379353 2_2:-54771826 Msa0258430:CDS
ATAGTAGTCAAATATGTTAG+AGG 0.381997 2_2:-54771334 Msa0258430:three_prime_UTR
CTTCACGTGTGATGGTGATC+AGG 0.385412 2_2:+54770925 None:intergenic
CATTCATTCCTCTTCATCAA+TGG 0.385445 2_2:-54773853 Msa0258430:exon
TCTGTATTAACCTTACTTGT+GGG 0.387455 2_2:+54771785 None:intergenic
ATGCTATTTCCAATTTCAAA+AGG 0.395234 2_2:+54770837 None:intergenic
AGGAGAAAACTCATTATAGA+AGG 0.419931 2_2:+54770594 None:intergenic
TGCTCCTACTGTGCCTTTCG+TGG 0.422489 2_2:+54772080 None:intergenic
ACACCAGGAGTAATCATATC+AGG 0.425297 2_2:+54773672 None:intergenic
AGTGTTAATAATTGGCTAGT+TGG 0.427211 2_2:+54771019 None:intergenic
ACTCCTGGTGTTGATGTTCA+TGG 0.428345 2_2:-54773660 Msa0258430:CDS
GGAGGAATCGTAGTCCTGTC+AGG 0.428692 2_2:-54771871 Msa0258430:CDS
TATCATTGAAATTTGTGTAC+AGG 0.429259 2_2:-54770735 Msa0258430:three_prime_UTR
CTCTGTATTAACCTTACTTG+TGG 0.432993 2_2:+54771784 None:intergenic
TTCCGCTGTGCAGGTGGTGC+AGG 0.441004 2_2:-54771551 Msa0258430:intron
AAATGTTGGTGTATCTTCCT+TGG 0.442061 2_2:-54770389 Msa0258430:three_prime_UTR
TTTCTCCTGGTTGCAGGCTG+AGG 0.446204 2_2:-54770579 Msa0258430:three_prime_UTR
ATCAAAAGTCAGTCTTCAAT+AGG 0.447363 2_2:+54770488 None:intergenic
CTCCTTCCCCTTCTCCGTCC+AGG 0.455533 2_2:+54771923 None:intergenic
TCTTGAAGAGCAGTTTCAGC+TGG 0.464410 2_2:-54770652 Msa0258430:three_prime_UTR
TCAGTTCTAGATTGTTCTCA+TGG 0.469282 2_2:+54773967 None:intergenic
TGCTATTTCCAATTTCAAAA+GGG 0.475689 2_2:+54770838 None:intergenic
TGTTGATTTCTCGCCGGTGA+CGG 0.475826 2_2:-54772315 Msa0258430:CDS
CTACGATTCCTCCTTCCAAC+AGG 0.478132 2_2:+54771881 None:intergenic
TCATAGCTTCGATGTCTGTA+AGG 0.480825 2_2:+54772046 None:intergenic
TCATGAGAATCAGCAGCAAC+GGG 0.483117 2_2:-54771714 Msa0258430:CDS
TTGAATCGAAGAAGAGAAGA+GGG 0.484909 2_2:+54773882 None:intergenic
CCAACAAAAGTTATGAATAG+AGG 0.485090 2_2:+54771216 None:intergenic
AGCTGGGAAGTAAAAGTGTA+AGG 0.487033 2_2:-54770635 Msa0258430:three_prime_UTR
TTCAAGTCCTGGACGGAGAA+GGG 0.489573 2_2:-54771930 Msa0258430:CDS
GGCTTATGCTTGGCTTAGTG+TGG 0.492967 2_2:+54773727 None:intergenic
ACGAAAGGCACAGTAGGAGC+AGG 0.495855 2_2:-54772078 Msa0258430:CDS
AAACCAGTAATGGCCATAAC+GGG 0.496188 2_2:-54771760 Msa0258430:CDS
ATGGCTTGACTCTTAGATGC+AGG 0.497424 2_2:+54770773 None:intergenic
TTGAGCAGTGGAACAGGGAA+AGG 0.500758 2_2:-54771820 Msa0258430:CDS
GCTCCGATCTTGAAGTAGAA+TGG 0.500982 2_2:+54773780 None:intergenic
ATGATGACAGAGACAGAGAC+AGG 0.502116 2_2:-54771991 Msa0258430:CDS
GATAACTGCAATTAACTCAA+TGG 0.502876 2_2:+54770754 None:intergenic
ATTTATAATGACGGCAAGAA+GGG 0.504873 2_2:+54771249 None:intergenic
CTTCAAGTCCTGGACGGAGA+AGG 0.506232 2_2:-54771931 Msa0258430:CDS
AGCAGCAACGGGAATCTCCT+CGG 0.506550 2_2:-54771703 Msa0258430:CDS
CGCGTGCTTGCTTGTTATCG+TGG 0.507909 2_2:-54770996 Msa0258430:three_prime_UTR
GAAACCAGTAATGGCCATAA+CGG 0.510544 2_2:-54771761 Msa0258430:CDS
TGCACTTGAAAAGAATTAGC+AGG 0.510770 2_2:-54772223 Msa0258430:intron
AGAGAAGGAACCCACAAGTA+AGG 0.511488 2_2:-54771795 Msa0258430:CDS
GCAGCAACGGGAATCTCCTC+GGG 0.512228 2_2:-54771702 Msa0258430:CDS
GAACAGGGAAAGGGAAGAGA+AGG 0.512985 2_2:-54771810 Msa0258430:CDS
TATTAGAGAGGAGGATCGTA+GGG 0.513701 2_2:+54773706 None:intergenic
GCCTCACGAAAGTCCGTCAC+CGG 0.516100 2_2:+54772302 None:intergenic
GGCTACCTGCAGGCAGTATG+AGG 0.520145 2_2:-54772282 Msa0258430:CDS
ATTTCAAAAGGGTTGAAACA+TGG 0.521099 2_2:+54770849 None:intergenic
TTTAGGAACGTTGCATAAAG+TGG 0.521801 2_2:+54771435 None:intergenic
GCATTGTGTTCAGGGAATTG+AGG 0.523927 2_2:-54772123 Msa0258430:intron
CCTATAAGAACTGTTGAAAG+TGG 0.530774 2_2:+54770884 None:intergenic
TCCTCGCTACCATCCCTGAC+AGG 0.535328 2_2:+54771857 None:intergenic
AAATGATCCTGAATCTTCCT+CGG 0.536629 2_2:+54773624 None:intergenic
GATTTCATTTGATTAAATGT+TGG 0.538577 2_2:-54770403 Msa0258430:three_prime_UTR
ATATTAGAGAGGAGGATCGT+AGG 0.544644 2_2:+54773705 None:intergenic
ATGTTCCGCCATTGATGAAG+AGG 0.544710 2_2:+54773845 None:intergenic
GGCACAGTAGGAGCAGGAGC+AGG 0.549754 2_2:-54772072 Msa0258430:CDS
AATTTATAATGACGGCAAGA+AGG 0.550011 2_2:+54771248 None:intergenic
ATCATGAGAATCAGCAGCAA+CGG 0.551987 2_2:-54771715 Msa0258430:CDS
CTTGAAGAGCAGTTTCAGCT+GGG 0.552000 2_2:-54770651 Msa0258430:three_prime_UTR
TGTGTATGTTCAGTTTAGAG+AGG 0.556449 2_2:-54773241 Msa0258430:CDS
TGAATCTTCCTCGGATCGAT+AGG 0.558270 2_2:+54773633 None:intergenic
AATGCTGTTAAGAATCTCAC+TGG 0.558427 2_2:-54773204 Msa0258430:CDS
AGTCGCAGTCGAAGTCCTGT+TGG 0.558621 2_2:-54771896 Msa0258430:CDS
CGTCTGTATAATTGTTACTG+AGG 0.561565 2_2:-54770446 Msa0258430:three_prime_UTR
TTCACGTGTGATGGTGATCA+GGG 0.561654 2_2:+54770926 None:intergenic
CGTCCTGATATGATTACTCC+TGG 0.564634 2_2:-54773675 Msa0258430:CDS
ATCATCACGACAGTGATAGC+AGG 0.569349 2_2:-54771964 Msa0258430:CDS
ATTGAATCGAAGAAGAGAAG+AGG 0.569830 2_2:+54773881 None:intergenic
AGGATCGTAGGGCTTATGCT+TGG 0.570022 2_2:+54773717 None:intergenic
GGTTAAGCATACGCTGTTGG+AGG 0.570107 2_2:-54770714 Msa0258430:three_prime_UTR
AGACGCAGGACTTCAAGTCC+TGG 0.570258 2_2:-54771941 Msa0258430:CDS
TGTCCATTCTACTTCAAGAT+CGG 0.570630 2_2:-54773783 Msa0258430:CDS
ATTCTCCTCATACTGCCTGC+AGG 0.573391 2_2:+54772277 None:intergenic
GCAACGGGAATCTCCTCGGG+AGG 0.573485 2_2:-54771699 Msa0258430:CDS
GTCTTAGTCTTCACGTGTGA+TGG 0.574252 2_2:+54770917 None:intergenic
ACAGGACTTCGACTGCGACT+AGG 0.576849 2_2:+54771899 None:intergenic
ACAGGTTAAGCATACGCTGT+TGG 0.597405 2_2:-54770717 Msa0258430:three_prime_UTR
TCCTGTCAGGGATGGTAGCG+AGG 0.599148 2_2:-54771858 Msa0258430:CDS
TCAAGTCCTGGACGGAGAAG+GGG 0.603608 2_2:-54771929 Msa0258430:CDS
TGAGCAGTGGAACAGGGAAA+GGG 0.605591 2_2:-54771819 Msa0258430:CDS
TGTTTGGAAAGCGCCACGAA+AGG 0.607382 2_2:-54772093 Msa0258430:CDS
TGATAATCTCGCTGATCACA+TGG 0.609267 2_2:-54773532 Msa0258430:intron
TGGCTTGACTCTTAGATGCA+GGG 0.609300 2_2:+54770774 None:intergenic
GCAGTCGAAGTCCTGTTGGA+AGG 0.609805 2_2:-54771892 Msa0258430:CDS
AATTATTGTTGATTTCTCGC+CGG 0.610789 2_2:-54772321 Msa0258430:CDS
AATCGTAGTCCTGTCAGGGA+TGG 0.612435 2_2:-54771866 Msa0258430:CDS
ACTTTCGTGAGGCTACCTGC+AGG 0.614398 2_2:-54772292 Msa0258430:CDS
TCATTCCTCTTCATCAATGG+CGG 0.619179 2_2:-54773850 Msa0258430:exon
AATACAGAGGAAACCAGTAA+TGG 0.620341 2_2:-54771770 Msa0258430:CDS
GCCGGTGACGGACTTTCGTG+AGG 0.622851 2_2:-54772303 Msa0258430:CDS
AGCGCCACGAAAGGCACAGT+AGG 0.625915 2_2:-54772084 Msa0258430:CDS
TTACAGACATCGAAGCTATG+AGG 0.626441 2_2:-54772044 Msa0258430:CDS
GAGGAATCGTAGTCCTGTCA+GGG 0.630704 2_2:-54771870 Msa0258430:CDS
GTCGAAGTCCTGTTGGAAGG+AGG 0.630939 2_2:-54771889 Msa0258430:CDS
GACATCGAAGCTATGAGGAG+AGG 0.631190 2_2:-54772039 Msa0258430:CDS
AGGTACACTGTTCCATGATG+TGG 0.644974 2_2:-54771531 Msa0258430:three_prime_UTR
GCTGATACATATTAGAGAGG+AGG 0.646319 2_2:+54773697 None:intergenic
GACGTGCGAGAATTGAGCAG+TGG 0.650018 2_2:-54771832 Msa0258430:CDS
GACGCTGATACATATTAGAG+AGG 0.652662 2_2:+54773694 None:intergenic
GAGGAGAATACTTGCAACCG+TGG 0.652968 2_2:-54772263 Msa0258430:CDS
CACAAGTAAGGTTAATACAG+AGG 0.653053 2_2:-54771783 Msa0258430:CDS
CCAAATATACTTGTCAACCA+AGG 0.656565 2_2:+54770372 None:intergenic
TTGGTTGACAAGTATATTTG+GGG 0.660531 2_2:-54770370 Msa0258430:three_prime_UTR
GAGAATTGAGCAGTGGAACA+GGG 0.660915 2_2:-54771825 Msa0258430:CDS
AAGATCGGAGCATGTCGACA+CGG 0.663894 2_2:-54773768 Msa0258430:CDS
TGTCCATGAACATCAACACC+AGG 0.664950 2_2:+54773657 None:intergenic
ACAGTGATAGCAGGAGACGC+AGG 0.667375 2_2:-54771955 Msa0258430:CDS
GTCCTGGACGGAGAAGGGGA+AGG 0.667415 2_2:-54771925 Msa0258430:CDS
ACAGATCAATATCCCTCCCG+AGG 0.670159 2_2:+54771686 None:intergenic
CAACGGGAATCTCCTCGGGA+GGG 0.671228 2_2:-54771698 Msa0258430:CDS
TGATGACAGAGACAGAGACA+GGG 0.672868 2_2:-54771990 Msa0258430:CDS
GCAGGACTTCAAGTCCTGGA+CGG 0.684119 2_2:-54771937 Msa0258430:CDS
AGTAGAATGGACAGTTAACG+CGG 0.690073 2_2:+54773793 None:intergenic
ATGGACAACCTATCGATCCG+AGG 0.695643 2_2:-54773641 Msa0258430:CDS
GAGAATACTTGCAACCGTGG+TGG 0.696644 2_2:-54772260 Msa0258430:CDS
TTACTGCTACGACTGCGATG+AGG 0.703201 2_2:+54772016 None:intergenic
TGAAGTTGCAATAACCACCA+CGG 0.740505 2_2:+54772246 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACAAAAAATTTATAATGA+TGG + chr2_2:54773181-54773200 None:intergenic 10.0%
!! TGATTTAATTGAATTAATAC+TGG - chr2_2:54770928-54770947 Msa0258430:three_prime_UTR 15.0%
!!! TTATGATTTTTTGTTTTTTC+AGG - chr2_2:54771032-54771051 Msa0258430:three_prime_UTR 15.0%
!! ATTGGTTAAAAAAAAAAAAC+TGG + chr2_2:54771581-54771600 None:intergenic 15.0%
!! TAACCAAAAATTTATAATGA+CGG + chr2_2:54773066-54773085 None:intergenic 15.0%
!! TTAATCAAATGAAATCATTA+TGG + chr2_2:54773896-54773915 None:intergenic 15.0%
!! TGTAATGTAATTACATATAC+CGG + chr2_2:54770892-54770911 None:intergenic 20.0%
!!! TTTTTTTTTCTTCCACAAAA+AGG + chr2_2:54773253-54773272 None:intergenic 20.0%
!!! GATGTTTTAATGGATTTTTA+AGG - chr2_2:54773611-54773630 Msa0258430:CDS 20.0%
!! GATTTCATTTGATTAAATGT+TGG - chr2_2:54773900-54773919 Msa0258430:five_prime_UTR 20.0%
!!! GAACATTTAGCTTCAATTTT+CGG - chr2_2:54770475-54770494 Msa0258430:three_prime_UTR 25.0%
!!! TCATTTTGAAGAGTTTTATG+AGG - chr2_2:54770696-54770715 Msa0258430:three_prime_UTR 25.0%
! TTTGATGAATTGTCTAAGTA+TGG - chr2_2:54770724-54770743 Msa0258430:three_prime_UTR 25.0%
!!! GATTTTTTGTTTTTTCAGGT+TGG - chr2_2:54771036-54771055 Msa0258430:three_prime_UTR 25.0%
!!! TGTGTTTGTGTGTATTTTTT+GGG - chr2_2:54771239-54771258 Msa0258430:three_prime_UTR 25.0%
! ATGTATGTATGTACTTGTAT+AGG - chr2_2:54771280-54771299 Msa0258430:three_prime_UTR 25.0%
! TGTATGTATGTACTTGTATA+GGG - chr2_2:54771281-54771300 Msa0258430:three_prime_UTR 25.0%
! TACAAAATGTTGTCAAATAG+TGG - chr2_2:54771696-54771715 Msa0258430:CDS 25.0%
! AAAATACCTAAACCACAAAA+GGG + chr2_2:54772131-54772150 None:intergenic 25.0%
! AAAAATACCTAAACCACAAA+AGG + chr2_2:54772132-54772151 None:intergenic 25.0%
!!! GGTATTTTTTAACTAAACGT+TGG - chr2_2:54772143-54772162 Msa0258430:intron 25.0%
!! TTTGCATATTCCTATAGTTT+TGG - chr2_2:54772670-54772689 Msa0258430:intron 25.0%
!! TTGCATATTCCTATAGTTTT+GGG - chr2_2:54772671-54772690 Msa0258430:intron 25.0%
! ACAAATGAAAAAAATCCCAA+GGG + chr2_2:54772813-54772832 None:intergenic 25.0%
! AACAAATGAAAAAAATCCCA+AGG + chr2_2:54772814-54772833 None:intergenic 25.0%
! ATAGTAGTCAAATATGTTAG+AGG - chr2_2:54772969-54772988 Msa0258430:intron 25.0%
!! TTGCCGTCATTATAAATTTT+TGG - chr2_2:54773060-54773079 Msa0258430:intron 25.0%
! ATTTATAATGATGGCAAGAA+GGG + chr2_2:54773172-54773191 None:intergenic 25.0%
! AATTTATAATGATGGCAAGA+AGG + chr2_2:54773173-54773192 None:intergenic 25.0%
!! GTTAAATATTGACCTTTTTG+TGG - chr2_2:54773238-54773257 Msa0258430:CDS 25.0%
!!! TGCTATTTCCAATTTCAAAA+GGG + chr2_2:54773468-54773487 None:intergenic 25.0%
!!! ATGCTATTTCCAATTTCAAA+AGG + chr2_2:54773469-54773488 None:intergenic 25.0%
!! TACATATTTATGAGTTTTGC+AGG - chr2_2:54773497-54773516 Msa0258430:intron 25.0%
! TATCATTGAAATTTGTGTAC+AGG - chr2_2:54773568-54773587 Msa0258430:CDS 25.0%
!!! CTTTAATTTTCTTTTTCTCG+TGG - chr2_2:54773754-54773773 Msa0258430:CDS 25.0%
! TTTTTGGATGTTAGGATTTG+TGG + chr2_2:54770400-54770419 None:intergenic 30.0%
!!! GTTTTGATTCTGTTGTGATT+TGG - chr2_2:54771009-54771028 Msa0258430:three_prime_UTR 30.0%
!!! GTGTGTTTGTGTGTATTTTT+TGG - chr2_2:54771238-54771257 Msa0258430:three_prime_UTR 30.0%
ATGATAGTACTATTGCATAG+CGG - chr2_2:54771439-54771458 Msa0258430:three_prime_UTR 30.0%
TTGTTAAACAGCAGTTATAG+TGG - chr2_2:54771611-54771630 Msa0258430:intron 30.0%
GATATAGTGCTATAGCTTAT+CGG - chr2_2:54771635-54771654 Msa0258430:intron 30.0%
CTAAATCAAATTCTCAACTC+AGG + chr2_2:54771843-54771862 None:intergenic 30.0%
! GAGTTGAGAATTTGATTTAG+AGG - chr2_2:54771843-54771862 Msa0258430:CDS 30.0%
GCCAAATCCTTTATTATAGA+CGG - chr2_2:54771867-54771886 Msa0258430:CDS 30.0%
CCAAATCCTTTATTATAGAC+GGG - chr2_2:54771868-54771887 Msa0258430:CDS 30.0%
AACAGATAATAGCACGAAAT+TGG + chr2_2:54771897-54771916 None:intergenic 30.0%
!! AATTATTGTTGATTTCTCGC+CGG - chr2_2:54771982-54772001 Msa0258430:CDS 30.0%
TTTAACATGCATTGTGTTCA+GGG - chr2_2:54772172-54772191 Msa0258430:intron 30.0%
TCTGTATTAACCTTACTTGT+GGG + chr2_2:54772521-54772540 None:intergenic 30.0%
TATTGATCTGTCTTTACTAC+TGG - chr2_2:54772629-54772648 Msa0258430:intron 30.0%
AAATGAAAAAAATCCCAAGG+GGG + chr2_2:54772811-54772830 None:intergenic 30.0%
CAAATGAAAAAAATCCCAAG+GGG + chr2_2:54772812-54772831 None:intergenic 30.0%
TCAAACTAGAGATGCAATTT+AGG + chr2_2:54772888-54772907 None:intergenic 30.0%
! TATTTTCAGATGAACTGCAT+TGG + chr2_2:54773023-54773042 None:intergenic 30.0%
ATTTATAATGACGGCAAGAA+GGG + chr2_2:54773057-54773076 None:intergenic 30.0%
AATTTATAATGACGGCAAGA+AGG + chr2_2:54773058-54773077 None:intergenic 30.0%
CCAACAAAAGTTATGAATAG+AGG + chr2_2:54773090-54773109 None:intergenic 30.0%
! CCTCTATTCATAACTTTTGT+TGG - chr2_2:54773087-54773106 Msa0258430:intron 30.0%
! ATTTTCAGATGAACATGCAT+TGG + chr2_2:54773137-54773156 None:intergenic 30.0%
CCAACAAAAGTTATGAATAG+AGG + chr2_2:54773090-54773109 None:intergenic 30.0%
! CCTCTATTCATAACTTTTGT+TGG - chr2_2:54773087-54773106 Msa0258430:intron 30.0%
! TAATTGGCTAGTTGGAAAAA+GGG + chr2_2:54773279-54773298 None:intergenic 30.0%
! ATAATTGGCTAGTTGGAAAA+AGG + chr2_2:54773280-54773299 None:intergenic 30.0%
AGTGTTAATAATTGGCTAGT+TGG + chr2_2:54773287-54773306 None:intergenic 30.0%
!! TGTGTTATTCTTTTACAGTC+AGG - chr2_2:54773352-54773371 Msa0258430:intron 30.0%
!! GTGTTATTCTTTTACAGTCA+GGG - chr2_2:54773353-54773372 Msa0258430:intron 30.0%
CACTTTCAACAGTTCTTATA+GGG - chr2_2:54773420-54773439 Msa0258430:intron 30.0%
ATTTCAAAAGGGTTGAAACA+TGG + chr2_2:54773457-54773476 None:intergenic 30.0%
!!! TGTTTCAACCCTTTTGAAAT+TGG - chr2_2:54773457-54773476 Msa0258430:intron 30.0%
! ATTTATGAGTTTTGCAGGTT+CGG - chr2_2:54773502-54773521 Msa0258430:intron 30.0%
GATAACTGCAATTAACTCAA+TGG + chr2_2:54773552-54773571 None:intergenic 30.0%
AAGTGTAAGGATGACTATTT+AGG - chr2_2:54773681-54773700 Msa0258430:CDS 30.0%
AGGAGAAAACTCATTATAGA+AGG + chr2_2:54773712-54773731 None:intergenic 30.0%
! TTCTATAATGAGTTTTCTCC+TGG - chr2_2:54773711-54773730 Msa0258430:CDS 30.0%
ATCAAAAGTCAGTCTTCAAT+AGG + chr2_2:54773818-54773837 None:intergenic 30.0%
CTTGGTTGACAAGTATATTT+GGG - chr2_2:54773932-54773951 Msa0258430:five_prime_UTR 30.0%
TTGGTTGACAAGTATATTTG+GGG - chr2_2:54773933-54773952 Msa0258430:five_prime_UTR 30.0%
!! TGGATTTTGTAGTGATGATG+GGG + chr2_2:54770380-54770399 None:intergenic 35.0%
! GTGGATTTTGTAGTGATGAT+GGG + chr2_2:54770381-54770400 None:intergenic 35.0%
! TGTGGATTTTGTAGTGATGA+TGG + chr2_2:54770382-54770401 None:intergenic 35.0%
!! AAGAGGGATTTTTGGATGTT+AGG + chr2_2:54770408-54770427 None:intergenic 35.0%
! AAGAAGAGAAGAGGGATTTT+TGG + chr2_2:54770416-54770435 None:intergenic 35.0%
TTGAATCGAAGAAGAGAAGA+GGG + chr2_2:54770424-54770443 None:intergenic 35.0%
ATTGAATCGAAGAAGAGAAG+AGG + chr2_2:54770425-54770444 None:intergenic 35.0%
CATTCATTCCTCTTCATCAA+TGG - chr2_2:54770450-54770469 Msa0258430:three_prime_UTR 35.0%
TGTCCATTCTACTTCAAGAT+CGG - chr2_2:54770520-54770539 Msa0258430:three_prime_UTR 35.0%
AAATGATCCTGAATCTTCCT+CGG + chr2_2:54770682-54770701 None:intergenic 35.0%
TGTGTATGTTCAGTTTAGAG+AGG - chr2_2:54771062-54771081 Msa0258430:three_prime_UTR 35.0%
AATGCTGTTAAGAATCTCAC+TGG - chr2_2:54771099-54771118 Msa0258430:intron 35.0%
! GAACCAGTGTTGTTAAATAG+CGG - chr2_2:54771415-54771434 Msa0258430:three_prime_UTR 35.0%
TAGTCACTGTTTCACAATAG+CGG + chr2_2:54771477-54771496 None:intergenic 35.0%
TGTGGAGGAATTTGAACAAA+CGG - chr2_2:54771517-54771536 Msa0258430:three_prime_UTR 35.0%
TTTAACAACACTGGTCACAT+TGG + chr2_2:54771599-54771618 None:intergenic 35.0%
! TAACTGCTGTTTAACAACAC+TGG + chr2_2:54771608-54771627 None:intergenic 35.0%
TTGTCAAATAGTGGCTATAG+CGG - chr2_2:54771705-54771724 Msa0258430:CDS 35.0%
CCCGTCTATAATAAAGGATT+TGG + chr2_2:54771871-54771890 None:intergenic 35.0%
TGGATACCCGTCTATAATAA+AGG + chr2_2:54771877-54771896 None:intergenic 35.0%
GGCGAGAAATCAACAATAAT+TGG + chr2_2:54771983-54772002 None:intergenic 35.0%
TGCACTTGAAAAGAATTAGC+AGG - chr2_2:54772080-54772099 Msa0258430:CDS 35.0%
GCAGGTAATATTTCCAACAT+TGG - chr2_2:54772098-54772117 Msa0258430:CDS 35.0%
GTTTAACATGCATTGTGTTC+AGG - chr2_2:54772171-54772190 Msa0258430:intron 35.0%
CTCTGTATTAACCTTACTTG+TGG + chr2_2:54772522-54772541 None:intergenic 35.0%
CACAAGTAAGGTTAATACAG+AGG - chr2_2:54772520-54772539 Msa0258430:intron 35.0%
AATACAGAGGAAACCAGTAA+TGG - chr2_2:54772533-54772552 Msa0258430:intron 35.0%
AAACTGTTGCCCAAAACTAT+AGG + chr2_2:54772683-54772702 None:intergenic 35.0%
AATGAAAAAAATCCCAAGGG+GGG + chr2_2:54772810-54772829 None:intergenic 35.0%
TTTAGGAACGTTGCATAAAG+TGG + chr2_2:54772871-54772890 None:intergenic 35.0%
!! GTTTCCTTGCATTTTTCAGT+AGG - chr2_2:54772941-54772960 Msa0258430:intron 35.0%
AAAGCCTACTGAAAAATGCA+AGG + chr2_2:54772948-54772967 None:intergenic 35.0%
! AATTGGCTAGTTGGAAAAAG+GGG + chr2_2:54773278-54773297 None:intergenic 35.0%
GTGGTTATATTTGCATTTGC+TGG - chr2_2:54773326-54773345 Msa0258430:intron 35.0%
CCTATAAGAACTGTTGAAAG+TGG + chr2_2:54773422-54773441 None:intergenic 35.0%
CCACTTTCAACAGTTCTTAT+AGG - chr2_2:54773419-54773438 Msa0258430:intron 35.0%
! TTTATGAGTTTTGCAGGTTC+GGG - chr2_2:54773503-54773522 Msa0258430:intron 35.0%
!! TGAAGACTGACTTTTGATCT+CGG - chr2_2:54773820-54773839 Msa0258430:CDS 35.0%
CGTCTGTATAATTGTTACTG+AGG - chr2_2:54773857-54773876 Msa0258430:five_prime_UTR 35.0%
AAATGTTGGTGTATCTTCCT+TGG - chr2_2:54773914-54773933 Msa0258430:five_prime_UTR 35.0%
CCAAATATACTTGTCAACCA+AGG + chr2_2:54773934-54773953 None:intergenic 35.0%
CCTTGGTTGACAAGTATATT+TGG - chr2_2:54773931-54773950 Msa0258430:five_prime_UTR 35.0%
TCATTCCTCTTCATCAATGG+CGG - chr2_2:54770453-54770472 Msa0258430:three_prime_UTR 40.0%
AGTAGAATGGACAGTTAACG+CGG + chr2_2:54770513-54770532 None:intergenic 40.0%
TATTAGAGAGGAGGATCGTA+GGG + chr2_2:54770600-54770619 None:intergenic 40.0%
ATATTAGAGAGGAGGATCGT+AGG + chr2_2:54770601-54770620 None:intergenic 40.0%
GCTGATACATATTAGAGAGG+AGG + chr2_2:54770609-54770628 None:intergenic 40.0%
GACGCTGATACATATTAGAG+AGG + chr2_2:54770612-54770631 None:intergenic 40.0%
ACACCAGGAGTAATCATATC+AGG + chr2_2:54770634-54770653 None:intergenic 40.0%
TGATAATCTCGCTGATCACA+TGG - chr2_2:54770771-54770790 Msa0258430:three_prime_UTR 40.0%
! CTCACTGGAAGATTTTATGC+TGG - chr2_2:54771114-54771133 Msa0258430:intron 40.0%
ATGCCGCTATTTAACAACAC+TGG + chr2_2:54771421-54771440 None:intergenic 40.0%
! TCAGTGATATAGCTCTGTTG+TGG - chr2_2:54771499-54771518 Msa0258430:three_prime_UTR 40.0%
CACATCAGTGTTGTCAATTG+CGG + chr2_2:54771557-54771576 None:intergenic 40.0%
TGCAAGCATGGAAGAAGAAA+AGG + chr2_2:54771954-54771973 None:intergenic 40.0%
! TTTTCTTCTTCCATGCTTGC+AGG - chr2_2:54771953-54771972 Msa0258430:CDS 40.0%
TGAAGTTGCAATAACCACCA+CGG + chr2_2:54772060-54772079 None:intergenic 40.0%
AAAGGGTTACTGACCAATGT+TGG + chr2_2:54772114-54772133 None:intergenic 40.0%
! ATTGGTCAGTAACCCTTTTG+TGG - chr2_2:54772116-54772135 Msa0258430:intron 40.0%
! CAGTAACCCTTTTGTGGTTT+AGG - chr2_2:54772122-54772141 Msa0258430:intron 40.0%
! GAATTGAGGCGTCAATTGTT+TGG - chr2_2:54772194-54772213 Msa0258430:intron 40.0%
TCATAGCTTCGATGTCTGTA+AGG + chr2_2:54772260-54772279 None:intergenic 40.0%
TTACAGACATCGAAGCTATG+AGG - chr2_2:54772259-54772278 Msa0258430:CDS 40.0%
GAAACCAGTAATGGCCATAA+CGG - chr2_2:54772542-54772561 Msa0258430:intron 40.0%
AAACCAGTAATGGCCATAAC+GGG - chr2_2:54772543-54772562 Msa0258430:intron 40.0%
ATCATGAGAATCAGCAGCAA+CGG - chr2_2:54772588-54772607 Msa0258430:intron 40.0%
GGAATATGCAAACAAGAGAG+TGG + chr2_2:54772662-54772681 None:intergenic 40.0%
GTGAGCTATACTTGTTCTGT+GGG + chr2_2:54772724-54772743 None:intergenic 40.0%
AGCACGCGAGTGTTAATAAT+TGG + chr2_2:54773295-54773314 None:intergenic 40.0%
!! GCTGTTGGAGGATGTTTTAA+TGG - chr2_2:54773601-54773620 Msa0258430:CDS 40.0%
! AGCTGGGAAGTAAAAGTGTA+AGG - chr2_2:54773668-54773687 Msa0258430:CDS 40.0%
! TCTTTTTCTCGTGGCATGTT+AGG - chr2_2:54773763-54773782 Msa0258430:CDS 40.0%
ATGTTCCGCCATTGATGAAG+AGG + chr2_2:54770461-54770480 None:intergenic 45.0%
GCTCCGATCTTGAAGTAGAA+TGG + chr2_2:54770526-54770545 None:intergenic 45.0%
CGTCCTGATATGATTACTCC+TGG - chr2_2:54770628-54770647 Msa0258430:three_prime_UTR 45.0%
!! ACTCCTGGTGTTGATGTTCA+TGG - chr2_2:54770643-54770662 Msa0258430:three_prime_UTR 45.0%
TGTCCATGAACATCAACACC+AGG + chr2_2:54770649-54770668 None:intergenic 45.0%
TGAATCTTCCTCGGATCGAT+AGG + chr2_2:54770673-54770692 None:intergenic 45.0%
TATCGATCCGAGGAAGATTC+AGG - chr2_2:54770672-54770691 Msa0258430:three_prime_UTR 45.0%
! GCACCTTCAATCAGAAGTGT+CGG + chr2_2:54770837-54770856 None:intergenic 45.0%
! GTGATATAGCTCTGTTGTGG+AGG - chr2_2:54771502-54771521 Msa0258430:three_prime_UTR 45.0%
GCATTGTGTTCAGGGAATTG+AGG - chr2_2:54772180-54772199 Msa0258430:intron 45.0%
ATGATGACAGAGACAGAGAC+AGG - chr2_2:54772312-54772331 Msa0258430:CDS 45.0%
TGATGACAGAGACAGAGACA+GGG - chr2_2:54772313-54772332 Msa0258430:CDS 45.0%
ATCATCACGACAGTGATAGC+AGG - chr2_2:54772339-54772358 Msa0258430:intron 45.0%
GAGAATTGAGCAGTGGAACA+GGG - chr2_2:54772478-54772497 Msa0258430:intron 45.0%
AGAGAAGGAACCCACAAGTA+AGG - chr2_2:54772508-54772527 Msa0258430:intron 45.0%
! CATTTTGTGAGTGCCCGTTA+TGG + chr2_2:54772559-54772578 None:intergenic 45.0%
TCATGAGAATCAGCAGCAAC+GGG - chr2_2:54772589-54772608 Msa0258430:intron 45.0%
AGCTATACTTGTTCTGTGGG+TGG + chr2_2:54772721-54772740 None:intergenic 45.0%
GGTGAGCTATACTTGTTCTG+TGG + chr2_2:54772725-54772744 None:intergenic 45.0%
AGGTACACTGTTCCATGATG+TGG - chr2_2:54772772-54772791 Msa0258430:intron 45.0%
AAAAAAATCCCAAGGGGGGA+GGG + chr2_2:54772806-54772825 None:intergenic 45.0%
! TTCACGTGTGATGGTGATCA+GGG + chr2_2:54773380-54773399 None:intergenic 45.0%
! GTCTTAGTCTTCACGTGTGA+TGG + chr2_2:54773389-54773408 None:intergenic 45.0%
TGGCTTGACTCTTAGATGCA+GGG + chr2_2:54773532-54773551 None:intergenic 45.0%
ATGGCTTGACTCTTAGATGC+AGG + chr2_2:54773533-54773552 None:intergenic 45.0%
ACAGGTTAAGCATACGCTGT+TGG - chr2_2:54773586-54773605 Msa0258430:CDS 45.0%
TCTTGAAGAGCAGTTTCAGC+TGG - chr2_2:54773651-54773670 Msa0258430:CDS 45.0%
CTTGAAGAGCAGTTTCAGCT+GGG - chr2_2:54773652-54773671 Msa0258430:CDS 45.0%
! ATGAGTTTTCTCCTGGTTGC+AGG - chr2_2:54773718-54773737 Msa0258430:CDS 45.0%
!!! TGATTTATTTTTATTTTTTT+AGG - chr2_2:54770975-54770994 Msa0258430:three_prime_UTR 5.0%
!!! GATTTATTTTTATTTTTTTA+GGG - chr2_2:54770976-54770995 Msa0258430:three_prime_UTR 5.0%
AAGATCGGAGCATGTCGACA+CGG - chr2_2:54770535-54770554 Msa0258430:three_prime_UTR 50.0%
GGCTTATGCTTGGCTTAGTG+TGG + chr2_2:54770579-54770598 None:intergenic 50.0%
AGGATCGTAGGGCTTATGCT+TGG + chr2_2:54770589-54770608 None:intergenic 50.0%
ATGGACAACCTATCGATCCG+AGG - chr2_2:54770662-54770681 Msa0258430:three_prime_UTR 50.0%
! GCACCGACACTTCTGATTGA+AGG - chr2_2:54770831-54770850 Msa0258430:three_prime_UTR 50.0%
AATTGGACGACCTGCAAGCA+TGG + chr2_2:54771966-54771985 None:intergenic 50.0%
!! TGTTGATTTCTCGCCGGTGA+CGG - chr2_2:54771988-54772007 Msa0258430:CDS 50.0%
ATTCTCCTCATACTGCCTGC+AGG + chr2_2:54772029-54772048 None:intergenic 50.0%
GAGGAGAATACTTGCAACCG+TGG - chr2_2:54772040-54772059 Msa0258430:CDS 50.0%
GAGAATACTTGCAACCGTGG+TGG - chr2_2:54772043-54772062 Msa0258430:CDS 50.0%
!! TGTTTGGAAAGCGCCACGAA+AGG - chr2_2:54772210-54772229 Msa0258430:intron 50.0%
GACATCGAAGCTATGAGGAG+AGG - chr2_2:54772264-54772283 Msa0258430:CDS 50.0%
TTACTGCTACGACTGCGATG+AGG + chr2_2:54772290-54772309 None:intergenic 50.0%
TTCAAGTCCTGGACGGAGAA+GGG - chr2_2:54772373-54772392 Msa0258430:intron 50.0%
CTACGATTCCTCCTTCCAAC+AGG + chr2_2:54772425-54772444 None:intergenic 50.0%
GAGGAATCGTAGTCCTGTCA+GGG - chr2_2:54772433-54772452 Msa0258430:intron 50.0%
AATCGTAGTCCTGTCAGGGA+TGG - chr2_2:54772437-54772456 Msa0258430:intron 50.0%
CGAGAATTGAGCAGTGGAAC+AGG - chr2_2:54772477-54772496 Msa0258430:intron 50.0%
TTGAGCAGTGGAACAGGGAA+AGG - chr2_2:54772483-54772502 Msa0258430:intron 50.0%
TGAGCAGTGGAACAGGGAAA+GGG - chr2_2:54772484-54772503 Msa0258430:intron 50.0%
GAACAGGGAAAGGGAAGAGA+AGG - chr2_2:54772493-54772512 Msa0258430:intron 50.0%
ACAGATCAATATCCCTCCCG+AGG + chr2_2:54772620-54772639 None:intergenic 50.0%
! AGGGGGCATATTCCACATCA+TGG + chr2_2:54772787-54772806 None:intergenic 50.0%
AAAAAATCCCAAGGGGGGAG+GGG + chr2_2:54772805-54772824 None:intergenic 50.0%
GAAAAAAATCCCAAGGGGGG+AGG + chr2_2:54772807-54772826 None:intergenic 50.0%
! CTTCACGTGTGATGGTGATC+AGG + chr2_2:54773381-54773400 None:intergenic 50.0%
GGTTAAGCATACGCTGTTGG+AGG - chr2_2:54773589-54773608 Msa0258430:CDS 50.0%
! ATTTTCCTCAGCCTGCAACC+AGG + chr2_2:54773732-54773751 None:intergenic 50.0%
AGGTGCGTCAGACATCTGTC+TGG - chr2_2:54770851-54770870 Msa0258430:three_prime_UTR 55.0%
CTGGTACGACATCACGACAC+CGG - chr2_2:54770870-54770889 Msa0258430:three_prime_UTR 55.0%
ACTTTCGTGAGGCTACCTGC+AGG - chr2_2:54772011-54772030 Msa0258430:CDS 55.0%
TGCTCCTACTGTGCCTTTCG+TGG + chr2_2:54772226-54772245 None:intergenic 55.0%
! ACGAAAGGCACAGTAGGAGC+AGG - chr2_2:54772225-54772244 Msa0258430:CDS 55.0%
ACAGTGATAGCAGGAGACGC+AGG - chr2_2:54772348-54772367 Msa0258430:intron 55.0%
AGACGCAGGACTTCAAGTCC+TGG - chr2_2:54772362-54772381 Msa0258430:intron 55.0%
GCAGGACTTCAAGTCCTGGA+CGG - chr2_2:54772366-54772385 Msa0258430:intron 55.0%
CTTCAAGTCCTGGACGGAGA+AGG - chr2_2:54772372-54772391 Msa0258430:intron 55.0%
TCAAGTCCTGGACGGAGAAG+GGG - chr2_2:54772374-54772393 Msa0258430:intron 55.0%
ACAGGACTTCGACTGCGACT+AGG + chr2_2:54772407-54772426 None:intergenic 55.0%
AGTCGCAGTCGAAGTCCTGT+TGG - chr2_2:54772407-54772426 Msa0258430:intron 55.0%
GCAGTCGAAGTCCTGTTGGA+AGG - chr2_2:54772411-54772430 Msa0258430:intron 55.0%
GTCGAAGTCCTGTTGGAAGG+AGG - chr2_2:54772414-54772433 Msa0258430:intron 55.0%
GGAGGAATCGTAGTCCTGTC+AGG - chr2_2:54772432-54772451 Msa0258430:intron 55.0%
GACGTGCGAGAATTGAGCAG+TGG - chr2_2:54772471-54772490 Msa0258430:intron 55.0%
GTGCCCGTTATGGCCATTAC+TGG + chr2_2:54772549-54772568 None:intergenic 55.0%
AGCAGCAACGGGAATCTCCT+CGG - chr2_2:54772600-54772619 Msa0258430:intron 55.0%
CCACCTGCACAGCGGAAAAT+GGG + chr2_2:54772749-54772768 None:intergenic 55.0%
ACCACCTGCACAGCGGAAAA+TGG + chr2_2:54772750-54772769 None:intergenic 55.0%
AAAAATCCCAAGGGGGGAGG+GGG + chr2_2:54772804-54772823 None:intergenic 55.0%
!! CGCGTGCTTGCTTGTTATCG+TGG - chr2_2:54773307-54773326 Msa0258430:intron 55.0%
TTTCTCCTGGTTGCAGGCTG+AGG - chr2_2:54773724-54773743 Msa0258430:CDS 55.0%
GCCTCACGAAAGTCCGTCAC+CGG + chr2_2:54772004-54772023 None:intergenic 60.0%
GGCTACCTGCAGGCAGTATG+AGG - chr2_2:54772021-54772040 Msa0258430:CDS 60.0%
! AGCGCCACGAAAGGCACAGT+AGG - chr2_2:54772219-54772238 Msa0258430:intron 60.0%
! TCCTGTCAGGGATGGTAGCG+AGG - chr2_2:54772445-54772464 Msa0258430:intron 60.0%
TCCTCGCTACCATCCCTGAC+AGG + chr2_2:54772449-54772468 None:intergenic 60.0%
GCAGCAACGGGAATCTCCTC+GGG - chr2_2:54772601-54772620 Msa0258430:intron 60.0%
CAACGGGAATCTCCTCGGGA+GGG - chr2_2:54772605-54772624 Msa0258430:intron 60.0%
CCTGCACAGCGGAAAATGGG+TGG + chr2_2:54772746-54772765 None:intergenic 60.0%
! CCACCCATTTTCCGCTGTGC+AGG - chr2_2:54772743-54772762 Msa0258430:intron 60.0%
! CCCATTTTCCGCTGTGCAGG+TGG - chr2_2:54772746-54772765 Msa0258430:intron 60.0%
TACCTGCACCACCTGCACAG+CGG + chr2_2:54772757-54772776 None:intergenic 60.0%
AATATGCCCCCTCCCCCCTT+GGG - chr2_2:54772795-54772814 Msa0258430:intron 60.0%
!! GCCGGTGACGGACTTTCGTG+AGG - chr2_2:54772000-54772019 Msa0258430:CDS 65.0%
GGCACAGTAGGAGCAGGAGC+AGG - chr2_2:54772231-54772250 Msa0258430:CDS 65.0%
GTCCTGGACGGAGAAGGGGA+AGG - chr2_2:54772378-54772397 Msa0258430:intron 65.0%
CTCCTTCCCCTTCTCCGTCC+AGG + chr2_2:54772383-54772402 None:intergenic 65.0%
GCAACGGGAATCTCCTCGGG+AGG - chr2_2:54772604-54772623 Msa0258430:intron 65.0%
TTCCGCTGTGCAGGTGGTGC+AGG - chr2_2:54772752-54772771 Msa0258430:intron 65.0%
GAATATGCCCCCTCCCCCCT+TGG - chr2_2:54772794-54772813 Msa0258430:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 54770338 54773987 54770338 ID=Msa0258430;Name=Msa0258430
chr2_2 mRNA 54770338 54773987 54770338 ID=Msa0258430-mRNA-1;Parent=Msa0258430;Name=Msa0258430-mRNA-1;_AED=0.07;_eAED=0.07;_QI=131|1|1|1|0.6|0.5|6|1124|324
chr2_2 exon 54770338 54771101 54770338 ID=Msa0258430-mRNA-1:exon:16507;Parent=Msa0258430-mRNA-1
chr2_2 exon 54771217 54771560 54771217 ID=Msa0258430-mRNA-1:exon:16506;Parent=Msa0258430-mRNA-1
chr2_2 exon 54771675 54772132 54771675 ID=Msa0258430-mRNA-1:exon:16505;Parent=Msa0258430-mRNA-1
chr2_2 exon 54772224 54772350 54772224 ID=Msa0258430-mRNA-1:exon:16504;Parent=Msa0258430-mRNA-1
chr2_2 exon 54773190 54773271 54773190 ID=Msa0258430-mRNA-1:exon:16503;Parent=Msa0258430-mRNA-1
chr2_2 exon 54773533 54773987 54773533 ID=Msa0258430-mRNA-1:exon:16502;Parent=Msa0258430-mRNA-1
chr2_2 five_prime_UTR 54773857 54773987 54773857 ID=Msa0258430-mRNA-1:five_prime_utr;Parent=Msa0258430-mRNA-1
chr2_2 CDS 54773533 54773856 54773533 ID=Msa0258430-mRNA-1:cds;Parent=Msa0258430-mRNA-1
chr2_2 CDS 54773190 54773271 54773190 ID=Msa0258430-mRNA-1:cds;Parent=Msa0258430-mRNA-1
chr2_2 CDS 54772224 54772350 54772224 ID=Msa0258430-mRNA-1:cds;Parent=Msa0258430-mRNA-1
chr2_2 CDS 54771691 54772132 54771691 ID=Msa0258430-mRNA-1:cds;Parent=Msa0258430-mRNA-1
chr2_2 three_prime_UTR 54771675 54771690 54771675 ID=Msa0258430-mRNA-1:three_prime_utr;Parent=Msa0258430-mRNA-1
chr2_2 three_prime_UTR 54771217 54771560 54771217 ID=Msa0258430-mRNA-1:three_prime_utr;Parent=Msa0258430-mRNA-1
chr2_2 three_prime_UTR 54770338 54771101 54770338 ID=Msa0258430-mRNA-1:three_prime_utr;Parent=Msa0258430-mRNA-1
Gene Sequence

>Msa0258430

ATGGCGGAACATTTAGCTTCAATTTTCGGCACAGAGAAAGACCGCGTTAACTGTCCATTCTACTTCAAGATCGGAGCATGTCGACACGGCGATCGATGCTCTCGTCTCCACACTAAGCCAAGCATAAGCCCTACGATCCTCCTCTCTAATATGTATCAGCGTCCTGATATGATTACTCCTGGTGTTGATGTTCATGGACAACCTATCGATCCGAGGAAGATTCAGGATCATTTTGAAGAGTTTTATGAGGATTTGTTTGATGAATTGTCTAAGTATGGTGATATTGAAAGTCTTAATGTTTGTGATAATCTCGCTGATCACATGGTTGGTAATGTGTATGTTCAGTTTAGAGAGGAAGAGCATGCTGCAAATGCTGTTAAGAATCTCACTGGAAGATTTTATGCTGGTCGTCCAATTATTGTTGATTTCTCGCCGGTGACGGACTTTCGTGAGGCTACCTGCAGGCAGTATGAGGAGAATACTTGCAACCGTGGTGGTTATTGCAACTTCATGCACTTGAAAAGAATTAGCAGGGAATTGAGGCGTCAATTGTTTGGAAAGCGCCACGAAAGGCACAGTAGGAGCAGGAGCAGGAGTCCTTACAGACATCGAAGCTATGAGGAGAGGCCTCATCGCAGTCGTAGCAGTAAGTATGATGACAGAGACAGAGACAGGGACTATCATCACGACAGTGATAGCAGGAGACGCAGGACTTCAAGTCCTGGACGGAGAAGGGGAAGGAGTCCTAGTCGCAGTCGAAGTCCTGTTGGAAGGAGGAATCGTAGTCCTGTCAGGGATGGTAGCGAGGAGAGACGTGCGAGAATTGAGCAGTGGAACAGGGAAAGGGAAGAGAAGGAACCCACAAGTAAGGTTAATACAGAGGAAACCAGTAATGGCCATAACGGGCACTCACAAAATGCTAGCGCATATCATGAGAATCAGCAGCAACGGGAATCTCCTCGGGAGGGATATTGA
Protein sequence

>Msa0258430

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITPGVDVHGQPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEEHAANAVKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRELRRQLFGKRHERHSRSRSRSPYRHRSYEERPHRSRSSKYDDRDRDRDYHHDSDSRRRRTSSPGRRRGRSPSRSRSPVGRRNRSPVRDGSEERRARIEQWNREREEKEPTSKVNTEETSNGHNGHSQNASAYHENQQQRESPREGY*