Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264510 | XP_013465417.1 | 97.283 | 368 | 10 | 0 | 1 | 368 | 289 | 656 | 0.0 | 750 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264510 | sp|Q9LTI5|SCL11_ARATH | 55.882 | 374 | 159 | 3 | 1 | 368 | 227 | 600 | 1.29e-154 | 451 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264510 | A0A072VCF8 | 97.283 | 368 | 10 | 0 | 1 | 368 | 289 | 656 | 0.0 | 750 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0264510 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0223140 | Msa0264510 | 0.802735 | 4.872652e-49 | -8.615850e-47 |
| Msa0264500 | Msa0264510 | 0.838708 | 2.449340e-57 | -8.615850e-47 |
| Msa0264510 | Msa0302510 | 0.811766 | 5.940989e-51 | -8.615850e-47 |
| Msa0264510 | Msa0339720 | 0.804925 | 1.709546e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264510 | MtrunA17_Chr2g0328411 | 96.995 | 366 | 11 | 0 | 1 | 366 | 289 | 654 | 0.0 | 743 |
| Msa0264510 | MtrunA17_Chr2g0328431 | 93.750 | 368 | 23 | 0 | 1 | 368 | 289 | 656 | 0.0 | 726 |
| Msa0264510 | MtrunA17_Chr2g0328401 | 88.184 | 347 | 41 | 0 | 1 | 347 | 290 | 636 | 0.0 | 656 |
| Msa0264510 | MtrunA17_Chr4g0031741 | 73.171 | 369 | 98 | 1 | 1 | 368 | 284 | 652 | 0.0 | 592 |
| Msa0264510 | MtrunA17_Chr7g0238891 | 58.602 | 372 | 149 | 2 | 1 | 368 | 372 | 742 | 8.71e-163 | 473 |
| Msa0264510 | MtrunA17_Chr4g0031721 | 58.221 | 371 | 152 | 2 | 1 | 368 | 316 | 686 | 1.31e-161 | 469 |
| Msa0264510 | MtrunA17_Chr4g0031701 | 56.800 | 375 | 155 | 2 | 1 | 368 | 254 | 628 | 8.01e-159 | 459 |
| Msa0264510 | MtrunA17_Chr4g0031711 | 56.533 | 375 | 156 | 2 | 1 | 368 | 361 | 735 | 1.58e-158 | 462 |
| Msa0264510 | MtrunA17_Chr2g0328391 | 56.300 | 373 | 158 | 2 | 1 | 368 | 299 | 671 | 3.43e-158 | 459 |
| Msa0264510 | MtrunA17_Chr4g0031731 | 56.533 | 375 | 156 | 2 | 1 | 368 | 254 | 628 | 5.32e-156 | 452 |
| Msa0264510 | MtrunA17_Chr2g0328381 | 49.465 | 374 | 178 | 5 | 1 | 368 | 275 | 643 | 1.64e-134 | 398 |
| Msa0264510 | MtrunA17_Chr2g0328341 | 48.794 | 373 | 182 | 5 | 1 | 368 | 272 | 640 | 1.80e-132 | 392 |
| Msa0264510 | MtrunA17_Chr2g0328361 | 45.699 | 372 | 170 | 6 | 1 | 368 | 274 | 617 | 2.94e-116 | 350 |
| Msa0264510 | MtrunA17_Chr2g0328371 | 50.391 | 256 | 122 | 2 | 68 | 322 | 1 | 252 | 1.21e-95 | 285 |
| Msa0264510 | MtrunA17_Chr5g0447691 | 31.978 | 369 | 245 | 5 | 1 | 365 | 177 | 543 | 1.02e-57 | 196 |
| Msa0264510 | MtrunA17_Chr2g0290241 | 28.804 | 368 | 257 | 4 | 2 | 365 | 58 | 424 | 1.25e-57 | 193 |
| Msa0264510 | MtrunA17_Chr2g0319091 | 32.520 | 369 | 243 | 6 | 1 | 365 | 212 | 578 | 1.65e-54 | 188 |
| Msa0264510 | MtrunA17_Chr8g0376381 | 32.609 | 368 | 228 | 9 | 2 | 365 | 170 | 521 | 6.06e-53 | 183 |
| Msa0264510 | MtrunA17_Chr4g0057891 | 29.534 | 386 | 236 | 8 | 1 | 365 | 149 | 519 | 6.07e-53 | 183 |
| Msa0264510 | MtrunA17_Chr1g0159461 | 28.804 | 368 | 258 | 3 | 1 | 365 | 225 | 591 | 1.69e-52 | 183 |
| Msa0264510 | MtrunA17_Chr4g0076091 | 28.610 | 367 | 255 | 6 | 5 | 366 | 179 | 543 | 2.30e-52 | 182 |
| Msa0264510 | MtrunA17_Chr7g0224271 | 29.351 | 385 | 240 | 5 | 1 | 365 | 300 | 672 | 1.88e-51 | 181 |
| Msa0264510 | MtrunA17_Chr3g0101141 | 28.804 | 368 | 258 | 3 | 1 | 365 | 175 | 541 | 1.25e-50 | 177 |
| Msa0264510 | MtrunA17_Chr5g0445331 | 29.679 | 374 | 251 | 8 | 1 | 365 | 161 | 531 | 1.49e-49 | 174 |
| Msa0264510 | MtrunA17_Chr3g0125811 | 27.717 | 368 | 262 | 3 | 1 | 365 | 203 | 569 | 2.42e-49 | 174 |
| Msa0264510 | MtrunA17_Chr8g0357601 | 29.144 | 374 | 244 | 5 | 5 | 365 | 186 | 551 | 5.37e-49 | 173 |
| Msa0264510 | MtrunA17_Chr2g0306641 | 31.548 | 336 | 219 | 8 | 33 | 365 | 159 | 486 | 1.61e-46 | 165 |
| Msa0264510 | MtrunA17_Chr3g0110971 | 29.630 | 378 | 241 | 7 | 2 | 365 | 220 | 586 | 1.67e-46 | 167 |
| Msa0264510 | MtrunA17_Chr7g0245601 | 29.428 | 367 | 242 | 7 | 4 | 367 | 441 | 793 | 7.34e-45 | 164 |
| Msa0264510 | MtrunA17_Chr3g0085681 | 27.578 | 417 | 242 | 7 | 2 | 365 | 26 | 435 | 2.23e-43 | 155 |
| Msa0264510 | MtrunA17_Chr4g0038761 | 28.457 | 376 | 240 | 8 | 4 | 368 | 87 | 444 | 1.16e-42 | 154 |
| Msa0264510 | MtrunA17_Chr4g0038851 | 25.293 | 427 | 251 | 5 | 1 | 365 | 48 | 468 | 2.91e-40 | 148 |
| Msa0264510 | MtrunA17_Chr4g0057291 | 24.869 | 382 | 262 | 9 | 1 | 367 | 292 | 663 | 5.44e-38 | 144 |
| Msa0264510 | MtrunA17_Chr2g0294461 | 27.822 | 381 | 245 | 8 | 5 | 365 | 214 | 584 | 8.58e-38 | 143 |
| Msa0264510 | MtrunA17_Chr4g0039661 | 26.005 | 373 | 255 | 7 | 2 | 365 | 194 | 554 | 6.32e-35 | 134 |
| Msa0264510 | MtrunA17_Chr1g0200401 | 26.735 | 389 | 240 | 12 | 8 | 365 | 84 | 458 | 1.57e-32 | 126 |
| Msa0264510 | MtrunA17_Chr1g0183641 | 26.596 | 376 | 245 | 12 | 1 | 366 | 123 | 477 | 1.74e-32 | 127 |
| Msa0264510 | MtrunA17_Chr2g0294471 | 25.936 | 374 | 258 | 8 | 5 | 365 | 208 | 575 | 2.25e-31 | 124 |
| Msa0264510 | MtrunA17_Chr5g0401131 | 25.258 | 388 | 259 | 9 | 1 | 367 | 114 | 491 | 2.92e-31 | 123 |
| Msa0264510 | MtrunA17_Chr7g0270031 | 26.667 | 375 | 245 | 9 | 6 | 365 | 194 | 553 | 4.78e-31 | 123 |
| Msa0264510 | MtrunA17_Chr5g0424131 | 26.124 | 356 | 239 | 8 | 28 | 366 | 151 | 499 | 3.64e-28 | 115 |
| Msa0264510 | MtrunA17_Chr3g0114841 | 27.717 | 368 | 225 | 13 | 24 | 366 | 149 | 500 | 8.96e-28 | 114 |
| Msa0264510 | MtrunA17_Chr3g0085361 | 25.779 | 353 | 204 | 6 | 62 | 365 | 6 | 349 | 3.94e-27 | 110 |
| Msa0264510 | MtrunA17_Chr7g0236851 | 27.402 | 281 | 194 | 5 | 87 | 365 | 384 | 656 | 2.11e-26 | 110 |
| Msa0264510 | MtrunA17_Chr6g0468561 | 27.798 | 277 | 182 | 6 | 98 | 365 | 394 | 661 | 2.95e-25 | 107 |
| Msa0264510 | MtrunA17_Chr5g0396491 | 31.100 | 209 | 134 | 2 | 1 | 205 | 56 | 258 | 6.20e-25 | 105 |
| Msa0264510 | MtrunA17_Chr5g0396491 | 28.859 | 149 | 106 | 0 | 217 | 365 | 329 | 477 | 1.77e-17 | 83.6 |
| Msa0264510 | MtrunA17_Chr5g0401421 | 21.583 | 417 | 275 | 9 | 1 | 368 | 35 | 448 | 1.42e-24 | 104 |
| Msa0264510 | MtrunA17_Chr1g0194621 | 23.120 | 359 | 249 | 8 | 23 | 365 | 170 | 517 | 1.61e-24 | 104 |
| Msa0264510 | MtrunA17_Chr8g0383981 | 23.747 | 379 | 249 | 16 | 6 | 368 | 144 | 498 | 1.20e-23 | 102 |
| Msa0264510 | MtrunA17_Chr4g0053901 | 22.782 | 417 | 268 | 9 | 1 | 368 | 59 | 470 | 7.62e-23 | 99.4 |
| Msa0264510 | MtrunA17_Chr2g0329591 | 25.500 | 400 | 244 | 11 | 1 | 367 | 74 | 452 | 1.03e-21 | 95.9 |
| Msa0264510 | MtrunA17_Chr7g0230731 | 23.861 | 373 | 257 | 10 | 2 | 365 | 373 | 727 | 2.27e-17 | 84.0 |
| Msa0264510 | MtrunA17_Chr7g0230771 | 23.181 | 371 | 262 | 9 | 2 | 365 | 376 | 730 | 9.27e-17 | 82.0 |
| Msa0264510 | MtrunA17_Chr4g0012071 | 22.254 | 355 | 248 | 9 | 20 | 365 | 215 | 550 | 1.84e-16 | 80.9 |
| Msa0264510 | MtrunA17_Chr8g0344101 | 24.561 | 399 | 245 | 14 | 1 | 365 | 223 | 599 | 4.49e-16 | 79.7 |
| Msa0264510 | MtrunA17_Chr2g0323111 | 25.556 | 180 | 131 | 3 | 190 | 368 | 131 | 308 | 4.19e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264510 | AT5G59450.1 | 55.882 | 374 | 159 | 3 | 1 | 368 | 227 | 600 | 1.31e-155 | 451 |
| Msa0264510 | AT3G46600.2 | 55.676 | 370 | 162 | 1 | 1 | 368 | 4 | 373 | 2.99e-154 | 439 |
| Msa0264510 | AT1G07530.1 | 55.914 | 372 | 160 | 3 | 1 | 368 | 396 | 767 | 1.74e-152 | 448 |
| Msa0264510 | AT3G46600.3 | 55.676 | 370 | 162 | 1 | 1 | 368 | 180 | 549 | 3.24e-152 | 440 |
| Msa0264510 | AT3G46600.1 | 55.676 | 370 | 162 | 1 | 1 | 368 | 212 | 581 | 6.97e-152 | 441 |
| Msa0264510 | AT2G37650.2 | 57.412 | 371 | 151 | 3 | 1 | 367 | 335 | 702 | 8.74e-150 | 439 |
| Msa0264510 | AT2G37650.1 | 57.412 | 371 | 151 | 3 | 1 | 367 | 347 | 714 | 1.56e-149 | 439 |
| Msa0264510 | AT2G29060.2 | 56.032 | 373 | 158 | 4 | 1 | 367 | 284 | 656 | 4.85e-149 | 436 |
| Msa0264510 | AT2G29060.1 | 56.032 | 373 | 158 | 4 | 1 | 367 | 321 | 693 | 1.84e-148 | 436 |
| Msa0264510 | AT2G29065.1 | 55.673 | 379 | 157 | 5 | 1 | 368 | 252 | 630 | 4.61e-147 | 430 |
| Msa0264510 | AT1G07520.2 | 51.058 | 378 | 175 | 5 | 1 | 368 | 154 | 531 | 1.78e-134 | 394 |
| Msa0264510 | AT1G07520.4 | 51.058 | 378 | 175 | 5 | 1 | 368 | 154 | 531 | 1.78e-134 | 394 |
| Msa0264510 | AT1G07520.1 | 51.058 | 378 | 175 | 5 | 1 | 368 | 318 | 695 | 1.07e-132 | 395 |
| Msa0264510 | AT1G07520.3 | 51.058 | 378 | 175 | 5 | 1 | 368 | 319 | 696 | 1.14e-132 | 395 |
| Msa0264510 | AT1G50600.3 | 33.152 | 368 | 242 | 3 | 1 | 365 | 159 | 525 | 3.63e-59 | 200 |
| Msa0264510 | AT1G50600.1 | 33.152 | 368 | 242 | 3 | 1 | 365 | 230 | 596 | 1.55e-58 | 200 |
| Msa0264510 | AT1G50600.2 | 33.152 | 368 | 242 | 3 | 1 | 365 | 234 | 600 | 1.61e-58 | 200 |
| Msa0264510 | AT5G48150.1 | 30.978 | 368 | 249 | 3 | 2 | 365 | 123 | 489 | 1.44e-57 | 195 |
| Msa0264510 | AT5G48150.4 | 30.978 | 368 | 249 | 3 | 2 | 365 | 123 | 489 | 1.44e-57 | 195 |
| Msa0264510 | AT5G48150.2 | 30.978 | 368 | 249 | 3 | 2 | 365 | 123 | 489 | 1.44e-57 | 195 |
| Msa0264510 | AT5G48150.3 | 30.978 | 368 | 249 | 3 | 2 | 365 | 123 | 489 | 1.44e-57 | 195 |
| Msa0264510 | AT2G04890.1 | 29.076 | 368 | 250 | 4 | 1 | 365 | 53 | 412 | 2.18e-51 | 177 |
| Msa0264510 | AT4G17230.1 | 29.459 | 370 | 257 | 3 | 1 | 367 | 158 | 526 | 6.53e-49 | 172 |
| Msa0264510 | AT4G17230.2 | 29.459 | 370 | 257 | 3 | 1 | 367 | 158 | 526 | 6.53e-49 | 172 |
| Msa0264510 | AT1G14920.1 | 31.233 | 365 | 235 | 9 | 5 | 365 | 176 | 528 | 7.66e-49 | 172 |
| Msa0264510 | AT3G03450.1 | 30.105 | 382 | 228 | 9 | 2 | 365 | 184 | 544 | 9.99e-48 | 170 |
| Msa0264510 | AT1G66350.1 | 30.978 | 368 | 226 | 10 | 5 | 365 | 159 | 505 | 7.22e-47 | 167 |
| Msa0264510 | AT3G54220.1 | 30.563 | 373 | 233 | 9 | 4 | 367 | 296 | 651 | 1.01e-46 | 169 |
| Msa0264510 | AT1G21450.1 | 27.174 | 368 | 265 | 2 | 1 | 365 | 225 | 592 | 2.50e-46 | 167 |
| Msa0264510 | AT2G01570.1 | 29.076 | 368 | 245 | 9 | 2 | 365 | 225 | 580 | 4.92e-45 | 163 |
| Msa0264510 | AT5G17490.1 | 30.894 | 369 | 230 | 10 | 5 | 365 | 164 | 515 | 2.78e-44 | 160 |
| Msa0264510 | AT5G66770.1 | 28.883 | 367 | 250 | 7 | 4 | 365 | 223 | 583 | 1.21e-43 | 159 |
| Msa0264510 | AT3G50650.1 | 26.197 | 355 | 248 | 5 | 19 | 365 | 193 | 541 | 3.72e-38 | 144 |
| Msa0264510 | AT5G41920.1 | 26.667 | 375 | 247 | 7 | 1 | 365 | 43 | 399 | 7.32e-38 | 140 |
| Msa0264510 | AT4G37650.1 | 23.785 | 391 | 268 | 9 | 1 | 367 | 146 | 530 | 7.32e-35 | 134 |
| Msa0264510 | AT1G63100.1 | 26.031 | 388 | 255 | 9 | 1 | 366 | 252 | 629 | 1.07e-33 | 132 |
| Msa0264510 | AT5G52510.1 | 27.344 | 384 | 242 | 11 | 4 | 365 | 271 | 639 | 1.28e-33 | 132 |
| Msa0264510 | AT1G63100.2 | 26.031 | 388 | 255 | 9 | 1 | 366 | 277 | 654 | 1.45e-33 | 132 |
| Msa0264510 | AT3G49950.1 | 27.062 | 388 | 254 | 11 | 1 | 367 | 30 | 409 | 4.06e-32 | 125 |
| Msa0264510 | AT4G08250.1 | 27.405 | 343 | 229 | 10 | 35 | 366 | 144 | 477 | 1.06e-28 | 116 |
| Msa0264510 | AT1G55580.1 | 22.739 | 387 | 233 | 9 | 30 | 365 | 73 | 444 | 3.24e-23 | 100 |
| Msa0264510 | AT1G50420.1 | 27.354 | 223 | 147 | 4 | 1 | 214 | 57 | 273 | 5.31e-23 | 100 |
| Msa0264510 | AT1G50420.1 | 28.859 | 149 | 106 | 0 | 217 | 365 | 330 | 478 | 2.60e-17 | 83.6 |
| Msa0264510 | AT3G13840.1 | 23.773 | 387 | 248 | 14 | 1 | 365 | 148 | 509 | 2.86e-19 | 89.7 |
| Msa0264510 | AT4G00150.1 | 22.414 | 348 | 237 | 9 | 25 | 365 | 232 | 553 | 3.45e-14 | 74.3 |
| Msa0264510 | AT5G67411.1 | 29.208 | 202 | 126 | 9 | 114 | 302 | 1 | 198 | 5.24e-12 | 65.1 |
Find 77 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCGACTACAAAATCTTTA+TGG | 0.219672 | 2_2:-64445287 | None:intergenic |
| AGCGTTCATGTTATTGATTT+TGG | 0.271020 | 2_2:+64444580 | Msa0264510:CDS |
| CCTCCAAAGCTTCGAATTAC+AGG | 0.281535 | 2_2:+64444664 | Msa0264510:CDS |
| AGGCAACACTCTTCGCCTTT+TGG | 0.305061 | 2_2:+64444349 | Msa0264510:CDS |
| ACTCCATGGAAGAAGACTTT+TGG | 0.314241 | 2_2:-64444958 | None:intergenic |
| TTCCTTCTTCACCATTGCTT+TGG | 0.317965 | 2_2:-64445262 | None:intergenic |
| TTTGTATGCTTTATCTGCTT+GGG | 0.337273 | 2_2:+64445350 | Msa0264510:CDS |
| ACAACTTCATTGCACAGAAA+TGG | 0.347339 | 2_2:+64444788 | Msa0264510:CDS |
| TTAGCTCATTACTTTGCTAA+TGG | 0.355828 | 2_2:+64444388 | Msa0264510:CDS |
| ATTCCTGTAATTCGAAGCTT+TGG | 0.359837 | 2_2:-64444667 | None:intergenic |
| AATCAGGTTGGATTCTGATT+TGG | 0.361148 | 2_2:+64445230 | Msa0264510:CDS |
| GCAGAAAGGGTGGAGGAAAC+TGG | 0.374425 | 2_2:+64444718 | Msa0264510:CDS |
| ATCGCTGTTTGATATGTTTG+AGG | 0.388834 | 2_2:+64445047 | Msa0264510:CDS |
| AGCTTCAACACAGCTTCTCT+TGG | 0.390505 | 2_2:-64444919 | None:intergenic |
| GTTTCCTCCACCCTTTCTGC+AGG | 0.394328 | 2_2:-64444715 | None:intergenic |
| AAGCTGTGTTGAAGCTGATC+AGG | 0.396558 | 2_2:+64444926 | Msa0264510:CDS |
| GAGCTGGGTTCAAGCAAATC+AGG | 0.413441 | 2_2:+64445214 | Msa0264510:CDS |
| CCTCTTGGTTTGTCAACTGC+TGG | 0.416434 | 2_2:+64444451 | Msa0264510:CDS |
| TTCTGACGAGGCACGGCCAC+TGG | 0.426845 | 2_2:-64444618 | None:intergenic |
| CAACTTCATTGCACAGAAAT+GGG | 0.427023 | 2_2:+64444789 | Msa0264510:CDS |
| CTTACAAGCAGTGGCAGGTC+AGG | 0.430666 | 2_2:+64445184 | Msa0264510:CDS |
| ATGCTTGAGAGAGGGTTGTT+TGG | 0.436357 | 2_2:+64445102 | Msa0264510:CDS |
| TAGCTTGTGAGGGAGCAAAA+AGG | 0.438175 | 2_2:+64445145 | Msa0264510:CDS |
| TTCAATGCCACAGTTTCATC+AGG | 0.440053 | 2_2:-64444892 | None:intergenic |
| TGCCACTGCTTGTAAGTCTC+AGG | 0.440407 | 2_2:-64445177 | None:intergenic |
| TTGAGAGAGGGTTGTTTGGA+AGG | 0.472118 | 2_2:+64445106 | Msa0264510:CDS |
| GTGCTTCCTTAAACCGAGTC+AGG | 0.477530 | 2_2:-64445011 | None:intergenic |
| CTTGAGATCCTTTAGACGGA+TGG | 0.484669 | 2_2:-64444815 | None:intergenic |
| CTTTCTGCAGGTCTAAATCC+TGG | 0.490039 | 2_2:-64444703 | None:intergenic |
| TAGTCGATGTGGATGGTAAG+TGG | 0.492425 | 2_2:+64445301 | Msa0264510:CDS |
| CGAAGCTTTGGAGGACCACC+AGG | 0.497005 | 2_2:-64444655 | None:intergenic |
| CCTGTAATTCGAAGCTTTGG+AGG | 0.497546 | 2_2:-64444664 | None:intergenic |
| ATGGGAAACCATCCGTCTAA+AGG | 0.498098 | 2_2:+64444807 | Msa0264510:CDS |
| AACCAAAGCAATGGTGAAGA+AGG | 0.500696 | 2_2:+64445260 | Msa0264510:CDS |
| AATCCAAAAGTCTTCTTCCA+TGG | 0.502095 | 2_2:+64444955 | Msa0264510:CDS |
| TAATGGTCTTGAGATAAGAT+TGG | 0.503318 | 2_2:+64444405 | Msa0264510:CDS |
| GGAATTGAGCTTCCTCAGCC+AGG | 0.503697 | 2_2:+64444685 | Msa0264510:CDS |
| TAAAGGATCTCAAGATAGAC+AGG | 0.503799 | 2_2:+64444824 | Msa0264510:CDS |
| CAGGTCAGGAACAAGAGAGC+TGG | 0.506156 | 2_2:+64445198 | Msa0264510:CDS |
| ACGCCATCATATCAGCCTCT+TGG | 0.510174 | 2_2:+64444436 | Msa0264510:CDS |
| TTCTTCCATGGAGTTGCCAA+TGG | 0.510258 | 2_2:+64444967 | Msa0264510:CDS |
| ATGAGCTACTCAAACAGATT+AGG | 0.511922 | 2_2:+64444329 | Msa0264510:CDS |
| AGGATTTAGACCTGCAGAAA+GGG | 0.512549 | 2_2:+64444705 | Msa0264510:CDS |
| AAACCAAGAGGCTGATATGA+TGG | 0.522698 | 2_2:-64444439 | None:intergenic |
| CGTTGGAGTCCATTGCCAAA+AGG | 0.523700 | 2_2:-64444364 | None:intergenic |
| CTGTAGCGAGCTACGATCAA+AGG | 0.536487 | 2_2:+64444299 | Msa0264510:CDS |
| TGAGAGAGGGTTGTTTGGAA+GGG | 0.539295 | 2_2:+64445107 | Msa0264510:CDS |
| AACTTCCATTGGCAACTCCA+TGG | 0.540581 | 2_2:-64444972 | None:intergenic |
| TATAAATGTTATAGCTTGTG+AGG | 0.544729 | 2_2:+64445134 | Msa0264510:CDS |
| CAGGATTTAGACCTGCAGAA+AGG | 0.549603 | 2_2:+64444704 | Msa0264510:CDS |
| GCAATGAAGTTGTATTCAAA+TGG | 0.550757 | 2_2:-64444778 | None:intergenic |
| AGTCGATGTGGATGGTAAGT+GGG | 0.556259 | 2_2:+64445302 | Msa0264510:CDS |
| CGGTGCGCTATAACTTCCAT+TGG | 0.556645 | 2_2:-64444983 | None:intergenic |
| TTGTGCACATTGATTTAGCA+TGG | 0.558170 | 2_2:-64444275 | None:intergenic |
| GCATTTGTCATTCTCTGCAA+AGG | 0.559014 | 2_2:-64444514 | None:intergenic |
| ATGCCACAGTTTCATCAGGA+AGG | 0.560068 | 2_2:-64444888 | None:intergenic |
| CTATCTTGAGATCCTTTAGA+CGG | 0.567333 | 2_2:-64444819 | None:intergenic |
| TGAGACTTACAAGCAGTGGC+AGG | 0.569446 | 2_2:+64445179 | Msa0264510:CDS |
| CAAAGTAATGAGCTAAACGT+TGG | 0.573182 | 2_2:-64444381 | None:intergenic |
| AGGTCAGGAACAAGAGAGCT+GGG | 0.576170 | 2_2:+64445199 | Msa0264510:CDS |
| TATCAAACAGCGATGAGAAG+TGG | 0.592685 | 2_2:-64445038 | None:intergenic |
| CAGAGGTCGATGCTTGAGAG+AGG | 0.600053 | 2_2:+64445093 | Msa0264510:CDS |
| GGCCTGAGACTTACAAGCAG+TGG | 0.600499 | 2_2:+64445175 | Msa0264510:CDS |
| ATTTAGACCTGCAGAAAGGG+TGG | 0.601556 | 2_2:+64444708 | Msa0264510:CDS |
| ATAAATGTTATAGCTTGTGA+GGG | 0.613447 | 2_2:+64445135 | Msa0264510:CDS |
| TGGGTTCAAGCAAATCAGGT+TGG | 0.613823 | 2_2:+64445218 | Msa0264510:CDS |
| GCAGGTCTAAATCCTGGCTG+AGG | 0.615245 | 2_2:-64444697 | None:intergenic |
| TAGACCTGCAGAAAGGGTGG+AGG | 0.621359 | 2_2:+64444711 | Msa0264510:CDS |
| GACCTCTGCGTGTCTTCACG+AGG | 0.643181 | 2_2:-64445078 | None:intergenic |
| AGAAAACTTTCATTAAGACC+TGG | 0.645902 | 2_2:+64444637 | Msa0264510:CDS |
| AGAGGTCGATGCTTGAGAGA+GGG | 0.653291 | 2_2:+64445094 | Msa0264510:CDS |
| GGTGAATGAAACCAAAGCAA+TGG | 0.658724 | 2_2:+64445251 | Msa0264510:CDS |
| GAACCTTCCTGATGAAACTG+TGG | 0.660816 | 2_2:+64444885 | Msa0264510:CDS |
| AAAGGGTGGAGGAAACTGGA+CGG | 0.662270 | 2_2:+64444722 | Msa0264510:CDS |
| AAACTTTCATTAAGACCTGG+TGG | 0.664266 | 2_2:+64444640 | Msa0264510:CDS |
| CCAGCAGTTGACAAACCAAG+AGG | 0.683575 | 2_2:-64444451 | None:intergenic |
| TGCCTCGTGAAGACACGCAG+AGG | 0.691967 | 2_2:+64445076 | Msa0264510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATTTTGGAATTTTCTA+TGG | + | chr2_2:64444592-64444611 | Msa0264510:CDS | 20.0% |
| !!! | ATTGATTTTGGAATTTTCTA+TGG | + | chr2_2:64444592-64444611 | Msa0264510:CDS | 20.0% |
| !!! | CACTATTTTGAAAATCGTTT+TGG | - | chr2_2:64444548-64444567 | None:intergenic | 25.0% |
| !! | TATAAATGTTATAGCTTGTG+AGG | + | chr2_2:64445134-64445153 | Msa0264510:CDS | 25.0% |
| !! | ATAAATGTTATAGCTTGTGA+GGG | + | chr2_2:64445135-64445154 | Msa0264510:CDS | 25.0% |
| !!! | CACTATTTTGAAAATCGTTT+TGG | - | chr2_2:64444548-64444567 | None:intergenic | 25.0% |
| !! | TATAAATGTTATAGCTTGTG+AGG | + | chr2_2:64445134-64445153 | Msa0264510:CDS | 25.0% |
| !! | ATAAATGTTATAGCTTGTGA+GGG | + | chr2_2:64445135-64445154 | Msa0264510:CDS | 25.0% |
| TTAGCTCATTACTTTGCTAA+TGG | + | chr2_2:64444388-64444407 | Msa0264510:CDS | 30.0% | |
| ! | TAATGGTCTTGAGATAAGAT+TGG | + | chr2_2:64444405-64444424 | Msa0264510:CDS | 30.0% |
| !!! | AGCGTTCATGTTATTGATTT+TGG | + | chr2_2:64444580-64444599 | Msa0264510:CDS | 30.0% |
| ! | TTAATGAAAGTTTTCTGACG+AGG | - | chr2_2:64444633-64444652 | None:intergenic | 30.0% |
| AGAAAACTTTCATTAAGACC+TGG | + | chr2_2:64444637-64444656 | Msa0264510:CDS | 30.0% | |
| GCAATGAAGTTGTATTCAAA+TGG | - | chr2_2:64444781-64444800 | None:intergenic | 30.0% | |
| ! | CATCGACTACAAAATCTTTA+TGG | - | chr2_2:64445290-64445309 | None:intergenic | 30.0% |
| ! | TAAAGATTTTGTAGTCGATG+TGG | + | chr2_2:64445290-64445309 | Msa0264510:CDS | 30.0% |
| ! | TTTTGTATGCTTTATCTGCT+TGG | + | chr2_2:64445349-64445368 | Msa0264510:CDS | 30.0% |
| TTTGTATGCTTTATCTGCTT+GGG | + | chr2_2:64445350-64445369 | Msa0264510:CDS | 30.0% | |
| TTAGCTCATTACTTTGCTAA+TGG | + | chr2_2:64444388-64444407 | Msa0264510:CDS | 30.0% | |
| ! | TAATGGTCTTGAGATAAGAT+TGG | + | chr2_2:64444405-64444424 | Msa0264510:CDS | 30.0% |
| !!! | AGCGTTCATGTTATTGATTT+TGG | + | chr2_2:64444580-64444599 | Msa0264510:CDS | 30.0% |
| ! | TTAATGAAAGTTTTCTGACG+AGG | - | chr2_2:64444633-64444652 | None:intergenic | 30.0% |
| AGAAAACTTTCATTAAGACC+TGG | + | chr2_2:64444637-64444656 | Msa0264510:CDS | 30.0% | |
| GCAATGAAGTTGTATTCAAA+TGG | - | chr2_2:64444781-64444800 | None:intergenic | 30.0% | |
| ! | CATCGACTACAAAATCTTTA+TGG | - | chr2_2:64445290-64445309 | None:intergenic | 30.0% |
| ! | TAAAGATTTTGTAGTCGATG+TGG | + | chr2_2:64445290-64445309 | Msa0264510:CDS | 30.0% |
| ! | TTTTGTATGCTTTATCTGCT+TGG | + | chr2_2:64445349-64445368 | Msa0264510:CDS | 30.0% |
| TTTGTATGCTTTATCTGCTT+GGG | + | chr2_2:64445350-64445369 | Msa0264510:CDS | 30.0% | |
| ATGAGCTACTCAAACAGATT+AGG | + | chr2_2:64444329-64444348 | Msa0264510:CDS | 35.0% | |
| CAAAGTAATGAGCTAAACGT+TGG | - | chr2_2:64444384-64444403 | None:intergenic | 35.0% | |
| ! | GAATTTTCTATGGTTTCCAG+TGG | + | chr2_2:64444602-64444621 | Msa0264510:CDS | 35.0% |
| AAACTTTCATTAAGACCTGG+TGG | + | chr2_2:64444640-64444659 | Msa0264510:CDS | 35.0% | |
| ATTCCTGTAATTCGAAGCTT+TGG | - | chr2_2:64444670-64444689 | None:intergenic | 35.0% | |
| ACAACTTCATTGCACAGAAA+TGG | + | chr2_2:64444788-64444807 | Msa0264510:CDS | 35.0% | |
| CAACTTCATTGCACAGAAAT+GGG | + | chr2_2:64444789-64444808 | Msa0264510:CDS | 35.0% | |
| CTATCTTGAGATCCTTTAGA+CGG | - | chr2_2:64444822-64444841 | None:intergenic | 35.0% | |
| TAAAGGATCTCAAGATAGAC+AGG | + | chr2_2:64444824-64444843 | Msa0264510:CDS | 35.0% | |
| AATCCAAAAGTCTTCTTCCA+TGG | + | chr2_2:64444955-64444974 | Msa0264510:CDS | 35.0% | |
| TTAAACCGAGTCAGGAAAAA+CGG | - | chr2_2:64445006-64445025 | None:intergenic | 35.0% | |
| ATCGCTGTTTGATATGTTTG+AGG | + | chr2_2:64445047-64445066 | Msa0264510:CDS | 35.0% | |
| !! | AATCAGGTTGGATTCTGATT+TGG | + | chr2_2:64445230-64445249 | Msa0264510:CDS | 35.0% |
| !!! | GATGGTAAGTGGGTTTTAAA+GGG | + | chr2_2:64445312-64445331 | Msa0264510:CDS | 35.0% |
| ATGAGCTACTCAAACAGATT+AGG | + | chr2_2:64444329-64444348 | Msa0264510:CDS | 35.0% | |
| CAAAGTAATGAGCTAAACGT+TGG | - | chr2_2:64444384-64444403 | None:intergenic | 35.0% | |
| ! | GAATTTTCTATGGTTTCCAG+TGG | + | chr2_2:64444602-64444621 | Msa0264510:CDS | 35.0% |
| AAACTTTCATTAAGACCTGG+TGG | + | chr2_2:64444640-64444659 | Msa0264510:CDS | 35.0% | |
| ATTCCTGTAATTCGAAGCTT+TGG | - | chr2_2:64444670-64444689 | None:intergenic | 35.0% | |
| ACAACTTCATTGCACAGAAA+TGG | + | chr2_2:64444788-64444807 | Msa0264510:CDS | 35.0% | |
| CAACTTCATTGCACAGAAAT+GGG | + | chr2_2:64444789-64444808 | Msa0264510:CDS | 35.0% | |
| CTATCTTGAGATCCTTTAGA+CGG | - | chr2_2:64444822-64444841 | None:intergenic | 35.0% | |
| TAAAGGATCTCAAGATAGAC+AGG | + | chr2_2:64444824-64444843 | Msa0264510:CDS | 35.0% | |
| AATCCAAAAGTCTTCTTCCA+TGG | + | chr2_2:64444955-64444974 | Msa0264510:CDS | 35.0% | |
| TTAAACCGAGTCAGGAAAAA+CGG | - | chr2_2:64445006-64445025 | None:intergenic | 35.0% | |
| ATCGCTGTTTGATATGTTTG+AGG | + | chr2_2:64445047-64445066 | Msa0264510:CDS | 35.0% | |
| !! | AATCAGGTTGGATTCTGATT+TGG | + | chr2_2:64445230-64445249 | Msa0264510:CDS | 35.0% |
| !!! | GATGGTAAGTGGGTTTTAAA+GGG | + | chr2_2:64445312-64445331 | Msa0264510:CDS | 35.0% |
| AAACCAAGAGGCTGATATGA+TGG | - | chr2_2:64444442-64444461 | None:intergenic | 40.0% | |
| GCATTTGTCATTCTCTGCAA+AGG | - | chr2_2:64444517-64444536 | None:intergenic | 40.0% | |
| AGGATTTAGACCTGCAGAAA+GGG | + | chr2_2:64444705-64444724 | Msa0264510:CDS | 40.0% | |
| TTCAATGCCACAGTTTCATC+AGG | - | chr2_2:64444895-64444914 | None:intergenic | 40.0% | |
| ! | ACTCCATGGAAGAAGACTTT+TGG | - | chr2_2:64444961-64444980 | None:intergenic | 40.0% |
| !!! | GTTTTTCCTGACTCGGTTTA+AGG | + | chr2_2:64445005-64445024 | Msa0264510:CDS | 40.0% |
| TATCAAACAGCGATGAGAAG+TGG | - | chr2_2:64445041-64445060 | None:intergenic | 40.0% | |
| GGTGAATGAAACCAAAGCAA+TGG | + | chr2_2:64445251-64445270 | Msa0264510:CDS | 40.0% | |
| AACCAAAGCAATGGTGAAGA+AGG | + | chr2_2:64445260-64445279 | Msa0264510:CDS | 40.0% | |
| TTCCTTCTTCACCATTGCTT+TGG | - | chr2_2:64445265-64445284 | None:intergenic | 40.0% | |
| ! | GATTTTGTAGTCGATGTGGA+TGG | + | chr2_2:64445294-64445313 | Msa0264510:CDS | 40.0% |
| !! | GGATGGTAAGTGGGTTTTAA+AGG | + | chr2_2:64445311-64445330 | Msa0264510:CDS | 40.0% |
| !!! | GTAAGTGGGTTTTAAAGGGA+TGG | + | chr2_2:64445316-64445335 | Msa0264510:CDS | 40.0% |
| !!! | TGGGTTTTAAAGGGATGGAA+AGG | + | chr2_2:64445321-64445340 | Msa0264510:CDS | 40.0% |
| AAACCAAGAGGCTGATATGA+TGG | - | chr2_2:64444442-64444461 | None:intergenic | 40.0% | |
| GCATTTGTCATTCTCTGCAA+AGG | - | chr2_2:64444517-64444536 | None:intergenic | 40.0% | |
| AGGATTTAGACCTGCAGAAA+GGG | + | chr2_2:64444705-64444724 | Msa0264510:CDS | 40.0% | |
| TTCAATGCCACAGTTTCATC+AGG | - | chr2_2:64444895-64444914 | None:intergenic | 40.0% | |
| ! | ACTCCATGGAAGAAGACTTT+TGG | - | chr2_2:64444961-64444980 | None:intergenic | 40.0% |
| !!! | GTTTTTCCTGACTCGGTTTA+AGG | + | chr2_2:64445005-64445024 | Msa0264510:CDS | 40.0% |
| TATCAAACAGCGATGAGAAG+TGG | - | chr2_2:64445041-64445060 | None:intergenic | 40.0% | |
| GGTGAATGAAACCAAAGCAA+TGG | + | chr2_2:64445251-64445270 | Msa0264510:CDS | 40.0% | |
| AACCAAAGCAATGGTGAAGA+AGG | + | chr2_2:64445260-64445279 | Msa0264510:CDS | 40.0% | |
| TTCCTTCTTCACCATTGCTT+TGG | - | chr2_2:64445265-64445284 | None:intergenic | 40.0% | |
| ! | GATTTTGTAGTCGATGTGGA+TGG | + | chr2_2:64445294-64445313 | Msa0264510:CDS | 40.0% |
| !! | GGATGGTAAGTGGGTTTTAA+AGG | + | chr2_2:64445311-64445330 | Msa0264510:CDS | 40.0% |
| !!! | GTAAGTGGGTTTTAAAGGGA+TGG | + | chr2_2:64445316-64445335 | Msa0264510:CDS | 40.0% |
| !!! | TGGGTTTTAAAGGGATGGAA+AGG | + | chr2_2:64445321-64445340 | Msa0264510:CDS | 40.0% |
| ! | GAAAGTTTTCTGACGAGGCA+CGG | - | chr2_2:64444628-64444647 | None:intergenic | 45.0% |
| ! | CCTGTAATTCGAAGCTTTGG+AGG | - | chr2_2:64444667-64444686 | None:intergenic | 45.0% |
| CCTCCAAAGCTTCGAATTAC+AGG | + | chr2_2:64444664-64444683 | Msa0264510:CDS | 45.0% | |
| CTTTCTGCAGGTCTAAATCC+TGG | - | chr2_2:64444706-64444725 | None:intergenic | 45.0% | |
| CAGGATTTAGACCTGCAGAA+AGG | + | chr2_2:64444704-64444723 | Msa0264510:CDS | 45.0% | |
| ATTTAGACCTGCAGAAAGGG+TGG | + | chr2_2:64444708-64444727 | Msa0264510:CDS | 45.0% | |
| ATGGGAAACCATCCGTCTAA+AGG | + | chr2_2:64444807-64444826 | Msa0264510:CDS | 45.0% | |
| CTTGAGATCCTTTAGACGGA+TGG | - | chr2_2:64444818-64444837 | None:intergenic | 45.0% | |
| GAACCTTCCTGATGAAACTG+TGG | + | chr2_2:64444885-64444904 | Msa0264510:CDS | 45.0% | |
| ATGCCACAGTTTCATCAGGA+AGG | - | chr2_2:64444891-64444910 | None:intergenic | 45.0% | |
| AGCTTCAACACAGCTTCTCT+TGG | - | chr2_2:64444922-64444941 | None:intergenic | 45.0% | |
| AAGCTGTGTTGAAGCTGATC+AGG | + | chr2_2:64444926-64444945 | Msa0264510:CDS | 45.0% | |
| TTCTTCCATGGAGTTGCCAA+TGG | + | chr2_2:64444967-64444986 | Msa0264510:CDS | 45.0% | |
| AACTTCCATTGGCAACTCCA+TGG | - | chr2_2:64444975-64444994 | None:intergenic | 45.0% | |
| ATGCTTGAGAGAGGGTTGTT+TGG | + | chr2_2:64445102-64445121 | Msa0264510:CDS | 45.0% | |
| TTGAGAGAGGGTTGTTTGGA+AGG | + | chr2_2:64445106-64445125 | Msa0264510:CDS | 45.0% | |
| TGAGAGAGGGTTGTTTGGAA+GGG | + | chr2_2:64445107-64445126 | Msa0264510:CDS | 45.0% | |
| ! | TAGCTTGTGAGGGAGCAAAA+AGG | + | chr2_2:64445145-64445164 | Msa0264510:CDS | 45.0% |
| AGCTTGTGAGGGAGCAAAAA+GGG | + | chr2_2:64445146-64445165 | Msa0264510:CDS | 45.0% | |
| AGGGAGCAAAAAGGGTTGAA+AGG | + | chr2_2:64445154-64445173 | Msa0264510:CDS | 45.0% | |
| TGGGTTCAAGCAAATCAGGT+TGG | + | chr2_2:64445218-64445237 | Msa0264510:CDS | 45.0% | |
| TAGTCGATGTGGATGGTAAG+TGG | + | chr2_2:64445301-64445320 | Msa0264510:CDS | 45.0% | |
| AGTCGATGTGGATGGTAAGT+GGG | + | chr2_2:64445302-64445321 | Msa0264510:CDS | 45.0% | |
| ! | GAAAGTTTTCTGACGAGGCA+CGG | - | chr2_2:64444628-64444647 | None:intergenic | 45.0% |
| ! | CCTGTAATTCGAAGCTTTGG+AGG | - | chr2_2:64444667-64444686 | None:intergenic | 45.0% |
| CCTCCAAAGCTTCGAATTAC+AGG | + | chr2_2:64444664-64444683 | Msa0264510:CDS | 45.0% | |
| CTTTCTGCAGGTCTAAATCC+TGG | - | chr2_2:64444706-64444725 | None:intergenic | 45.0% | |
| CAGGATTTAGACCTGCAGAA+AGG | + | chr2_2:64444704-64444723 | Msa0264510:CDS | 45.0% | |
| ATTTAGACCTGCAGAAAGGG+TGG | + | chr2_2:64444708-64444727 | Msa0264510:CDS | 45.0% | |
| ATGGGAAACCATCCGTCTAA+AGG | + | chr2_2:64444807-64444826 | Msa0264510:CDS | 45.0% | |
| CTTGAGATCCTTTAGACGGA+TGG | - | chr2_2:64444818-64444837 | None:intergenic | 45.0% | |
| GAACCTTCCTGATGAAACTG+TGG | + | chr2_2:64444885-64444904 | Msa0264510:CDS | 45.0% | |
| ATGCCACAGTTTCATCAGGA+AGG | - | chr2_2:64444891-64444910 | None:intergenic | 45.0% | |
| AGCTTCAACACAGCTTCTCT+TGG | - | chr2_2:64444922-64444941 | None:intergenic | 45.0% | |
| AAGCTGTGTTGAAGCTGATC+AGG | + | chr2_2:64444926-64444945 | Msa0264510:CDS | 45.0% | |
| TTCTTCCATGGAGTTGCCAA+TGG | + | chr2_2:64444967-64444986 | Msa0264510:CDS | 45.0% | |
| AACTTCCATTGGCAACTCCA+TGG | - | chr2_2:64444975-64444994 | None:intergenic | 45.0% | |
| ATGCTTGAGAGAGGGTTGTT+TGG | + | chr2_2:64445102-64445121 | Msa0264510:CDS | 45.0% | |
| TTGAGAGAGGGTTGTTTGGA+AGG | + | chr2_2:64445106-64445125 | Msa0264510:CDS | 45.0% | |
| TGAGAGAGGGTTGTTTGGAA+GGG | + | chr2_2:64445107-64445126 | Msa0264510:CDS | 45.0% | |
| ! | TAGCTTGTGAGGGAGCAAAA+AGG | + | chr2_2:64445145-64445164 | Msa0264510:CDS | 45.0% |
| AGCTTGTGAGGGAGCAAAAA+GGG | + | chr2_2:64445146-64445165 | Msa0264510:CDS | 45.0% | |
| AGGGAGCAAAAAGGGTTGAA+AGG | + | chr2_2:64445154-64445173 | Msa0264510:CDS | 45.0% | |
| TGGGTTCAAGCAAATCAGGT+TGG | + | chr2_2:64445218-64445237 | Msa0264510:CDS | 45.0% | |
| TAGTCGATGTGGATGGTAAG+TGG | + | chr2_2:64445301-64445320 | Msa0264510:CDS | 45.0% | |
| AGTCGATGTGGATGGTAAGT+GGG | + | chr2_2:64445302-64445321 | Msa0264510:CDS | 45.0% | |
| CTGTAGCGAGCTACGATCAA+AGG | + | chr2_2:64444299-64444318 | Msa0264510:CDS | 50.0% | |
| ! | AGGCAACACTCTTCGCCTTT+TGG | + | chr2_2:64444349-64444368 | Msa0264510:CDS | 50.0% |
| ! | CACTCTTCGCCTTTTGGCAA+TGG | + | chr2_2:64444355-64444374 | Msa0264510:CDS | 50.0% |
| CGTTGGAGTCCATTGCCAAA+AGG | - | chr2_2:64444367-64444386 | None:intergenic | 50.0% | |
| ACGCCATCATATCAGCCTCT+TGG | + | chr2_2:64444436-64444455 | Msa0264510:CDS | 50.0% | |
| CCAGCAGTTGACAAACCAAG+AGG | - | chr2_2:64444454-64444473 | None:intergenic | 50.0% | |
| !! | CCTCTTGGTTTGTCAACTGC+TGG | + | chr2_2:64444451-64444470 | Msa0264510:CDS | 50.0% |
| AAAGGGTGGAGGAAACTGGA+CGG | + | chr2_2:64444722-64444741 | Msa0264510:CDS | 50.0% | |
| CGGTGCGCTATAACTTCCAT+TGG | - | chr2_2:64444986-64445005 | None:intergenic | 50.0% | |
| GTGCTTCCTTAAACCGAGTC+AGG | - | chr2_2:64445014-64445033 | None:intergenic | 50.0% | |
| AGAGGTCGATGCTTGAGAGA+GGG | + | chr2_2:64445094-64445113 | Msa0264510:CDS | 50.0% | |
| TGCCACTGCTTGTAAGTCTC+AGG | - | chr2_2:64445180-64445199 | None:intergenic | 50.0% | |
| TGAGACTTACAAGCAGTGGC+AGG | + | chr2_2:64445179-64445198 | Msa0264510:CDS | 50.0% | |
| AGGTCAGGAACAAGAGAGCT+GGG | + | chr2_2:64445199-64445218 | Msa0264510:CDS | 50.0% | |
| GAGCTGGGTTCAAGCAAATC+AGG | + | chr2_2:64445214-64445233 | Msa0264510:CDS | 50.0% | |
| CTGTAGCGAGCTACGATCAA+AGG | + | chr2_2:64444299-64444318 | Msa0264510:CDS | 50.0% | |
| ! | AGGCAACACTCTTCGCCTTT+TGG | + | chr2_2:64444349-64444368 | Msa0264510:CDS | 50.0% |
| ! | CACTCTTCGCCTTTTGGCAA+TGG | + | chr2_2:64444355-64444374 | Msa0264510:CDS | 50.0% |
| CGTTGGAGTCCATTGCCAAA+AGG | - | chr2_2:64444367-64444386 | None:intergenic | 50.0% | |
| ACGCCATCATATCAGCCTCT+TGG | + | chr2_2:64444436-64444455 | Msa0264510:CDS | 50.0% | |
| CCAGCAGTTGACAAACCAAG+AGG | - | chr2_2:64444454-64444473 | None:intergenic | 50.0% | |
| !! | CCTCTTGGTTTGTCAACTGC+TGG | + | chr2_2:64444451-64444470 | Msa0264510:CDS | 50.0% |
| AAAGGGTGGAGGAAACTGGA+CGG | + | chr2_2:64444722-64444741 | Msa0264510:CDS | 50.0% | |
| CGGTGCGCTATAACTTCCAT+TGG | - | chr2_2:64444986-64445005 | None:intergenic | 50.0% | |
| GTGCTTCCTTAAACCGAGTC+AGG | - | chr2_2:64445014-64445033 | None:intergenic | 50.0% | |
| AGAGGTCGATGCTTGAGAGA+GGG | + | chr2_2:64445094-64445113 | Msa0264510:CDS | 50.0% | |
| TGCCACTGCTTGTAAGTCTC+AGG | - | chr2_2:64445180-64445199 | None:intergenic | 50.0% | |
| TGAGACTTACAAGCAGTGGC+AGG | + | chr2_2:64445179-64445198 | Msa0264510:CDS | 50.0% | |
| AGGTCAGGAACAAGAGAGCT+GGG | + | chr2_2:64445199-64445218 | Msa0264510:CDS | 50.0% | |
| GAGCTGGGTTCAAGCAAATC+AGG | + | chr2_2:64445214-64445233 | Msa0264510:CDS | 50.0% | |
| GGAATTGAGCTTCCTCAGCC+AGG | + | chr2_2:64444685-64444704 | Msa0264510:CDS | 55.0% | |
| GCAGGTCTAAATCCTGGCTG+AGG | - | chr2_2:64444700-64444719 | None:intergenic | 55.0% | |
| TAGACCTGCAGAAAGGGTGG+AGG | + | chr2_2:64444711-64444730 | Msa0264510:CDS | 55.0% | |
| GTTTCCTCCACCCTTTCTGC+AGG | - | chr2_2:64444718-64444737 | None:intergenic | 55.0% | |
| GCAGAAAGGGTGGAGGAAAC+TGG | + | chr2_2:64444718-64444737 | Msa0264510:CDS | 55.0% | |
| !! | GCGCACCGTTTTTCCTGACT+CGG | + | chr2_2:64444998-64445017 | Msa0264510:CDS | 55.0% |
| CAGAGGTCGATGCTTGAGAG+AGG | + | chr2_2:64445093-64445112 | Msa0264510:CDS | 55.0% | |
| GGCCTGAGACTTACAAGCAG+TGG | + | chr2_2:64445175-64445194 | Msa0264510:CDS | 55.0% | |
| CTTACAAGCAGTGGCAGGTC+AGG | + | chr2_2:64445184-64445203 | Msa0264510:CDS | 55.0% | |
| CAGGTCAGGAACAAGAGAGC+TGG | + | chr2_2:64445198-64445217 | Msa0264510:CDS | 55.0% | |
| GGAATTGAGCTTCCTCAGCC+AGG | + | chr2_2:64444685-64444704 | Msa0264510:CDS | 55.0% | |
| GCAGGTCTAAATCCTGGCTG+AGG | - | chr2_2:64444700-64444719 | None:intergenic | 55.0% | |
| TAGACCTGCAGAAAGGGTGG+AGG | + | chr2_2:64444711-64444730 | Msa0264510:CDS | 55.0% | |
| GTTTCCTCCACCCTTTCTGC+AGG | - | chr2_2:64444718-64444737 | None:intergenic | 55.0% | |
| GCAGAAAGGGTGGAGGAAAC+TGG | + | chr2_2:64444718-64444737 | Msa0264510:CDS | 55.0% | |
| !! | GCGCACCGTTTTTCCTGACT+CGG | + | chr2_2:64444998-64445017 | Msa0264510:CDS | 55.0% |
| CAGAGGTCGATGCTTGAGAG+AGG | + | chr2_2:64445093-64445112 | Msa0264510:CDS | 55.0% | |
| GGCCTGAGACTTACAAGCAG+TGG | + | chr2_2:64445175-64445194 | Msa0264510:CDS | 55.0% | |
| CTTACAAGCAGTGGCAGGTC+AGG | + | chr2_2:64445184-64445203 | Msa0264510:CDS | 55.0% | |
| CAGGTCAGGAACAAGAGAGC+TGG | + | chr2_2:64445198-64445217 | Msa0264510:CDS | 55.0% | |
| !! | CGAAGCTTTGGAGGACCACC+AGG | - | chr2_2:64444658-64444677 | None:intergenic | 60.0% |
| TGCCTCGTGAAGACACGCAG+AGG | + | chr2_2:64445076-64445095 | Msa0264510:CDS | 60.0% | |
| GACCTCTGCGTGTCTTCACG+AGG | - | chr2_2:64445081-64445100 | None:intergenic | 60.0% | |
| !! | CGAAGCTTTGGAGGACCACC+AGG | - | chr2_2:64444658-64444677 | None:intergenic | 60.0% |
| TGCCTCGTGAAGACACGCAG+AGG | + | chr2_2:64445076-64445095 | Msa0264510:CDS | 60.0% | |
| GACCTCTGCGTGTCTTCACG+AGG | - | chr2_2:64445081-64445100 | None:intergenic | 60.0% | |
| TTCTGACGAGGCACGGCCAC+TGG | - | chr2_2:64444621-64444640 | None:intergenic | 65.0% | |
| TTCTGACGAGGCACGGCCAC+TGG | - | chr2_2:64444621-64444640 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 64444277 | 64445383 | 64444277 | ID=Msa0264510;Name=Msa0264510 |
| chr2_2 | mRNA | 64444277 | 64445383 | 64444277 | ID=Msa0264510-mRNA-1;Parent=Msa0264510;Name=Msa0264510-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|368 |
| chr2_2 | exon | 64444277 | 64445383 | 64444277 | ID=Msa0264510-mRNA-1:exon:20122;Parent=Msa0264510-mRNA-1 |
| chr2_2 | CDS | 64444277 | 64445383 | 64444277 | ID=Msa0264510-mRNA-1:cds;Parent=Msa0264510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
