AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0281510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0281510 MtrunA17_Chr2g0295911 96.995 366 7 2 1 362 1130 1495 0.0 727
Msa0281510 MtrunA17_Chr2g0295911 25.822 213 139 5 153 360 664 862 1.00e-11 66.6
Msa0281510 MtrunA17_Chr2g0295901 94.262 366 17 2 1 362 1127 1492 0.0 707
Msa0281510 MtrunA17_Chr2g0295901 26.190 210 142 5 153 360 664 862 2.19e-11 65.9
Msa0281510 MtrunA17_Chr8g0363771 90.984 366 29 2 1 362 1127 1492 0.0 689
Msa0281510 MtrunA17_Chr8g0363771 20.991 343 236 8 36 361 534 858 6.98e-11 64.3
Msa0281510 MtrunA17_Chr2g0295921 94.247 365 18 1 1 362 1143 1507 0.0 686
Msa0281510 MtrunA17_Chr2g0295921 24.186 215 140 5 153 360 676 874 5.41e-11 64.3
Msa0281510 MtrunA17_Chr1g0195691 72.131 366 98 2 1 362 1142 1507 3.42e-180 540
Msa0281510 MtrunA17_Chr1g0195691 23.853 218 147 5 148 360 668 871 3.21e-11 65.1
Msa0281510 MtrunA17_Chr8g0359291 52.316 367 170 3 1 362 279 645 4.90e-135 400
Msa0281510 MtrunA17_Chr6g0463391 51.499 367 172 4 1 362 283 648 1.85e-131 390
Msa0281510 MtrunA17_Chr6g0463141 51.226 367 174 3 1 362 1122 1488 1.95e-129 404
Msa0281510 MtrunA17_Chr6g0463181 51.499 367 173 3 1 362 1081 1447 1.43e-128 402
Msa0281510 MtrunA17_Chr6g0463181 24.651 215 151 2 148 361 625 829 2.87e-13 71.6
Msa0281510 MtrunA17_Chr8g0353541 50.546 366 177 2 1 362 697 1062 9.51e-127 390
Msa0281510 MtrunA17_Chr8g0353541 24.186 215 150 3 148 360 226 429 4.30e-11 64.7
Msa0281510 MtrunA17_Chr6g0463201 52.316 367 169 4 1 362 1103 1468 1.55e-126 396
Msa0281510 MtrunA17_Chr6g0463151 50.954 367 175 3 1 362 915 1281 6.22e-126 392
Msa0281510 MtrunA17_Chr6g0463151 23.721 215 151 3 148 360 456 659 1.81e-12 68.9
Msa0281510 MtrunA17_Chr6g0463131 51.366 366 173 3 2 362 1099 1464 8.43e-126 394
Msa0281510 MtrunA17_Chr6g0463131 25.641 234 162 3 129 360 619 842 4.37e-17 83.2
Msa0281510 MtrunA17_Chr6g0463121 50.681 367 176 3 1 362 1097 1463 9.82e-125 391
Msa0281510 MtrunA17_Chr6g0463121 25.926 216 147 3 148 361 638 842 1.82e-15 78.2
Msa0281510 MtrunA17_Chr8g0341751 49.180 366 182 2 1 362 913 1278 1.85e-123 385
Msa0281510 MtrunA17_Chr6g0472531 49.454 366 180 3 2 362 1049 1414 3.92e-123 386
Msa0281510 MtrunA17_Chr6g0472531 25.907 193 130 3 148 338 589 770 1.15e-13 72.8
Msa0281510 MtrunA17_Chr5g0445741 50.136 367 177 3 2 362 1120 1486 8.22e-123 387
Msa0281510 MtrunA17_Chr5g0445741 24.756 307 200 10 69 360 561 851 3.97e-12 68.2
Msa0281510 MtrunA17_Chr5g0412721 50.136 367 177 3 2 362 1115 1481 3.68e-122 385
Msa0281510 MtrunA17_Chr5g0412721 24.000 325 221 9 47 360 531 840 2.37e-11 65.5
Msa0281510 MtrunA17_Chr5g0445671 49.454 366 179 3 2 361 729 1094 3.92e-122 378
Msa0281510 MtrunA17_Chr5g0445671 24.756 307 200 10 69 360 170 460 6.50e-11 64.3
Msa0281510 MtrunA17_Chr3g0101441 48.634 366 183 3 2 362 932 1297 4.14e-122 382
Msa0281510 MtrunA17_Chr3g0101441 25.490 306 199 8 69 360 363 653 8.48e-15 76.3
Msa0281510 MtrunA17_Chr3g0101461 48.361 366 184 3 2 362 932 1297 7.70e-122 381
Msa0281510 MtrunA17_Chr3g0101461 25.817 306 198 8 69 360 363 653 1.48e-14 75.5
Msa0281510 MtrunA17_Chr8g0353781 51.226 367 173 3 1 362 1080 1445 3.25e-121 382
Msa0281510 MtrunA17_Chr8g0353781 24.107 224 153 3 148 367 617 827 2.08e-11 65.9
Msa0281510 MtrunA17_Chr3g0101471 47.814 366 186 3 2 362 930 1295 5.29e-121 379
Msa0281510 MtrunA17_Chr3g0101471 27.928 222 147 4 140 360 442 651 2.47e-14 74.7
Msa0281510 MtrunA17_Chr8g0341801 48.774 367 182 3 1 362 56 421 5.75e-121 357
Msa0281510 MtrunA17_Chr8g0341761 49.864 367 178 3 1 362 1074 1439 5.98e-121 381
Msa0281510 MtrunA17_Chr3g0101481 49.454 366 180 3 2 362 1125 1490 6.54e-120 379
Msa0281510 MtrunA17_Chr3g0101481 24.549 277 192 8 86 360 584 845 6.60e-12 67.4
Msa0281510 MtrunA17_Chr8g0337121 51.366 366 173 3 2 362 1129 1494 1.13e-119 378
Msa0281510 MtrunA17_Chr8g0337121 23.767 223 158 4 140 360 636 848 2.29e-11 65.9
Msa0281510 MtrunA17_Chr8g0341851 49.319 367 181 3 1 362 1089 1455 1.17e-119 377
Msa0281510 MtrunA17_Chr8g0341851 22.936 218 156 3 144 360 621 827 1.10e-11 66.6
Msa0281510 MtrunA17_Chr8g0337191 51.093 366 174 3 2 362 1109 1474 2.49e-119 377
Msa0281510 MtrunA17_Chr8g0337191 23.767 223 158 4 140 360 616 828 1.16e-11 66.6
Msa0281510 MtrunA17_Chr6g0484351 50.546 366 177 2 1 362 281 646 4.21e-118 357
Msa0281510 MtrunA17_Chr6g0463211 48.000 400 169 7 1 362 1136 1534 1.13e-117 373
Msa0281510 MtrunA17_Chr6g0463211 24.096 249 164 7 98 338 626 857 4.15e-14 74.3
Msa0281510 MtrunA17_Chr1g0183191 50.546 366 176 3 2 362 1154 1519 4.37e-117 371
Msa0281510 MtrunA17_Chr1g0183191 22.590 332 218 10 50 360 551 864 2.16e-12 68.9
Msa0281510 MtrunA17_Chr7g0262191 50.000 366 178 3 2 362 1154 1519 2.12e-115 367
Msa0281510 MtrunA17_Chr7g0262191 24.342 304 205 9 69 360 570 860 1.18e-12 69.7
Msa0281510 MtrunA17_Chr8g0376961 48.641 368 184 3 2 364 1068 1435 2.23e-115 365
Msa0281510 MtrunA17_Chr8g0376961 26.104 249 162 9 98 338 553 787 4.16e-12 67.8
Msa0281510 MtrunA17_Chr5g0412941 49.693 326 143 4 43 362 10 320 2.46e-115 338
Msa0281510 MtrunA17_Chr3g0085281 49.180 366 178 4 2 362 1094 1456 8.54e-115 364
Msa0281510 MtrunA17_Chr3g0085281 26.693 251 160 10 98 338 557 793 1.68e-11 66.2
Msa0281510 MtrunA17_Chr8g0341811 46.448 366 177 3 1 362 916 1266 2.82e-114 360
Msa0281510 MtrunA17_Chr8g0341811 26.047 215 146 5 148 360 455 658 3.55e-11 65.1
Msa0281510 MtrunA17_Chr1g0202221 49.180 366 154 4 1 362 1033 1370 3.58e-114 362
Msa0281510 MtrunA17_Chr1g0202221 23.887 247 165 5 98 338 589 818 5.94e-15 76.6
Msa0281510 MtrunA17_Chr6g0471281 49.454 366 180 3 2 362 1099 1464 1.73e-111 355
Msa0281510 MtrunA17_Chr6g0471281 24.479 192 134 2 148 338 639 820 1.57e-12 69.3
Msa0281510 MtrunA17_Chr5g0445701 55.696 237 95 3 136 362 1 237 3.18e-91 274
Msa0281510 MtrunA17_Chr2g0285731 42.547 369 203 5 2 361 1103 1471 1.42e-82 275
Msa0281510 MtrunA17_Chr2g0285731 23.394 218 151 3 148 361 633 838 1.41e-11 66.2
Msa0281510 MtrunA17_Chr3g0080981 41.389 360 203 3 2 353 1100 1459 3.16e-82 273
Msa0281510 MtrunA17_Chr3g0080981 23.746 299 212 7 66 361 554 839 1.32e-12 69.7
Msa0281510 MtrunA17_Chr3g0080941 41.620 358 201 3 2 351 1101 1458 7.88e-82 272
Msa0281510 MtrunA17_Chr3g0080941 23.000 300 213 6 66 361 554 839 2.34e-12 68.9
Msa0281510 MtrunA17_Chr2g0333911 41.042 307 175 4 59 361 703 1007 1.44e-73 246
Msa0281510 MtrunA17_Chr2g0333911 28.372 215 138 4 146 354 176 380 2.52e-15 77.8
Msa0281510 MtrunA17_Chr6g0481921 33.195 241 151 6 129 361 269 507 3.47e-38 145
Msa0281510 MtrunA17_Chr6g0481921 32.500 240 153 5 129 360 925 1163 5.18e-35 136
Msa0281510 MtrunA17_Chr6g0452041 35.193 233 140 5 129 352 1017 1247 8.51e-38 144
Msa0281510 MtrunA17_Chr6g0452041 31.967 244 150 6 129 361 359 597 1.65e-32 129
Msa0281510 MtrunA17_Chr5g0433051 34.043 235 150 3 129 359 464 697 1.53e-37 143
Msa0281510 MtrunA17_Chr6g0452141 35.931 231 137 5 129 350 1015 1243 1.86e-37 144
Msa0281510 MtrunA17_Chr6g0452141 27.577 388 236 14 2 361 228 598 3.44e-30 122
Msa0281510 MtrunA17_Chr6g0451881 34.764 233 141 5 129 352 1005 1235 3.07e-37 143
Msa0281510 MtrunA17_Chr6g0451881 32.099 243 149 6 129 360 359 596 9.83e-32 127
Msa0281510 MtrunA17_Chr4g0069411 33.473 239 151 4 129 360 1048 1285 3.37e-37 143
Msa0281510 MtrunA17_Chr4g0069411 35.945 217 132 4 128 338 393 608 1.46e-32 129
Msa0281510 MtrunA17_Chr6g0452171 35.193 233 140 5 129 352 1018 1248 3.51e-37 143
Msa0281510 MtrunA17_Chr6g0452171 32.377 244 149 6 129 361 359 597 1.59e-31 126
Msa0281510 MtrunA17_Chr6g0451911 35.345 232 140 5 129 352 1013 1242 3.75e-37 143
Msa0281510 MtrunA17_Chr6g0451911 29.918 244 155 6 129 361 359 597 1.45e-29 120
Msa0281510 MtrunA17_Chr6g0452071 35.065 231 139 5 129 350 211 439 8.70e-37 138
Msa0281510 MtrunA17_Chr1g0193991 35.897 234 135 5 128 351 386 614 9.15e-37 142
Msa0281510 MtrunA17_Chr1g0193991 34.025 241 150 5 129 361 1042 1281 5.63e-33 130
Msa0281510 MtrunA17_Chr2g0285311 35.023 217 132 5 129 338 367 581 1.32e-36 141
Msa0281510 MtrunA17_Chr2g0285311 32.917 240 152 5 129 360 1023 1261 1.57e-34 135
Msa0281510 MtrunA17_Chr2g0285301 35.023 217 132 5 129 338 362 576 3.22e-36 140
Msa0281510 MtrunA17_Chr2g0285301 33.333 240 151 5 129 360 1019 1257 1.85e-33 132
Msa0281510 MtrunA17_Chr2g0285191 34.862 218 133 5 128 338 395 610 4.69e-36 139
Msa0281510 MtrunA17_Chr2g0285191 33.750 240 150 5 129 360 1051 1289 4.84e-34 134
Msa0281510 MtrunA17_Chr3g0123411 36.864 236 134 5 129 354 903 1133 6.59e-36 139
Msa0281510 MtrunA17_Chr3g0123411 31.048 248 156 5 127 364 245 487 1.35e-25 108
Msa0281510 MtrunA17_Chr3g0119381 28.329 353 232 11 2 338 264 611 1.36e-35 138
Msa0281510 MtrunA17_Chr3g0119381 32.083 240 153 5 129 360 1055 1292 1.26e-31 126
Msa0281510 MtrunA17_Chr7g0233901 34.188 234 142 5 129 352 993 1224 1.38e-35 138
Msa0281510 MtrunA17_Chr7g0233901 31.557 244 151 6 129 361 355 593 1.12e-33 132
Msa0281510 MtrunA17_Chr1g0194031 35.294 221 128 5 128 338 381 596 1.75e-35 137
Msa0281510 MtrunA17_Chr6g0452111 33.906 233 143 5 129 352 1016 1246 2.07e-35 137
Msa0281510 MtrunA17_Chr6g0452111 31.046 306 187 10 71 361 308 604 2.75e-33 131
Msa0281510 MtrunA17_Chr4g0069361 29.248 359 221 12 2 338 243 590 2.60e-35 137
Msa0281510 MtrunA17_Chr4g0069361 33.891 239 150 4 129 360 1034 1271 4.25e-35 137
Msa0281510 MtrunA17_Chr6g0452061 34.335 233 142 5 129 352 527 757 2.77e-35 137
Msa0281510 MtrunA17_Chr6g0452061 33.663 101 66 1 262 361 18 118 2.60e-11 65.1
Msa0281510 MtrunA17_Chr5g0410921 30.861 337 192 10 28 351 906 1214 3.11e-35 137
Msa0281510 MtrunA17_Chr5g0410921 30.738 244 153 6 129 361 354 592 1.78e-28 117
Msa0281510 MtrunA17_Chr4g0069401 29.545 352 229 11 2 338 238 585 3.45e-35 137
Msa0281510 MtrunA17_Chr4g0069401 33.891 239 150 4 129 360 1032 1269 1.46e-30 123
Msa0281510 MtrunA17_Chr4g0061601 30.667 300 192 8 68 359 330 621 4.58e-35 135
Msa0281510 MtrunA17_Chr4g0039821 31.313 297 188 7 73 359 978 1268 6.13e-35 136
Msa0281510 MtrunA17_Chr4g0039821 33.484 221 132 5 128 338 373 588 9.41e-32 127
Msa0281510 MtrunA17_Chr4g0069351 27.966 354 232 9 2 338 243 590 7.91e-35 136
Msa0281510 MtrunA17_Chr4g0069351 28.981 314 199 7 54 360 975 1271 7.30e-34 133
Msa0281510 MtrunA17_Chr8g0371961 50.394 127 42 2 133 256 4 112 6.84e-34 122
Msa0281510 MtrunA17_Chr4g0041871 31.313 297 187 9 74 361 955 1243 1.72e-33 132
Msa0281510 MtrunA17_Chr4g0041871 31.579 285 177 7 79 351 290 568 5.13e-32 127
Msa0281510 MtrunA17_Chr1g0194001 33.597 253 150 5 115 350 121 372 2.07e-33 127
Msa0281510 MtrunA17_Chr3g0138211 34.562 217 133 5 129 338 394 608 5.38e-33 130
Msa0281510 MtrunA17_Chr3g0138211 31.746 252 150 6 129 360 1024 1273 2.32e-31 125
Msa0281510 MtrunA17_Chr7g0264631 33.884 242 149 6 129 361 424 663 6.37e-33 130
Msa0281510 MtrunA17_Chr7g0264631 30.579 242 159 5 119 353 1069 1308 2.14e-32 129
Msa0281510 MtrunA17_Chr5g0433071 34.043 235 150 3 129 359 466 699 6.46e-33 130
Msa0281510 MtrunA17_Chr1g0178481 30.396 227 152 2 129 349 378 604 1.10e-32 129
Msa0281510 MtrunA17_Chr1g0180601 30.603 232 152 5 129 353 1053 1282 2.26e-32 129
Msa0281510 MtrunA17_Chr1g0180601 33.058 242 151 6 129 361 397 636 1.82e-31 126
Msa0281510 MtrunA17_Chr3g0128381 33.473 239 142 7 128 351 387 623 1.20e-31 126
Msa0281510 MtrunA17_Chr5g0412741 31.507 292 167 9 92 362 416 695 4.69e-31 124
Msa0281510 MtrunA17_Chr6g0453051 34.199 231 143 5 129 352 1006 1234 7.09e-31 124
Msa0281510 MtrunA17_Chr6g0453051 29.918 244 156 5 128 361 360 598 3.79e-30 122
Msa0281510 MtrunA17_Chr7g0227391 30.453 243 156 6 129 361 423 662 1.13e-30 123
Msa0281510 MtrunA17_Chr8g0344651 28.829 333 218 11 44 361 505 833 1.38e-30 123
Msa0281510 MtrunA17_Chr8g0344651 29.752 242 155 6 131 361 1242 1479 1.57e-29 120
Msa0281510 MtrunA17_Chr6g0452081 33.803 213 122 5 129 331 25 228 1.71e-30 116
Msa0281510 MtrunA17_Chr1g0156821 30.041 243 154 6 129 360 992 1229 6.16e-30 121
Msa0281510 MtrunA17_Chr1g0156821 29.707 239 156 3 129 359 371 605 2.68e-29 119
Msa0281510 MtrunA17_Chr8g0366481 33.469 245 148 6 117 351 372 611 2.97e-29 119
Msa0281510 MtrunA17_Chr7g0222781 32.090 268 156 7 115 361 1129 1391 2.76e-28 117
Msa0281510 MtrunA17_Chr7g0222781 28.870 239 164 3 128 361 403 640 8.17e-25 106
Msa0281510 MtrunA17_Chr6g0474071 29.123 285 183 6 93 359 165 448 5.47e-28 114
Msa0281510 MtrunA17_Chr6g0486841 29.412 238 153 5 129 356 1000 1232 2.10e-27 114
Msa0281510 MtrunA17_Chr6g0486841 26.941 219 147 4 129 338 357 571 2.09e-22 99.4
Msa0281510 MtrunA17_Chr3g0128391 29.904 311 148 11 117 359 240 548 3.29e-27 112
Msa0281510 MtrunA17_Chr1g0212701 31.837 245 151 6 128 361 1144 1383 3.82e-27 113
Msa0281510 MtrunA17_Chr1g0212701 28.870 239 164 3 128 361 397 634 4.90e-25 107
Msa0281510 MtrunA17_Chr8g0393151 28.295 258 158 9 119 363 10 253 1.65e-17 81.3
Msa0281510 MtrunA17_Chr6g0452051 38.000 100 56 3 129 223 280 378 3.05e-13 70.5
Msa0281510 MtrunA17_Chr8g0366451 33.333 141 79 5 129 259 313 448 2.23e-12 68.2
Msa0281510 MtrunA17_Chr5g0412921 26.394 269 176 9 98 360 579 831 8.58e-12 67.0
Msa0281510 MtrunA17_Chr8g0366471 30.693 101 69 1 262 361 23 123 2.42e-11 61.2
Msa0281510 MtrunA17_Chr1g0176451 26.087 230 122 11 147 347 23 233 4.00e-11 64.3
Msa0281510 MtrunA17_Chr3g0124171 24.586 362 223 15 7 336 307 650 7.81e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0281510 AT3G62700.1 73.224 366 94 2 1 362 1166 1531 0.0 544
Msa0281510 AT2G47800.1 74.317 366 90 2 1 362 1143 1508 0.0 543
Msa0281510 AT3G21250.6 51.913 366 172 2 1 362 668 1033 1.34e-128 394
Msa0281510 AT3G21250.6 25.106 235 140 7 140 360 191 403 1.77e-12 69.3
Msa0281510 AT3G21250.3 51.913 366 172 2 1 362 668 1033 1.34e-128 394
Msa0281510 AT3G21250.3 25.106 235 140 7 140 360 191 403 1.77e-12 69.3
Msa0281510 AT3G21250.2 51.913 366 172 2 1 362 1084 1449 5.91e-126 395
Msa0281510 AT3G21250.2 25.106 235 140 7 140 360 607 819 1.17e-12 70.1
Msa0281510 AT3G21250.4 51.913 366 172 2 1 362 1090 1455 7.30e-126 395
Msa0281510 AT3G21250.4 25.106 235 140 7 140 360 613 825 1.08e-12 70.1
Msa0281510 AT3G21250.1 51.913 366 172 2 1 362 1073 1438 8.26e-126 394
Msa0281510 AT3G60970.1 51.366 366 173 3 2 362 672 1037 1.20e-125 387
Msa0281510 AT3G60970.1 22.981 322 212 8 60 361 131 436 2.46e-14 75.1
Msa0281510 AT3G21250.5 51.913 366 172 2 1 362 1079 1444 1.32e-125 394
Msa0281510 AT3G59140.1 50.954 367 175 3 1 362 1076 1442 1.07e-123 389
Msa0281510 AT3G59140.1 27.149 221 146 3 141 360 617 823 5.59e-17 83.6
Msa0281510 AT3G13080.1 50.546 366 176 3 2 362 1139 1504 1.98e-123 389
Msa0281510 AT3G60160.3 50.820 366 175 3 2 362 1089 1454 4.69e-123 387
Msa0281510 AT3G60160.1 50.820 366 175 3 2 362 1125 1490 9.53e-123 387
Msa0281510 AT3G13090.1 50.000 366 178 3 2 362 1089 1454 1.99e-120 380
Msa0281510 AT3G13100.2 48.087 366 185 3 2 362 866 1231 6.16e-118 370
Msa0281510 AT3G13100.1 48.087 366 185 3 2 362 1111 1476 1.06e-116 370
Msa0281510 AT3G13080.5 49.855 345 169 2 2 342 1139 1483 1.95e-116 370
Msa0281510 AT1G04120.3 50.000 366 178 3 2 362 1103 1468 9.08e-115 365
Msa0281510 AT1G04120.3 25.080 311 202 8 65 360 514 808 2.90e-13 72.0
Msa0281510 AT1G04120.1 50.000 366 178 3 2 362 1138 1503 1.58e-114 364
Msa0281510 AT1G04120.1 24.675 308 201 8 68 360 552 843 6.82e-13 70.9
Msa0281510 AT1G04120.2 49.454 366 175 4 2 362 1138 1498 7.89e-111 354
Msa0281510 AT1G04120.2 24.675 308 201 8 68 360 552 843 6.63e-13 70.9
Msa0281510 AT3G13080.2 46.721 366 165 4 2 362 1139 1479 9.58e-106 340
Msa0281510 AT2G34660.3 42.547 369 203 4 2 361 821 1189 3.27e-86 285
Msa0281510 AT2G34660.3 23.920 301 208 7 66 361 266 550 1.45e-13 72.8
Msa0281510 AT2G34660.1 42.547 369 203 4 2 361 1108 1476 1.22e-85 284
Msa0281510 AT2G34660.1 23.920 301 208 7 66 361 553 837 1.14e-13 73.2
Msa0281510 AT2G34660.2 42.547 369 203 4 2 361 1108 1476 1.22e-85 284
Msa0281510 AT2G34660.2 23.920 301 208 7 66 361 553 837 1.14e-13 73.2
Msa0281510 AT1G30400.2 43.360 369 200 5 2 361 1103 1471 2.25e-85 283
Msa0281510 AT1G30400.2 23.810 294 199 8 77 361 560 837 3.73e-13 71.6
Msa0281510 AT1G30400.1 43.360 369 200 5 2 361 1103 1471 2.25e-85 283
Msa0281510 AT1G30400.1 23.810 294 199 8 77 361 560 837 3.73e-13 71.6
Msa0281510 AT1G30420.1 41.551 361 203 3 2 354 1101 1461 5.27e-83 276
Msa0281510 AT1G30420.1 24.161 298 211 6 66 361 554 838 6.14e-16 80.1
Msa0281510 AT1G30410.5 40.997 361 205 3 2 354 986 1346 5.56e-82 273
Msa0281510 AT1G30410.5 23.490 298 213 5 66 361 439 723 6.47e-14 73.9
Msa0281510 AT1G30410.2 40.997 361 205 3 2 354 1101 1461 8.34e-82 273
Msa0281510 AT1G30410.2 23.490 298 213 5 66 361 554 838 5.96e-14 73.9
Msa0281510 AT1G30410.6 40.997 361 205 3 2 354 1101 1461 8.34e-82 273
Msa0281510 AT1G30410.6 23.490 298 213 5 66 361 554 838 5.96e-14 73.9
Msa0281510 AT1G30410.4 40.997 361 205 3 2 354 1101 1461 8.34e-82 273
Msa0281510 AT1G30410.4 23.490 298 213 5 66 361 554 838 5.96e-14 73.9
Msa0281510 AT1G30410.1 40.997 361 205 3 2 354 1104 1464 9.04e-82 272
Msa0281510 AT1G30410.1 23.490 298 213 5 66 361 557 841 6.46e-14 73.9
Msa0281510 AT2G07680.6 42.258 310 167 5 59 361 1020 1324 7.69e-75 252
Msa0281510 AT2G07680.6 26.374 273 168 8 74 338 437 684 3.78e-14 74.7
Msa0281510 AT2G07680.1 42.258 310 167 5 59 361 1097 1401 8.17e-75 252
Msa0281510 AT2G07680.1 26.374 273 168 8 74 338 514 761 3.06e-14 75.1
Msa0281510 AT2G07680.4 42.258 310 167 5 59 361 1094 1398 8.39e-75 252
Msa0281510 AT2G07680.4 26.374 273 168 8 74 338 511 758 3.14e-14 75.1
Msa0281510 AT2G07680.5 42.258 310 167 5 59 361 1103 1407 8.47e-75 252
Msa0281510 AT2G07680.5 26.374 273 168 8 74 338 520 767 3.14e-14 75.1
Msa0281510 AT2G07680.3 42.258 310 167 5 59 361 1119 1423 8.53e-75 252
Msa0281510 AT2G07680.3 26.374 273 168 8 74 338 536 783 3.60e-14 74.7
Msa0281510 AT3G60160.2 46.862 239 123 2 2 236 1125 1363 6.29e-68 233
Msa0281510 AT1G30410.3 35.472 265 163 3 2 258 1101 1365 4.95e-49 178
Msa0281510 AT1G30410.3 23.490 298 213 5 66 361 554 838 4.76e-14 74.3
Msa0281510 AT4G28620.1 34.894 235 148 3 129 359 437 670 2.70e-39 148
Msa0281510 AT5G58270.1 35.319 235 147 3 129 359 477 710 2.71e-39 149
Msa0281510 AT4G28630.1 34.894 235 148 3 129 359 435 668 7.97e-39 147
Msa0281510 AT3G62150.3 29.700 367 233 10 2 350 268 627 1.87e-38 147
Msa0281510 AT3G62150.3 31.538 260 163 6 110 361 1037 1289 4.25e-34 134
Msa0281510 AT3G62150.2 29.700 367 233 10 2 350 268 627 1.87e-38 147
Msa0281510 AT3G62150.2 31.538 260 163 6 110 361 1037 1289 4.25e-34 134
Msa0281510 AT3G62150.1 29.700 367 233 10 2 350 268 627 1.87e-38 147
Msa0281510 AT3G62150.1 31.538 260 163 6 110 361 1037 1289 4.25e-34 134
Msa0281510 AT5G46540.1 34.855 241 148 5 128 360 1002 1241 1.69e-37 144
Msa0281510 AT5G46540.1 35.000 220 128 5 129 338 355 569 3.24e-35 137
Msa0281510 AT2G47000.4 36.957 230 136 5 129 351 382 609 6.16e-37 142
Msa0281510 AT2G47000.3 36.957 230 136 5 129 351 382 609 7.35e-37 142
Msa0281510 AT2G47000.7 36.957 230 136 5 129 351 382 609 7.35e-37 142
Msa0281510 AT2G47000.2 36.797 231 137 5 128 351 381 609 7.45e-37 142
Msa0281510 AT2G47000.2 39.496 119 64 4 128 239 1039 1156 3.17e-15 77.8
Msa0281510 AT2G47000.6 36.957 230 136 5 129 351 382 609 9.07e-37 142
Msa0281510 AT2G47000.6 33.195 241 152 5 129 361 1040 1279 1.92e-34 135
Msa0281510 AT2G47000.5 36.957 230 136 5 129 351 382 609 9.07e-37 142
Msa0281510 AT2G47000.5 33.195 241 152 5 129 361 1040 1279 1.92e-34 135
Msa0281510 AT2G47000.1 36.957 230 136 5 129 351 382 609 9.07e-37 142
Msa0281510 AT2G47000.1 33.195 241 152 5 129 361 1040 1279 1.92e-34 135
Msa0281510 AT1G28010.1 34.310 239 147 5 129 360 371 606 5.77e-36 140
Msa0281510 AT1G28010.1 30.252 238 151 5 129 356 1004 1236 1.77e-26 112
Msa0281510 AT3G28415.1 30.183 328 200 9 34 352 897 1204 5.84e-36 139
Msa0281510 AT3G28415.1 30.901 233 146 5 129 351 336 563 5.32e-28 116
Msa0281510 AT3G28415.2 30.183 328 200 9 34 352 905 1212 6.31e-36 139
Msa0281510 AT3G28415.2 30.901 233 146 5 129 351 344 571 5.14e-28 116
Msa0281510 AT4G18050.2 36.199 221 126 5 128 338 362 577 7.23e-36 139
Msa0281510 AT4G18050.2 34.025 241 150 5 128 360 1000 1239 4.91e-35 137
Msa0281510 AT4G18050.1 36.199 221 126 5 128 338 352 567 7.49e-36 139
Msa0281510 AT4G18050.1 34.025 241 150 5 128 360 990 1229 5.23e-35 137
Msa0281510 AT1G27940.2 30.000 280 185 6 88 360 116 391 2.47e-35 138
Msa0281510 AT1G27940.2 32.727 220 133 5 129 338 788 1002 5.05e-29 119
Msa0281510 AT1G27940.1 30.000 280 185 6 88 360 330 605 2.71e-35 137
Msa0281510 AT1G27940.1 32.727 220 133 5 129 338 1002 1216 7.32e-29 119
Msa0281510 AT1G02520.1 35.043 234 137 5 128 351 378 606 1.10e-34 136
Msa0281510 AT1G02520.1 33.607 244 149 6 129 361 1030 1271 6.17e-34 134
Msa0281510 AT1G02520.2 35.043 234 137 5 128 351 378 606 1.10e-34 136
Msa0281510 AT1G02520.2 33.607 244 149 6 129 361 1030 1271 6.17e-34 134
Msa0281510 AT1G02520.3 35.043 234 137 5 128 351 378 606 1.10e-34 136
Msa0281510 AT1G02520.3 33.607 244 149 6 129 361 1030 1271 6.17e-34 134
Msa0281510 AT1G02530.2 35.470 234 136 5 128 351 365 593 3.80e-34 134
Msa0281510 AT1G02530.1 35.470 234 136 5 128 351 365 593 4.07e-34 134
Msa0281510 AT1G02530.1 33.197 244 150 6 129 361 1025 1266 2.20e-33 132
Msa0281510 AT5G39040.1 32.937 252 158 6 118 361 384 632 5.65e-34 133
Msa0281510 AT4G01820.2 30.000 340 217 9 37 361 251 584 2.12e-33 132
Msa0281510 AT4G01820.1 30.000 340 217 9 37 361 251 584 2.37e-33 132
Msa0281510 AT4G01820.1 30.579 242 158 5 129 361 982 1222 4.42e-26 110
Msa0281510 AT2G36910.1 31.405 242 157 5 119 353 1012 1251 7.84e-33 130
Msa0281510 AT2G36910.1 31.405 242 155 6 129 361 366 605 3.18e-30 123
Msa0281510 AT3G28390.1 34.052 232 144 4 129 352 978 1208 8.10e-33 130
Msa0281510 AT3G28390.1 32.203 236 145 5 127 352 343 573 5.19e-31 125
Msa0281510 AT3G28860.1 31.557 244 152 5 128 361 362 600 1.23e-32 130
Msa0281510 AT3G28860.1 32.900 231 146 5 129 352 1008 1236 9.45e-30 121
Msa0281510 AT4G01830.1 35.593 236 137 5 128 353 350 580 1.63e-32 129
Msa0281510 AT4G01830.1 32.922 243 151 6 129 361 983 1223 5.52e-32 128
Msa0281510 AT4G01830.2 35.593 236 137 5 128 353 116 346 2.24e-32 129
Msa0281510 AT4G01830.2 32.922 243 151 6 129 361 749 989 6.47e-32 127
Msa0281510 AT5G03910.1 34.328 268 153 6 99 353 366 623 3.26e-32 128
Msa0281510 AT1G10680.1 33.937 221 131 5 128 338 979 1194 4.83e-32 128
Msa0281510 AT1G10680.1 31.674 221 136 5 128 338 358 573 4.55e-27 113
Msa0281510 AT4G25960.1 33.484 221 132 5 128 338 1027 1242 5.03e-32 128
Msa0281510 AT4G25960.1 32.759 232 141 5 129 350 399 625 1.26e-29 121
Msa0281510 AT3G28380.1 32.389 247 155 5 117 352 978 1223 6.43e-32 128
Msa0281510 AT3G28380.1 33.333 234 141 5 129 352 357 585 1.36e-30 124
Msa0281510 AT1G70610.2 30.526 285 177 9 92 361 234 512 7.32e-32 126
Msa0281510 AT3G28345.1 34.483 232 143 4 129 352 993 1223 1.12e-31 127
Msa0281510 AT3G28345.1 31.197 234 146 5 128 351 356 584 2.44e-28 117
Msa0281510 AT1G70610.1 31.557 244 153 6 129 361 453 693 2.06e-31 126
Msa0281510 AT3G28360.1 29.537 281 170 7 97 361 313 581 2.64e-31 126
Msa0281510 AT3G28360.1 33.475 236 140 5 129 352 979 1209 4.82e-31 125
Msa0281510 AT2G39480.2 31.818 264 162 7 109 361 958 1214 7.18e-28 115
Msa0281510 AT2G39480.2 29.289 239 163 3 128 361 229 466 1.22e-25 109
Msa0281510 AT2G39480.1 31.818 264 162 7 109 361 1138 1394 7.82e-28 115
Msa0281510 AT2G39480.1 29.289 239 163 3 128 361 409 646 1.31e-25 109
Msa0281510 AT4G25450.3 32.500 240 153 4 129 360 299 537 8.66e-28 114
Msa0281510 AT4G25450.1 32.500 240 153 4 129 360 468 706 1.15e-27 115
Msa0281510 AT1G10680.2 31.674 221 136 5 128 338 358 573 4.63e-27 113
Msa0281510 AT1G10680.2 33.511 188 110 5 128 305 979 1161 3.97e-24 104
Msa0281510 AT3G55320.1 30.597 268 160 7 115 361 1133 1395 6.23e-26 110
Msa0281510 AT3G55320.1 28.870 239 164 3 128 361 411 648 4.59e-25 107
Msa0281510 AT1G67940.1 33.193 238 129 7 127 349 25 247 2.80e-23 98.2
Msa0281510 AT1G30420.2 24.161 298 211 6 66 361 554 838 6.05e-16 80.1
Msa0281510 AT2G07680.2 26.374 273 168 8 74 338 536 783 2.76e-14 75.1
Msa0281510 AT5G39040.2 36.937 111 63 4 118 223 384 492 6.02e-13 70.5
Msa0281510 AT4G39850.2 25.449 334 199 15 36 336 335 651 2.19e-11 66.2
Msa0281510 AT4G39850.3 25.449 334 199 15 36 336 335 651 2.31e-11 66.2
Msa0281510 AT4G39850.1 25.449 334 199 15 36 336 335 651 2.39e-11 65.9
Msa0281510 AT4G39850.4 25.449 334 199 15 36 336 335 651 2.39e-11 65.9
Msa0281510 AT4G25450.2 32.895 152 93 4 129 272 468 618 2.52e-11 65.5
Msa0281510 AT3G47780.1 23.636 220 153 8 143 353 628 841 5.08e-11 64.7

Find 75 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATTCAGAAGAAGAAATT+TGG 0.223828 2_3:-16988339 Msa0281510:CDS
AATATTATCTTGCAACTTCT+AGG 0.239482 2_3:-16990286 Msa0281510:five_prime_UTR
AGTATCACAAGTGCTTATTT+TGG 0.244161 2_3:-16990342 None:intergenic
TATAGAGTTACATAATTTAC+AGG 0.283215 2_3:-16988983 Msa0281510:intron
CCTGAGAAACTTGACGCTTT+AGG 0.302300 2_3:-16987583 Msa0281510:intron
CAGCGACTGCTTCTTTCAAT+TGG 0.321580 2_3:+16987611 None:intergenic
TATGGATTGTGACAAGGTTT+TGG 0.337423 2_3:-16987171 Msa0281510:CDS
CATGATTTGAGGTCACGTTT+TGG 0.351877 2_3:-16988427 Msa0281510:CDS
ACGCAGCAAAATATTATTCA+TGG 0.355132 2_3:-16987306 Msa0281510:CDS
AAACACTCCTCTAGTTCTTA+AGG 0.360950 2_3:-16988605 Msa0281510:CDS
CAAGAGCCTGTCCTCTTTCA+AGG 0.369686 2_3:-16988394 Msa0281510:CDS
TTGCAATGTTGAGAACAAAA+TGG 0.391330 2_3:-16989103 Msa0281510:CDS
GTCGGTGTTGTTGGGCGTAC+AGG 0.410615 2_3:-16988550 Msa0281510:CDS
CTGATAAGTCTCCTCAGAAT+TGG 0.413138 2_3:-16989020 Msa0281510:CDS
GTTGGTATGTCTTTATCCTA+TGG 0.414885 2_3:-16989168 Msa0281510:CDS
GGTATTAACATTTCCAATGT+TGG 0.425910 2_3:-16988454 Msa0281510:CDS
TTAAGAACTAGAGGAGTGTT+TGG 0.427996 2_3:+16988607 None:intergenic
GATTGTCATAACACCAGAAA+TGG 0.428147 2_3:+16990205 None:intergenic
ATAACAATGGTGCAAATGAA+TGG 0.431276 2_3:-16990106 Msa0281510:CDS
CCTAAAGCGTCAAGTTTCTC+AGG 0.434097 2_3:+16987583 None:intergenic
AACATTGCAAGTCATAGATA+TGG 0.435062 2_3:+16989116 None:intergenic
GCAAAGGCAACTTCTATGCT+TGG 0.435390 2_3:-16987345 Msa0281510:CDS
ATGTTGGCCTTCATGATTTG+AGG 0.441905 2_3:-16988438 Msa0281510:CDS
AACACTCCTCTAGTTCTTAA+GGG 0.442016 2_3:-16988604 Msa0281510:CDS
AGCCATCACGTTTGCTTGAA+AGG 0.449934 2_3:-16986752 Msa0281510:CDS
AGAACCAACATTGATCCTCT+TGG 0.453025 2_3:-16988364 Msa0281510:CDS
TTTCTCAAGAAAATGTTGAC+AGG 0.457228 2_3:-16990157 Msa0281510:CDS
TTCTTACTGTTCCTTGAAAG+AGG 0.460892 2_3:+16988383 None:intergenic
GGAGTCTCTCTAACAATTGA+AGG 0.462071 2_3:-16988583 Msa0281510:CDS
CATTCTGCTTTCTTAAGCTA+CGG 0.472684 2_3:+16990183 None:intergenic
TCCATGGAGCTTCTGATGGA+AGG 0.474733 2_3:+16989049 None:intergenic
AGGTTGATTGAGCCTTCAGC+TGG 0.481120 2_3:-16988493 Msa0281510:CDS
TCACAGAATACCAACAGTTA+TGG 0.482627 2_3:-16987189 Msa0281510:CDS
CAAAGGCAACTTCTATGCTT+GGG 0.483685 2_3:-16987344 Msa0281510:CDS
TATGTCTTTATCCTATGGCC+TGG 0.485832 2_3:-16989163 Msa0281510:CDS
TGGTTGATGGTGGAGACAAT+TGG 0.497131 2_3:-16987376 Msa0281510:CDS
TGAAAGAGGACAGGCTCTTG+TGG 0.500310 2_3:+16988397 None:intergenic
CCAAGTGCTATTGCTAGGCC+AGG 0.500915 2_3:-16990014 Msa0281510:intron
AAATTATAGAACTATAGAAA+TGG 0.500956 2_3:+16986341 None:intergenic
GTTGTTGGGCGTACAGGAAG+TGG 0.507951 2_3:-16988544 Msa0281510:CDS
ACAAGAGACCACTCAGAGCC+AGG 0.509377 2_3:+16989145 None:intergenic
TCTGAAAAGTGATGAATCAC+TGG 0.509846 2_3:+16990230 None:intergenic
GGTGAATGCAAGTCTAAGAA+TGG 0.510835 2_3:-16990135 Msa0281510:CDS
ATATTATCTTGCAACTTCTA+GGG 0.517209 2_3:-16990285 Msa0281510:five_prime_UTR
ACAATTGGAGTGTGGGGCAA+AGG 0.520674 2_3:-16987361 Msa0281510:CDS
CAAATCATGAAGGCCAACAT+TGG 0.522227 2_3:+16988441 None:intergenic
TATAGTTCTATAATTTGAGT+AGG 0.525930 2_3:-16986334 Msa0281510:three_prime_UTR
ACTGTTCCTTGAAAGAGGAC+AGG 0.549782 2_3:+16988388 None:intergenic
ACCTTCCATCAGAAGCTCCA+TGG 0.549909 2_3:-16989050 Msa0281510:CDS
CCTCAGAATTGGCCTAGTCA+TGG 0.553789 2_3:-16989009 Msa0281510:CDS
GGTGGAGACAATTGGAGTGT+GGG 0.557164 2_3:-16987368 Msa0281510:CDS
GAGACTCCCTTAAGAACTAG+AGG 0.558523 2_3:+16988598 None:intergenic
TGGAGCTTCTGATGGAAGGT+TGG 0.561027 2_3:+16989053 None:intergenic
GGCAACTTCTATGCTTGGGA+AGG 0.567700 2_3:-16987340 Msa0281510:CDS
ACAAAATGGTTTCAGTTGAG+AGG 0.568673 2_3:-16989089 Msa0281510:CDS
CCTGGCCTAGCAATAGCACT+TGG 0.568947 2_3:+16990014 None:intergenic
TTCTCAAGAAAATGTTGACA+GGG 0.569446 2_3:-16990156 Msa0281510:CDS
TTCAGAAGAAGAAATTTGGA+AGG 0.577824 2_3:-16988335 Msa0281510:intron
GGTGTGAGCAGGTTAGGTAT+AGG 0.587423 2_3:-16988630 Msa0281510:intron
TAAAGAGTGTGGCAATGCAA+AGG 0.590382 2_3:+16990048 None:intergenic
TCCTATGGCCTGGCTCTGAG+TGG 0.594030 2_3:-16989153 Msa0281510:CDS
AATGGTGCAAATGAATGGCT+TGG 0.601063 2_3:-16990101 Msa0281510:CDS
ACCACTCAGAGCCAGGCCAT+AGG 0.605791 2_3:+16989152 None:intergenic
CAATCCAAGAGGATCAATGT+TGG 0.607496 2_3:+16988360 None:intergenic
AACAGTTATGGATTGTGACA+AGG 0.608358 2_3:-16987177 Msa0281510:CDS
TGCCTTTCAAGCAAACGTGA+TGG 0.609631 2_3:+16986750 None:intergenic
GTCTCTCTAACAATTGAAGG+TGG 0.611198 2_3:-16988580 Msa0281510:CDS
AACGTGACCTCAAATCATGA+AGG 0.615126 2_3:+16988431 None:intergenic
TGGTGGAGACAATTGGAGTG+TGG 0.617019 2_3:-16987369 Msa0281510:CDS
GTGGAGACAATTGGAGTGTG+GGG 0.625950 2_3:-16987367 Msa0281510:CDS
TTGTCACAATCCATAACTGT+TGG 0.638853 2_3:+16987179 None:intergenic
TCTTCTGAATACAATCCAAG+AGG 0.644316 2_3:+16988349 None:intergenic
AACTCTATAGTTCCATGACT+AGG 0.647558 2_3:+16988997 None:intergenic
CCATGACTAGGCCAATTCTG+AGG 0.662693 2_3:+16989009 None:intergenic
TGTTGCTGCAGAGTCTTGAG+CGG 0.685624 2_3:-16987636 Msa0281510:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAACTAAAAATAATTTA+TGG - chr2_3:16988452-16988471 Msa0281510:CDS 10.0%
!! ATAAATATATAGATTTAGAT+TGG - chr2_3:16989793-16989812 Msa0281510:intron 10.0%
!!! ATAGTTTTTTTTTTTTTGAA+AGG - chr2_3:16989958-16989977 Msa0281510:intron 10.0%
!! TAACCTAAAAAAAAAAAAAT+TGG + chr2_3:16990025-16990044 None:intergenic 10.0%
!!! TTATGCTATTATTTTTTTTT+AGG - chr2_3:16990042-16990061 Msa0281510:CDS 10.0%
!!! TGTTCTAGAAAATAATATTT+AGG - chr2_3:16987368-16987387 Msa0281510:CDS 15.0%
!! TTAAAATTGAAGATGAAATA+AGG - chr2_3:16988381-16988400 Msa0281510:CDS 15.0%
!! TAAAATTGAAGATGAAATAA+GGG - chr2_3:16988382-16988401 Msa0281510:CDS 15.0%
!! AGTGTATTAAAATAAAAGTT+CGG - chr2_3:16988493-16988512 Msa0281510:CDS 15.0%
!! ACATTAAAGTTATTAGATAT+GGG + chr2_3:16988965-16988984 None:intergenic 15.0%
!! AACATTAAAGTTATTAGATA+TGG + chr2_3:16988966-16988985 None:intergenic 15.0%
!!! AGTTTTTTATAGATAAATGT+TGG - chr2_3:16989107-16989126 Msa0281510:CDS 15.0%
!!! TTACTATATTATTTTGTTAG+TGG - chr2_3:16989232-16989251 Msa0281510:intron 15.0%
!!! TAGTGTTTTTGTAAATTTTT+TGG + chr2_3:16989737-16989756 None:intergenic 15.0%
!!! TTTTTTTTTTGAAAGGTTAA+TGG - chr2_3:16989965-16989984 Msa0281510:intron 15.0%
!!! ATTGAAAGATTTTTTTTTGA+GGG + chr2_3:16990156-16990175 None:intergenic 15.0%
!!! TATTGAAAGATTTTTTTTTG+AGG + chr2_3:16990157-16990176 None:intergenic 15.0%
!! AAATTATAGAACTATAGAAA+TGG + chr2_3:16990290-16990309 None:intergenic 15.0%
!! TTAAATGAAAAGATGATGAA+GGG + chr2_3:16986647-16986666 None:intergenic 20.0%
!!! GAACAATCACTATTTTAAAA+AGG - chr2_3:16986677-16986696 Msa0281510:intron 20.0%
!! TTGAATAAATGATCGAAATA+GGG + chr2_3:16986863-16986882 None:intergenic 20.0%
!! AAATACTCTTAAAAAATACG+TGG - chr2_3:16987228-16987247 Msa0281510:CDS 20.0%
!! AATACTCTTAAAAAATACGT+GGG - chr2_3:16987229-16987248 Msa0281510:CDS 20.0%
!!! GTTTTTGTAAAGAGTATTTT+AGG + chr2_3:16987339-16987358 None:intergenic 20.0%
!! TATAGAGTTACATAATTTAC+AGG - chr2_3:16987645-16987664 Msa0281510:intron 20.0%
!!! AGATTAGTCAATTTAATATG+CGG - chr2_3:16987683-16987702 Msa0281510:intron 20.0%
!!! TAATTTTGGTTTATTTATGC+AGG + chr2_3:16987722-16987741 None:intergenic 20.0%
!! AAAATTAGTGTATACCATTT+GGG - chr2_3:16987735-16987754 Msa0281510:intron 20.0%
!! TTGAAAAATAAAATGTGATG+TGG - chr2_3:16987851-16987870 Msa0281510:intron 20.0%
!! TCCATTAATAATTTCATCTA+GGG + chr2_3:16988819-16988838 None:intergenic 20.0%
!! ATCCATTAATAATTTCATCT+AGG + chr2_3:16988820-16988839 None:intergenic 20.0%
!! TTGTCAATAGTTAATATACT+AGG - chr2_3:16988855-16988874 Msa0281510:intron 20.0%
!! ATTGGTAGAATAATAAATTG+TGG - chr2_3:16989811-16989830 Msa0281510:intron 20.0%
!! TTGGTAGAATAATAAATTGT+GGG - chr2_3:16989812-16989831 Msa0281510:intron 20.0%
!!! GGTCCAATTTTTTTTTTTTT+AGG - chr2_3:16990019-16990038 Msa0281510:CDS 20.0%
!!! TATAGTTCTATAATTTGAGT+AGG - chr2_3:16990294-16990313 Msa0281510:five_prime_UTR 20.0%
! AATATTATCTTGCAACTTCT+AGG - chr2_3:16986342-16986361 Msa0281510:three_prime_UTR 25.0%
! ATATTATCTTGCAACTTCTA+GGG - chr2_3:16986343-16986362 Msa0281510:three_prime_UTR 25.0%
!!! AGAATGGATTTTCATAACAA+TGG - chr2_3:16986509-16986528 Msa0281510:intron 25.0%
! GTTAAATGAAAAGATGATGA+AGG + chr2_3:16986648-16986667 None:intergenic 25.0%
! TATCAAAAATCTTAACGTTG+TGG - chr2_3:16986804-16986823 Msa0281510:intron 25.0%
! CTTGAATAAATGATCGAAAT+AGG + chr2_3:16986864-16986883 None:intergenic 25.0%
! GATCATTTATTCAAGAACTA+AGG - chr2_3:16986869-16986888 Msa0281510:intron 25.0%
! AATAAGCTGAAAACAATGTA+CGG - chr2_3:16987037-16987056 Msa0281510:intron 25.0%
!! CATTATACTAGTTTACTAGA+AGG - chr2_3:16987145-16987164 Msa0281510:intron 25.0%
! AGCAAGTACTAACTAAAAAA+TGG - chr2_3:16987176-16987195 Msa0281510:CDS 25.0%
!!! AATTTGTTGAATACACTCTA+AGG - chr2_3:16987305-16987324 Msa0281510:CDS 25.0%
! ATACTCTTTACAAAAACTAG+CGG - chr2_3:16987342-16987361 Msa0281510:CDS 25.0%
! AAACCAAAATTATATCCAAG+TGG + chr2_3:16987430-16987449 None:intergenic 25.0%
!! CAAATGGTATACACTAATTT+TGG + chr2_3:16987736-16987755 None:intergenic 25.0%
! CAAAATTAGTGTATACCATT+TGG - chr2_3:16987734-16987753 Msa0281510:intron 25.0%
!! TTGAATATTTTGCATACTCT+TGG - chr2_3:16987785-16987804 Msa0281510:intron 25.0%
! AATAAAATGTGATGTGGATA+TGG - chr2_3:16987857-16987876 Msa0281510:intron 25.0%
! TCCATATATACTTTCTAACA+TGG - chr2_3:16987956-16987975 Msa0281510:intron 25.0%
!! TCCATGTTAGAAAGTATATA+TGG + chr2_3:16987960-16987979 None:intergenic 25.0%
!!! GGATACTTTTGGTTATTAAA+TGG - chr2_3:16987977-16987996 Msa0281510:intron 25.0%
! TGTATTCAGAAGAAGAAATT+TGG - chr2_3:16988289-16988308 Msa0281510:intron 25.0%
! TCAGTTACTGATAAATAGAA+AGG + chr2_3:16988695-16988714 None:intergenic 25.0%
! TCTATAGTAACCAATAAAGA+GGG - chr2_3:16988785-16988804 Msa0281510:intron 25.0%
! ACCCTAGATGAAATTATTAA+TGG - chr2_3:16988815-16988834 Msa0281510:intron 25.0%
! TAAAGTTATTAGATATGGGA+AGG + chr2_3:16988961-16988980 None:intergenic 25.0%
!!! AATGTTGGTGATTAATTTGT+CGG - chr2_3:16989122-16989141 Msa0281510:CDS 25.0%
! AATTCGAATATAGTCTATGA+AGG + chr2_3:16989197-16989216 None:intergenic 25.0%
!!! ATTATTTTGTTAGTGGTTGA+TGG - chr2_3:16989239-16989258 Msa0281510:intron 25.0%
! AAGTTTCTCATGAATACATA+TGG + chr2_3:16989514-16989533 None:intergenic 25.0%
! TGGTAGAATAATAAATTGTG+GGG - chr2_3:16989813-16989832 Msa0281510:intron 25.0%
! ATTCTAATAGATCAGCTTAA+TGG - chr2_3:16989930-16989949 Msa0281510:intron 25.0%
!!! TTATAGTTGTTTGCCTTTTT+TGG - chr2_3:16989991-16990010 Msa0281510:intron 25.0%
! ACAAGTTAAGGATTCAAAAA+AGG - chr2_3:16990073-16990092 Msa0281510:CDS 25.0%
TTTCTCAAGAAAATGTTGAC+AGG - chr2_3:16986471-16986490 Msa0281510:intron 30.0%
TTCTCAAGAAAATGTTGACA+GGG - chr2_3:16986472-16986491 Msa0281510:intron 30.0%
ATAACAATGGTGCAAATGAA+TGG - chr2_3:16986522-16986541 Msa0281510:intron 30.0%
CAAAAAGATCATAAAGAGTG+TGG + chr2_3:16986594-16986613 None:intergenic 30.0%
!! ATAAGTTGAGTTGTTTTCAC+AGG - chr2_3:16986993-16987012 Msa0281510:intron 30.0%
! AAAATACACCCAGTCTTTTT+AGG - chr2_3:16987255-16987274 Msa0281510:CDS 30.0%
TACTCTTTACAAAAACTAGC+GGG - chr2_3:16987343-16987362 Msa0281510:CDS 30.0%
! GTTCCACTTGGATATAATTT+TGG - chr2_3:16987424-16987443 Msa0281510:intron 30.0%
!!! TTTGGTTTTGCAGAATATGT+TGG - chr2_3:16987442-16987461 Msa0281510:intron 30.0%
AACATTGCAAGTCATAGATA+TGG + chr2_3:16987515-16987534 None:intergenic 30.0%
TTGCAATGTTGAGAACAAAA+TGG - chr2_3:16987525-16987544 Msa0281510:intron 30.0%
TACAATGTTTGTGTAACCTT+AGG - chr2_3:16987933-16987952 Msa0281510:intron 30.0%
! AGAAAGTATATATGGACCTA+AGG + chr2_3:16987952-16987971 None:intergenic 30.0%
! CTTTCTAACATGGATACTTT+TGG - chr2_3:16987966-16987985 Msa0281510:intron 30.0%
!! ATGATTATTTTTCCAGCTGA+AGG + chr2_3:16988150-16988169 None:intergenic 30.0%
GCTGGAAAAATAATCATTGA+TGG - chr2_3:16988153-16988172 Msa0281510:intron 30.0%
GGTATTAACATTTCCAATGT+TGG - chr2_3:16988174-16988193 Msa0281510:intron 30.0%
TTCAGAAGAAGAAATTTGGA+AGG - chr2_3:16988293-16988312 Msa0281510:intron 30.0%
TTACAGTATACCAAAATGCA+CGG - chr2_3:16988581-16988600 Msa0281510:CDS 30.0%
CTCTATAGTAACCAATAAAG+AGG - chr2_3:16988784-16988803 Msa0281510:intron 30.0%
TCAATCTGTCTTCAATGTAT+TGG + chr2_3:16988914-16988933 None:intergenic 30.0%
GAAGACAGATTGATTGAAAT+TGG - chr2_3:16988921-16988940 Msa0281510:intron 30.0%
ACAGATTGATTGAAATTGGA+GGG - chr2_3:16988925-16988944 Msa0281510:intron 30.0%
ACGCAGCAAAATATTATTCA+TGG - chr2_3:16989322-16989341 Msa0281510:intron 30.0%
! CACATATGTTAGTGTTTTGT+CGG - chr2_3:16989644-16989663 Msa0281510:intron 30.0%
TAATACACGATTAAGATCGA+AGG + chr2_3:16989687-16989706 None:intergenic 30.0%
TAGGTTATGCTAACAAGTTA+AGG - chr2_3:16990061-16990080 Msa0281510:CDS 30.0%
TCTGAAAAGTGATGAATCAC+TGG + chr2_3:16986401-16986420 None:intergenic 35.0%
GATTGTCATAACACCAGAAA+TGG + chr2_3:16986426-16986445 None:intergenic 35.0%
CATTCTGCTTTCTTAAGCTA+CGG + chr2_3:16986448-16986467 None:intergenic 35.0%
TCAAGAACTAAGGTTCTGTT+TGG - chr2_3:16986879-16986898 Msa0281510:intron 35.0%
AAGGTTCTGTTTGGATATAC+AGG - chr2_3:16986888-16986907 Msa0281510:intron 35.0%
! TACCAACATGAAGTACTTGT+GGG + chr2_3:16987102-16987121 None:intergenic 35.0%
AAATGGTTAAATTCACCCTG+AGG - chr2_3:16987193-16987212 Msa0281510:CDS 35.0%
GAGATACTCCTAAAAAGACT+GGG + chr2_3:16987266-16987285 None:intergenic 35.0%
AGAGATACTCCTAAAAAGAC+TGG + chr2_3:16987267-16987286 None:intergenic 35.0%
TGGAACAATTCTTTGTCAGT+AGG + chr2_3:16987410-16987429 None:intergenic 35.0%
TGACAAAGAATTGTTCCACT+TGG - chr2_3:16987412-16987431 Msa0281510:intron 35.0%
GTTGGTATGTCTTTATCCTA+TGG - chr2_3:16987460-16987479 Msa0281510:intron 35.0%
ACAAAATGGTTTCAGTTGAG+AGG - chr2_3:16987539-16987558 Msa0281510:intron 35.0%
! GACTTATCAGCAATTTTCCA+TGG + chr2_3:16987598-16987617 None:intergenic 35.0%
AACTCTATAGTTCCATGACT+AGG + chr2_3:16987634-16987653 None:intergenic 35.0%
! AACACGTTTCTTTTCCCAAA+TGG + chr2_3:16987752-16987771 None:intergenic 35.0%
ATTTGGGAAAAGAAACGTGT+TGG - chr2_3:16987751-16987770 Msa0281510:intron 35.0%
!! AAGAAACGTGTTGGTTACTT+AGG - chr2_3:16987760-16987779 Msa0281510:intron 35.0%
!! TTAAGAACTAGAGGAGTGTT+TGG + chr2_3:16988024-16988043 None:intergenic 35.0%
!! AAACACTCCTCTAGTTCTTA+AGG - chr2_3:16988023-16988042 Msa0281510:intron 35.0%
!! AACACTCCTCTAGTTCTTAA+GGG - chr2_3:16988024-16988043 Msa0281510:intron 35.0%
ATTGAAGGTGGAGAAAAAGT+CGG - chr2_3:16988060-16988079 Msa0281510:intron 35.0%
CAATCAACCTAAACAACACT+TGG + chr2_3:16988125-16988144 None:intergenic 35.0%
TTCTTACTGTTCCTTGAAAG+AGG + chr2_3:16988248-16988267 None:intergenic 35.0%
TCTTCTGAATACAATCCAAG+AGG + chr2_3:16988282-16988301 None:intergenic 35.0%
GACAGATTGATTGAAATTGG+AGG - chr2_3:16988924-16988943 Msa0281510:intron 35.0%
!!! ATTTTGTTAGTGGTTGATGG+TGG - chr2_3:16989242-16989261 Msa0281510:intron 35.0%
TCACAGAATACCAACAGTTA+TGG - chr2_3:16989439-16989458 Msa0281510:intron 35.0%
TTGTCACAATCCATAACTGT+TGG + chr2_3:16989452-16989471 None:intergenic 35.0%
! AACAGTTATGGATTGTGACA+AGG - chr2_3:16989451-16989470 Msa0281510:intron 35.0%
!! TATGGATTGTGACAAGGTTT+TGG - chr2_3:16989457-16989476 Msa0281510:intron 35.0%
!! AAGGTTTTGGTCATAGATGA+AGG - chr2_3:16989470-16989489 Msa0281510:intron 35.0%
GATTAAGATCGAAGGATGTA+TGG + chr2_3:16989679-16989698 None:intergenic 35.0%
!! TGTGGGGTATTTGATGTTTT+TGG - chr2_3:16989829-16989848 Msa0281510:intron 35.0%
!!! ACTTTTTGCAGCATTGGTTA+AGG - chr2_3:16989904-16989923 Msa0281510:intron 35.0%
!!! TAGTTGTTTGCCTTTTTTGG+TGG - chr2_3:16989994-16990013 Msa0281510:intron 35.0%
TTTCTTATCATGTGCCCTTA+AGG - chr2_3:16990218-16990237 Msa0281510:five_prime_UTR 35.0%
AATGCTAACAAGTGCCTTAA+GGG + chr2_3:16990235-16990254 None:intergenic 35.0%
AAATGCTAACAAGTGCCTTA+AGG + chr2_3:16990236-16990255 None:intergenic 35.0%
! CACTTTTCAGAGACCATTTC+TGG - chr2_3:16986410-16986429 Msa0281510:intron 40.0%
GGTGAATGCAAGTCTAAGAA+TGG - chr2_3:16986493-16986512 Msa0281510:intron 40.0%
AATGGTGCAAATGAATGGCT+TGG - chr2_3:16986527-16986546 Msa0281510:intron 40.0%
! TGGTTTTCGCTTGGACTATA+TGG - chr2_3:16986547-16986566 Msa0281510:intron 40.0%
! GGTTTTCGCTTGGACTATAT+GGG - chr2_3:16986548-16986567 Msa0281510:intron 40.0%
! TAAAGAGTGTGGCAATGCAA+AGG + chr2_3:16986583-16986602 None:intergenic 40.0%
!! TTTTGCCAAGTGCTATTGCT+AGG - chr2_3:16986609-16986628 Msa0281510:intron 40.0%
ATGATGAAGGGAGTTATACC+TGG + chr2_3:16986635-16986654 None:intergenic 40.0%
TTAAAACCCTGTCACAGCAA+AGG - chr2_3:16986702-16986721 Msa0281510:intron 40.0%
TGACTGTGTTTCGCAACAAA+AGG + chr2_3:16986741-16986760 None:intergenic 40.0%
TTGCGAAACACAGTCAAATG+CGG - chr2_3:16986745-16986764 Msa0281510:CDS 40.0%
GGACTGTTTGGAAGAGTTTA+CGG + chr2_3:16987081-16987100 None:intergenic 40.0%
! CTACCAACATGAAGTACTTG+TGG + chr2_3:16987103-16987122 None:intergenic 40.0%
! TTTTAGCAAGATGCACCTCA+GGG + chr2_3:16987211-16987230 None:intergenic 40.0%
!! ATTTTAGCAAGATGCACCTC+AGG + chr2_3:16987212-16987231 None:intergenic 40.0%
TATGTCTTTATCCTATGGCC+TGG - chr2_3:16987465-16987484 Msa0281510:intron 40.0%
! ATTTTCCATGGAGCTTCTGA+TGG + chr2_3:16987586-16987605 None:intergenic 40.0%
CTGATAAGTCTCCTCAGAAT+TGG - chr2_3:16987608-16987627 Msa0281510:CDS 40.0%
GGTTATTAAATGGTGTGAGC+AGG - chr2_3:16987987-16988006 Msa0281510:intron 40.0%
TTAAATGGTGTGAGCAGGTT+AGG - chr2_3:16987992-16988011 Msa0281510:intron 40.0%
GGAGTCTCTCTAACAATTGA+AGG - chr2_3:16988045-16988064 Msa0281510:intron 40.0%
GTCTCTCTAACAATTGAAGG+TGG - chr2_3:16988048-16988067 Msa0281510:intron 40.0%
!! GAGAAAAAGTCGGTGTTGTT+GGG - chr2_3:16988070-16988089 Msa0281510:intron 40.0%
!! CACTCATCCAAGTGTTGTTT+AGG - chr2_3:16988115-16988134 Msa0281510:intron 40.0%
CAAATCATGAAGGCCAACAT+TGG + chr2_3:16988190-16988209 None:intergenic 40.0%
!! ATGTTGGCCTTCATGATTTG+AGG - chr2_3:16988190-16988209 Msa0281510:intron 40.0%
AACGTGACCTCAAATCATGA+AGG + chr2_3:16988200-16988219 None:intergenic 40.0%
!! CATGATTTGAGGTCACGTTT+TGG - chr2_3:16988201-16988220 Msa0281510:intron 40.0%
AGAACCAACATTGATCCTCT+TGG - chr2_3:16988264-16988283 Msa0281510:intron 40.0%
CAATCCAAGAGGATCAATGT+TGG + chr2_3:16988271-16988290 None:intergenic 40.0%
!!! GGTTTTGTTGCCCTCTTTAT+TGG + chr2_3:16988798-16988817 None:intergenic 40.0%
AGTAGTCCAGTGATATGTGT+CGG + chr2_3:16989174-16989193 None:intergenic 40.0%
CAAAGGCAACTTCTATGCTT+GGG - chr2_3:16989284-16989303 Msa0281510:intron 40.0%
ATGAACCGCAAACACATACA+CGG - chr2_3:16989551-16989570 Msa0281510:intron 40.0%
!!! GGGTATTTGATGTTTTTGGC+AGG - chr2_3:16989833-16989852 Msa0281510:intron 40.0%
!!! GTTTTTGGCAGGATTTGCAA+AGG - chr2_3:16989844-16989863 Msa0281510:intron 40.0%
!!! GCATTCACTTTTTGCAGCAT+TGG - chr2_3:16989898-16989917 Msa0281510:intron 40.0%
!!! TGTTTGCCTTTTTTGGTGGT+AGG - chr2_3:16989998-16990017 Msa0281510:intron 40.0%
ATTGGACCTACCACCAAAAA+AGG + chr2_3:16990007-16990026 None:intergenic 40.0%
!!! TGAATGGCTTGGTTTTCGCT+TGG - chr2_3:16986538-16986557 Msa0281510:intron 45.0%
! GAAGTACTTGTGGGACTGTT+TGG + chr2_3:16987093-16987112 None:intergenic 45.0%
GTCCCACAAGTACTTCATGT+TGG - chr2_3:16987097-16987116 Msa0281510:intron 45.0%
GAGACTCCCTTAAGAACTAG+AGG + chr2_3:16988033-16988052 None:intergenic 45.0%
!! GGAGAAAAAGTCGGTGTTGT+TGG - chr2_3:16988069-16988088 Msa0281510:intron 45.0%
ACTGTTCCTTGAAAGAGGAC+AGG + chr2_3:16988243-16988262 None:intergenic 45.0%
CAGTATACCAAAATGCACGG+AGG - chr2_3:16988584-16988603 Msa0281510:CDS 45.0%
ACCAAAATGCACGGAGGTTT+CGG - chr2_3:16988590-16988609 Msa0281510:CDS 45.0%
GCTAAGTCCAAAGGCTTGTA+GGG + chr2_3:16988638-16988657 None:intergenic 45.0%
CAGCGACTGCTTCTTTCAAT+TGG + chr2_3:16989020-16989039 None:intergenic 45.0%
! CCTAAAGCGTCAAGTTTCTC+AGG + chr2_3:16989048-16989067 None:intergenic 45.0%
CCTGAGAAACTTGACGCTTT+AGG - chr2_3:16989045-16989064 Msa0281510:CDS 45.0%
GTAGTCCAGTGATATGTGTC+GGG + chr2_3:16989173-16989192 None:intergenic 45.0%
!! TGGTTGATGGTGGAGACAAT+TGG - chr2_3:16989252-16989271 Msa0281510:intron 45.0%
GCAAAGGCAACTTCTATGCT+TGG - chr2_3:16989283-16989302 Msa0281510:intron 45.0%
TACATATCAGTGTGAGCGTC+TGG + chr2_3:16989580-16989599 None:intergenic 45.0%
AGCCATCACGTTTGCTTGAA+AGG - chr2_3:16989876-16989895 Msa0281510:intron 45.0%
TGCCTTTCAAGCAAACGTGA+TGG + chr2_3:16989881-16989900 None:intergenic 45.0%
! CAGTGACCTTTGCTGTGACA+GGG + chr2_3:16986711-16986730 None:intergenic 50.0%
! ACAGTGACCTTTGCTGTGAC+AGG + chr2_3:16986712-16986731 None:intergenic 50.0%
TGGAGCTTCTGATGGAAGGT+TGG + chr2_3:16987578-16987597 None:intergenic 50.0%
ACCTTCCATCAGAAGCTCCA+TGG - chr2_3:16987578-16987597 Msa0281510:intron 50.0%
TCCATGGAGCTTCTGATGGA+AGG + chr2_3:16987582-16987601 None:intergenic 50.0%
CCATGACTAGGCCAATTCTG+AGG + chr2_3:16987622-16987641 None:intergenic 50.0%
! CCTCAGAATTGGCCTAGTCA+TGG - chr2_3:16987619-16987638 Msa0281510:CDS 50.0%
GGTGTGAGCAGGTTAGGTAT+AGG - chr2_3:16987998-16988017 Msa0281510:intron 50.0%
! AGGTTGATTGAGCCTTCAGC+TGG - chr2_3:16988135-16988154 Msa0281510:intron 50.0%
TGAAAGAGGACAGGCTCTTG+TGG + chr2_3:16988234-16988253 None:intergenic 50.0%
CAAGAGCCTGTCCTCTTTCA+AGG - chr2_3:16988234-16988253 Msa0281510:intron 50.0%
! CTCCAGCAGTCTGAGACTAT+TGG + chr2_3:16988519-16988538 None:intergenic 50.0%
!! AGGCTTGTAGGGTTGGTACA+CGG + chr2_3:16988627-16988646 None:intergenic 50.0%
GTACCAACCCTACAAGCCTT+TGG - chr2_3:16988628-16988647 Msa0281510:intron 50.0%
AGTCCAAAGGCTTGTAGGGT+TGG + chr2_3:16988634-16988653 None:intergenic 50.0%
GGCTAAGTCCAAAGGCTTGT+AGG + chr2_3:16988639-16988658 None:intergenic 50.0%
AGCCTTTGGACTTAGCCCAA+TGG - chr2_3:16988642-16988661 Msa0281510:intron 50.0%
GCCTTTGGACTTAGCCCAAT+GGG - chr2_3:16988643-16988662 Msa0281510:intron 50.0%
TCCCATTGGGCTAAGTCCAA+AGG + chr2_3:16988647-16988666 None:intergenic 50.0%
TTTGGACTTAGCCCAATGGG+AGG - chr2_3:16988646-16988665 Msa0281510:intron 50.0%
AGCGAGATAGACCTCCCATT+GGG + chr2_3:16988660-16988679 None:intergenic 50.0%
AAGCGAGATAGACCTCCCAT+TGG + chr2_3:16988661-16988680 None:intergenic 50.0%
TGCACAATCCCCTCACTGTA+GGG + chr2_3:16988890-16988909 None:intergenic 50.0%
TTGCACAATCCCCTCACTGT+AGG + chr2_3:16988891-16988910 None:intergenic 50.0%
TGTTGCTGCAGAGTCTTGAG+CGG - chr2_3:16988992-16989011 Msa0281510:CDS 50.0%
TGGTGGAGACAATTGGAGTG+TGG - chr2_3:16989259-16989278 Msa0281510:intron 50.0%
GGTGGAGACAATTGGAGTGT+GGG - chr2_3:16989260-16989279 Msa0281510:intron 50.0%
GTGGAGACAATTGGAGTGTG+GGG - chr2_3:16989261-16989280 Msa0281510:intron 50.0%
ACAATTGGAGTGTGGGGCAA+AGG - chr2_3:16989267-16989286 Msa0281510:intron 50.0%
GGCAACTTCTATGCTTGGGA+AGG - chr2_3:16989288-16989307 Msa0281510:intron 50.0%
GGTGTCCGTGTATGTGTTTG+CGG + chr2_3:16989559-16989578 None:intergenic 50.0%
CCTGGCCTAGCAATAGCACT+TGG + chr2_3:16986617-16986636 None:intergenic 55.0%
! CCAAGTGCTATTGCTAGGCC+AGG - chr2_3:16986614-16986633 Msa0281510:exon 55.0%
CACAGCAAAGGTCACTGTCG+TGG - chr2_3:16986714-16986733 Msa0281510:intron 55.0%
TGTGACTGCAGTCGCGATCA+AGG + chr2_3:16986780-16986799 None:intergenic 55.0%
ACAAGAGACCACTCAGAGCC+AGG + chr2_3:16987486-16987505 None:intergenic 55.0%
GTTGTTGGGCGTACAGGAAG+TGG - chr2_3:16988084-16988103 Msa0281510:intron 55.0%
GGCCAATAGTCTCAGACTGC+TGG - chr2_3:16988514-16988533 Msa0281510:intron 55.0%
AGTCTCAGACTGCTGGAGAG+AGG - chr2_3:16988521-16988540 Msa0281510:intron 55.0%
! GCCGAAACCTCCGTGCATTT+TGG + chr2_3:16988594-16988613 None:intergenic 55.0%
!! GGCTTGTAGGGTTGGTACAC+GGG + chr2_3:16988626-16988645 None:intergenic 55.0%
ACCCAGAGTCCCTACAGTGA+GGG - chr2_3:16988878-16988897 Msa0281510:intron 55.0%
AGCGTCCCGACACATATCAC+TGG - chr2_3:16989165-16989184 Msa0281510:CDS 55.0%
!! TCCTATGGCCTGGCTCTGAG+TGG - chr2_3:16987475-16987494 Msa0281510:intron 60.0%
ACCACTCAGAGCCAGGCCAT+AGG + chr2_3:16987479-16987498 None:intergenic 60.0%
!! GTCGGTGTTGTTGGGCGTAC+AGG - chr2_3:16988078-16988097 Msa0281510:intron 60.0%
GTTGGTACACGGGTGTGTGG+GGG + chr2_3:16988616-16988635 None:intergenic 60.0%
! GGTTGGTACACGGGTGTGTG+GGG + chr2_3:16988617-16988636 None:intergenic 60.0%
!! GGGTTGGTACACGGGTGTGT+GGG + chr2_3:16988618-16988637 None:intergenic 60.0%
!! AGGGTTGGTACACGGGTGTG+TGG + chr2_3:16988619-16988638 None:intergenic 60.0%
GACCCAGAGTCCCTACAGTG+AGG - chr2_3:16988877-16988896 Msa0281510:intron 60.0%
CCCCTCACTGTAGGGACTCT+GGG + chr2_3:16988882-16988901 None:intergenic 60.0%
CCCAGAGTCCCTACAGTGAG+GGG - chr2_3:16988879-16988898 Msa0281510:intron 60.0%
TCCCCTCACTGTAGGGACTC+TGG + chr2_3:16988883-16988902 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 16986299 16990351 16986299 ID=Msa0281510;Name=Msa0281510
chr2_3 mRNA 16986299 16990351 16986299 ID=Msa0281510-mRNA-1;Parent=Msa0281510;Name=Msa0281510-mRNA-1;_AED=0.03;_eAED=0.03;_QI=138|0.75|0.66|1|0.75|0.66|9|101|374
chr2_3 exon 16986299 16986378 16986299 ID=Msa0281510-mRNA-1:exon:7052;Parent=Msa0281510-mRNA-1
chr2_3 exon 16986610 16986670 16986610 ID=Msa0281510-mRNA-1:exon:7051;Parent=Msa0281510-mRNA-1
chr2_3 exon 16986723 16986795 16986723 ID=Msa0281510-mRNA-1:exon:7050;Parent=Msa0281510-mRNA-1
chr2_3 exon 16987159 16987398 16987159 ID=Msa0281510-mRNA-1:exon:7049;Parent=Msa0281510-mRNA-1
chr2_3 exon 16987584 16987647 16987584 ID=Msa0281510-mRNA-1:exon:7048;Parent=Msa0281510-mRNA-1
chr2_3 exon 16988336 16988513 16988336 ID=Msa0281510-mRNA-1:exon:7047;Parent=Msa0281510-mRNA-1
chr2_3 exon 16988523 16988641 16988523 ID=Msa0281510-mRNA-1:exon:7046;Parent=Msa0281510-mRNA-1
chr2_3 exon 16988984 16989195 16988984 ID=Msa0281510-mRNA-1:exon:7045;Parent=Msa0281510-mRNA-1
chr2_3 exon 16990015 16990351 16990015 ID=Msa0281510-mRNA-1:exon:7044;Parent=Msa0281510-mRNA-1
chr2_3 five_prime_UTR 16990214 16990351 16990214 ID=Msa0281510-mRNA-1:five_prime_utr;Parent=Msa0281510-mRNA-1
chr2_3 CDS 16990015 16990213 16990015 ID=Msa0281510-mRNA-1:cds;Parent=Msa0281510-mRNA-1
chr2_3 CDS 16988984 16989195 16988984 ID=Msa0281510-mRNA-1:cds;Parent=Msa0281510-mRNA-1
chr2_3 CDS 16988523 16988641 16988523 ID=Msa0281510-mRNA-1:cds;Parent=Msa0281510-mRNA-1
chr2_3 CDS 16988336 16988513 16988336 ID=Msa0281510-mRNA-1:cds;Parent=Msa0281510-mRNA-1
chr2_3 CDS 16987584 16987647 16987584 ID=Msa0281510-mRNA-1:cds;Parent=Msa0281510-mRNA-1
chr2_3 CDS 16987159 16987398 16987159 ID=Msa0281510-mRNA-1:cds;Parent=Msa0281510-mRNA-1
chr2_3 CDS 16986723 16986795 16986723 ID=Msa0281510-mRNA-1:cds;Parent=Msa0281510-mRNA-1
chr2_3 CDS 16986631 16986670 16986631 ID=Msa0281510-mRNA-1:cds;Parent=Msa0281510-mRNA-1
chr2_3 three_prime_UTR 16986610 16986630 16986610 ID=Msa0281510-mRNA-1:three_prime_utr;Parent=Msa0281510-mRNA-1
chr2_3 three_prime_UTR 16986299 16986378 16986299 ID=Msa0281510-mRNA-1:three_prime_utr;Parent=Msa0281510-mRNA-1
Gene Sequence

>Msa0281510

ATGACAATCCGTAGCTTAAGAAAGCAGAATGCATTTTCTCAAGAAAATGTTGACAGGGTGAATGCAAGTCTAAGAATGGATTTTCATAACAATGGTGCAAATGAATGGCTTGGTTTTCGCTTGGACTATATGGGAGTGACTTTCCTTTGCATTGCCACACTCTTTATGATCTTTTTGCCAAGTGCTATTGCTAGGCCAGAATATGTTGGTATGTCTTTATCCTATGGCCTGGCTCTGAGTGGTCTCTTGTCGATTACCATATCTATGACTTGCAATGTTGAGAACAAAATGGTTTCAGTTGAGAGGATAAAGCAGTTTACCAACCTTCCATCAGAAGCTCCATGGAAAATTGCTGATAAGTCTCCTCAGAATTGGCCTAGTCATGGAACTATAGAGTTACATAATTTACAGGTTAGGTATAGGCCAAACACTCCTCTAGTTCTTAAGGGAGTCTCTCTAACAATTGAAGGTGGAGAAAAAGTCGGTGTTGTTGGGCGTACAGGAAGTGGAAAATCAACACTCATCCAAGTGTTGATTGAGCCTTCAGCTGGAAAAATAATCATTGATGGTATTAACATTTCCAATGTTGGCCTTCATGATTTGAGGTCACGTTTTGGAATTATTCCACAAGAGCCTGTCCTCTTTCAAGGAACAGTAAGAACCAACATTGATCCTCTTGGATTGTATTCAGAAGAAGAAATTTGGAAGAGTCTTGAGCGGTGCCAATTGAAAGAAGCAGTCGCTGCAAAGCCTGAGAAACTTGACGCTTTAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGGCAACTTCTATGCTTGGGAAGGATCATGCTAAAACGCAGCAAAATATTATTCATGGATGAAGCAACAGCATCAGTTGATTCGCAAACAGATGTTGTATTACAGAAGATCATCAGAGAAGACTTTGCAGATCGTACAATCGTTAGCATTGCTCACAGAATACCAACAGTTATGGATTGTGACAAGGTTTTGGTCATAGATGAAGGATTTGCAAAGGAATATGACAAGCCATCACGTTTGCTTGAAAGGCATTCACTTTTTGCAGCATTGGTTAAGGAGTTAATGGTAGTTATAGTTGTTTGCCTTTTTTGGTGGTAG

Protein sequence

>Msa0281510

MTIRSLRKQNAFSQENVDRVNASLRMDFHNNGANEWLGFRLDYMGVTFLCIATLFMIFLPSAIARPEYVGMSLSYGLALSGLLSITISMTCNVENKMVSVERIKQFTNLPSEAPWKIADKSPQNWPSHGTIELHNLQVRYRPNTPLVLKGVSLTIEGGEKVGVVGRTGSGKSTLIQVLIEPSAGKIIIDGINISNVGLHDLRSRFGIIPQEPVLFQGTVRTNIDPLGLYSEEEIWKSLERCQLKEAVAAKPEKLDALVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDVVLQKIIREDFADRTIVSIAHRIPTVMDCDKVLVIDEGFAKEYDKPSRLLERHSLFAALVKELMVVIVVCLFWW*