AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0283860


Find 449 sgRNAs with CRISPR-Local

Find 801 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr2_3 gene 21522573 21533578 21522573 ID=Msa0283860;Name=Msa0283860
chr2_3 mRNA 21522573 21533578 21522573 ID=Msa0283860-mRNA-1;Parent=Msa0283860;Name=Msa0283860-mRNA-1;_AED=0.07;_eAED=0.07;_QI=479|0.95|0.95|1|1|1|23|364|1424
chr2_3 exon 21522573 21523597 21522573 ID=Msa0283860-mRNA-1:exon:8412;Parent=Msa0283860-mRNA-1
chr2_3 exon 21524082 21524325 21524082 ID=Msa0283860-mRNA-1:exon:8411;Parent=Msa0283860-mRNA-1
chr2_3 exon 21524592 21524981 21524592 ID=Msa0283860-mRNA-1:exon:8410;Parent=Msa0283860-mRNA-1
chr2_3 exon 21525080 21525379 21525080 ID=Msa0283860-mRNA-1:exon:8409;Parent=Msa0283860-mRNA-1
chr2_3 exon 21525466 21525837 21525466 ID=Msa0283860-mRNA-1:exon:8408;Parent=Msa0283860-mRNA-1
chr2_3 exon 21526034 21526141 21526034 ID=Msa0283860-mRNA-1:exon:8407;Parent=Msa0283860-mRNA-1
chr2_3 exon 21526241 21526351 21526241 ID=Msa0283860-mRNA-1:exon:8406;Parent=Msa0283860-mRNA-1
chr2_3 exon 21526437 21526508 21526437 ID=Msa0283860-mRNA-1:exon:8405;Parent=Msa0283860-mRNA-1
chr2_3 exon 21526613 21526819 21526613 ID=Msa0283860-mRNA-1:exon:8404;Parent=Msa0283860-mRNA-1
chr2_3 exon 21527158 21527286 21527158 ID=Msa0283860-mRNA-1:exon:8403;Parent=Msa0283860-mRNA-1
chr2_3 exon 21527638 21527715 21527638 ID=Msa0283860-mRNA-1:exon:8402;Parent=Msa0283860-mRNA-1
chr2_3 exon 21528135 21528275 21528135 ID=Msa0283860-mRNA-1:exon:8401;Parent=Msa0283860-mRNA-1
chr2_3 exon 21528370 21528492 21528370 ID=Msa0283860-mRNA-1:exon:8400;Parent=Msa0283860-mRNA-1
chr2_3 exon 21528604 21528702 21528604 ID=Msa0283860-mRNA-1:exon:8399;Parent=Msa0283860-mRNA-1
chr2_3 exon 21529515 21529559 21529515 ID=Msa0283860-mRNA-1:exon:8398;Parent=Msa0283860-mRNA-1
chr2_3 exon 21529653 21529865 21529653 ID=Msa0283860-mRNA-1:exon:8397;Parent=Msa0283860-mRNA-1
chr2_3 exon 21530152 21530286 21530152 ID=Msa0283860-mRNA-1:exon:8396;Parent=Msa0283860-mRNA-1
chr2_3 exon 21530379 21530567 21530379 ID=Msa0283860-mRNA-1:exon:8395;Parent=Msa0283860-mRNA-1
chr2_3 exon 21531270 21531404 21531270 ID=Msa0283860-mRNA-1:exon:8394;Parent=Msa0283860-mRNA-1
chr2_3 exon 21531499 21531747 21531499 ID=Msa0283860-mRNA-1:exon:8393;Parent=Msa0283860-mRNA-1
chr2_3 exon 21532088 21532168 21532088 ID=Msa0283860-mRNA-1:exon:8392;Parent=Msa0283860-mRNA-1
chr2_3 exon 21532250 21532372 21532250 ID=Msa0283860-mRNA-1:exon:8391;Parent=Msa0283860-mRNA-1
chr2_3 exon 21533030 21533578 21533030 ID=Msa0283860-mRNA-1:exon:8390;Parent=Msa0283860-mRNA-1
chr2_3 five_prime_UTR 21533100 21533578 21533100 ID=Msa0283860-mRNA-1:five_prime_utr;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21533030 21533099 21533030 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21532250 21532372 21532250 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21532088 21532168 21532088 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21531499 21531747 21531499 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21531270 21531404 21531270 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21530379 21530567 21530379 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21530152 21530286 21530152 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21529653 21529865 21529653 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21529515 21529559 21529515 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21528604 21528702 21528604 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21528370 21528492 21528370 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21528135 21528275 21528135 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21527638 21527715 21527638 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21527158 21527286 21527158 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21526613 21526819 21526613 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21526437 21526508 21526437 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21526241 21526351 21526241 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21526034 21526141 21526034 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21525466 21525837 21525466 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21525080 21525379 21525080 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21524592 21524981 21524592 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21524082 21524325 21524082 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 CDS 21522937 21523597 21522937 ID=Msa0283860-mRNA-1:cds;Parent=Msa0283860-mRNA-1
chr2_3 three_prime_UTR 21522573 21522936 21522573 ID=Msa0283860-mRNA-1:three_prime_utr;Parent=Msa0283860-mRNA-1
Gene Sequence

>Msa0283860

ATGAGGGTGGTTTTGCCATTGATTCTGATTTGTGTTTTTGGTTTTGTTGTTGAAGCTCAAGGATCTGAAGGGACTATTATATCCCCATCACCGGCATTTCTTCCTGGTGTTCATCCTGAAGGAGAAGCACCTGGTCCTATCCATAATGGACAGTCATGGAGAAGCACTGCATCAAGCCCTTCAGATCCAGATGGATCTGTTATATCGCCGTCTCCAGCAACATTACCTATGGATCCTTCCTCTGGTGAAGCACCTAGTCTTTTACATCCGAATGGGACTTTATTGCAACCTCCAGTTGCATTGCCACCTTCTATATCAGCTCCACCTCCTCAAAAGATTAAGGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAGCACAAGATCGATATCGTTGCCAAATAATTCTGTTCCGGCACCATCAACTGCTGAAAGAAATTTGCCACCATCCATGCAACCAATTCCACCTCTAATTAAGACACCTACTGTTAGTCCTCCTATATCGACACCAACTGCTCCAGCTCCTGTTGCAACACCTACTGGAAATTTGCCTAAAACTTCACCTGTCAGTCAACCGATTAAGCGTGGAAGTTTGCCTCCGAACGTTGATAACAGGAATGAAAGTAAGAGTCACAACCCAGAGCCAATTTCACCAGGGTCTTTCTTGCACCCTTCACTTGCATCACCACCTCCTAGTCCAAGTGCCAAATCATTATCGCCACCATATAAGGCTGTTCCAGCACCATCAACTGCTGAAAGAAACTTTCCCCCACCCATGCAGCCAATTCCACCTCAAAGGGAAGCACCTATTGTTAGGCCTCCTATATCCGCACCGATTGCTCAAGCCCCTGTTGCAATACCTCCTGCAAATTTGCCTAAAACATCACCTATCAGCCAACCAATTGATCATGGAAGTTTGCCTCCTAATGTTGATAAGAGGAATGAAAGCAACAGTCACAACCTAGAGCCAGTTTCACCAGGATCTTTCTTGCATCCTCCAGTTGCATTACAACCTCCTACATCAGCTCCACCTCCTCAGAAGACTAAAGGAAGTGAATCATCCATATCACCTAGTCCTAGTCAAAGCACCAAACCGTTATCGCCACCGGATAAGGCTGTTCCAGCCCCATCAACTGCTGAAAGGATTTTTCCACCACCTATGCGACCAATTCCACCTCAAAGGAAAGCTCCAGCTCCTGTTGCAACGCCTCCTGCAAATTTGCCTAAAACTTCACCAGCCCCAGTTGCAACACCTTCTACCAATGAGCCTAAAGTTTCACCAATTAGCCATTCAACTAATAATGGAAGTTTGCCTCCTCCGCAGCCAATTTCACCAGCTCCTGTGTTCAATATACCGAAACATTTGCCGGTGAATCAGTCAACTGAACCTAGAAGTTTGCCTCCAACTGTCCATAGAAGGAATTCCAGTATCAGTCACACATTGGAACCAGTTTCACAAGCACCGGTTGCAGATCCTCCGACTAATTTTCCAAAAATTTCGCCAGTCAGTCAACCCTCTCAAAATGGAAGTTTTCCACCTAATGTTCATAATACAACTGTGCATAAGGGACACACTCACACTCCAGAACCAGTAATACCACCACCAATAAGTACATTTCCGGTAGATCCACCATTGATCCACCCAGTCATACCAGCAGCACCTCCAAATGAAGTACCAGCACCTGTCATCTCTCCCCCATTAACACCATCCAGAAGCTTCAATGGGAAAAACGGTGGAGAACCTGTTTCTGCGCCATTGTACAGAACACCCAAGTCACCACCAGCTATAGTTCATTCCCCTGCTCAAGCTCCTTCTGCAAATAAAGCAAGGCCATTTCATCATGCTCCTGAGCCATTGATTTCACCTCCTAAACCTCCTTTCAACAAAGAAGATCACTCTCCTGCATCTTCACCTTCTACCACATTTCATAAGCATCAGCATACACGGAACACGATAACCAGTCCAGCTCCTGCATCATCATATTTCGTTGCTCCTCCAACTTCCAAACACCAAGATAAACCAATTTCTCCCTCGTTTCTTCCTACAAGTAGACGAAGACATAATGCTCCTGCACCAATGAACAGAGGTTCTGCAGATTCTCCGTTTACCTTCCCTATTCAATCACCAGTGAGCCAGGTTTCACCTGCTCCTTCTCCATCATTCAAGACTTTCCCCCACTCAACAAAAAGTAAGAAAGTTCCATTTCATCCTCCTAAAATATCTCCTCAGCGGTCTCTTTCTAAGAGCCCTAAGAAGCCAATATTGCCTCGAGTTCAAGCATTGCCACCCCCACCTCCCAATGAAGATTGTTTATCATTTGTTTGCTCGGAGCCTTATACGAATTCTCCACCCGGGGTGCCTTGCATGTGTATCTGGCCCATGAGAGTTGGTCTTCGCCTCAATGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCGGAGCTTGCTTCTGAAATATCCACAGGTGTTTTTATGAAACAAAGTCAAGTCCGTATTATGGGAGCCAATGCAGCAACTGATCAGCCAGATAAAACTGATGCCCTTATAGATTTGGTACCACTTGGGGAAACATTTGACAACACTACAGCCTTTTTAACTTCGGATAGATTTTGGCACAAAAAAGTTGTTATAAAATCTTCTTACTTCGGTGATTATGAAGTGTTATATATAAGCTATCCAGGCTTACCTCCATCTCCTCCATTACCACCTTCAAGCGTTAACATGATAGATGGTGGCCCGTATACAAATAATGGCAACAATGGTAGGACAATAAAGCCTCTTGGGGTTGACATACAGAAGAGGCCGCATAAAAGTGGACTTAGCAAGGGCATTATAGCCATTATTGCTCTTTCATCTTTTCTAGCAATTGTTTTATGCTCTGCCGCTGTTTTTGCATTAATTAAGTTCAGAGATCATGTTCCCGAGTCTCAACCAACATCAACCCCACGGGTTTATCCGCCATCTCTTAACAAAACACCAGGTACTGCTGGACCATCAAATGGAGGTGCAGTTGCTTCAGCTTCAACGTCATTTCGATCTAGCATTGCTGCTTACGCAGGATCTGCTAAGACTTTTAGTATGAACGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGTCTCGTTTATAGCGGTAACCTTGAAGATGGGTCAAAAGTAGCCTTCAAAGTTCTAAAGAGGGAGGATCATCATGGTGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGTCTTCACCATAGAAATTTGGTGAAGTTGGTCGGTATATGTACAGAACTCAGCTTCCGATGTCTAGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGACAGGGAAAAAAGTCCACTTGATTGGAGTGCTCGAATAAAGATAGCACTTGGTGCTGCTCGTGGTCTCGCTTATCTGCATGAAGATTCAAGTCCACATGTCATACATAGGGACTTCAAATCTAGCAATATATTATTGGAAAATGATTTTACACCGAAAGTATCTGACTTTGGATTGGCTCGAACGGCAGCTGATGAGGATAACAGACACATATCTACCCGTGTCATGGGAACTTTCGGTTATGTGGCTCCTGAGTACGCAATGACAGGACATCTTCTCGTGAAGAGTGATGTATACAGCTATGGTGTTGTCCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTGGACTTTTCACAACCGCCTGGTCAAGAGAATCTTGTTGCATGGGCTCGTCCACTCCTAACAAGCAGAGAAGGACTCGAAGTAATAATTGATCCATCTCTAGGAAGTAATGTGCCTTTTGATAGTGTAGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAGCCAGAGGTTTCGGATCGTCCTTTCATGGGCGAGGTTGTTCAGGCTTTGAAACTCGTGTGTAATGAATGTGATGAAGCAAAAGAAGCCGGTTCAACAAGTTCTAACAAGGACGGTTCATCTTCTGATTTCTATACTGTTACTGAACAACTACCAGATAATTTCCAAAGCCATTTCGCAGCCTCCAACTACGATTTTGGAGTTGATATCGAAAATGGCTTGTCAACATCAGAAATATTCAGCTCATCGGCAAGATTTGAAAGGCAAGCATCTGGATCATTTAGAAGACATTCATATTCAGGTCCTCTAAGAACCGGAAGAAGCAAACGGTTATGGCATATAATTCGAAAGCTTTCTGGCGGTAGTGTCAGTGAACACGGAGATTCGTTAAGGTAA

Protein sequence

>Msa0283860

MRVVLPLILICVFGFVVEAQGSEGTIISPSPAFLPGVHPEGEAPGPIHNGQSWRSTASSPSDPDGSVISPSPATLPMDPSSGEAPSLLHPNGTLLQPPVALPPSISAPPPQKIKGIESSISPSPSPSTRSISLPNNSVPAPSTAERNLPPSMQPIPPLIKTPTVSPPISTPTAPAPVATPTGNLPKTSPVSQPIKRGSLPPNVDNRNESKSHNPEPISPGSFLHPSLASPPPSPSAKSLSPPYKAVPAPSTAERNFPPPMQPIPPQREAPIVRPPISAPIAQAPVAIPPANLPKTSPISQPIDHGSLPPNVDKRNESNSHNLEPVSPGSFLHPPVALQPPTSAPPPQKTKGSESSISPSPSQSTKPLSPPDKAVPAPSTAERIFPPPMRPIPPQRKAPAPVATPPANLPKTSPAPVATPSTNEPKVSPISHSTNNGSLPPPQPISPAPVFNIPKHLPVNQSTEPRSLPPTVHRRNSSISHTLEPVSQAPVADPPTNFPKISPVSQPSQNGSFPPNVHNTTVHKGHTHTPEPVIPPPISTFPVDPPLIHPVIPAAPPNEVPAPVISPPLTPSRSFNGKNGGEPVSAPLYRTPKSPPAIVHSPAQAPSANKARPFHHAPEPLISPPKPPFNKEDHSPASSPSTTFHKHQHTRNTITSPAPASSYFVAPPTSKHQDKPISPSFLPTSRRRHNAPAPMNRGSADSPFTFPIQSPVSQVSPAPSPSFKTFPHSTKSKKVPFHPPKISPQRSLSKSPKKPILPRVQALPPPPPNEDCLSFVCSEPYTNSPPGVPCMCIWPMRVGLRLNVPLYTFFPLVSELASEISTGVFMKQSQVRIMGANAATDQPDKTDALIDLVPLGETFDNTTAFLTSDRFWHKKVVIKSSYFGDYEVLYISYPGLPPSPPLPPSSVNMIDGGPYTNNGNNGRTIKPLGVDIQKRPHKSGLSKGIIAIIALSSFLAIVLCSAAVFALIKFRDHVPESQPTSTPRVYPPSLNKTPGTAGPSNGGAVASASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYSGNLEDGSKVAFKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLVGICTELSFRCLVYELIPNGSVESHLHGVDREKSPLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEVIIDPSLGSNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTSSNKDGSSSDFYTVTEQLPDNFQSHFAASNYDFGVDIENGLSTSEIFSSSARFERQASGSFRRHSYSGPLRTGRSKRLWHIIRKLSGGSVSEHGDSLR*