AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0289590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0289590 MtrunA17_Chr5g0400061 73.585 53 5 1 59 102 16 68 1.85e-16 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0289590 AT4G17140.1 71.698 53 6 1 59 102 16 68 5.23e-16 73.6
Msa0289590 AT4G17140.2 71.698 53 6 1 59 102 16 68 5.28e-16 73.6
Msa0289590 AT4G17140.3 71.698 53 6 1 59 102 16 68 5.38e-16 73.6

Find 114 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGAGTAGCTTACAATTTC+TGG 0.155113 2_3:-35817073 Msa0289590:three_prime_UTR
CTTCTCAGATATGCATATTC+TGG 0.176517 2_3:-35818419 Msa0289590:CDS
GGTTAATAATATTTGATTAA+AGG 0.189723 2_3:-35816695 Msa0289590:three_prime_UTR
CTTAGTTTGATTGTGTTATT+TGG 0.200672 2_3:-35817141 Msa0289590:three_prime_UTR
AAATGGATGAACTTTGTTTC+TGG 0.223376 2_3:-35818358 Msa0289590:CDS
ATTAAATGAATAATGAAATT+TGG 0.229133 2_3:-35817100 Msa0289590:three_prime_UTR
GCGCAGTAGTGGTTCTGTTT+TGG 0.247233 2_3:-35815216 Msa0289590:three_prime_UTR
TCAATGCCAAATATATAAAA+TGG 0.258739 2_3:+35817565 None:intergenic
AAATGGTGTCTTGGCATTAA+AGG 0.268839 2_3:-35815257 Msa0289590:three_prime_UTR
TTAATGCCAAGACACCATTT+TGG 0.269941 2_3:+35815260 None:intergenic
TATAATAACAAAATAGAAAT+AGG 0.274155 2_3:+35816972 None:intergenic
GGTAAGAACAGTAGTTAATA+TGG 0.285239 2_3:+35817662 None:intergenic
CTTCATCAACATATTTGATT+TGG 0.290460 2_3:-35816570 Msa0289590:three_prime_UTR
GTTGGCTAATCAAATACTTT+AGG 0.291016 2_3:-35816782 Msa0289590:three_prime_UTR
GAAAGAAGGAAGAGGGGATT+AGG 0.322092 2_3:+35816404 None:intergenic
TCTTGGATCCGTTAAACTTA+AGG 0.326640 2_3:-35817695 Msa0289590:CDS
AAAGGCTGGGGAGTATCTTC+TGG 0.335547 2_3:-35815239 Msa0289590:three_prime_UTR
TGATAATGGTGCTGGTACTA+TGG 0.338989 2_3:-35817488 Msa0289590:three_prime_UTR
AGCTGCCTGCTGGTTCGGTT+TGG 0.348770 2_3:-35815078 None:intergenic
GTACTCTTTCTCATCAGTTT+AGG 0.349525 2_3:-35816728 Msa0289590:three_prime_UTR
GCGGTTCTGTCATAGGCTGC+TGG 0.363105 2_3:-35815121 Msa0289590:three_prime_UTR
AATGACATTGGAACCCAAAA+TGG 0.366644 2_3:-35815274 Msa0289590:three_prime_UTR
TCTCATCAGTTTAGGCAGTC+TGG 0.370253 2_3:-35816720 Msa0289590:three_prime_UTR
TGCTTCTGTATATGTGATAA+TGG 0.374178 2_3:-35817502 Msa0289590:three_prime_UTR
CTTCTAACAAAATTTAAGAT+AGG 0.377485 2_3:-35816629 Msa0289590:three_prime_UTR
TTTGTTTCTGGTATCAATAC+TGG 0.378151 2_3:-35818346 Msa0289590:intron
CATCAACATATTTGATTTGG+TGG 0.379546 2_3:-35816567 Msa0289590:three_prime_UTR
TTATCAGCTGCCTGCTGGTT+CGG 0.380280 2_3:-35815083 Msa0289590:three_prime_UTR
TATGGTTGCGGTTCTGTCAT+AGG 0.380625 2_3:-35815128 Msa0289590:three_prime_UTR
CCCACCAACCTTAAGTTTAA+CGG 0.380953 2_3:+35817687 None:intergenic
AATTTAAGATAGGATAATAA+TGG 0.406302 2_3:-35816619 Msa0289590:three_prime_UTR
CCTCCGGTTCCATTCAATAT+CGG 0.406977 2_3:-35820492 Msa0289590:CDS
CAAATACTTTAGGTAATTTG+TGG 0.407492 2_3:-35816772 Msa0289590:three_prime_UTR
CACTGCTGCTGCTATGGTTG+CGG 0.417407 2_3:-35815140 Msa0289590:three_prime_UTR
CAGCTTAGTGAAGTCTATCT+AGG 0.426267 2_3:-35815325 Msa0289590:three_prime_UTR
ATGTAGAGAAAGAAGGAAGA+GGG 0.432023 2_3:+35816397 None:intergenic
TGAGAGAAACAAGGTTGAAA+TGG 0.432547 2_3:-35818375 Msa0289590:CDS
TCCCACTGTTCAGTTTCCTC+CGG 0.438726 2_3:-35820508 Msa0289590:CDS
TTGTTGCACTGCTGCTGCTA+TGG 0.445565 2_3:-35815146 Msa0289590:three_prime_UTR
TGGTGCTACCATCGTACTAC+TGG 0.447891 2_3:-35817053 Msa0289590:three_prime_UTR
GTCTATCTAGGTTGAAGATT+CGG 0.448770 2_3:-35815313 Msa0289590:three_prime_UTR
TTTAAAGCATTTAGAGCCTC+CGG 0.448817 2_3:+35817745 None:intergenic
TTGTAACCTGTACGAGATCA+AGG 0.448896 2_3:-35815173 Msa0289590:three_prime_UTR
ATTAGGAGAGATGAGGATGC+AGG 0.450351 2_3:+35816421 None:intergenic
ATAATACCCCTTTGTCGAGT+TGG 0.456900 2_3:-35816800 Msa0289590:three_prime_UTR
ATAATAATGGAGAGCATTTG+AGG 0.459348 2_3:-35816606 Msa0289590:three_prime_UTR
AAACCTGCCTTTACCTTCAC+TGG 0.460466 2_3:+35817718 None:intergenic
TGATTAGCCAACTCGACAAA+GGG 0.461418 2_3:+35816793 None:intergenic
GACGAGGAACCGAGCCGCAC+AGG 0.466288 2_3:+35820457 None:intergenic
GAAGAATATGCAGTTGAAAC+CGG 0.469596 2_3:-35817764 Msa0289590:CDS
TCCGTTAAACTTAAGGTTGG+TGG 0.475380 2_3:-35817688 Msa0289590:CDS
TCCTCGTCGTCGTTGTTCCA+AGG 0.479776 2_3:-35820442 Msa0289590:intron
AGAGAAAATGTAGAGAAAGA+AGG 0.480203 2_3:+35816390 None:intergenic
CCGTTAAACTTAAGGTTGGT+GGG 0.482227 2_3:-35817687 Msa0289590:CDS
ATGCCGATATTGAATGGAAC+CGG 0.484927 2_3:+35820489 None:intergenic
GGTGTCTTGGCATTAAAGGC+TGG 0.485262 2_3:-35815253 Msa0289590:three_prime_UTR
TTCAACCTTGTTTCTCTCAA+CGG 0.490268 2_3:+35818379 None:intergenic
ATGAAGCTTACGAACAACTT+TGG 0.494255 2_3:+35817618 None:intergenic
GTGTCTTGGCATTAAAGGCT+GGG 0.494462 2_3:-35815252 Msa0289590:three_prime_UTR
AAGGCTGGGGAGTATCTTCT+GGG 0.495935 2_3:-35815238 Msa0289590:three_prime_UTR
CGGTTCTGTCATAGGCTGCT+GGG 0.496371 2_3:-35815120 Msa0289590:three_prime_UTR
TGAGAAAGAGTACAATCAAA+GGG 0.503064 2_3:+35816738 None:intergenic
TGTAGAGAAAGAAGGAAGAG+GGG 0.507527 2_3:+35816398 None:intergenic
AAGCAAGTGACTTAAAGAAC+AGG 0.507803 2_3:+35816530 None:intergenic
TGGAACCCAAAATGGTGTCT+TGG 0.514856 2_3:-35815266 Msa0289590:three_prime_UTR
ATTTGATTTGGTGGCATCTG+AGG 0.515209 2_3:-35816558 Msa0289590:three_prime_UTR
TTGAAACATTCATAGTGAGT+TGG 0.516711 2_3:+35817376 None:intergenic
AAAATTGCCAGTGAAGGTAA+AGG 0.520244 2_3:-35817725 Msa0289590:CDS
CTGAGAATGCCGATATTGAA+TGG 0.523258 2_3:+35820483 None:intergenic
TGCTTTAAAATTGCCAGTGA+AGG 0.523281 2_3:-35817731 Msa0289590:CDS
CTCTTAATCACTACCTGTAG+TGG 0.526284 2_3:+35816324 None:intergenic
TCTCAGCATCCTGTGCGGCT+CGG 0.526298 2_3:-35820466 Msa0289590:CDS
ATGAGAAAGAGTACAATCAA+AGG 0.526627 2_3:+35816737 None:intergenic
GTATCTTCTGGGCGCAGTAG+TGG 0.528252 2_3:-35815227 Msa0289590:three_prime_UTR
TGTATATGTGATAATGGTGC+TGG 0.532299 2_3:-35817496 Msa0289590:three_prime_UTR
AATGTAGAGAAAGAAGGAAG+AGG 0.534398 2_3:+35816396 None:intergenic
GTAAGAACAGTAGTTAATAT+GGG 0.538345 2_3:+35817663 None:intergenic
ACAACAAAATATGAGTGTCC+TGG 0.555139 2_3:+35817334 None:intergenic
TAATAATGGAGAGCATTTGA+GGG 0.556820 2_3:-35816605 Msa0289590:three_prime_UTR
GAACTGTTTGCAACATTCAG+TGG 0.559836 2_3:-35817466 Msa0289590:three_prime_UTR
TTGAGTTATATAAGACCTCA+AGG 0.561119 2_3:+35817269 None:intergenic
GGATCCGTTAAACTTAAGGT+TGG 0.565763 2_3:-35817691 Msa0289590:CDS
TTTAATTGGCAAAATTGGAG+AGG 0.568114 2_3:-35816863 Msa0289590:three_prime_UTR
AAACTCCCTTGATCTCGTAC+AGG 0.570305 2_3:+35815167 None:intergenic
GAGCATTTGAGGGTAAAGCT+TGG 0.573864 2_3:-35816595 Msa0289590:three_prime_UTR
TTGATTAGCCAACTCGACAA+AGG 0.573941 2_3:+35816792 None:intergenic
AGAGGGGATTAGGAGAGATG+AGG 0.577716 2_3:+35816414 None:intergenic
CCAATCCAAACCGAACCAGC+AGG 0.580535 2_3:+35815073 None:intergenic
ATAACTCAATTTGCTGTGTG+CGG 0.583665 2_3:-35817255 Msa0289590:three_prime_UTR
CGTTAAACTTAAGGTTGGTG+GGG 0.583698 2_3:-35817686 Msa0289590:CDS
ATCAGTTTAGGCAGTCTGGA+TGG 0.585517 2_3:-35816716 Msa0289590:three_prime_UTR
TTGCCAGTGAAGGTAAAGGC+AGG 0.585721 2_3:-35817721 Msa0289590:CDS
GATGAGCTTAGTTCCACTAC+AGG 0.590334 2_3:-35816337 Msa0289590:three_prime_UTR
GTTTGTGCTATGAATGACAT+TGG 0.594834 2_3:-35815286 Msa0289590:three_prime_UTR
ACAAGCACAACAGCAGAGGT+TGG 0.601407 2_3:-35816300 Msa0289590:three_prime_UTR
ACCGGAGGAAACTGAACAGT+GGG 0.602263 2_3:+35820507 None:intergenic
GCTACCATCGTACTACTGGA+TGG 0.602267 2_3:-35817049 Msa0289590:three_prime_UTR
TGTCTTGGCATTAAAGGCTG+GGG 0.617967 2_3:-35815251 Msa0289590:three_prime_UTR
GAGCACAAGCACAACAGCAG+AGG 0.626684 2_3:-35816304 Msa0289590:three_prime_UTR
ACCTTGGAACAACGACGACG+AGG 0.635088 2_3:+35820441 None:intergenic
TGTAACCTGTACGAGATCAA+GGG 0.641754 2_3:-35815172 Msa0289590:three_prime_UTR
TGAATAATGAAATTTGGTGA+AGG 0.646200 2_3:-35817094 Msa0289590:three_prime_UTR
GAATATGCAGTTGAAACCGG+AGG 0.661513 2_3:-35817761 Msa0289590:CDS
CAAAACCGTTGAGAGAAACA+AGG 0.662480 2_3:-35818384 Msa0289590:CDS
CCGATATTGAATGGAACCGG+AGG 0.662893 2_3:+35820492 None:intergenic
CAACAGCAGAGGTTGGACAA+AGG 0.669306 2_3:-35816293 Msa0289590:intron
TTCTGTCATAGGCTGCTGGG+AGG 0.680278 2_3:-35815117 Msa0289590:three_prime_UTR
TTGTCCATCCAGTAGTACGA+TGG 0.689124 2_3:+35817045 None:intergenic
GATTAGCCAACTCGACAAAG+GGG 0.690422 2_3:+35816794 None:intergenic
GAGAAAGAGTACAATCAAAG+GGG 0.703482 2_3:+35816739 None:intergenic
TGTCATTCATAGCACAAACA+CGG 0.704196 2_3:+35815290 None:intergenic
AACCGGAGGAAACTGAACAG+TGG 0.730525 2_3:+35820506 None:intergenic
GGCATTCTCAGCATCCTGTG+CGG 0.731992 2_3:-35820471 Msa0289590:CDS
AGGATGCAGGAAGTACACAG+AGG 0.766444 2_3:+35816434 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTATGTATGT+TGG - chr2_3:35815477-35815496 Msa0289590:intron 10.0%
!! GGAATTTAAAAAAAAAAAAT+TGG - chr2_3:35816189-35816208 Msa0289590:intron 10.0%
!! ATTAAATGAATAATGAAATT+TGG - chr2_3:35818499-35818518 Msa0289590:intron 10.0%
!! TATAATAACAAAATAGAAAT+AGG + chr2_3:35818630-35818649 None:intergenic 10.0%
!!! AAAAGTAAAATTTTGAATTA+TGG + chr2_3:35819096-35819115 None:intergenic 10.0%
!! AAAATTGAACAAAAAAAAAA+TGG + chr2_3:35819636-35819655 None:intergenic 10.0%
!! ATTAAATAATACCTGATTTA+AGG - chr2_3:35815685-35815704 Msa0289590:intron 15.0%
!! TTAAATAATACCTGATTTAA+GGG - chr2_3:35815686-35815705 Msa0289590:intron 15.0%
!!! CATTTAAAATAATTTCACTT+TGG - chr2_3:35815746-35815765 Msa0289590:intron 15.0%
!! AAAAAAAAAATTGGTTGATT+TGG - chr2_3:35816198-35816217 Msa0289590:intron 15.0%
!!! TCTTTAAGATTTATTTTTGT+TGG - chr2_3:35816494-35816513 Msa0289590:three_prime_UTR 15.0%
!! ATTAATTAACATTAACTGAT+TGG + chr2_3:35816913-35816932 None:intergenic 15.0%
!! AGTTAATGTTAATTAATGTA+GGG - chr2_3:35816916-35816935 Msa0289590:three_prime_UTR 15.0%
!! AAATTTCAATGAAGAATAAA+AGG + chr2_3:35817298-35817317 None:intergenic 15.0%
!!! TATTTTTACTAAGAAATCAT+AGG + chr2_3:35818010-35818029 None:intergenic 15.0%
!!! AGTTTTTCAAATTATAGAAA+TGG - chr2_3:35818430-35818449 Msa0289590:intron 15.0%
!!! TGTTATTATACATATTTTCT+TGG - chr2_3:35818640-35818659 Msa0289590:intron 15.0%
!!! AATTATGTATTTTGTCATTA+TGG - chr2_3:35818711-35818730 Msa0289590:intron 15.0%
!! GGTTAATAATATTTGATTAA+AGG - chr2_3:35818904-35818923 Msa0289590:intron 15.0%
!!! AATTTAAGATAGGATAATAA+TGG - chr2_3:35818980-35818999 Msa0289590:intron 15.0%
!! AATAAAAGCAATAAAAATTG+TGG + chr2_3:35819339-35819358 None:intergenic 15.0%
!!! TTCAAATTTTCTTATTTCTT+AGG - chr2_3:35819363-35819382 Msa0289590:intron 15.0%
!! TCAATGTTGATGTTAATTTA+TGG + chr2_3:35815405-35815424 None:intergenic 20.0%
!!! ATGTATGTTGGTTTTTTATT+TGG - chr2_3:35815489-35815508 Msa0289590:intron 20.0%
!!! TTATTTGGTGTTTGTTTTAT+TGG - chr2_3:35815504-35815523 Msa0289590:intron 20.0%
!! TATTGGAAATTATATGTTTG+TGG - chr2_3:35815521-35815540 Msa0289590:intron 20.0%
!!! ATGATAGAAGTGTTTTTATT+TGG - chr2_3:35815549-35815568 Msa0289590:intron 20.0%
!! TAATTAGAATATAGTCTCTT+TGG - chr2_3:35815595-35815614 Msa0289590:intron 20.0%
!! ATTCATCATATGAAAACATA+GGG + chr2_3:35815837-35815856 None:intergenic 20.0%
!!! TGCTTTATGTTGATAATTTT+TGG - chr2_3:35816108-35816127 Msa0289590:three_prime_UTR 20.0%
!!! GAATTGCTGTATTTTTATAT+AGG - chr2_3:35816286-35816305 Msa0289590:intron 20.0%
!! AATACATAAACAAAAGCAAA+GGG + chr2_3:35816549-35816568 None:intergenic 20.0%
!! AAATACATAAACAAAAGCAA+AGG + chr2_3:35816550-35816569 None:intergenic 20.0%
!!! TTGCTTTTGTTTATGTATTT+AGG - chr2_3:35816550-35816569 Msa0289590:three_prime_UTR 20.0%
!!! TGCTTTTGTTTATGTATTTA+GGG - chr2_3:35816551-35816570 Msa0289590:three_prime_UTR 20.0%
!! TTATTTCATACTTTGTGTTT+CGG - chr2_3:35816776-35816795 Msa0289590:three_prime_UTR 20.0%
!! CAGTTAATGTTAATTAATGT+AGG - chr2_3:35816915-35816934 Msa0289590:three_prime_UTR 20.0%
!! GTTAATGTTAATTAATGTAG+GGG - chr2_3:35816917-35816936 Msa0289590:three_prime_UTR 20.0%
!!! TGTTTAAAGTAGAAAGAAAT+AGG - chr2_3:35817415-35817434 Msa0289590:three_prime_UTR 20.0%
!!! TAGCATCCATTTTATATATT+TGG - chr2_3:35818028-35818047 Msa0289590:intron 20.0%
!! TCAATGCCAAATATATAAAA+TGG + chr2_3:35818037-35818056 None:intergenic 20.0%
!!! TTTCTTTTTAGTTTCAGTAA+TGG - chr2_3:35818682-35818701 Msa0289590:intron 20.0%
!!! TTGTCATTATGGTTTTTAAT+TGG - chr2_3:35818722-35818741 Msa0289590:intron 20.0%
!!! CTTCTAACAAAATTTAAGAT+AGG - chr2_3:35818970-35818989 Msa0289590:intron 20.0%
!! TATTCAACTATTACAATAAG+AGG + chr2_3:35819573-35819592 None:intergenic 20.0%
!! CAATTATGTTTCTTATATCA+TGG - chr2_3:35819725-35819744 Msa0289590:intron 20.0%
!! GATTTACTTATTCATGTATA+TGG - chr2_3:35819862-35819881 Msa0289590:intron 20.0%
!! TTTGAACTCTAAATTAATTC+AGG - chr2_3:35819918-35819937 Msa0289590:intron 20.0%
!! CTTATTTGATATATCATATG+TGG - chr2_3:35819944-35819963 Msa0289590:intron 20.0%
!!! AGTTTTGATTTTTACTCATT+TGG - chr2_3:35820214-35820233 Msa0289590:intron 20.0%
!!! AGTGATGTGTTTTGATTTAA+TGG - chr2_3:35815276-35815295 Msa0289590:three_prime_UTR 25.0%
! TTTGTTCCTCTTTGATTAAA+TGG - chr2_3:35815332-35815351 Msa0289590:intron 25.0%
! TTATATCAGTGTTATGAGTT+CGG - chr2_3:35815427-35815446 Msa0289590:intron 25.0%
!!! TTTGGTCTCATCATTTTTTT+GGG - chr2_3:35815613-35815632 Msa0289590:intron 25.0%
! ACAATTAGAGTTGAAATGTT+TGG - chr2_3:35815779-35815798 Msa0289590:intron 25.0%
! CAATTAGAGTTGAAATGTTT+GGG - chr2_3:35815780-35815799 Msa0289590:intron 25.0%
! CATTCATCATATGAAAACAT+AGG + chr2_3:35815838-35815857 None:intergenic 25.0%
! TCAACATAAAGCATAAACTA+CGG + chr2_3:35816101-35816120 None:intergenic 25.0%
!! TGGTTGTATGATTTTGTTAA+AGG - chr2_3:35816218-35816237 Msa0289590:intron 25.0%
! TGAAAAAGGATTTAGATGTT+TGG - chr2_3:35816347-35816366 Msa0289590:three_prime_UTR 25.0%
! GATTTAGATGTTTGGAAAAT+TGG - chr2_3:35816355-35816374 Msa0289590:three_prime_UTR 25.0%
!!! GCTTTTGTTTATGTATTTAG+GGG - chr2_3:35816552-35816571 Msa0289590:three_prime_UTR 25.0%
!!! CTTTTGTTTATGTATTTAGG+GGG - chr2_3:35816553-35816572 Msa0289590:three_prime_UTR 25.0%
!! CAGAAAGATGTCTAATTTTT+AGG - chr2_3:35816691-35816710 Msa0289590:three_prime_UTR 25.0%
!! TTTAGGTGACATTTTTAATG+AGG - chr2_3:35816708-35816727 Msa0289590:three_prime_UTR 25.0%
! AAAACATCAGTTTGCATTTA+CGG + chr2_3:35817027-35817046 None:intergenic 25.0%
! TTCAATGAAGAATAAAAGGA+AGG + chr2_3:35817294-35817313 None:intergenic 25.0%
! GTAGGTATCTATTGAATAAA+TGG - chr2_3:35817612-35817631 Msa0289590:CDS 25.0%
! GTAAGAACAGTAGTTAATAT+GGG + chr2_3:35817939-35817958 None:intergenic 25.0%
!!! TAGACAGAAATTGTTTTAGA+GGG + chr2_3:35817961-35817980 None:intergenic 25.0%
! AGAAGGCTATTTGAAAAATA+AGG - chr2_3:35818302-35818321 Msa0289590:intron 25.0%
!! CTTAGTTTGATTGTGTTATT+TGG - chr2_3:35818458-35818477 Msa0289590:intron 25.0%
!! TGAATAATGAAATTTGGTGA+AGG - chr2_3:35818505-35818524 Msa0289590:intron 25.0%
!!! TGGTTTTTAATTGGCAAAAT+TGG - chr2_3:35818731-35818750 Msa0289590:intron 25.0%
! CAAATACTTTAGGTAATTTG+TGG - chr2_3:35818827-35818846 Msa0289590:intron 25.0%
!! CAATAGTTAGTATCAGTTTT+AGG - chr2_3:35818935-35818954 Msa0289590:intron 25.0%
!!! TAGTATCAGTTTTAGGTAAT+TGG - chr2_3:35818942-35818961 Msa0289590:intron 25.0%
! CTTCATCAACATATTTGATT+TGG - chr2_3:35819029-35819048 Msa0289590:intron 25.0%
! TACAAATGTTAATGACAACA+AGG - chr2_3:35819790-35819809 Msa0289590:intron 25.0%
! AAAGTAAAACATAGGAGAAT+GGG + chr2_3:35819830-35819849 None:intergenic 25.0%
!!! GCTTTTTGAAAGTAAAACAT+AGG + chr2_3:35819838-35819857 None:intergenic 25.0%
! TAGATAAATCGCAACATTAA+AGG + chr2_3:35820078-35820097 None:intergenic 25.0%
AACACATCACTACAACAAAA+AGG + chr2_3:35815267-35815286 None:intergenic 30.0%
AATCAGCCATTTAATCAAAG+AGG + chr2_3:35815341-35815360 None:intergenic 30.0%
!!! CTTTGGTCTCATCATTTTTT+TGG - chr2_3:35815612-35815631 Msa0289590:intron 30.0%
!!! TTGGTCTCATCATTTTTTTG+GGG - chr2_3:35815614-35815633 Msa0289590:intron 30.0%
!!! TCATCATTTTTTTGGGGATT+TGG - chr2_3:35815620-35815639 Msa0289590:intron 30.0%
CATTGATGCTATAGCAAAAA+AGG + chr2_3:35815965-35815984 None:intergenic 30.0%
!! TCTTTGAGAAGCATTTGAAT+TGG - chr2_3:35816005-35816024 Msa0289590:intron 30.0%
!!! TGTTTTTAGTGAGTTGTGTA+TGG - chr2_3:35816070-35816089 Msa0289590:intron 30.0%
!!! TGATAATTTTTGGTCTGTGA+TGG - chr2_3:35816118-35816137 Msa0289590:intron 30.0%
! TTAGTTATTCGCTTGAGTTT+TGG - chr2_3:35816168-35816187 Msa0289590:intron 30.0%
ATCAGTGTTGTATTACAAAG+TGG - chr2_3:35816254-35816273 Msa0289590:intron 30.0%
!! ATGTTTGGAAAATTGGCTTT+AGG - chr2_3:35816362-35816381 Msa0289590:three_prime_UTR 30.0%
!! TGTTTGGAAAATTGGCTTTA+GGG - chr2_3:35816363-35816382 Msa0289590:three_prime_UTR 30.0%
AAAGGTTAGGGAAATTATGT+TGG - chr2_3:35816453-35816472 Msa0289590:three_prime_UTR 30.0%
TATGTTAAGCATTTACCTGT+TGG + chr2_3:35816750-35816769 None:intergenic 30.0%
!! TTCTAGGGTTTCAAATGTTA+GGG - chr2_3:35816829-35816848 Msa0289590:three_prime_UTR 30.0%
! TCCAAACTAAGCCTTTTAAT+TGG - chr2_3:35816984-35817003 Msa0289590:three_prime_UTR 30.0%
! AAATGGATGAACTTTGTTTC+TGG - chr2_3:35817241-35817260 Msa0289590:three_prime_UTR 30.0%
!! TTTGTTTCTGGTATCAATAC+TGG - chr2_3:35817253-35817272 Msa0289590:three_prime_UTR 30.0%
!!! AAACGGATCTGCTTTTTAAA+TGG - chr2_3:35817487-35817506 Msa0289590:three_prime_UTR 30.0%
TTTGATGTGTTCAACTCAAA+AGG - chr2_3:35817515-35817534 Msa0289590:three_prime_UTR 30.0%
AGAACACATATAATTGTGTC+TGG - chr2_3:35817563-35817582 Msa0289590:three_prime_UTR 30.0%
! GGAATTTTGAACTTCATTGA+TGG - chr2_3:35817584-35817603 Msa0289590:exon 30.0%
TGAGAGATTCAATGAGTTTA+TGG - chr2_3:35817696-35817715 Msa0289590:CDS 30.0%
!! CTAAAACTGAACTTTGAAAC+AGG - chr2_3:35817800-35817819 Msa0289590:intron 30.0%
GGTAAGAACAGTAGTTAATA+TGG + chr2_3:35817940-35817959 None:intergenic 30.0%
!!! GTAGACAGAAATTGTTTTAG+AGG + chr2_3:35817962-35817981 None:intergenic 30.0%
TGCTTCTGTATATGTGATAA+TGG - chr2_3:35818097-35818116 Msa0289590:intron 30.0%
TTGAAACATTCATAGTGAGT+TGG + chr2_3:35818226-35818245 None:intergenic 30.0%
!!! GTTGCTATTTTTTAAGTTCC+AGG - chr2_3:35818247-35818266 Msa0289590:intron 30.0%
AAAAATAAGGTCATTCCTTG+AGG - chr2_3:35818315-35818334 Msa0289590:intron 30.0%
TTGAGTTATATAAGACCTCA+AGG + chr2_3:35818333-35818352 None:intergenic 30.0%
! ATTTTCTTGGCATGTCTTTT+TGG - chr2_3:35818653-35818672 Msa0289590:intron 30.0%
! TTTTCTTGGCATGTCTTTTT+GGG - chr2_3:35818654-35818673 Msa0289590:intron 30.0%
TTTAATTGGCAAAATTGGAG+AGG - chr2_3:35818736-35818755 Msa0289590:intron 30.0%
GTTGGCTAATCAAATACTTT+AGG - chr2_3:35818817-35818836 Msa0289590:intron 30.0%
! TGAGAAAGAGTACAATCAAA+GGG + chr2_3:35818864-35818883 None:intergenic 30.0%
! ATGAGAAAGAGTACAATCAA+AGG + chr2_3:35818865-35818884 None:intergenic 30.0%
!! ATAATAATGGAGAGCATTTG+AGG - chr2_3:35818993-35819012 Msa0289590:intron 30.0%
!! TAATAATGGAGAGCATTTGA+GGG - chr2_3:35818994-35819013 Msa0289590:intron 30.0%
!! CATCAACATATTTGATTTGG+TGG - chr2_3:35819032-35819051 Msa0289590:intron 30.0%
AGAGAAAATGTAGAGAAAGA+AGG + chr2_3:35819212-35819231 None:intergenic 30.0%
GTATGTGTGAAAACTGAAAT+GGG + chr2_3:35819663-35819682 None:intergenic 30.0%
TGTATGTGTGAAAACTGAAA+TGG + chr2_3:35819664-35819683 None:intergenic 30.0%
GAAAGTAAAACATAGGAGAA+TGG + chr2_3:35819831-35819850 None:intergenic 30.0%
! TAATTTAGAGTTCAAAGCAG+TGG + chr2_3:35819914-35819933 None:intergenic 30.0%
! ATTTTCCCTCAGTATATTTC+AGG - chr2_3:35819982-35820001 Msa0289590:intron 30.0%
TACAACCTGAAATATACTGA+GGG + chr2_3:35819990-35820009 None:intergenic 30.0%
GTATTCTGCATTGAAGTATA+CGG - chr2_3:35820115-35820134 Msa0289590:intron 30.0%
ACGAAAATCTACACAAACCT+TGG + chr2_3:35815177-35815196 None:intergenic 35.0%
!!! GTTTTGATTTAATGGCCTGA+TGG - chr2_3:35815284-35815303 Msa0289590:three_prime_UTR 35.0%
TCATAATCTCTCAATCCATC+AGG + chr2_3:35815302-35815321 None:intergenic 35.0%
TGTTATGAGTTCGGTTATTC+TGG - chr2_3:35815436-35815455 Msa0289590:intron 35.0%
GTTATGAGTTCGGTTATTCT+GGG - chr2_3:35815437-35815456 Msa0289590:intron 35.0%
!!! TACCTGATTTAAGGGCATTT+TGG - chr2_3:35815694-35815713 Msa0289590:intron 35.0%
CTTGCAACAATGAACTCAAT+AGG - chr2_3:35815869-35815888 Msa0289590:intron 35.0%
ACAATGAACTCAATAGGTCA+AGG - chr2_3:35815875-35815894 Msa0289590:intron 35.0%
ATTACAGAGTGAAAGGTAGT+GGG + chr2_3:35815927-35815946 None:intergenic 35.0%
ACACAAGATTACAGAGTGAA+AGG + chr2_3:35815934-35815953 None:intergenic 35.0%
!! TTTTGCTATAGCATCAATGC+AGG - chr2_3:35815966-35815985 Msa0289590:intron 35.0%
GAGCATATTGTTGATCTGAA+AGG - chr2_3:35816031-35816050 Msa0289590:intron 35.0%
TGATGGAAGAGTTTCTAACA+TGG - chr2_3:35816135-35816154 Msa0289590:intron 35.0%
ATATAGGTTTCGCAATGTCT+AGG - chr2_3:35816302-35816321 Msa0289590:three_prime_UTR 35.0%
TATAGGTTTCGCAATGTCTA+GGG - chr2_3:35816303-35816322 Msa0289590:three_prime_UTR 35.0%
CTGTATCAAGGACTTGAAAA+AGG - chr2_3:35816333-35816352 Msa0289590:three_prime_UTR 35.0%
! GCTAATCATTGGTGATTCAA+AGG - chr2_3:35816435-35816454 Msa0289590:three_prime_UTR 35.0%
! TCATTGGTGATTCAAAGGTT+AGG - chr2_3:35816440-35816459 Msa0289590:three_prime_UTR 35.0%
! CATTGGTGATTCAAAGGTTA+GGG - chr2_3:35816441-35816460 Msa0289590:three_prime_UTR 35.0%
! AGTGATAAGCAGGGAATTTT+GGG + chr2_3:35816668-35816687 None:intergenic 35.0%
! AGGTGACATTTTTAATGAGG+AGG - chr2_3:35816711-35816730 Msa0289590:three_prime_UTR 35.0%
! TTGTTGTTGCTGTTGTTCTA+GGG - chr2_3:35816814-35816833 Msa0289590:three_prime_UTR 35.0%
!! GTTCTAGGGTTTCAAATGTT+AGG - chr2_3:35816828-35816847 Msa0289590:three_prime_UTR 35.0%
! TCTAGGGTTTCAAATGTTAG+GGG - chr2_3:35816830-35816849 Msa0289590:three_prime_UTR 35.0%
TTAACTGATTGGACTATGCA+GGG + chr2_3:35816902-35816921 None:intergenic 35.0%
ATTAACTGATTGGACTATGC+AGG + chr2_3:35816903-35816922 None:intergenic 35.0%
! TAAAAGGCTTAGTTTGGATG+CGG + chr2_3:35816982-35817001 None:intergenic 35.0%
GCCAATTAAAAGGCTTAGTT+TGG + chr2_3:35816988-35817007 None:intergenic 35.0%
GTTTGCATTTACGGAAAACA+TGG + chr2_3:35817018-35817037 None:intergenic 35.0%
TGTAAATGTTGACATGTGTG+CGG - chr2_3:35817059-35817078 Msa0289590:three_prime_UTR 35.0%
CTTCTCAGATATGCATATTC+TGG - chr2_3:35817180-35817199 Msa0289590:three_prime_UTR 35.0%
! TTCAACCTTGTTTCTCTCAA+CGG + chr2_3:35817223-35817242 None:intergenic 35.0%
TGAGAGAAACAAGGTTGAAA+TGG - chr2_3:35817224-35817243 Msa0289590:three_prime_UTR 35.0%
CTTGAGTTTGTGTCAAGAAA+CGG - chr2_3:35817470-35817489 Msa0289590:three_prime_UTR 35.0%
ACTTATAACAGTTCATACGC+AGG + chr2_3:35817650-35817669 None:intergenic 35.0%
GAAGAATATGCAGTTGAAAC+CGG - chr2_3:35817835-35817854 Msa0289590:intron 35.0%
! TTTAAAGCATTTAGAGCCTC+CGG + chr2_3:35817857-35817876 None:intergenic 35.0%
!! TGCTTTAAAATTGCCAGTGA+AGG - chr2_3:35817868-35817887 Msa0289590:intron 35.0%
AAAATTGCCAGTGAAGGTAA+AGG - chr2_3:35817874-35817893 Msa0289590:intron 35.0%
TCTTGGATCCGTTAAACTTA+AGG - chr2_3:35817904-35817923 Msa0289590:intron 35.0%
ATGAAGCTTACGAACAACTT+TGG + chr2_3:35817984-35818003 None:intergenic 35.0%
!! TGTATATGTGATAATGGTGC+TGG - chr2_3:35818103-35818122 Msa0289590:intron 35.0%
ACAACAAAATATGAGTGTCC+TGG + chr2_3:35818268-35818287 None:intergenic 35.0%
! TGTTCTTTTGCAACTTGAGA+AGG - chr2_3:35818285-35818304 Msa0289590:intron 35.0%
!! ATAACTCAATTTGCTGTGTG+CGG - chr2_3:35818344-35818363 Msa0289590:intron 35.0%
! GACAACATGATAGAGCTTTT+AGG - chr2_3:35818572-35818591 Msa0289590:intron 35.0%
! CTTTTCATTGTGAGTGCTAT+TGG - chr2_3:35818597-35818616 Msa0289590:intron 35.0%
! GAGAAAGAGTACAATCAAAG+GGG + chr2_3:35818863-35818882 None:intergenic 35.0%
GTACTCTTTCTCATCAGTTT+AGG - chr2_3:35818871-35818890 Msa0289590:intron 35.0%
AAGCAAGTGACTTAAAGAAC+AGG + chr2_3:35819072-35819091 None:intergenic 35.0%
ATGTAGAGAAAGAAGGAAGA+GGG + chr2_3:35819205-35819224 None:intergenic 35.0%
AATGTAGAGAAAGAAGGAAG+AGG + chr2_3:35819206-35819225 None:intergenic 35.0%
CAATCCAATAACCAAACCAT+CGG + chr2_3:35819429-35819448 None:intergenic 35.0%
TACTGAGGGAAAATGTTTCT+AGG + chr2_3:35819976-35819995 None:intergenic 35.0%
GTACAACCTGAAATATACTG+AGG + chr2_3:35819991-35820010 None:intergenic 35.0%
! GTCTATCTAGGTTGAAGATT+CGG - chr2_3:35820286-35820305 Msa0289590:intron 35.0%
TGTCATTCATAGCACAAACA+CGG + chr2_3:35820312-35820331 None:intergenic 35.0%
GTTTGTGCTATGAATGACAT+TGG - chr2_3:35820313-35820332 Msa0289590:intron 35.0%
AATGACATTGGAACCCAAAA+TGG - chr2_3:35820325-35820344 Msa0289590:intron 35.0%
! TAATGCCAAGACACCATTTT+GGG + chr2_3:35820341-35820360 None:intergenic 35.0%
! TTAATGCCAAGACACCATTT+TGG + chr2_3:35820342-35820361 None:intergenic 35.0%
AAATGGTGTCTTGGCATTAA+AGG - chr2_3:35820342-35820361 Msa0289590:intron 35.0%
ATGCCGATATTGAATGGAAC+CGG + chr2_3:35815113-35815132 None:intergenic 40.0%
CTGAGAATGCCGATATTGAA+TGG + chr2_3:35815119-35815138 None:intergenic 40.0%
AACAAAAAGGAACACATCGC+TGG + chr2_3:35815254-35815273 None:intergenic 40.0%
TCGGTTATTCTGGGTATGTT+TGG - chr2_3:35815446-35815465 Msa0289590:intron 40.0%
CTCCAAAATGCCCTTAAATC+AGG + chr2_3:35815699-35815718 None:intergenic 40.0%
!!! GGCATTTTGGAGCTAACTAT+TGG - chr2_3:35815707-35815726 Msa0289590:intron 40.0%
GATTACAGAGTGAAAGGTAG+TGG + chr2_3:35815928-35815947 None:intergenic 40.0%
ATAGGTTTCGCAATGTCTAG+GGG - chr2_3:35816304-35816323 Msa0289590:three_prime_UTR 40.0%
TGGATTGTTACTGCTAGCAA+TGG - chr2_3:35816397-35816416 Msa0289590:three_prime_UTR 40.0%
! CAATGATTAGCTCCATGTGT+CGG + chr2_3:35816426-35816445 None:intergenic 40.0%
! CAGTGATAAGCAGGGAATTT+TGG + chr2_3:35816669-35816688 None:intergenic 40.0%
TTTCTGCACAGTGATAAGCA+GGG + chr2_3:35816677-35816696 None:intergenic 40.0%
! GTTGTTGTTGCTGTTGTTCT+AGG - chr2_3:35816813-35816832 Msa0289590:three_prime_UTR 40.0%
GTGCTATATTCAGCGAGAAA+TGG + chr2_3:35817102-35817121 None:intergenic 40.0%
CAAAACCGTTGAGAGAAACA+AGG - chr2_3:35817215-35817234 Msa0289590:three_prime_UTR 40.0%
CGTTTCTTGACACAAACTCA+AGG + chr2_3:35817472-35817491 None:intergenic 40.0%
GATGTGTTCAACTCAAAAGG+TGG - chr2_3:35817518-35817537 Msa0289590:three_prime_UTR 40.0%
! ACTTCATTGATGGTTGCAGT+AGG - chr2_3:35817594-35817613 Msa0289590:exon 40.0%
! AAGGTAAAGGCAGGTTTTCT+TGG - chr2_3:35817887-35817906 Msa0289590:intron 40.0%
GGATCCGTTAAACTTAAGGT+TGG - chr2_3:35817908-35817927 Msa0289590:intron 40.0%
TCCGTTAAACTTAAGGTTGG+TGG - chr2_3:35817911-35817930 Msa0289590:intron 40.0%
CCCACCAACCTTAAGTTTAA+CGG + chr2_3:35817915-35817934 None:intergenic 40.0%
! CCGTTAAACTTAAGGTTGGT+GGG - chr2_3:35817912-35817931 Msa0289590:intron 40.0%
!! CGTTAAACTTAAGGTTGGTG+GGG - chr2_3:35817913-35817932 Msa0289590:intron 40.0%
!! TGATAATGGTGCTGGTACTA+TGG - chr2_3:35818111-35818130 Msa0289590:intron 40.0%
GAACTGTTTGCAACATTCAG+TGG - chr2_3:35818133-35818152 Msa0289590:intron 40.0%
GGTGAGTAGCTTACAATTTC+TGG - chr2_3:35818526-35818545 Msa0289590:intron 40.0%
ATAATACCCCTTTGTCGAGT+TGG - chr2_3:35818799-35818818 Msa0289590:intron 40.0%
! TGATTAGCCAACTCGACAAA+GGG + chr2_3:35818809-35818828 None:intergenic 40.0%
! TTGATTAGCCAACTCGACAA+AGG + chr2_3:35818810-35818829 None:intergenic 40.0%
!! ATTTGATTTGGTGGCATCTG+AGG - chr2_3:35819041-35819060 Msa0289590:intron 40.0%
TGTAGAGAAAGAAGGAAGAG+GGG + chr2_3:35819204-35819223 None:intergenic 40.0%
CTCTTAATCACTACCTGTAG+TGG + chr2_3:35819278-35819297 None:intergenic 40.0%
!! ACAACCGATGGTTTGGTTAT+TGG - chr2_3:35819422-35819441 Msa0289590:intron 40.0%
CAAAGCAGTGGTACAATGAT+TGG + chr2_3:35819902-35819921 None:intergenic 40.0%
CAGCTTAGTGAAGTCTATCT+AGG - chr2_3:35820274-35820293 Msa0289590:intron 40.0%
TTGTAACCTGTACGAGATCA+AGG - chr2_3:35820426-35820445 Msa0289590:intron 40.0%
TGTAACCTGTACGAGATCAA+GGG - chr2_3:35820427-35820446 Msa0289590:intron 40.0%
CCTCCGGTTCCATTCAATAT+CGG - chr2_3:35815107-35815126 Msa0289590:three_prime_UTR 45.0%
AACACATCGCTGGAACAAAG+AGG + chr2_3:35815244-35815263 None:intergenic 45.0%
!! AGAGTGAAAGGTAGTGGGAT+TGG + chr2_3:35815922-35815941 None:intergenic 45.0%
!! GCTTTAGGGTTCTTGACTCA+TGG - chr2_3:35816377-35816396 Msa0289590:three_prime_UTR 45.0%
CGACACATGGAGCTAATCAT+TGG - chr2_3:35816424-35816443 Msa0289590:three_prime_UTR 45.0%
TCAATGACATCCAATGCTCG+AGG + chr2_3:35816610-35816629 None:intergenic 45.0%
CTTTCTGCACAGTGATAAGC+AGG + chr2_3:35816678-35816697 None:intergenic 45.0%
GGCATTGCAAGATTTCCAAC+AGG - chr2_3:35816732-35816751 Msa0289590:three_prime_UTR 45.0%
! TGGTGTGCTGGCCAATTAAA+AGG + chr2_3:35816998-35817017 None:intergenic 45.0%
TTACGGAAAACATGGTGTGC+TGG + chr2_3:35817010-35817029 None:intergenic 45.0%
AATGTTGACATGTGTGCGGT+CGG - chr2_3:35817063-35817082 Msa0289590:three_prime_UTR 45.0%
! AGCACTGAAATTGTGCATCG+TGG - chr2_3:35817373-35817392 Msa0289590:three_prime_UTR 45.0%
CAACTCAAAAGGTGGTCTCA+AGG - chr2_3:35817526-35817545 Msa0289590:three_prime_UTR 45.0%
AAAAGGTGGTCTCAAGGACA+AGG - chr2_3:35817532-35817551 Msa0289590:three_prime_UTR 45.0%
GAATATGCAGTTGAAACCGG+AGG - chr2_3:35817838-35817857 Msa0289590:intron 45.0%
AAACCTGCCTTTACCTTCAC+TGG + chr2_3:35817884-35817903 None:intergenic 45.0%
TTGTCCATCCAGTAGTACGA+TGG + chr2_3:35818557-35818576 None:intergenic 45.0%
! GATTAGCCAACTCGACAAAG+GGG + chr2_3:35818808-35818827 None:intergenic 45.0%
TCTCATCAGTTTAGGCAGTC+TGG - chr2_3:35818879-35818898 Msa0289590:intron 45.0%
ATCAGTTTAGGCAGTCTGGA+TGG - chr2_3:35818883-35818902 Msa0289590:intron 45.0%
GAGCATTTGAGGGTAAAGCT+TGG - chr2_3:35819004-35819023 Msa0289590:intron 45.0%
ATTAGGAGAGATGAGGATGC+AGG + chr2_3:35819181-35819200 None:intergenic 45.0%
GAAAGAAGGAAGAGGGGATT+AGG + chr2_3:35819198-35819217 None:intergenic 45.0%
GATGAGCTTAGTTCCACTAC+AGG - chr2_3:35819262-35819281 Msa0289590:intron 45.0%
CTAAGTATGCTGACAACCGA+TGG - chr2_3:35819410-35819429 Msa0289590:intron 45.0%
TATGCTGACAACCGATGGTT+TGG - chr2_3:35819415-35819434 Msa0289590:intron 45.0%
TGGAACCCAAAATGGTGTCT+TGG - chr2_3:35820333-35820352 Msa0289590:intron 45.0%
GTGTCTTGGCATTAAAGGCT+GGG - chr2_3:35820347-35820366 Msa0289590:intron 45.0%
TGTCTTGGCATTAAAGGCTG+GGG - chr2_3:35820348-35820367 Msa0289590:intron 45.0%
!! CGCAGTAGTGGTTCTGTTTT+GGG - chr2_3:35820384-35820403 Msa0289590:intron 45.0%
!! TAGTGGTTCTGTTTTGGGCT+GGG - chr2_3:35820389-35820408 Msa0289590:intron 45.0%
AAACTCCCTTGATCTCGTAC+AGG + chr2_3:35820435-35820454 None:intergenic 45.0%
TATGGTTGCGGTTCTGTCAT+AGG - chr2_3:35820471-35820490 Msa0289590:CDS 45.0%
!! TTTTGTTATCAGCTGCCTGC+TGG - chr2_3:35820511-35820530 Msa0289590:CDS 45.0%
TCCCACTGTTCAGTTTCCTC+CGG - chr2_3:35815091-35815110 Msa0289590:three_prime_UTR 50.0%
ACCGGAGGAAACTGAACAGT+GGG + chr2_3:35815095-35815114 None:intergenic 50.0%
AACCGGAGGAAACTGAACAG+TGG + chr2_3:35815096-35815115 None:intergenic 50.0%
CCGATATTGAATGGAACCGG+AGG + chr2_3:35815110-35815129 None:intergenic 50.0%
TCGCTGGAACAAAGAGGAGA+AGG + chr2_3:35815238-35815257 None:intergenic 50.0%
TAGGGGCTACGACTGTATCA+AGG - chr2_3:35816321-35816340 Msa0289590:three_prime_UTR 50.0%
TAGCAATGGCAACCGACACA+TGG - chr2_3:35816411-35816430 Msa0289590:three_prime_UTR 50.0%
ACCGCGTTCATGCCATAACT+CGG - chr2_3:35816576-35816595 Msa0289590:three_prime_UTR 50.0%
ACCGAGTTATGGCATGAACG+CGG + chr2_3:35816580-35816599 None:intergenic 50.0%
GAGGTCTCTGTACCGAGTTA+TGG + chr2_3:35816591-35816610 None:intergenic 50.0%
ATGTTGACATGTGTGCGGTC+GGG - chr2_3:35817064-35817083 Msa0289590:three_prime_UTR 50.0%
TTGCCAGTGAAGGTAAAGGC+AGG - chr2_3:35817878-35817897 Msa0289590:intron 50.0%
!! TGGTGCTACCATCGTACTAC+TGG - chr2_3:35818546-35818565 Msa0289590:intron 50.0%
GCTACCATCGTACTACTGGA+TGG - chr2_3:35818550-35818569 Msa0289590:intron 50.0%
! AGGATGCAGGAAGTACACAG+AGG + chr2_3:35819168-35819187 None:intergenic 50.0%
AGAGGGGATTAGGAGAGATG+AGG + chr2_3:35819188-35819207 None:intergenic 50.0%
ACAAGCACAACAGCAGAGGT+TGG - chr2_3:35819299-35819318 Msa0289590:intron 50.0%
CAACAGCAGAGGTTGGACAA+AGG - chr2_3:35819306-35819325 Msa0289590:intron 50.0%
GGTGTCTTGGCATTAAAGGC+TGG - chr2_3:35820346-35820365 Msa0289590:intron 50.0%
!! AAAGGCTGGGGAGTATCTTC+TGG - chr2_3:35820360-35820379 Msa0289590:intron 50.0%
!! AAGGCTGGGGAGTATCTTCT+GGG - chr2_3:35820361-35820380 Msa0289590:intron 50.0%
!! GCGCAGTAGTGGTTCTGTTT+TGG - chr2_3:35820383-35820402 Msa0289590:intron 50.0%
!! GTAGTGGTTCTGTTTTGGGC+TGG - chr2_3:35820388-35820407 Msa0289590:intron 50.0%
!! AGTGGTTCTGTTTTGGGCTG+GGG - chr2_3:35820390-35820409 Msa0289590:intron 50.0%
TTGTTGCACTGCTGCTGCTA+TGG - chr2_3:35820453-35820472 Msa0289590:CDS 50.0%
! TTATCAGCTGCCTGCTGGTT+CGG - chr2_3:35820516-35820535 Msa0289590:CDS 50.0%
GGCATTCTCAGCATCCTGTG+CGG - chr2_3:35815128-35815147 Msa0289590:three_prime_UTR 55.0%
TCCTCGTCGTCGTTGTTCCA+AGG - chr2_3:35815157-35815176 Msa0289590:three_prime_UTR 55.0%
ACCTTGGAACAACGACGACG+AGG + chr2_3:35815161-35815180 None:intergenic 55.0%
GGTACAGAGACCTCGAGCAT+TGG - chr2_3:35816597-35816616 Msa0289590:three_prime_UTR 55.0%
TGTTGACATGTGTGCGGTCG+GGG - chr2_3:35817065-35817084 Msa0289590:three_prime_UTR 55.0%
GAGCACAAGCACAACAGCAG+AGG - chr2_3:35819295-35819314 Msa0289590:intron 55.0%
CAGCAGAGGTTGGACAAAGG+TGG - chr2_3:35819309-35819328 Msa0289590:intron 55.0%
GTATCTTCTGGGCGCAGTAG+TGG - chr2_3:35820372-35820391 Msa0289590:intron 55.0%
!! GTGGTTCTGTTTTGGGCTGG+GGG - chr2_3:35820391-35820410 Msa0289590:intron 55.0%
!! TGGTTCTGTTTTGGGCTGGG+GGG - chr2_3:35820392-35820411 Msa0289590:intron 55.0%
CACTGCTGCTGCTATGGTTG+CGG - chr2_3:35820459-35820478 Msa0289590:CDS 55.0%
CGGTTCTGTCATAGGCTGCT+GGG - chr2_3:35820479-35820498 Msa0289590:CDS 55.0%
TTCTGTCATAGGCTGCTGGG+AGG - chr2_3:35820482-35820501 Msa0289590:CDS 55.0%
TCTCAGCATCCTGTGCGGCT+CGG - chr2_3:35815133-35815152 Msa0289590:three_prime_UTR 60.0%
GCGGTTCTGTCATAGGCTGC+TGG - chr2_3:35820478-35820497 Msa0289590:CDS 60.0%
GACGAGGAACCGAGCCGCAC+AGG + chr2_3:35815145-35815164 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 35815079 35820542 35815079 ID=Msa0289590;Name=Msa0289590
chr2_3 mRNA 35815079 35820542 35815079 ID=Msa0289590-mRNA-1;Parent=Msa0289590;Name=Msa0289590-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.75|0.8|1|0.5|0.4|5|1623|132
chr2_3 exon 35815079 35815344 35815079 ID=Msa0289590-mRNA-1:exon:11757;Parent=Msa0289590-mRNA-1
chr2_3 exon 35816078 35816128 35816078 ID=Msa0289590-mRNA-1:exon:11756;Parent=Msa0289590-mRNA-1
chr2_3 exon 35816294 35817799 35816294 ID=Msa0289590-mRNA-1:exon:11755;Parent=Msa0289590-mRNA-1
chr2_3 exon 35818347 35818445 35818347 ID=Msa0289590-mRNA-1:exon:11754;Parent=Msa0289590-mRNA-1
chr2_3 exon 35820443 35820542 35820443 ID=Msa0289590-mRNA-1:exon:11753;Parent=Msa0289590-mRNA-1
chr2_3 CDS 35820443 35820542 35820443 ID=Msa0289590-mRNA-1:cds;Parent=Msa0289590-mRNA-1
chr2_3 CDS 35818347 35818445 35818347 ID=Msa0289590-mRNA-1:cds;Parent=Msa0289590-mRNA-1
chr2_3 CDS 35817600 35817799 35817600 ID=Msa0289590-mRNA-1:cds;Parent=Msa0289590-mRNA-1
chr2_3 three_prime_UTR 35816294 35817599 35816294 ID=Msa0289590-mRNA-1:three_prime_utr;Parent=Msa0289590-mRNA-1
chr2_3 three_prime_UTR 35816078 35816128 35816078 ID=Msa0289590-mRNA-1:three_prime_utr;Parent=Msa0289590-mRNA-1
chr2_3 three_prime_UTR 35815079 35815344 35815079 ID=Msa0289590-mRNA-1:three_prime_utr;Parent=Msa0289590-mRNA-1
Gene Sequence

>Msa0289590

TATGAGATTGCTTCCCACTGTTCAGTTTCCTCCGGTTCCATTCAATATCGGCATTCTCAGCATCCTGTGCGGCTCGGTTCCTCGTCGTCGTTGTTCCAAGATTGCTTCTCAGATATGCATATTCTGGATTTGAATGCTACAAAACCGTTGAGAGAAACAAGGTTGAAATGGATGAACTTTGTTTCTGGTATCAATACTGGTGATGTAAAGTTGAAGAATATGCAGTTGAAACCGGAGGCTCTAAATGCTTTAAAATTGCCAGTGAAGGTAAAGGCAGGTTTTCTTGGATCCGTTAAACTTAAGGTTGGTGGGGCCCATATTAACTACTGTTCTTACCCTCTAAAACAATTTCTGTCTACCAAAGTTGTTCGTAAGCTTCATTCTCCTATGATTTCTTAG
Protein sequence

>Msa0289590

YEIASHCSVSSGSIQYRHSQHPVRLGSSSSLFQDCFSDMHILDLNATKPLRETRLKWMNFVSGINTGDVKLKNMQLKPEALNALKLPVKVKAGFLGSVKLKVGGAHINYCSYPLKQFLSTKVVRKLHSPMIS*