Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0294110 | XP_003596346.1 | 62.634 | 372 | 80 | 6 | 414 | 730 | 4 | 371 | 7.00e-146 | 441 |
Msa0294110 | XP_003596346.1 | 85.613 | 424 | 8 | 2 | 1 | 424 | 1 | 371 | 0.0 | 736 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0294110 | sp|Q93VI8|TLP7_ARATH | 62.645 | 431 | 102 | 4 | 1 | 424 | 1 | 379 | 1.81e-179 | 520 |
Msa0294110 | sp|Q93VI8|TLP7_ARATH | 56.598 | 341 | 87 | 5 | 448 | 730 | 42 | 379 | 6.55e-115 | 354 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0294110 | Q2HSA0 | 62.634 | 372 | 80 | 6 | 414 | 730 | 4 | 371 | 3.34e-146 | 441 |
Msa0294110 | Q2HSA0 | 85.613 | 424 | 8 | 2 | 1 | 424 | 1 | 371 | 0.0 | 736 |
Gene ID | Type | Classification |
---|---|---|
Msa0294110 | TF | TUB |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0294110 | Msa0332700 | 0.835693 | 1.446784e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0294110 | MtrunA17_Chr2g0315641 | 85.613 | 424 | 8 | 2 | 1 | 424 | 1 | 371 | 0.0 | 736 |
Msa0294110 | MtrunA17_Chr2g0315641 | 62.634 | 372 | 80 | 6 | 414 | 730 | 4 | 371 | 6.44e-150 | 441 |
Msa0294110 | MtrunA17_Chr2g0315651 | 79.775 | 356 | 22 | 1 | 425 | 730 | 12 | 367 | 0.0 | 573 |
Msa0294110 | MtrunA17_Chr2g0315651 | 66.118 | 425 | 82 | 6 | 4 | 424 | 1 | 367 | 0.0 | 540 |
Msa0294110 | MtrunA17_Chr2g0286441 | 43.880 | 433 | 160 | 7 | 20 | 424 | 16 | 393 | 7.74e-115 | 352 |
Msa0294110 | MtrunA17_Chr2g0286441 | 41.944 | 360 | 125 | 9 | 450 | 730 | 39 | 393 | 1.38e-73 | 244 |
Msa0294110 | MtrunA17_Chr8g0373001 | 44.630 | 419 | 150 | 4 | 36 | 424 | 46 | 412 | 1.45e-113 | 349 |
Msa0294110 | MtrunA17_Chr8g0373001 | 39.096 | 376 | 142 | 9 | 438 | 730 | 41 | 412 | 1.05e-64 | 221 |
Msa0294110 | MtrunA17_Chr5g0404321 | 43.705 | 421 | 153 | 4 | 36 | 424 | 48 | 416 | 1.30e-112 | 347 |
Msa0294110 | MtrunA17_Chr5g0404321 | 40.984 | 366 | 127 | 12 | 450 | 730 | 55 | 416 | 3.26e-69 | 233 |
Msa0294110 | MtrunA17_Chr1g0201891 | 43.519 | 432 | 141 | 7 | 43 | 424 | 53 | 431 | 1.37e-108 | 337 |
Msa0294110 | MtrunA17_Chr1g0201891 | 37.984 | 387 | 126 | 10 | 450 | 730 | 53 | 431 | 3.21e-66 | 225 |
Msa0294110 | MtrunA17_Chr1g0155301 | 45.185 | 405 | 147 | 8 | 43 | 424 | 70 | 422 | 3.03e-108 | 335 |
Msa0294110 | MtrunA17_Chr1g0155301 | 40.449 | 356 | 134 | 13 | 450 | 730 | 70 | 422 | 1.68e-64 | 220 |
Msa0294110 | MtrunA17_Chr2g0278511 | 42.000 | 450 | 152 | 10 | 30 | 424 | 32 | 427 | 7.44e-105 | 327 |
Msa0294110 | MtrunA17_Chr2g0278511 | 37.995 | 379 | 132 | 12 | 450 | 730 | 54 | 427 | 2.47e-63 | 217 |
Msa0294110 | MtrunA17_Chr1g0196071 | 44.039 | 411 | 143 | 7 | 43 | 424 | 50 | 402 | 3.81e-103 | 322 |
Msa0294110 | MtrunA17_Chr1g0196071 | 40.833 | 360 | 127 | 10 | 450 | 730 | 50 | 402 | 1.55e-67 | 228 |
Msa0294110 | MtrunA17_Chr8g0373361 | 35.577 | 416 | 173 | 10 | 36 | 417 | 51 | 405 | 4.47e-66 | 224 |
Msa0294110 | MtrunA17_Chr8g0373361 | 30.811 | 370 | 162 | 11 | 438 | 723 | 46 | 405 | 6.47e-35 | 137 |
Msa0294110 | MtrunA17_Chr1g0156151 | 37.745 | 204 | 79 | 2 | 58 | 261 | 66 | 221 | 9.62e-36 | 134 |
Msa0294110 | MtrunA17_Chr8g0373341 | 31.633 | 392 | 129 | 8 | 42 | 414 | 49 | 320 | 1.42e-34 | 134 |
Msa0294110 | MtrunA17_Chr8g0373341 | 33.022 | 321 | 117 | 11 | 449 | 720 | 49 | 320 | 1.13e-24 | 105 |
Msa0294110 | MtrunA17_Chr8g0373331 | 42.439 | 205 | 94 | 9 | 233 | 417 | 148 | 348 | 1.93e-32 | 129 |
Msa0294110 | MtrunA17_Chr8g0373331 | 35.032 | 314 | 171 | 12 | 438 | 723 | 40 | 348 | 7.30e-32 | 127 |
Msa0294110 | MtrunA17_Chr8g0373331 | 52.475 | 101 | 48 | 0 | 36 | 136 | 45 | 145 | 1.78e-27 | 114 |
Msa0294110 | MtrunA17_Chr8g0373351 | 39.109 | 202 | 107 | 7 | 227 | 416 | 89 | 286 | 1.52e-28 | 116 |
Msa0294110 | MtrunA17_Chr8g0373351 | 44.697 | 132 | 64 | 4 | 596 | 722 | 159 | 286 | 1.95e-18 | 86.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0294110 | AT1G53320.1 | 62.645 | 431 | 102 | 4 | 1 | 424 | 1 | 379 | 1.84e-180 | 520 |
Msa0294110 | AT1G53320.1 | 56.598 | 341 | 87 | 5 | 448 | 730 | 42 | 379 | 6.66e-116 | 354 |
Msa0294110 | AT2G47900.3 | 43.382 | 408 | 153 | 5 | 43 | 424 | 52 | 407 | 8.26e-111 | 342 |
Msa0294110 | AT2G47900.3 | 38.227 | 361 | 138 | 7 | 450 | 730 | 52 | 407 | 2.56e-71 | 238 |
Msa0294110 | AT2G47900.2 | 42.892 | 408 | 154 | 5 | 43 | 424 | 52 | 406 | 9.31e-109 | 337 |
Msa0294110 | AT2G47900.2 | 38.333 | 360 | 138 | 7 | 450 | 730 | 52 | 406 | 1.82e-71 | 239 |
Msa0294110 | AT2G47900.1 | 42.892 | 408 | 154 | 5 | 43 | 424 | 52 | 406 | 9.31e-109 | 337 |
Msa0294110 | AT2G47900.1 | 38.333 | 360 | 138 | 7 | 450 | 730 | 52 | 406 | 1.82e-71 | 239 |
Msa0294110 | AT2G18280.2 | 44.140 | 401 | 150 | 5 | 43 | 424 | 48 | 393 | 8.39e-106 | 328 |
Msa0294110 | AT2G18280.2 | 39.542 | 349 | 140 | 7 | 450 | 730 | 48 | 393 | 1.83e-66 | 225 |
Msa0294110 | AT2G18280.1 | 44.140 | 401 | 150 | 5 | 43 | 424 | 48 | 393 | 8.39e-106 | 328 |
Msa0294110 | AT2G18280.1 | 39.542 | 349 | 140 | 7 | 450 | 730 | 48 | 393 | 1.83e-66 | 225 |
Msa0294110 | AT1G76900.2 | 40.789 | 456 | 143 | 8 | 41 | 424 | 55 | 455 | 2.69e-105 | 329 |
Msa0294110 | AT1G76900.2 | 34.158 | 404 | 142 | 10 | 448 | 730 | 55 | 455 | 5.30e-58 | 204 |
Msa0294110 | AT1G76900.1 | 40.789 | 456 | 143 | 8 | 41 | 424 | 55 | 455 | 2.69e-105 | 329 |
Msa0294110 | AT1G76900.1 | 34.158 | 404 | 142 | 10 | 448 | 730 | 55 | 455 | 5.30e-58 | 204 |
Msa0294110 | AT1G76900.3 | 40.789 | 456 | 143 | 8 | 41 | 424 | 55 | 455 | 2.69e-105 | 329 |
Msa0294110 | AT1G76900.3 | 34.158 | 404 | 142 | 10 | 448 | 730 | 55 | 455 | 5.30e-58 | 204 |
Msa0294110 | AT1G25280.1 | 42.727 | 440 | 141 | 9 | 43 | 424 | 59 | 445 | 1.58e-103 | 325 |
Msa0294110 | AT1G25280.1 | 38.107 | 391 | 128 | 12 | 450 | 730 | 59 | 445 | 5.26e-63 | 217 |
Msa0294110 | AT1G47270.3 | 41.889 | 413 | 155 | 9 | 36 | 424 | 37 | 388 | 1.84e-98 | 309 |
Msa0294110 | AT1G47270.3 | 37.394 | 353 | 141 | 11 | 450 | 730 | 44 | 388 | 1.94e-55 | 195 |
Msa0294110 | AT1G47270.2 | 41.889 | 413 | 155 | 9 | 36 | 424 | 61 | 412 | 3.35e-98 | 309 |
Msa0294110 | AT1G47270.2 | 37.394 | 353 | 141 | 11 | 450 | 730 | 68 | 412 | 2.93e-55 | 195 |
Msa0294110 | AT1G47270.1 | 41.889 | 413 | 155 | 9 | 36 | 424 | 62 | 413 | 3.49e-98 | 309 |
Msa0294110 | AT1G47270.1 | 37.394 | 353 | 141 | 11 | 450 | 730 | 69 | 413 | 3.19e-55 | 195 |
Msa0294110 | AT3G06380.1 | 40.855 | 421 | 161 | 8 | 31 | 424 | 21 | 380 | 2.70e-95 | 301 |
Msa0294110 | AT3G06380.1 | 38.674 | 362 | 139 | 10 | 444 | 730 | 27 | 380 | 3.43e-62 | 213 |
Msa0294110 | AT1G43640.1 | 40.603 | 431 | 155 | 7 | 41 | 424 | 53 | 429 | 8.53e-95 | 301 |
Msa0294110 | AT1G43640.1 | 36.031 | 383 | 139 | 11 | 448 | 730 | 53 | 429 | 2.41e-56 | 199 |
Msa0294110 | AT1G43640.2 | 41.866 | 418 | 140 | 8 | 55 | 424 | 1 | 363 | 3.99e-94 | 297 |
Msa0294110 | AT1G43640.2 | 36.043 | 369 | 130 | 11 | 462 | 730 | 1 | 363 | 7.22e-53 | 187 |
Msa0294110 | AT5G18680.1 | 42.222 | 405 | 157 | 8 | 43 | 424 | 39 | 389 | 6.08e-93 | 295 |
Msa0294110 | AT5G18680.1 | 36.997 | 373 | 144 | 11 | 438 | 730 | 28 | 389 | 9.10e-57 | 199 |
Msa0294110 | AT5G18680.2 | 41.691 | 343 | 124 | 7 | 104 | 424 | 9 | 297 | 3.48e-73 | 239 |
Msa0294110 | AT5G18680.2 | 42.105 | 266 | 115 | 8 | 494 | 730 | 42 | 297 | 1.51e-49 | 176 |
Msa0294110 | AT3G06380.2 | 40.000 | 345 | 120 | 7 | 106 | 424 | 5 | 288 | 5.19e-71 | 234 |
Msa0294110 | AT3G06380.2 | 43.346 | 263 | 117 | 8 | 492 | 730 | 34 | 288 | 1.80e-53 | 186 |
Msa0294110 | AT1G25280.3 | 46.642 | 268 | 85 | 7 | 214 | 424 | 1 | 267 | 3.26e-68 | 225 |
Msa0294110 | AT1G25280.3 | 41.328 | 271 | 96 | 10 | 519 | 730 | 1 | 267 | 4.02e-47 | 168 |
Msa0294110 | AT1G25280.2 | 46.642 | 268 | 85 | 7 | 214 | 424 | 1 | 267 | 3.26e-68 | 225 |
Msa0294110 | AT1G25280.2 | 41.328 | 271 | 96 | 10 | 519 | 730 | 1 | 267 | 4.02e-47 | 168 |
Msa0294110 | AT1G61940.2 | 47.126 | 87 | 46 | 0 | 46 | 132 | 1 | 87 | 8.65e-22 | 96.3 |
Msa0294110 | AT1G61940.1 | 47.541 | 61 | 32 | 0 | 46 | 106 | 1 | 61 | 4.42e-13 | 70.1 |
Find 201 sgRNAs with CRISPR-Local
Find 561 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACGATGGTTTGGCACCATTA+TGG | 0.220136 | 2_3:-45710664 | None:intergenic |
CTTCACAGCTCGGACTTTCT+TGG | 0.231255 | 2_3:+45710608 | Msa0294110:intron |
ATCATTCGCCTTGGACGTTT+TGG | 0.253223 | 2_3:-45714949 | None:intergenic |
GCAGCCCTTGTCCGCCTTCC+AGG | 0.253322 | 2_3:+45711126 | Msa0294110:CDS |
GCGATATAACATACTCAGTA+TGG | 0.267086 | 2_3:-45709709 | None:intergenic |
CTTTCCCTCCCGGTTGGCTT+TGG | 0.300866 | 2_3:-45711036 | None:intergenic |
ATGATATCCGCAAGAAGTTC+TGG | 0.302123 | 2_3:-45713170 | None:intergenic |
CTTCAAAAGGTTGAACTTGT+AGG | 0.307145 | 2_3:-45710768 | None:intergenic |
GCCATTTGCTTAACTAGCTT+TGG | 0.307225 | 2_3:+45715321 | Msa0294110:CDS |
CGATGGTTTGGCACCATTAT+GGG | 0.310618 | 2_3:-45710663 | None:intergenic |
AAAGAGGGGCAGGGGAATAA+AGG | 0.311308 | 2_3:-45709611 | None:intergenic |
GTTTAGTACCAAAGCTAGTT+AGG | 0.325857 | 2_3:-45711162 | None:intergenic |
GCCATTTGCCTAACTAGCTT+TGG | 0.333355 | 2_3:+45711154 | Msa0294110:CDS |
CGGCTTGTTCTGTCACTTGT+TGG | 0.336212 | 2_3:-45714835 | None:intergenic |
TGTTCTGTCACTTGTTGGTT+TGG | 0.343539 | 2_3:-45714830 | None:intergenic |
TGGCACCATTATGGGGTGGC+TGG | 0.351579 | 2_3:-45710655 | None:intergenic |
GATATCTTCTAGCTGCTAAT+AGG | 0.354984 | 2_3:-45714435 | None:intergenic |
GGCAAAACGCCGGCTAGCTC+TGG | 0.355300 | 2_3:-45710690 | None:intergenic |
TTGAGGGCTTATCTGTTTGC+TGG | 0.356555 | 2_3:-45710711 | None:intergenic |
AGGCGCCGGCGCCGGTGAAT+CGG | 0.359512 | 2_3:+45706784 | Msa0294110:CDS |
ACTGACTGCAAGCCTGTATC+AGG | 0.363573 | 2_3:-45709105 | None:intergenic |
CACCGGCGCCGGCGCCTCTC+CGG | 0.366254 | 2_3:-45706778 | None:intergenic |
TCGCCAGCATTCACAGATAA+AGG | 0.367850 | 2_3:+45709647 | Msa0294110:CDS |
CTTGTTGGTTTGGCACCAGC+CGG | 0.374243 | 2_3:-45714820 | None:intergenic |
TCTTCATCTCCTCTCCCTCC+TGG | 0.374907 | 2_3:-45715213 | None:intergenic |
GCTATCTGAACTTTCGCATA+TGG | 0.381471 | 2_3:-45714998 | None:intergenic |
AACTAGCTTTGGTACTAAAC+TGG | 0.385771 | 2_3:+45711165 | Msa0294110:CDS |
CAAATTCTCGAAATCCTTCA+AGG | 0.391328 | 2_3:+45706724 | Msa0294110:CDS |
ATCTTACTGACAAGCCAGTT+TGG | 0.393584 | 2_3:-45715346 | None:intergenic |
TCGCCAGCATTAACAGATAC+AGG | 0.396379 | 2_3:+45714406 | Msa0294110:intron |
AACAGTACTTACATGATGTA+AGG | 0.402699 | 2_3:-45708030 | None:intergenic |
TGCTGGTGCTTGAACTTTCA+TGG | 0.404252 | 2_3:+45710962 | Msa0294110:CDS |
TCTTCATCTCCTTTCCCTCC+CGG | 0.407140 | 2_3:-45711046 | None:intergenic |
TATTAGCAGCTAGAAGATAT+AGG | 0.409814 | 2_3:+45709678 | Msa0294110:CDS |
GAAACGGTTCTCCTCCAGTT+TGG | 0.411512 | 2_3:+45711067 | Msa0294110:CDS |
AACTAGCTTTGGCACCAAAC+TGG | 0.411927 | 2_3:+45715332 | Msa0294110:CDS |
CGTCCCCTACTTTACCAAAC+TGG | 0.415882 | 2_3:-45711081 | None:intergenic |
TACTGTGGACCAAAGCCAAC+CGG | 0.423752 | 2_3:+45711027 | Msa0294110:CDS |
GCAGAACAGGAAAGAGGGGC+AGG | 0.423894 | 2_3:-45709621 | None:intergenic |
TTGGCCCTCTCGACTTCAAA+AGG | 0.424052 | 2_3:-45710781 | None:intergenic |
CAAAGCCAACCAGGAGGGAG+AGG | 0.425267 | 2_3:+45715204 | Msa0294110:CDS |
AAAGTTTCCTGTCTCATCAA+TGG | 0.435431 | 2_3:+45710823 | Msa0294110:CDS |
GATAGATTGAACTTCCTTGA+AGG | 0.441232 | 2_3:-45706738 | None:intergenic |
AAAATTGCTGATCCTGATAC+AGG | 0.441684 | 2_3:+45709093 | Msa0294110:CDS |
AGCTCTGGCACACGATGGTT+TGG | 0.442139 | 2_3:-45710675 | None:intergenic |
ATACCTTCACCATGGACTAT+AGG | 0.445930 | 2_3:+45711104 | Msa0294110:CDS |
TCCTCCAGTTTGGTAAAGTA+GGG | 0.446113 | 2_3:+45711077 | Msa0294110:CDS |
CAAAGCCAACCGGGAGGGAA+AGG | 0.450993 | 2_3:+45711037 | Msa0294110:CDS |
CTTGTGCCTGCGTGTGTAAA+CGG | 0.451934 | 2_3:+45706912 | Msa0294110:CDS |
CTGTCATATCCTTTCTCTCA+TGG | 0.452722 | 2_3:-45715140 | None:intergenic |
CTCCTCCAGTTTGGTAAAGT+AGG | 0.453347 | 2_3:+45711076 | Msa0294110:CDS |
ATGCTGGCGATGAGCAGAAC+AGG | 0.461702 | 2_3:-45709634 | None:intergenic |
GACCGGAGAGGCGCCGGCGC+CGG | 0.462410 | 2_3:+45706776 | Msa0294110:CDS |
GGCATGAGCATTTGCAATGC+TGG | 0.463812 | 2_3:+45710945 | Msa0294110:CDS |
CTTGAACTTCCATGAGAGAA+AGG | 0.465557 | 2_3:+45715131 | Msa0294110:CDS |
TCCGATGTGGAACGAGCAAT+TGG | 0.466061 | 2_3:+45715098 | Msa0294110:CDS |
AAACGCCTGGAAGGCGGACA+AGG | 0.466204 | 2_3:-45711131 | None:intergenic |
GCCTCTCCGGTCATCGGAGA+CGG | 0.467162 | 2_3:-45706765 | None:intergenic |
TCCGTCCTCCGATGCACTAT+CGG | 0.467168 | 2_3:-45713126 | None:intergenic |
TCCGCTTTATAAGACAATGA+TGG | 0.469186 | 2_3:-45707973 | None:intergenic |
ATTATCTCTGCAAGGAGATC+CGG | 0.469997 | 2_3:-45706836 | None:intergenic |
ATCCGCCGATTCACCGGCGC+CGG | 0.470123 | 2_3:-45706789 | None:intergenic |
AGAACAGGAAAGAGGGGCAG+GGG | 0.471192 | 2_3:-45709619 | None:intergenic |
CCTGCTGGTAACGTCGAGGC+AGG | 0.472577 | 2_3:+45714892 | Msa0294110:CDS |
CAAGGAAGTAATGCTTATGT+TGG | 0.475540 | 2_3:+45714511 | Msa0294110:CDS |
TCCGATGACCGGAGAGGCGC+CGG | 0.477140 | 2_3:+45706770 | Msa0294110:CDS |
AAACGCATGGAAGGCAGATA+AGG | 0.478629 | 2_3:-45715298 | None:intergenic |
GACAGCCAGCCACCCCATAA+TGG | 0.478762 | 2_3:+45710650 | Msa0294110:CDS |
CATCTCCTCTCCCTCCTGGT+TGG | 0.480773 | 2_3:-45715209 | None:intergenic |
ACCAAAGCTAGTTAGGCAAA+TGG | 0.480991 | 2_3:-45711155 | None:intergenic |
AAGTTTCCTGTCTCATCAAT+GGG | 0.481200 | 2_3:+45710824 | Msa0294110:CDS |
CCGCTTTATAAGACAATGAT+GGG | 0.481752 | 2_3:-45707972 | None:intergenic |
CATCTCCTTTCCCTCCCGGT+TGG | 0.483246 | 2_3:-45711042 | None:intergenic |
TTGTTGGTTTGGCACCAGCC+GGG | 0.486862 | 2_3:-45714819 | None:intergenic |
AGTGAGCACATCATCCTCCT+TGG | 0.487846 | 2_3:-45710800 | None:intergenic |
TATTAGCAGCTAGAAGATAT+CGG | 0.489255 | 2_3:+45714437 | Msa0294110:CDS |
CTTGTGCCTGCGTTTGCAAA+CGG | 0.489375 | 2_3:+45713246 | Msa0294110:CDS |
ACAATTTATGATGCCCCGGC+TGG | 0.489537 | 2_3:+45714805 | Msa0294110:CDS |
TGCTGGTAACTTCGAGGCAG+GGG | 0.489666 | 2_3:+45710739 | Msa0294110:CDS |
CGTTACCAGCAGGAACTTGA+GGG | 0.494917 | 2_3:-45714882 | None:intergenic |
AACGCATGGAAGGCAGATAA+GGG | 0.500964 | 2_3:-45715297 | None:intergenic |
TTAGGCAAATGGCAAACGCC+TGG | 0.502545 | 2_3:-45711144 | None:intergenic |
TTTCCTTTATCTGTGAATGC+TGG | 0.503242 | 2_3:-45709650 | None:intergenic |
CTTTCACCCATTGATGAGAC+AGG | 0.505376 | 2_3:-45710830 | None:intergenic |
CAAGGAAGTAATGCTTATGT+TGG | 0.506103 | 2_3:+45709752 | Msa0294110:CDS |
GCCAAAGCTAGTTAAGCAAA+TGG | 0.506693 | 2_3:-45715322 | None:intergenic |
ATGATGTAAGGGCGAGATAG+AGG | 0.507033 | 2_3:-45708018 | None:intergenic |
ACGGTGTGGCCACTGTTCCT+CGG | 0.508536 | 2_3:-45706876 | None:intergenic |
AGTTCCATCCGCCGATTCAC+CGG | 0.510161 | 2_3:-45706795 | None:intergenic |
CTTTCAGCTGGTTGCTACTG+TGG | 0.512635 | 2_3:+45711012 | Msa0294110:CDS |
TGTTGGTTTGGCACCAGCCG+GGG | 0.513154 | 2_3:-45714818 | None:intergenic |
GCCGGCGCCTCTCCGGTCAT+CGG | 0.514544 | 2_3:-45706771 | None:intergenic |
CAGAACAGGAAAGAGGGGCA+GGG | 0.516488 | 2_3:-45709620 | None:intergenic |
CCTGCTGGTAACTTCGAGGC+AGG | 0.517968 | 2_3:+45710737 | Msa0294110:CDS |
AGAGAGCAAATCATTCGCCT+TGG | 0.519881 | 2_3:-45714958 | None:intergenic |
ATCAGTGAAGAACTTTCAGC+TGG | 0.522886 | 2_3:+45711000 | Msa0294110:CDS |
TGCAAATGCTCATGCCACCT+TGG | 0.523848 | 2_3:-45710938 | None:intergenic |
CCCATCATTGTCTTATAAAG+CGG | 0.524392 | 2_3:+45707972 | Msa0294110:CDS |
TGGGGAAGATCACGTGGTCC+TGG | 0.524705 | 2_3:-45707953 | None:intergenic |
CAGATACTTCAACAATGCTC+AGG | 0.525873 | 2_3:+45713076 | Msa0294110:intron |
ATCAGTGAAGAACTTTCAGC+TGG | 0.527624 | 2_3:+45715167 | Msa0294110:CDS |
AAGTTACCAGCAGGAACTTG+AGG | 0.529054 | 2_3:-45710728 | None:intergenic |
ATGCTTATGTTGGCAAGCTA+AGG | 0.535171 | 2_3:+45709762 | Msa0294110:CDS |
ATGCTTATGTTGGCAAGCTA+AGG | 0.535171 | 2_3:+45714521 | Msa0294110:CDS |
TACAGAGAGAAAGAGAAAGA+AGG | 0.538695 | 2_3:-45706605 | None:intergenic |
CGCCGGCGCCGGTGAATCGG+CGG | 0.539043 | 2_3:+45706787 | Msa0294110:CDS |
CATCGTGTGCCAGAGCTAGC+CGG | 0.539800 | 2_3:+45710681 | Msa0294110:CDS |
ACGTTACCAGCAGGAACTTG+AGG | 0.541472 | 2_3:-45714883 | None:intergenic |
CGCAAGAAGTTCTGGAAGCA+TGG | 0.545732 | 2_3:-45713162 | None:intergenic |
CTTTCAGCTGGTTGCCACTG+TGG | 0.546288 | 2_3:+45715179 | Msa0294110:CDS |
ATAAGCCCTCAAGTTCCTGC+TGG | 0.547760 | 2_3:+45710722 | Msa0294110:CDS |
ATAAGCCCTCAAGTTCCTGC+TGG | 0.547760 | 2_3:+45714877 | Msa0294110:CDS |
TGAACTTTCGCATATGGATG+AGG | 0.550314 | 2_3:-45714992 | None:intergenic |
CATCGGAGGACGGAACAGAT+TGG | 0.551175 | 2_3:+45713135 | Msa0294110:CDS |
AGTTACCAGCAGGAACTTGA+GGG | 0.551679 | 2_3:-45710727 | None:intergenic |
CTTCACAATTTATGATGCCC+CGG | 0.551703 | 2_3:+45714801 | Msa0294110:CDS |
CTGCTGGTAACTTCGAGGCA+GGG | 0.552365 | 2_3:+45710738 | Msa0294110:CDS |
TTAACGAAAGAGTGTGTGAA+AGG | 0.553515 | 2_3:-45706582 | None:intergenic |
ACTACACATGTCGTTAATGA+AGG | 0.555255 | 2_3:+45706688 | Msa0294110:exon |
CTTTCGCATATGGATGAGGC+AGG | 0.555383 | 2_3:-45714988 | None:intergenic |
ACTATCGGTGGTGTCATCTC+CGG | 0.555795 | 2_3:-45713111 | None:intergenic |
CGATGAGCAGAACAGGAAAG+AGG | 0.556463 | 2_3:-45709627 | None:intergenic |
AGGACCTGTTTAAGACAAGA+AGG | 0.556474 | 2_3:-45706995 | None:intergenic |
GATGGTTTGGCACCATTATG+GGG | 0.557500 | 2_3:-45710662 | None:intergenic |
AATCGGCGGATGGAACTGAT+TGG | 0.560005 | 2_3:+45706801 | Msa0294110:CDS |
GGCGCCGGTGAATCGGCGGA+TGG | 0.567807 | 2_3:+45706791 | Msa0294110:CDS |
GGCGAGATAGAGGTAAAATG+TGG | 0.568448 | 2_3:-45708008 | None:intergenic |
TGATTGGTCGACCATGCTAC+CGG | 0.570589 | 2_3:+45706817 | Msa0294110:CDS |
GCTGTCGTAAATTGTGAAGT+TGG | 0.573043 | 2_3:-45710633 | None:intergenic |
GATGAGCAGAACAGGAAAGA+GGG | 0.573241 | 2_3:-45709626 | None:intergenic |
ACTTCCTTGTGAAAAGTCAT+CGG | 0.574248 | 2_3:-45714497 | None:intergenic |
TTTATTCTTCAAGATTGTGT+AGG | 0.575970 | 2_3:-45715073 | None:intergenic |
GGAACGAGCAATTGGAGTGC+TGG | 0.578985 | 2_3:+45715106 | Msa0294110:CDS |
GCAAATGGCAAACGCATGGA+AGG | 0.579450 | 2_3:-45715307 | None:intergenic |
TCGACACCGTCTCCGATGAC+CGG | 0.580542 | 2_3:+45706759 | Msa0294110:CDS |
CAAGGGCTGCCTATAGTCCA+TGG | 0.582759 | 2_3:-45711113 | None:intergenic |
TGCAAGGAGATCCGGTAGCA+TGG | 0.583668 | 2_3:-45706828 | None:intergenic |
ACCGATAGTGCATCGGAGGA+CGG | 0.583942 | 2_3:+45713125 | Msa0294110:CDS |
CCTGCCTCGACGTTACCAGC+AGG | 0.584116 | 2_3:-45714892 | None:intergenic |
AGGGAAAGGAGATGAAGAAA+CGG | 0.585294 | 2_3:+45711051 | Msa0294110:CDS |
CGCCAGCATTAACAGATACA+GGG | 0.585383 | 2_3:+45714407 | Msa0294110:intron |
AACGCCTGGAAGGCGGACAA+GGG | 0.585668 | 2_3:-45711130 | None:intergenic |
CGAAAGAGTGTGTGAAAGGG+TGG | 0.591334 | 2_3:-45706578 | None:intergenic |
TCTGTTTGCTGGCAAAACGC+CGG | 0.592503 | 2_3:-45710700 | None:intergenic |
ACTGTGGATCAAAGCCAACC+AGG | 0.595544 | 2_3:+45715195 | Msa0294110:CDS |
TTAAGCAAATGGCAAACGCA+TGG | 0.595995 | 2_3:-45715311 | None:intergenic |
TCGACGTCGCCGAGGAACAG+TGG | 0.597224 | 2_3:+45706867 | Msa0294110:CDS |
AGTTCCTGCTGGTAACTTCG+AGG | 0.598795 | 2_3:+45710733 | Msa0294110:CDS |
GCTCAGGCTCTCAATGCTAC+CGG | 0.598992 | 2_3:+45713092 | Msa0294110:CDS |
GCAAATGGCAAACGCCTGGA+AGG | 0.600612 | 2_3:-45711140 | None:intergenic |
TAACGAAAGAGTGTGTGAAA+GGG | 0.600675 | 2_3:-45706581 | None:intergenic |
TCTGTTTGCTTGCAAAACGC+CGG | 0.603910 | 2_3:-45714855 | None:intergenic |
ACAGTACTTACATGATGTAA+GGG | 0.604759 | 2_3:-45708029 | None:intergenic |
CCTGCCTCGAAGTTACCAGC+AGG | 0.604926 | 2_3:-45710737 | None:intergenic |
ATTAAACGAGTTGATGTCAC+GGG | 0.605426 | 2_3:+45713191 | Msa0294110:CDS |
TAAAAGAGTCGACGTCGCCG+AGG | 0.606773 | 2_3:+45706859 | Msa0294110:CDS |
TAAGGGCTGTCTATAGTACA+TGG | 0.607232 | 2_3:-45715280 | None:intergenic |
ATGAGCAGAACAGGAAAGAG+GGG | 0.608172 | 2_3:-45709625 | None:intergenic |
GTGCCTGCGTTTGCAAACGG+TGG | 0.610120 | 2_3:+45713249 | Msa0294110:CDS |
CGATATAACATACTCAGTAT+GGG | 0.610140 | 2_3:-45709708 | None:intergenic |
CATTAAACGAGTTGATGTCA+CGG | 0.617052 | 2_3:+45713190 | Msa0294110:CDS |
ACTGTGGACCAAAGCCAACC+GGG | 0.622254 | 2_3:+45711028 | Msa0294110:CDS |
AATGGCAAACGCCTGGAAGG+CGG | 0.622747 | 2_3:-45711137 | None:intergenic |
CATGCTTCCAGAACTTCTTG+CGG | 0.624235 | 2_3:+45713163 | Msa0294110:CDS |
TCCAATTGCTCGTTCCACAT+CGG | 0.629514 | 2_3:-45715099 | None:intergenic |
CTGCCTATAGTCCATGGTGA+AGG | 0.631313 | 2_3:-45711107 | None:intergenic |
GAGATAGCTTATGTAGACCT+AGG | 0.635329 | 2_3:+45709064 | Msa0294110:CDS |
TGAAGAATAAAGCTCCGATG+TGG | 0.636117 | 2_3:+45715085 | Msa0294110:CDS |
CCTCCAGTTTGGTAAAGTAG+GGG | 0.636441 | 2_3:+45711078 | Msa0294110:CDS |
TGGACCAAAGCCAACCGGGA+GGG | 0.641249 | 2_3:+45711032 | Msa0294110:CDS |
TCTCCACCGTTTGCAAACGC+AGG | 0.641600 | 2_3:-45713252 | None:intergenic |
TGACACCACCGATAGTGCAT+CGG | 0.642812 | 2_3:+45713118 | Msa0294110:CDS |
CACCACCGATAGTGCATCGG+AGG | 0.644146 | 2_3:+45713121 | Msa0294110:CDS |
CTGCTGGTAACGTCGAGGCA+GGG | 0.646476 | 2_3:+45714893 | Msa0294110:CDS |
CAATGATGGGGAAGATCACG+TGG | 0.646996 | 2_3:-45707959 | None:intergenic |
TGGATCAAAGCCAACCAGGA+GGG | 0.647654 | 2_3:+45715199 | Msa0294110:CDS |
AAGAGTGTGTGAAAGGGTGG+TGG | 0.649067 | 2_3:-45706575 | None:intergenic |
CTTTCATGGTCGTGTGACAG+TGG | 0.649357 | 2_3:+45710976 | Msa0294110:CDS |
TCTTGAAGAACAAAGCTCCA+AGG | 0.652245 | 2_3:+45710921 | Msa0294110:CDS |
GTTAAGTCACCTCAACGTAA+CGG | 0.655976 | 2_3:+45706959 | Msa0294110:CDS |
CCCCTACTTTACCAAACTGG+AGG | 0.658277 | 2_3:-45711078 | None:intergenic |
CAACAAGTGACAGAACAAGC+CGG | 0.658598 | 2_3:+45714836 | Msa0294110:CDS |
GGTTTGGCACCATTATGGGG+TGG | 0.668160 | 2_3:-45710659 | None:intergenic |
GTCCTCCGATGCACTATCGG+TGG | 0.672145 | 2_3:-45713123 | None:intergenic |
CGGCTAGCTCTGGCACACGA+TGG | 0.676984 | 2_3:-45710680 | None:intergenic |
TGGTTGGCTTTGATCCACAG+TGG | 0.681134 | 2_3:-45715193 | None:intergenic |
TGAAGTCGAGAGGGCCAAGG+AGG | 0.682719 | 2_3:+45710786 | Msa0294110:CDS |
CGCTTTATAAGACAATGATG+GGG | 0.686571 | 2_3:-45707971 | None:intergenic |
GTGATTGTGCCGTTACGTTG+AGG | 0.690998 | 2_3:-45706968 | None:intergenic |
GCGACGACATTTCGACGATG+CGG | 0.691215 | 2_3:-45713224 | None:intergenic |
TTGATGTCACGGGAGAACAA+TGG | 0.692340 | 2_3:+45713201 | Msa0294110:CDS |
AGGGGACGATACCTTCACCA+TGG | 0.697116 | 2_3:+45711096 | Msa0294110:CDS |
GCAGCTAGAAGATATAGGTG+TGG | 0.701333 | 2_3:+45709683 | Msa0294110:CDS |
TGAAGAACAAAGCTCCAAGG+TGG | 0.704573 | 2_3:+45710924 | Msa0294110:CDS |
AGTTCCTGCTGGTAACGTCG+AGG | 0.707570 | 2_3:+45714888 | Msa0294110:CDS |
TCTCCACCGTTTACACACGC+AGG | 0.710172 | 2_3:-45706918 | None:intergenic |
GTGGATCAAAGCCAACCAGG+AGG | 0.710816 | 2_3:+45715198 | Msa0294110:CDS |
GATGCTGACGACTTATCACA+AGG | 0.713430 | 2_3:+45709734 | Msa0294110:CDS |
ACCGTCTCCGATGACCGGAG+AGG | 0.727856 | 2_3:+45706764 | Msa0294110:CDS |
GTGCCTGCGTGTGTAAACGG+TGG | 0.728961 | 2_3:+45706915 | Msa0294110:CDS |
GTGGACCAAAGCCAACCGGG+AGG | 0.734579 | 2_3:+45711031 | Msa0294110:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATATATTATTTTAATATT+AGG | + | chr2_3:45714049-45714068 | Msa0294110:intron | 0.0% |
!!! | CAAAAATTTCATTTTTTTTT+TGG | + | chr2_3:45707022-45707041 | Msa0294110:intron | 10.0% |
!!! | TTTTTTTTGGTTTAATTTAT+TGG | + | chr2_3:45707035-45707054 | Msa0294110:intron | 10.0% |
!! | GAAATTTCATTAATATATAA+AGG | + | chr2_3:45708691-45708710 | Msa0294110:intron | 10.0% |
!! | AATTTCATTAATATATAAAG+GGG | + | chr2_3:45708693-45708712 | Msa0294110:intron | 10.0% |
!! | AGTAAATGTATAATTAAATA+AGG | + | chr2_3:45711449-45711468 | Msa0294110:intron | 10.0% |
!! | GTAAATGTATAATTAAATAA+GGG | + | chr2_3:45711450-45711469 | Msa0294110:intron | 10.0% |
!! | TAAATGTATAATTAAATAAG+GGG | + | chr2_3:45711451-45711470 | Msa0294110:intron | 10.0% |
!!! | TTTTCCTTTAATAATTAAAT+AGG | + | chr2_3:45711487-45711506 | Msa0294110:intron | 10.0% |
!! | ATAATGATTAAAATTTCAAA+TGG | + | chr2_3:45709471-45709490 | Msa0294110:intron | 10.0% |
!!! | AGTATTGATTTTATGAATTA+GGG | - | chr2_3:45706668-45706687 | None:intergenic | 15.0% |
!!! | TAGTATTGATTTTATGAATT+AGG | - | chr2_3:45706669-45706688 | None:intergenic | 15.0% |
!!! | AAACAATGATTTTTGTTTTT+TGG | + | chr2_3:45707099-45707118 | Msa0294110:intron | 15.0% |
!! | ATTGATTATGAGATTAATTA+TGG | + | chr2_3:45707202-45707221 | Msa0294110:intron | 15.0% |
!!! | TTTTTTTTTGCCTTTTTTTA+TGG | + | chr2_3:45708064-45708083 | Msa0294110:intron | 15.0% |
!! | TATACTAATTTAGTAATTGT+AGG | + | chr2_3:45708945-45708964 | Msa0294110:intron | 15.0% |
!! | TTAACTAATTTAGTAATTGT+AGG | + | chr2_3:45709000-45709019 | Msa0294110:intron | 15.0% |
!! | ATTCACTATAGTTTAATATA+AGG | - | chr2_3:45710307-45710326 | None:intergenic | 15.0% |
!! | AAAACCATTAATTGAATTTA+TGG | + | chr2_3:45710538-45710557 | Msa0294110:intron | 15.0% |
!! | CTTTCCTATTTAATTATTAA+AGG | - | chr2_3:45711494-45711513 | None:intergenic | 15.0% |
!! | TTGAGAATAAATTCAATAAA+TGG | - | chr2_3:45714704-45714723 | None:intergenic | 15.0% |
!!! | AAAAATGAAATTTTTGTTGC+AGG | - | chr2_3:45707018-45707037 | None:intergenic | 20.0% |
!! | TTAGTTTAAATCCAGTAATA+AGG | + | chr2_3:45707452-45707471 | Msa0294110:intron | 20.0% |
!!! | TAATAAGGTGTTTGTTAAAT+GGG | + | chr2_3:45707467-45707486 | Msa0294110:intron | 20.0% |
!! | GAGATAAAATGATTTATGTT+TGG | + | chr2_3:45707597-45707616 | Msa0294110:intron | 20.0% |
!!! | ATTGATTTTGGTATTATTAG+CGG | - | chr2_3:45707752-45707771 | None:intergenic | 20.0% |
!! | AATAATACCAAAATCAATTC+TGG | + | chr2_3:45707754-45707773 | Msa0294110:intron | 20.0% |
!!! | TGATTAACATTTTCTTCAAT+TGG | + | chr2_3:45707836-45707855 | Msa0294110:intron | 20.0% |
!!! | ATTATTTTTGCATTTAAGCA+TGG | + | chr2_3:45708804-45708823 | Msa0294110:intron | 20.0% |
!!! | TACTTAATTCTATCATCTTT+TGG | + | chr2_3:45708837-45708856 | Msa0294110:intron | 20.0% |
!! | ACATTCTTATTATGTAAATC+TGG | + | chr2_3:45708918-45708937 | Msa0294110:intron | 20.0% |
!! | ATTTACTGTAAACATATGTT+TGG | + | chr2_3:45709267-45709286 | Msa0294110:intron | 20.0% |
!! | AATCAGCAATTTATAATTGT+CGG | - | chr2_3:45709534-45709553 | None:intergenic | 20.0% |
!!! | TTACATTTTCTTTGATGTTT+TGG | + | chr2_3:45709576-45709595 | Msa0294110:intron | 20.0% |
!!! | TACATTTTCTTTGATGTTTT+GGG | + | chr2_3:45709577-45709596 | Msa0294110:intron | 20.0% |
!!! | TTTTTATCCTTTTTGTTGAA+TGG | + | chr2_3:45709863-45709882 | Msa0294110:intron | 20.0% |
!!! | TTTTATTTTTCTTATGGTTG+AGG | - | chr2_3:45710086-45710105 | None:intergenic | 20.0% |
!! | CAACCATAAGAAAAATAAAA+AGG | + | chr2_3:45710086-45710105 | Msa0294110:intron | 20.0% |
!!! | GTTCCTTTTTATTTTTCTTA+TGG | - | chr2_3:45710092-45710111 | None:intergenic | 20.0% |
!!! | CTTTGATCTTAGATATTTTT+AGG | - | chr2_3:45710208-45710227 | None:intergenic | 20.0% |
!!! | CAAGAGTTTTTGTATAAATA+AGG | - | chr2_3:45710399-45710418 | None:intergenic | 20.0% |
!! | TTGACCATAAATTCAATTAA+TGG | - | chr2_3:45710545-45710564 | None:intergenic | 20.0% |
!!! | TTGTTCTTTTCTATTGTTAT+AGG | + | chr2_3:45711563-45711582 | Msa0294110:intron | 20.0% |
!!! | TGTTCTTTTCTATTGTTATA+GGG | + | chr2_3:45711564-45711583 | Msa0294110:intron | 20.0% |
!! | ATAAGCAAATAAATCTTCAA+GGG | + | chr2_3:45711712-45711731 | Msa0294110:intron | 20.0% |
!!! | ATCTTATTTACCAAAAGTTT+TGG | - | chr2_3:45712502-45712521 | None:intergenic | 20.0% |
!! | TTTAACTACCAATTTAAAGA+CGG | + | chr2_3:45712583-45712602 | Msa0294110:intron | 20.0% |
!! | TTTCTCTCTTGAATAATTTA+TGG | + | chr2_3:45713376-45713395 | Msa0294110:intron | 20.0% |
!! | TTTATGGATCATGAAAAATT+TGG | + | chr2_3:45713392-45713411 | Msa0294110:intron | 20.0% |
!! | TTTCAAATTATTAGTTGTGT+CGG | - | chr2_3:45713527-45713546 | None:intergenic | 20.0% |
!!! | ATCTTGTTATGTTTTGATAA+AGG | + | chr2_3:45713716-45713735 | Msa0294110:intron | 20.0% |
!! | TCAAACTATTAAAGAAGAAA+AGG | - | chr2_3:45713952-45713971 | None:intergenic | 20.0% |
!! | GATGCATTTATTAAGTATAT+AGG | + | chr2_3:45714024-45714043 | Msa0294110:intron | 20.0% |
!! | TTAAAATTTCAAATGGAGAT+TGG | + | chr2_3:45714308-45714327 | Msa0294110:intron | 20.0% |
!! | AAACCATTTATTGAAGAAAA+AGG | + | chr2_3:45714593-45714612 | Msa0294110:intron | 20.0% |
!! | AACCATTTATTGAAGAAAAA+GGG | + | chr2_3:45714594-45714613 | Msa0294110:intron | 20.0% |
! | ATTCAGTGTTAGTAGTAAAA+GGG | + | chr2_3:45707257-45707276 | Msa0294110:intron | 25.0% |
! | TTAGTAGTAAAAGGGTTTAT+TGG | + | chr2_3:45707265-45707284 | Msa0294110:intron | 25.0% |
!!! | TTAATTAGGTTTTTGTTGTG+AGG | + | chr2_3:45707295-45707314 | Msa0294110:intron | 25.0% |
! | AGTTGCAGTTTAATAGAATT+TGG | + | chr2_3:45707425-45707444 | Msa0294110:intron | 25.0% |
! | TTTAACAAACACCTTATTAC+TGG | - | chr2_3:45707466-45707485 | None:intergenic | 25.0% |
!! | GTAATAAGGTGTTTGTTAAA+TGG | + | chr2_3:45707466-45707485 | Msa0294110:intron | 25.0% |
! | TGTTAAATGGGTATTAGTAT+TGG | + | chr2_3:45707479-45707498 | Msa0294110:intron | 25.0% |
! | TTGAGTGTAAAAATCACATT+AGG | + | chr2_3:45707654-45707673 | Msa0294110:intron | 25.0% |
!!! | TTGATTTTGGTATTATTAGC+GGG | - | chr2_3:45707751-45707770 | None:intergenic | 25.0% |
!!! | GGAGGAATACTTTTTTTTTA+TGG | + | chr2_3:45707775-45707794 | Msa0294110:intron | 25.0% |
!! | TTAACATTTTCTTCAATTGG+TGG | + | chr2_3:45707839-45707858 | Msa0294110:intron | 25.0% |
!!! | AATGAGACATAAGTTGATTT+CGG | + | chr2_3:45707886-45707905 | Msa0294110:intron | 25.0% |
!!! | TTTTTGCCTTTTTTTATGGA+TGG | + | chr2_3:45708068-45708087 | Msa0294110:intron | 25.0% |
! | TTTCAACCATCCATAAAAAA+AGG | - | chr2_3:45708077-45708096 | None:intergenic | 25.0% |
! | TAAAAGGATATCATACAACT+CGG | - | chr2_3:45708112-45708131 | None:intergenic | 25.0% |
!! | ATATCCTTTTATCTTCCTAT+GGG | + | chr2_3:45708121-45708140 | Msa0294110:intron | 25.0% |
! | AATATATTTGTCAAACCACA+TGG | + | chr2_3:45708317-45708336 | Msa0294110:intron | 25.0% |
!! | AGCTTATCTTTTCTTATTGT+GGG | - | chr2_3:45708572-45708591 | None:intergenic | 25.0% |
!! | AAGCTTATCTTTTCTTATTG+TGG | - | chr2_3:45708573-45708592 | None:intergenic | 25.0% |
! | ACAAATCATAGTATGCATTT+AGG | - | chr2_3:45708770-45708789 | None:intergenic | 25.0% |
!! | AAATGCATACTATGATTTGT+TGG | + | chr2_3:45708770-45708789 | Msa0294110:intron | 25.0% |
! | ATGATAGAATTAAGTAACCA+TGG | - | chr2_3:45708833-45708852 | None:intergenic | 25.0% |
! | TTCTTATTATGTAAATCTGG+AGG | + | chr2_3:45708921-45708940 | Msa0294110:intron | 25.0% |
! | ATGATGATAGTTAGTACAAA+AGG | + | chr2_3:45709490-45709509 | Msa0294110:intron | 25.0% |
!!! | GAAACATTTTATTTCTTTCC+TGG | - | chr2_3:45709821-45709840 | None:intergenic | 25.0% |
! | TTAATGTAAGATACTGTCAT+TGG | + | chr2_3:45709893-45709912 | Msa0294110:intron | 25.0% |
!! | AAAGGAACTTACTCTTTTAA+AGG | + | chr2_3:45710104-45710123 | Msa0294110:intron | 25.0% |
!!! | GATTTTAAAAATCCAAAGCA+CGG | + | chr2_3:45710235-45710254 | Msa0294110:intron | 25.0% |
! | TTGTATAAATAAGGCTAAGA+GGG | - | chr2_3:45710390-45710409 | None:intergenic | 25.0% |
! | TTTGTATAAATAAGGCTAAG+AGG | - | chr2_3:45710391-45710410 | None:intergenic | 25.0% |
! | CATTATGCTTATTTATTCCT+TGG | + | chr2_3:45711213-45711232 | Msa0294110:intron | 25.0% |
! | TATTCACTTTATAACATCCA+AGG | - | chr2_3:45711233-45711252 | None:intergenic | 25.0% |
! | CTTGAAGATTTATTTGCTTA+TGG | - | chr2_3:45711713-45711732 | None:intergenic | 25.0% |
! | CATAAGCAAATAAATCTTCA+AGG | + | chr2_3:45711711-45711730 | Msa0294110:intron | 25.0% |
! | TGTAATTGATATGTAAGTAG+TGG | - | chr2_3:45711844-45711863 | None:intergenic | 25.0% |
!! | TTTTATCTTGCCAAAACTTT+TGG | + | chr2_3:45712489-45712508 | Msa0294110:intron | 25.0% |
! | AATACATTCCGTCTTTAAAT+TGG | - | chr2_3:45712594-45712613 | None:intergenic | 25.0% |
!! | AATTGAGTGATTATTGACTA+GGG | - | chr2_3:45712657-45712676 | None:intergenic | 25.0% |
!! | AAATTGAGTGATTATTGACT+AGG | - | chr2_3:45712658-45712677 | None:intergenic | 25.0% |
!! | AATAATAGTTCTATGACTTG+GGG | - | chr2_3:45712960-45712979 | None:intergenic | 25.0% |
!! | GAATAATAGTTCTATGACTT+GGG | - | chr2_3:45712961-45712980 | None:intergenic | 25.0% |
!! | AGAATAATAGTTCTATGACT+TGG | - | chr2_3:45712962-45712981 | None:intergenic | 25.0% |
!! | AATGATGGTTCTATTACTTA+GGG | - | chr2_3:45713015-45713034 | None:intergenic | 25.0% |
!! | TAATGATGGTTCTATTACTT+AGG | - | chr2_3:45713016-45713035 | None:intergenic | 25.0% |
!! | AAATGAATTCATTTTGTTGC+AGG | - | chr2_3:45713352-45713371 | None:intergenic | 25.0% |
!! | CTAACATTTTGTTCAATTAG+TGG | + | chr2_3:45713450-45713469 | Msa0294110:intron | 25.0% |
! | ATCAATTGAATTAAGAGAGT+TGG | + | chr2_3:45713684-45713703 | Msa0294110:intron | 25.0% |
!! | TACCCTTTTTCTTCAATAAA+TGG | - | chr2_3:45714599-45714618 | None:intergenic | 25.0% |
! | ATTTATTGAAGAAAAAGGGT+AGG | + | chr2_3:45714598-45714617 | Msa0294110:intron | 25.0% |
! | ACAAACTAACTAATAACATC+TGG | + | chr2_3:45714666-45714685 | Msa0294110:intron | 25.0% |
! | TTTATTCTTCAAGATTGTGT+AGG | - | chr2_3:45715076-45715095 | None:intergenic | 25.0% |
!! | CTCTTTTAATTATCTCTGCA+AGG | - | chr2_3:45706847-45706866 | None:intergenic | 30.0% |
! | TTTTCCTTCTTGTCTTAAAC+AGG | + | chr2_3:45706991-45707010 | Msa0294110:CDS | 30.0% |
GTGAAAACCTACTTTCAAAA+GGG | - | chr2_3:45707141-45707160 | None:intergenic | 30.0% | |
AGTGAAAACCTACTTTCAAA+AGG | - | chr2_3:45707142-45707161 | None:intergenic | 30.0% | |
! | TTTGAAAGTAGGTTTTCACT+TGG | + | chr2_3:45707142-45707161 | Msa0294110:intron | 30.0% |
CATTCAGTGTTAGTAGTAAA+AGG | + | chr2_3:45707256-45707275 | Msa0294110:intron | 30.0% | |
TTATTGGTGAGTGGTTAATT+AGG | + | chr2_3:45707281-45707300 | Msa0294110:intron | 30.0% | |
TGGTTAATTAGTGAGTGATT+TGG | + | chr2_3:45707323-45707342 | Msa0294110:intron | 30.0% | |
GGTTAATTAGTGAGTGATTT+GGG | + | chr2_3:45707324-45707343 | Msa0294110:intron | 30.0% | |
!!! | GTAGTTTTATGCGTTTGAAA+TGG | + | chr2_3:45707507-45707526 | Msa0294110:intron | 30.0% |
AGTGTAAAAATCACATTAGG+AGG | + | chr2_3:45707657-45707676 | Msa0294110:intron | 30.0% | |
! | CTTCAAGTTAGAATCAATTC+TGG | + | chr2_3:45707700-45707719 | Msa0294110:intron | 30.0% |
AATACCAAAATCAATTCTGG+AGG | + | chr2_3:45707757-45707776 | Msa0294110:intron | 30.0% | |
!! | TATTCCTCCAGAATTGATTT+TGG | - | chr2_3:45707764-45707783 | None:intergenic | 30.0% |
AATACAAACCAGACATTTAC+AGG | - | chr2_3:45707865-45707884 | None:intergenic | 30.0% | |
!! | ATGAGACATAAGTTGATTTC+GGG | + | chr2_3:45707887-45707906 | Msa0294110:intron | 30.0% |
ACAGTACTTACATGATGTAA+GGG | - | chr2_3:45708032-45708051 | None:intergenic | 30.0% | |
AACAGTACTTACATGATGTA+AGG | - | chr2_3:45708033-45708052 | None:intergenic | 30.0% | |
!! | ACATCATGTAAGTACTGTTT+TGG | + | chr2_3:45708034-45708053 | Msa0294110:intron | 30.0% |
! | GATATCCTTTTATCTTCCTA+TGG | + | chr2_3:45708120-45708139 | Msa0294110:intron | 30.0% |
! | TATCCTTTTATCTTCCTATG+GGG | + | chr2_3:45708122-45708141 | Msa0294110:intron | 30.0% |
GTTGATCGTATAAAGTCTAA+TGG | + | chr2_3:45708151-45708170 | Msa0294110:intron | 30.0% | |
ATGAGTAAATTGAACAAGGT+AGG | - | chr2_3:45708414-45708433 | None:intergenic | 30.0% | |
TAGGATGAGTAAATTGAACA+AGG | - | chr2_3:45708418-45708437 | None:intergenic | 30.0% | |
AAACCAAACTAGTTAGGAAT+AGG | - | chr2_3:45708437-45708456 | None:intergenic | 30.0% | |
AACACTAAACCAAACTAGTT+AGG | - | chr2_3:45708443-45708462 | None:intergenic | 30.0% | |
GGTTTAGTGTTGTGAAATAT+CGG | + | chr2_3:45708452-45708471 | Msa0294110:intron | 30.0% | |
!!! | GATATTTTAGCTTTCCGTTA+CGG | + | chr2_3:45708517-45708536 | Msa0294110:intron | 30.0% |
! | AATGTTTTCAGAGATTGAAG+TGG | + | chr2_3:45708636-45708655 | Msa0294110:intron | 30.0% |
CTACTAAGAAATATGAGATG+CGG | - | chr2_3:45708868-45708887 | None:intergenic | 30.0% | |
ACTACTACAGGAAAAGAAAA+AGG | - | chr2_3:45709153-45709172 | None:intergenic | 30.0% | |
AAAGGAATATTCACTACTAC+AGG | - | chr2_3:45709165-45709184 | None:intergenic | 30.0% | |
ATTCCTTTGTAGTAGTTATG+TGG | + | chr2_3:45709177-45709196 | Msa0294110:intron | 30.0% | |
TCCAATTCTTGAGCAATTAA+TGG | + | chr2_3:45709234-45709253 | Msa0294110:intron | 30.0% | |
TCCATTAATTGCTCAAGAAT+TGG | - | chr2_3:45709238-45709257 | None:intergenic | 30.0% | |
AAACAACTCTCTTTCAATCA+TGG | - | chr2_3:45709415-45709434 | None:intergenic | 30.0% | |
TATTAGCAGCTAGAAGATAT+AGG | + | chr2_3:45709678-45709697 | Msa0294110:CDS | 30.0% | |
CGATATAACATACTCAGTAT+GGG | - | chr2_3:45709711-45709730 | None:intergenic | 30.0% | |
ACAAAAAGTTATTTGCTTCC+AGG | + | chr2_3:45709800-45709819 | Msa0294110:intron | 30.0% | |
AGAGAATTAGAACTTTGTGT+TGG | + | chr2_3:45710015-45710034 | Msa0294110:intron | 30.0% | |
CACCAATATTATGTAGCTTT+GGG | - | chr2_3:45710349-45710368 | None:intergenic | 30.0% | |
TCACCAATATTATGTAGCTT+TGG | - | chr2_3:45710350-45710369 | None:intergenic | 30.0% | |
AAAACTCTTGATGTGTATGT+TGG | + | chr2_3:45710409-45710428 | Msa0294110:intron | 30.0% | |
ATGAATACAGATTTCAGCAT+GGG | - | chr2_3:45710462-45710481 | None:intergenic | 30.0% | |
TATGAATACAGATTTCAGCA+TGG | - | chr2_3:45710463-45710482 | None:intergenic | 30.0% | |
TTCACCACAAATTTGATTGT+AGG | + | chr2_3:45711258-45711277 | Msa0294110:intron | 30.0% | |
CTTCCATAGTCATATATTTG+TGG | + | chr2_3:45711338-45711357 | Msa0294110:intron | 30.0% | |
GTCGGAAAAAATATGAAGTT+TGG | - | chr2_3:45711653-45711672 | None:intergenic | 30.0% | |
ACTAGAAGATGATTTATCGA+AGG | - | chr2_3:45711739-45711758 | None:intergenic | 30.0% | |
! | TGTGAAGTCTGTAATTTTCT+TGG | - | chr2_3:45711762-45711781 | None:intergenic | 30.0% |
GTGTGAAATGTGATAGTTAA+CGG | - | chr2_3:45711798-45711817 | None:intergenic | 30.0% | |
AATTTGTGTTTGACTGTTTG+AGG | - | chr2_3:45711886-45711905 | None:intergenic | 30.0% | |
TTGATATAGCTGAATGTTTG+AGG | - | chr2_3:45711965-45711984 | None:intergenic | 30.0% | |
!! | TCAGTTTTGTGATTATCAGA+AGG | - | chr2_3:45712053-45712072 | None:intergenic | 30.0% |
GAGTTTATGACAAATTGAAG+CGG | + | chr2_3:45712167-45712186 | Msa0294110:intron | 30.0% | |
GAAAATGAAACCAAGTTACT+CGG | + | chr2_3:45713828-45713847 | Msa0294110:intron | 30.0% | |
TATTCCAATTTACAACACAG+TGG | - | chr2_3:45714192-45714211 | None:intergenic | 30.0% | |
TACTTACTTACATGGTGTAA+GGG | - | chr2_3:45714245-45714264 | None:intergenic | 30.0% | |
CAAAACAGTACTTACTTACA+TGG | - | chr2_3:45714253-45714272 | None:intergenic | 30.0% | |
!! | CATGTAAGTAAGTACTGTTT+TGG | + | chr2_3:45714251-45714270 | Msa0294110:intron | 30.0% |
!! | GTTTTGGCAAAAGGATTATT+TGG | + | chr2_3:45714267-45714286 | Msa0294110:intron | 30.0% |
TATTAGCAGCTAGAAGATAT+CGG | + | chr2_3:45709678-45709697 | Msa0294110:CDS | 30.0% | |
AACTAAAATGATCCTCATTC+AGG | + | chr2_3:45714564-45714583 | Msa0294110:intron | 30.0% | |
!!! | CAAAAGGCTGAATTTTTTGT+AGG | - | chr2_3:45714926-45714945 | None:intergenic | 30.0% |
!! | TTCTCCAGTTTTGTAAAGTA+GGG | + | chr2_3:45715244-45715263 | Msa0294110:CDS | 30.0% |
! | TAACGAAAGAGTGTGTGAAA+GGG | - | chr2_3:45706584-45706603 | None:intergenic | 35.0% |
! | TTAACGAAAGAGTGTGTGAA+AGG | - | chr2_3:45706585-45706604 | None:intergenic | 35.0% |
TACAGAGAGAAAGAGAAAGA+AGG | - | chr2_3:45706608-45706627 | None:intergenic | 35.0% | |
ACTACACATGTCGTTAATGA+AGG | + | chr2_3:45706688-45706707 | Msa0294110:exon | 35.0% | |
CAAATTCTCGAAATCCTTCA+AGG | + | chr2_3:45706724-45706743 | Msa0294110:CDS | 35.0% | |
GATAGATTGAACTTCCTTGA+AGG | - | chr2_3:45706741-45706760 | None:intergenic | 35.0% | |
!! | GATTAGACCCTTTTGAAAGT+AGG | + | chr2_3:45707131-45707150 | Msa0294110:intron | 35.0% |
! | TTTGCTTGTTGAAGATGCAA+TGG | + | chr2_3:45707226-45707245 | Msa0294110:intron | 35.0% |
TTGTTGAAGATGCAATGGAA+TGG | + | chr2_3:45707231-45707250 | Msa0294110:intron | 35.0% | |
TAAAAGGGTTTATTGGTGAG+TGG | + | chr2_3:45707272-45707291 | Msa0294110:intron | 35.0% | |
!! | GTTTTTGTTGTGAGGATTGT+TGG | + | chr2_3:45707303-45707322 | Msa0294110:intron | 35.0% |
GTAGTGTCTTAATTTCAGAC+TGG | + | chr2_3:45707376-45707395 | Msa0294110:intron | 35.0% | |
TGTCTTAATTTCAGACTGGT+GGG | + | chr2_3:45707380-45707399 | Msa0294110:intron | 35.0% | |
! | TGCGTTTGAAATGGAAAAGA+TGG | + | chr2_3:45707516-45707535 | Msa0294110:intron | 35.0% |
AAGATGGAAGAATAGTGTTC+AGG | + | chr2_3:45707532-45707551 | Msa0294110:intron | 35.0% | |
AGAATAGTGTTCAGGAATCA+AGG | + | chr2_3:45707540-45707559 | Msa0294110:intron | 35.0% | |
CAAGTTAGAATCAATTCTGG+AGG | + | chr2_3:45707703-45707722 | Msa0294110:intron | 35.0% | |
!! | TGAGACATAAGTTGATTTCG+GGG | + | chr2_3:45707888-45707907 | Msa0294110:intron | 35.0% |
CGCTTTATAAGACAATGATG+GGG | - | chr2_3:45707974-45707993 | None:intergenic | 35.0% | |
CCGCTTTATAAGACAATGAT+GGG | - | chr2_3:45707975-45707994 | None:intergenic | 35.0% | |
CCCATCATTGTCTTATAAAG+CGG | + | chr2_3:45707972-45707991 | Msa0294110:CDS | 35.0% | |
TCCGCTTTATAAGACAATGA+TGG | - | chr2_3:45707976-45707995 | None:intergenic | 35.0% | |
AGATCTGCAAAACATCTCAT+TGG | + | chr2_3:45708190-45708209 | Msa0294110:intron | 35.0% | |
CATCTCATTGGTCAAATGTA+TGG | + | chr2_3:45708202-45708221 | Msa0294110:intron | 35.0% | |
TGTATGGCAAACATTACTTG+TGG | + | chr2_3:45708218-45708237 | Msa0294110:intron | 35.0% | |
GTATGGCAAACATTACTTGT+GGG | + | chr2_3:45708219-45708238 | Msa0294110:intron | 35.0% | |
TATGGCAAACATTACTTGTG+GGG | + | chr2_3:45708220-45708239 | Msa0294110:intron | 35.0% | |
!! | ACAAAGAAGAGCTTTGTTGT+TGG | + | chr2_3:45708250-45708269 | Msa0294110:intron | 35.0% |
CATCCTATTCCTAACTAGTT+TGG | + | chr2_3:45708431-45708450 | Msa0294110:intron | 35.0% | |
! | CATTTTGAGCCACCATAAAA+CGG | - | chr2_3:45708494-45708513 | None:intergenic | 35.0% |
TTTATGGTGGCTCAAAATGA+TGG | + | chr2_3:45708495-45708514 | Msa0294110:intron | 35.0% | |
! | GTCGATTGATAACACTAGTT+TGG | + | chr2_3:45708543-45708562 | Msa0294110:intron | 35.0% |
! | TTTTCAGAGATTGAAGTGGA+AGG | + | chr2_3:45708640-45708659 | Msa0294110:intron | 35.0% |
! | TCAGCAATTTTTCTAGACCT+AGG | - | chr2_3:45709084-45709103 | None:intergenic | 35.0% |
AAAATTGCTGATCCTGATAC+AGG | + | chr2_3:45709093-45709112 | Msa0294110:CDS | 35.0% | |
CAACCACATAACTACTACAA+AGG | - | chr2_3:45709183-45709202 | None:intergenic | 35.0% | |
GTTTGTAACTGTGTGATTTG+TGG | + | chr2_3:45709431-45709450 | Msa0294110:intron | 35.0% | |
TTTCCTTTATCTGTGAATGC+TGG | - | chr2_3:45709653-45709672 | None:intergenic | 35.0% | |
GCGATATAACATACTCAGTA+TGG | - | chr2_3:45709712-45709731 | None:intergenic | 35.0% | |
CAAGGAAGTAATGCTTATGT+TGG | + | chr2_3:45709752-45709771 | Msa0294110:CDS | 35.0% | |
! | ATCCTTTTTGTTGAATGGCA+TGG | + | chr2_3:45709868-45709887 | Msa0294110:intron | 35.0% |
TAATTCTCTGTTTCCTACCA+AGG | - | chr2_3:45710004-45710023 | None:intergenic | 35.0% | |
!! | TATGTAGCTTTGGGTGTAAA+TGG | - | chr2_3:45710340-45710359 | None:intergenic | 35.0% |
CACCCAAAGCTACATAATAT+TGG | + | chr2_3:45710344-45710363 | Msa0294110:intron | 35.0% | |
GTATTCATAGCTCATTAGCT+TGG | + | chr2_3:45710474-45710493 | Msa0294110:intron | 35.0% | |
TGAAGACAATTCAGCAACTA+TGG | - | chr2_3:45710593-45710612 | None:intergenic | 35.0% | |
CTTCAAAAGGTTGAACTTGT+AGG | - | chr2_3:45710771-45710790 | None:intergenic | 35.0% | |
AAAGTTTCCTGTCTCATCAA+TGG | + | chr2_3:45710823-45710842 | Msa0294110:CDS | 35.0% | |
AAGTTTCCTGTCTCATCAAT+GGG | + | chr2_3:45710824-45710843 | Msa0294110:CDS | 35.0% | |
! | TCAGATAGCAAGTCTTTTGA+TGG | + | chr2_3:45710854-45710873 | Msa0294110:CDS | 35.0% |
GTTTAGTACCAAAGCTAGTT+AGG | - | chr2_3:45711165-45711184 | None:intergenic | 35.0% | |
!! | AACTAGCTTTGGTACTAAAC+TGG | + | chr2_3:45711165-45711184 | Msa0294110:CDS | 35.0% |
GCTTCCTACAATCAAATTTG+TGG | - | chr2_3:45711265-45711284 | None:intergenic | 35.0% | |
GGACCACAAATATATGACTA+TGG | - | chr2_3:45711344-45711363 | None:intergenic | 35.0% | |
!!! | TATAGGGAGCATTTTATCCA+TGG | + | chr2_3:45711580-45711599 | Msa0294110:intron | 35.0% |
CGAATATGTGTAAACGAAGA+TGG | - | chr2_3:45711620-45711639 | None:intergenic | 35.0% | |
GGTAAGACTGATGAATTTGT+CGG | - | chr2_3:45711671-45711690 | None:intergenic | 35.0% | |
! | CAACTATCTGGTTCAAGTAA+GGG | + | chr2_3:45712017-45712036 | Msa0294110:intron | 35.0% |
CTTTACTCTTTCGTAAACGT+TGG | + | chr2_3:45712712-45712731 | Msa0294110:intron | 35.0% | |
!! | TCGTAAACGTTGGTTCAATT+TGG | + | chr2_3:45712722-45712741 | Msa0294110:intron | 35.0% |
!! | GAGTGTGTTGTTTCTACATT+GGG | - | chr2_3:45712886-45712905 | None:intergenic | 35.0% |
!! | AGAGTGTGTTGTTTCTACAT+TGG | - | chr2_3:45712887-45712906 | None:intergenic | 35.0% |
CATCGAGACATGTATAATGA+TGG | - | chr2_3:45713030-45713049 | None:intergenic | 35.0% | |
!! | CATTAAACGAGTTGATGTCA+CGG | + | chr2_3:45713190-45713209 | Msa0294110:CDS | 35.0% |
!! | ATTAAACGAGTTGATGTCAC+GGG | + | chr2_3:45713191-45713210 | Msa0294110:CDS | 35.0% |
! | GTGATTTTTCCGTTAAGAGA+AGG | - | chr2_3:45713305-45713324 | None:intergenic | 35.0% |
TTTCCCTTCTTGTCTTAAAC+AGG | + | chr2_3:45713325-45713344 | Msa0294110:intron | 35.0% | |
CTATCTATGAAGCATGGATA+CGG | + | chr2_3:45713473-45713492 | Msa0294110:intron | 35.0% | |
AAAATCACGAGTTAACTCGT+AGG | + | chr2_3:45713744-45713763 | Msa0294110:intron | 35.0% | |
ACTCGTAGGATCATATGTTT+AGG | + | chr2_3:45713758-45713777 | Msa0294110:intron | 35.0% | |
TCTACGAGTTAATTTCACGT+AGG | + | chr2_3:45714086-45714105 | Msa0294110:intron | 35.0% | |
AAGATAGAGGTAAAATGTGG+AGG | - | chr2_3:45714221-45714240 | None:intergenic | 35.0% | |
GTACTTACTTACATGGTGTA+AGG | - | chr2_3:45714246-45714265 | None:intergenic | 35.0% | |
!!! | GTAAGTACTGTTTTGGCAAA+AGG | + | chr2_3:45714258-45714277 | Msa0294110:intron | 35.0% |
! | GATATCTTCTAGCTGCTAAT+AGG | - | chr2_3:45714438-45714457 | None:intergenic | 35.0% |
ACTTCCTTGTGAAAAGTCAT+CGG | - | chr2_3:45714500-45714519 | None:intergenic | 35.0% | |
CAAGGAAGTAATGCTTATGT+TGG | + | chr2_3:45709752-45709771 | Msa0294110:CDS | 35.0% | |
! | TGGTTTTTCTTTCCTGAATG+AGG | - | chr2_3:45714579-45714598 | None:intergenic | 35.0% |
TATTGAAGAAAAAGGGTAGG+AGG | + | chr2_3:45714601-45714620 | Msa0294110:intron | 35.0% | |
TTAATATTCACCCCTTTGTC+CGG | - | chr2_3:45714642-45714661 | None:intergenic | 35.0% | |
! | CAACAATCTTTTGCTTTGTC+TGG | + | chr2_3:45714721-45714740 | Msa0294110:intron | 35.0% |
!!! | TTGGACGTTTTGGTTTCAAA+AGG | - | chr2_3:45714942-45714961 | None:intergenic | 35.0% |
!!! | TTTTGAAACCAAAACGTCCA+AGG | + | chr2_3:45714941-45714960 | Msa0294110:CDS | 35.0% |
!! | CTTCTCCAGTTTTGTAAAGT+AGG | + | chr2_3:45715243-45715262 | Msa0294110:CDS | 35.0% |
!! | TCTCCAGTTTTGTAAAGTAG+GGG | + | chr2_3:45715245-45715264 | Msa0294110:CDS | 35.0% |
ATTATCTCTGCAAGGAGATC+CGG | - | chr2_3:45706839-45706858 | None:intergenic | 40.0% | |
GTTAAGTCACCTCAACGTAA+CGG | + | chr2_3:45706959-45706978 | Msa0294110:CDS | 40.0% | |
! | AGGACCTGTTTAAGACAAGA+AGG | - | chr2_3:45706998-45707017 | None:intergenic | 40.0% |
TGGGATATTTGCATGAGCAA+TGG | + | chr2_3:45707343-45707362 | Msa0294110:intron | 40.0% | |
CATGAGCAATGGAAGCTATT+TGG | + | chr2_3:45707354-45707373 | Msa0294110:intron | 40.0% | |
GTGTCTTAATTTCAGACTGG+TGG | + | chr2_3:45707379-45707398 | Msa0294110:intron | 40.0% | |
!! | ACTGGTGGGTTAATACTGTT+TGG | + | chr2_3:45707394-45707413 | Msa0294110:intron | 40.0% |
!! | CTGGTGGGTTAATACTGTTT+GGG | + | chr2_3:45707395-45707414 | Msa0294110:intron | 40.0% |
!! | GAGACATAAGTTGATTTCGG+GGG | + | chr2_3:45707889-45707908 | Msa0294110:intron | 40.0% |
!! | ATAAGTTGATTTCGGGGGTT+TGG | + | chr2_3:45707894-45707913 | Msa0294110:intron | 40.0% |
!!! | TGTTTTGATGACTTACAGCC+AGG | + | chr2_3:45707935-45707954 | Msa0294110:intron | 40.0% |
GTACCCCATAGGAAGATAAA+AGG | - | chr2_3:45708128-45708147 | None:intergenic | 40.0% | |
!! | TTGGAGTATTGGACTAAGTC+TGG | - | chr2_3:45708361-45708380 | None:intergenic | 40.0% |
AGCAAGTCATCTTGGAGTAT+TGG | - | chr2_3:45708372-45708391 | None:intergenic | 40.0% | |
TTGACTGAAGCAAGTCATCT+TGG | - | chr2_3:45708380-45708399 | None:intergenic | 40.0% | |
! | GACTTGCTTCAGTCAATGTA+TGG | + | chr2_3:45708384-45708403 | Msa0294110:intron | 40.0% |
TATCAATCGACGAACCGTAA+CGG | - | chr2_3:45708534-45708553 | None:intergenic | 40.0% | |
TAAAGGGGAGATTTCATGAG+TGG | + | chr2_3:45708708-45708727 | Msa0294110:intron | 40.0% | |
GAGATAGCTTATGTAGACCT+AGG | + | chr2_3:45709064-45709083 | Msa0294110:CDS | 40.0% | |
GTAGTTATGTGGTTGTCACA+TGG | + | chr2_3:45709188-45709207 | Msa0294110:intron | 40.0% | |
ATGCTTATGTTGGCAAGCTA+AGG | + | chr2_3:45709762-45709781 | Msa0294110:CDS | 40.0% | |
TCTTACGTGTTTCTTCTGCT+TGG | + | chr2_3:45709839-45709858 | Msa0294110:intron | 40.0% | |
CACCATGCCATTCAACAAAA+AGG | - | chr2_3:45709873-45709892 | None:intergenic | 40.0% | |
! | AACTTTGTGTTGGCACAATC+AGG | + | chr2_3:45710025-45710044 | Msa0294110:intron | 40.0% |
! | ACTTTGTGTTGGCACAATCA+GGG | + | chr2_3:45710026-45710045 | Msa0294110:intron | 40.0% |
ATGTTGGTCAACAAAGTTGC+TGG | + | chr2_3:45710425-45710444 | Msa0294110:intron | 40.0% | |
GCTGTCGTAAATTGTGAAGT+TGG | - | chr2_3:45710636-45710655 | None:intergenic | 40.0% | |
!!! | TTCAACCTTTTGAAGTCGAG+AGG | + | chr2_3:45710776-45710795 | Msa0294110:CDS | 40.0% |
!!! | TCAACCTTTTGAAGTCGAGA+GGG | + | chr2_3:45710777-45710796 | Msa0294110:CDS | 40.0% |
TCTTGAAGAACAAAGCTCCA+AGG | + | chr2_3:45710921-45710940 | Msa0294110:CDS | 40.0% | |
ATCAGTGAAGAACTTTCAGC+TGG | + | chr2_3:45711000-45711019 | Msa0294110:CDS | 40.0% | |
AGGGAAAGGAGATGAAGAAA+CGG | + | chr2_3:45711051-45711070 | Msa0294110:CDS | 40.0% | |
TCCTCCAGTTTGGTAAAGTA+GGG | + | chr2_3:45711077-45711096 | Msa0294110:CDS | 40.0% | |
! | ATACCTTCACCATGGACTAT+AGG | + | chr2_3:45711104-45711123 | Msa0294110:CDS | 40.0% |
ACCAAAGCTAGTTAGGCAAA+TGG | - | chr2_3:45711158-45711177 | None:intergenic | 40.0% | |
TGTGTAAACGAAGATGGTGT+TGG | - | chr2_3:45711614-45711633 | None:intergenic | 40.0% | |
!! | TTGCTTATGGTGCTGATGTT+GGG | - | chr2_3:45711700-45711719 | None:intergenic | 40.0% |
!! | TTTGCTTATGGTGCTGATGT+TGG | - | chr2_3:45711701-45711720 | None:intergenic | 40.0% |
! | GTGGTGTCTTTGTCTAAGAT+TGG | - | chr2_3:45711825-45711844 | None:intergenic | 40.0% |
GTGTTGCAACTGTTGAAAGA+TGG | - | chr2_3:45711939-45711958 | None:intergenic | 40.0% | |
GATAGTTGCGACGTTTATTG+AGG | - | chr2_3:45712005-45712024 | None:intergenic | 40.0% | |
CAATAAACGTCGCAACTATC+TGG | + | chr2_3:45712005-45712024 | Msa0294110:intron | 40.0% | |
! | GCAACTATCTGGTTCAAGTA+AGG | + | chr2_3:45712016-45712035 | Msa0294110:intron | 40.0% |
TTGTGGTACACTTCAATGTG+CGG | - | chr2_3:45712122-45712141 | None:intergenic | 40.0% | |
ACTCGTTTCACTTCAATGTG+CGG | - | chr2_3:45712151-45712170 | None:intergenic | 40.0% | |
!! | CAATGTTTGGTCAAGTTGGT+GGG | - | chr2_3:45712778-45712797 | None:intergenic | 40.0% |
!! | GTGTGGTTGGAAAAGTGTTA+GGG | - | chr2_3:45712804-45712823 | None:intergenic | 40.0% |
!! | AGTGTGGTTGGAAAAGTGTT+AGG | - | chr2_3:45712805-45712824 | None:intergenic | 40.0% |
ATTGTGAGGTTAGCAAAGTG+TGG | - | chr2_3:45712821-45712840 | None:intergenic | 40.0% | |
CAGATACTTCAACAATGCTC+AGG | + | chr2_3:45713076-45713095 | Msa0294110:intron | 40.0% | |
ATGATATCCGCAAGAAGTTC+TGG | - | chr2_3:45713173-45713192 | None:intergenic | 40.0% | |
! | GGACCTGTTTAAGACAAGAA+GGG | - | chr2_3:45706997-45707016 | None:intergenic | 40.0% |
! | AGGACCTGTTTAAGACAAGA+AGG | - | chr2_3:45706998-45707017 | None:intergenic | 40.0% |
TAGTGGCTATCTATGAAGCA+TGG | + | chr2_3:45713467-45713486 | Msa0294110:intron | 40.0% | |
TATGAAGCACAAACACACCT+CGG | - | chr2_3:45713635-45713654 | None:intergenic | 40.0% | |
!!! | ACTCTCGATTTTGACTACCT+TGG | + | chr2_3:45714127-45714146 | Msa0294110:intron | 40.0% |
CAATTTACAACACAGTGGTG+GGG | - | chr2_3:45714187-45714206 | None:intergenic | 40.0% | |
CCAATTTACAACACAGTGGT+GGG | - | chr2_3:45714188-45714207 | None:intergenic | 40.0% | |
TCCAATTTACAACACAGTGG+TGG | - | chr2_3:45714189-45714208 | None:intergenic | 40.0% | |
GGCAAGATAGAGGTAAAATG+TGG | - | chr2_3:45714224-45714243 | None:intergenic | 40.0% | |
TTCCCTGTATCTGTTAATGC+TGG | - | chr2_3:45714412-45714431 | None:intergenic | 40.0% | |
ATGCTTATGTTGGCAAGCTA+AGG | + | chr2_3:45709762-45709781 | Msa0294110:CDS | 40.0% | |
TTTGTCCGGGTTTAAACTCA+AGG | - | chr2_3:45714628-45714647 | None:intergenic | 40.0% | |
TTGAGTTTAAACCCGGACAA+AGG | + | chr2_3:45714627-45714646 | Msa0294110:intron | 40.0% | |
TGAGTTTAAACCCGGACAAA+GGG | + | chr2_3:45714628-45714647 | Msa0294110:intron | 40.0% | |
TAATATTCACCCCTTTGTCC+GGG | - | chr2_3:45714641-45714660 | None:intergenic | 40.0% | |
CTTCACAATTTATGATGCCC+CGG | + | chr2_3:45714801-45714820 | Msa0294110:CDS | 40.0% | |
! | TGTTCTGTCACTTGTTGGTT+TGG | - | chr2_3:45714833-45714852 | None:intergenic | 40.0% |
TGAACTTTCGCATATGGATG+AGG | - | chr2_3:45714995-45715014 | None:intergenic | 40.0% | |
GCTATCTGAACTTTCGCATA+TGG | - | chr2_3:45715001-45715020 | None:intergenic | 40.0% | |
TGAAGAATAAAGCTCCGATG+TGG | + | chr2_3:45715085-45715104 | Msa0294110:CDS | 40.0% | |
CTTGAACTTCCATGAGAGAA+AGG | + | chr2_3:45715131-45715150 | Msa0294110:CDS | 40.0% | |
CTGTCATATCCTTTCTCTCA+TGG | - | chr2_3:45715143-45715162 | None:intergenic | 40.0% | |
ATCAGTGAAGAACTTTCAGC+TGG | + | chr2_3:45711000-45711019 | Msa0294110:CDS | 40.0% | |
!! | CTCCAGTTTTGTAAAGTAGG+GGG | + | chr2_3:45715246-45715265 | Msa0294110:CDS | 40.0% |
TAAGGGCTGTCTATAGTACA+TGG | - | chr2_3:45715283-45715302 | None:intergenic | 40.0% | |
TTAAGCAAATGGCAAACGCA+TGG | - | chr2_3:45715314-45715333 | None:intergenic | 40.0% | |
! | GCCATTTGCTTAACTAGCTT+TGG | + | chr2_3:45715321-45715340 | Msa0294110:CDS | 40.0% |
GCCAAAGCTAGTTAAGCAAA+TGG | - | chr2_3:45715325-45715344 | None:intergenic | 40.0% | |
TTGGTTACATTCACGATCGC+AGG | + | chr2_3:45707616-45707635 | Msa0294110:intron | 45.0% | |
! | ATTGGTGGCCTGTAAATGTC+TGG | + | chr2_3:45707854-45707873 | Msa0294110:intron | 45.0% |
GGCGAGATAGAGGTAAAATG+TGG | - | chr2_3:45708011-45708030 | None:intergenic | 45.0% | |
ATGATGTAAGGGCGAGATAG+AGG | - | chr2_3:45708021-45708040 | None:intergenic | 45.0% | |
CGATCAACAATGTACCCCAT+AGG | - | chr2_3:45708139-45708158 | None:intergenic | 45.0% | |
! | ACTGACTGGTTAGAACCATG+TGG | - | chr2_3:45708335-45708354 | None:intergenic | 45.0% |
ACTAAGTCTGGTCAACTGAC+TGG | - | chr2_3:45708349-45708368 | None:intergenic | 45.0% | |
GTGTTGTGAAATATCGGCCA+TGG | + | chr2_3:45708458-45708477 | Msa0294110:intron | 45.0% | |
TTGTGAAATATCGGCCATGG+TGG | + | chr2_3:45708461-45708480 | Msa0294110:intron | 45.0% | |
GGAGATTTCATGAGTGGCTA+AGG | + | chr2_3:45708714-45708733 | Msa0294110:intron | 45.0% | |
GCATTTAAGCATGGTGTCCA+TGG | + | chr2_3:45708813-45708832 | Msa0294110:intron | 45.0% | |
ATGAGCAGAACAGGAAAGAG+GGG | - | chr2_3:45709628-45709647 | None:intergenic | 45.0% | |
GATGAGCAGAACAGGAAAGA+GGG | - | chr2_3:45709629-45709648 | None:intergenic | 45.0% | |
TCGCCAGCATTCACAGATAA+AGG | + | chr2_3:45709647-45709666 | Msa0294110:CDS | 45.0% | |
GCAGCTAGAAGATATAGGTG+TGG | + | chr2_3:45709683-45709702 | Msa0294110:CDS | 45.0% | |
GATGCTGACGACTTATCACA+AGG | + | chr2_3:45709734-45709753 | Msa0294110:CDS | 45.0% | |
TTTCTCTGTTGTGATCGCCT+TGG | + | chr2_3:45709984-45710003 | Msa0294110:intron | 45.0% | |
! | TGAAAACCTTCGCTTGTTGC+AGG | + | chr2_3:45710139-45710158 | Msa0294110:intron | 45.0% |
! | GAAAACCTTCGCTTGTTGCA+GGG | + | chr2_3:45710140-45710159 | Msa0294110:intron | 45.0% |
! | AAAACCTTCGCTTGTTGCAG+GGG | + | chr2_3:45710141-45710160 | Msa0294110:intron | 45.0% |
!! | GTAGCTTTGGGTGTAAATGG+AGG | - | chr2_3:45710337-45710356 | None:intergenic | 45.0% |
AGCAACTATGGTCAGTACTC+AGG | - | chr2_3:45710581-45710600 | None:intergenic | 45.0% | |
GCTGAATTGTCTTCACAGCT+CGG | + | chr2_3:45710598-45710617 | Msa0294110:intron | 45.0% | |
! | GATGGTTTGGCACCATTATG+GGG | - | chr2_3:45710665-45710684 | None:intergenic | 45.0% |
! | CGATGGTTTGGCACCATTAT+GGG | - | chr2_3:45710666-45710685 | None:intergenic | 45.0% |
! | ACGATGGTTTGGCACCATTA+TGG | - | chr2_3:45710667-45710686 | None:intergenic | 45.0% |
TTGAGGGCTTATCTGTTTGC+TGG | - | chr2_3:45710714-45710733 | None:intergenic | 45.0% | |
AGTTACCAGCAGGAACTTGA+GGG | - | chr2_3:45710730-45710749 | None:intergenic | 45.0% | |
AAGTTACCAGCAGGAACTTG+AGG | - | chr2_3:45710731-45710750 | None:intergenic | 45.0% | |
CTTTCACCCATTGATGAGAC+AGG | - | chr2_3:45710833-45710852 | None:intergenic | 45.0% | |
TGAAGAACAAAGCTCCAAGG+TGG | + | chr2_3:45710924-45710943 | Msa0294110:CDS | 45.0% | |
TGCTGGTGCTTGAACTTTCA+TGG | + | chr2_3:45710962-45710981 | Msa0294110:CDS | 45.0% | |
CTCCTCCAGTTTGGTAAAGT+AGG | + | chr2_3:45711076-45711095 | Msa0294110:CDS | 45.0% | |
CCTCCAGTTTGGTAAAGTAG+GGG | + | chr2_3:45711078-45711097 | Msa0294110:CDS | 45.0% | |
! | GCCATTTGCCTAACTAGCTT+TGG | + | chr2_3:45711154-45711173 | Msa0294110:CDS | 45.0% |
! | TGGTGTTGGAAGTTGAACCA+TGG | - | chr2_3:45711600-45711619 | None:intergenic | 45.0% |
TGTGGTACACTTCAATGTGC+GGG | - | chr2_3:45712121-45712140 | None:intergenic | 45.0% | |
TCAATGTGCGGGTGAATTTG+TGG | - | chr2_3:45712139-45712158 | None:intergenic | 45.0% | |
CTCGTTTCACTTCAATGTGC+GGG | - | chr2_3:45712150-45712169 | None:intergenic | 45.0% | |
!! | CCAATGTTTGGTCAAGTTGG+TGG | - | chr2_3:45712779-45712798 | None:intergenic | 45.0% |
CCACCAACTTGACCAAACAT+TGG | + | chr2_3:45712776-45712795 | Msa0294110:intron | 45.0% | |
GAGCCAATGTTTGGTCAAGT+TGG | - | chr2_3:45712782-45712801 | None:intergenic | 45.0% | |
AGTGTTAGGGAGCCAATGTT+TGG | - | chr2_3:45712791-45712810 | None:intergenic | 45.0% | |
TGAGGTTAGCAAAGTGTGGT+TGG | - | chr2_3:45712817-45712836 | None:intergenic | 45.0% | |
!! | CGTTGAATGAGTGGATTGTG+AGG | - | chr2_3:45712835-45712854 | None:intergenic | 45.0% |
!! | GTGGTAAAGCGTTGAATGAG+TGG | - | chr2_3:45712844-45712863 | None:intergenic | 45.0% |
CATGCTTCCAGAACTTCTTG+CGG | + | chr2_3:45713163-45713182 | Msa0294110:CDS | 45.0% | |
TTGATGTCACGGGAGAACAA+TGG | + | chr2_3:45713201-45713220 | Msa0294110:CDS | 45.0% | |
ATGAAGCATGGATACGGACA+CGG | + | chr2_3:45713479-45713498 | Msa0294110:intron | 45.0% | |
TACAAGTGTCAGTGTCGTGT+CGG | + | chr2_3:45713568-45713587 | Msa0294110:intron | 45.0% | |
ATGAAGCACAAACACACCTC+GGG | - | chr2_3:45713634-45713653 | None:intergenic | 45.0% | |
GAGGTGTGTTTGTGCTTCAT+AGG | + | chr2_3:45713634-45713653 | Msa0294110:intron | 45.0% | |
GTGTGTTTGTGCTTCATAGG+TGG | + | chr2_3:45713637-45713656 | Msa0294110:intron | 45.0% | |
ATGAAACCAAGTTACTCGGC+TGG | + | chr2_3:45713832-45713851 | Msa0294110:intron | 45.0% | |
GCTGGAAGTCATCAAAACCA+AGG | - | chr2_3:45714147-45714166 | None:intergenic | 45.0% | |
!! | GTTTTGATGACTTCCAGCCA+GGG | + | chr2_3:45714149-45714168 | Msa0294110:intron | 45.0% |
CCCACCACTGTGTTGTAAAT+TGG | + | chr2_3:45714185-45714204 | Msa0294110:intron | 45.0% | |
ATGGTGTAAGGGCAAGATAG+AGG | - | chr2_3:45714234-45714253 | None:intergenic | 45.0% | |
TCGCCAGCATTAACAGATAC+AGG | + | chr2_3:45714406-45714425 | Msa0294110:intron | 45.0% | |
CGCCAGCATTAACAGATACA+GGG | + | chr2_3:45714407-45714426 | Msa0294110:intron | 45.0% | |
! | GATGCCGATGACTTTTCACA+AGG | + | chr2_3:45714493-45714512 | Msa0294110:CDS | 45.0% |
GAGGACCTTGAGTTTAAACC+CGG | + | chr2_3:45714620-45714639 | Msa0294110:intron | 45.0% | |
GAGTTTAAACCCGGACAAAG+GGG | + | chr2_3:45714629-45714648 | Msa0294110:intron | 45.0% | |
CAACAAGTGACAGAACAAGC+CGG | + | chr2_3:45714836-45714855 | Msa0294110:CDS | 45.0% | |
TCTGTTTGCTTGCAAAACGC+CGG | - | chr2_3:45714858-45714877 | None:intergenic | 45.0% | |
! | ATCATTCGCCTTGGACGTTT+TGG | - | chr2_3:45714952-45714971 | None:intergenic | 45.0% |
AGAGAGCAAATCATTCGCCT+TGG | - | chr2_3:45714961-45714980 | None:intergenic | 45.0% | |
TCCAATTGCTCGTTCCACAT+CGG | - | chr2_3:45715102-45715121 | None:intergenic | 45.0% | |
CACCCCCTACTTTACAAAAC+TGG | - | chr2_3:45715251-45715270 | None:intergenic | 45.0% | |
AACGCATGGAAGGCAGATAA+GGG | - | chr2_3:45715300-45715319 | None:intergenic | 45.0% | |
AAACGCATGGAAGGCAGATA+AGG | - | chr2_3:45715301-45715320 | None:intergenic | 45.0% | |
!! | AACTAGCTTTGGCACCAAAC+TGG | + | chr2_3:45715332-45715351 | Msa0294110:CDS | 45.0% |
!! | TAATTAGTTAAAATAATTTA+TGG | + | chr2_3:45707068-45707087 | Msa0294110:intron | 5.0% |
!! | AAATTTCATTAATATATAAA+GGG | + | chr2_3:45708692-45708711 | Msa0294110:intron | 5.0% |
! | AAGAGTGTGTGAAAGGGTGG+TGG | - | chr2_3:45706578-45706597 | None:intergenic | 50.0% |
! | CGAAAGAGTGTGTGAAAGGG+TGG | - | chr2_3:45706581-45706600 | None:intergenic | 50.0% |
AGAGAGAGAGAGAGAGAGAG+AGG | - | chr2_3:45706637-45706656 | None:intergenic | 50.0% | |
AATCGGCGGATGGAACTGAT+TGG | + | chr2_3:45706801-45706820 | Msa0294110:CDS | 50.0% | |
! | TGATTGGTCGACCATGCTAC+CGG | + | chr2_3:45706817-45706836 | Msa0294110:CDS | 50.0% |
! | CACAAGCGACGACGTTTTGA+CGG | - | chr2_3:45706898-45706917 | None:intergenic | 50.0% |
CTTGTGCCTGCGTGTGTAAA+CGG | + | chr2_3:45706912-45706931 | Msa0294110:CDS | 50.0% | |
! | GTGATTGTGCCGTTACGTTG+AGG | - | chr2_3:45706971-45706990 | None:intergenic | 50.0% |
! | CAATGATGGGGAAGATCACG+TGG | - | chr2_3:45707962-45707981 | None:intergenic | 50.0% |
TGAGCCACCATAAAACGGCA+TGG | - | chr2_3:45708489-45708508 | None:intergenic | 50.0% | |
ACTGACTGCAAGCCTGTATC+AGG | - | chr2_3:45709108-45709127 | None:intergenic | 50.0% | |
AAAGAGGGGCAGGGGAATAA+AGG | - | chr2_3:45709614-45709633 | None:intergenic | 50.0% | |
CGATGAGCAGAACAGGAAAG+AGG | - | chr2_3:45709630-45709649 | None:intergenic | 50.0% | |
TCTGTTGTGATCGCCTTGGT+AGG | + | chr2_3:45709988-45710007 | Msa0294110:intron | 50.0% | |
CTTCACAGCTCGGACTTTCT+TGG | + | chr2_3:45710608-45710627 | Msa0294110:intron | 50.0% | |
! | TCTGTTTGCTGGCAAAACGC+CGG | - | chr2_3:45710703-45710722 | None:intergenic | 50.0% |
ATAAGCCCTCAAGTTCCTGC+TGG | + | chr2_3:45710722-45710741 | Msa0294110:CDS | 50.0% | |
AGTTCCTGCTGGTAACTTCG+AGG | + | chr2_3:45710733-45710752 | Msa0294110:CDS | 50.0% | |
TTGGCCCTCTCGACTTCAAA+AGG | - | chr2_3:45710784-45710803 | None:intergenic | 50.0% | |
!!! | TTTTGAAGTCGAGAGGGCCA+AGG | + | chr2_3:45710783-45710802 | Msa0294110:CDS | 50.0% |
AGTGAGCACATCATCCTCCT+TGG | - | chr2_3:45710803-45710822 | None:intergenic | 50.0% | |
TGCAAATGCTCATGCCACCT+TGG | - | chr2_3:45710941-45710960 | None:intergenic | 50.0% | |
GGCATGAGCATTTGCAATGC+TGG | + | chr2_3:45710945-45710964 | Msa0294110:CDS | 50.0% | |
CTTTCATGGTCGTGTGACAG+TGG | + | chr2_3:45710976-45710995 | Msa0294110:CDS | 50.0% | |
CTTTCAGCTGGTTGCTACTG+TGG | + | chr2_3:45711012-45711031 | Msa0294110:CDS | 50.0% | |
TACTGTGGACCAAAGCCAAC+CGG | + | chr2_3:45711027-45711046 | Msa0294110:CDS | 50.0% | |
TCTTCATCTCCTTTCCCTCC+CGG | - | chr2_3:45711049-45711068 | None:intergenic | 50.0% | |
GAAACGGTTCTCCTCCAGTT+TGG | + | chr2_3:45711067-45711086 | Msa0294110:CDS | 50.0% | |
CCCCTACTTTACCAAACTGG+AGG | - | chr2_3:45711081-45711100 | None:intergenic | 50.0% | |
CGTCCCCTACTTTACCAAAC+TGG | - | chr2_3:45711084-45711103 | None:intergenic | 50.0% | |
CTGCCTATAGTCCATGGTGA+AGG | - | chr2_3:45711110-45711129 | None:intergenic | 50.0% | |
TTAGGCAAATGGCAAACGCC+TGG | - | chr2_3:45711147-45711166 | None:intergenic | 50.0% | |
GAGCCATACACATGTGGAGT+CGG | - | chr2_3:45711365-45711384 | None:intergenic | 50.0% | |
TGTCACGAGCCATACACATG+TGG | - | chr2_3:45711371-45711390 | None:intergenic | 50.0% | |
!! | GGTGCTGATGTTGGGAAAGA+GGG | - | chr2_3:45711692-45711711 | None:intergenic | 50.0% |
!! | TGGTGCTGATGTTGGGAAAG+AGG | - | chr2_3:45711693-45711712 | None:intergenic | 50.0% |
CAATGTGCGGGGTGAATTTG+TGG | - | chr2_3:45712109-45712128 | None:intergenic | 50.0% | |
GTGGTACACTTCAATGTGCG+GGG | - | chr2_3:45712120-45712139 | None:intergenic | 50.0% | |
GCTTTACCACCCTCTCTTCT+CGG | + | chr2_3:45712854-45712873 | Msa0294110:intron | 50.0% | |
!! | ACTATCGGTGGTGTCATCTC+CGG | - | chr2_3:45713114-45713133 | None:intergenic | 50.0% |
TGACACCACCGATAGTGCAT+CGG | + | chr2_3:45713118-45713137 | Msa0294110:CDS | 50.0% | |
!! | CGCAAGAAGTTCTGGAAGCA+TGG | - | chr2_3:45713165-45713184 | None:intergenic | 50.0% |
CTTGTGCCTGCGTTTGCAAA+CGG | + | chr2_3:45713246-45713265 | Msa0294110:CDS | 50.0% | |
GTGGAGAGATATCACACGTG+AGG | + | chr2_3:45713268-45713287 | Msa0294110:intron | 50.0% | |
GATATCACACGTGAGGTCGT+CGG | + | chr2_3:45713275-45713294 | Msa0294110:intron | 50.0% | |
ATATCACACGTGAGGTCGTC+GGG | + | chr2_3:45713276-45713295 | Msa0294110:intron | 50.0% | |
GTCGGGTCACCTTCTCTTAA+CGG | + | chr2_3:45713293-45713312 | Msa0294110:intron | 50.0% | |
!! | GGTTTTGATGACTTCCAGCC+AGG | + | chr2_3:45714148-45714167 | Msa0294110:intron | 50.0% |
! | TTACAACACAGTGGTGGGGA+AGG | - | chr2_3:45714183-45714202 | None:intergenic | 50.0% |
ACAATTTATGATGCCCCGGC+TGG | + | chr2_3:45714805-45714824 | Msa0294110:CDS | 50.0% | |
! | CGGCTTGTTCTGTCACTTGT+TGG | - | chr2_3:45714838-45714857 | None:intergenic | 50.0% |
ATAAGCCCTCAAGTTCCTGC+TGG | + | chr2_3:45710722-45710741 | Msa0294110:CDS | 50.0% | |
CGTTACCAGCAGGAACTTGA+GGG | - | chr2_3:45714885-45714904 | None:intergenic | 50.0% | |
ACGTTACCAGCAGGAACTTG+AGG | - | chr2_3:45714886-45714905 | None:intergenic | 50.0% | |
CTTTCGCATATGGATGAGGC+AGG | - | chr2_3:45714991-45715010 | None:intergenic | 50.0% | |
TCCGATGTGGAACGAGCAAT+TGG | + | chr2_3:45715098-45715117 | Msa0294110:CDS | 50.0% | |
!! | TGGTTGGCTTTGATCCACAG+TGG | - | chr2_3:45715196-45715215 | None:intergenic | 50.0% |
ACTGTGGATCAAAGCCAACC+AGG | + | chr2_3:45715195-45715214 | Msa0294110:CDS | 50.0% | |
TGGATCAAAGCCAACCAGGA+GGG | + | chr2_3:45715199-45715218 | Msa0294110:CDS | 50.0% | |
GCAAATGGCAAACGCATGGA+AGG | - | chr2_3:45715310-45715329 | None:intergenic | 50.0% | |
!! | AGTTCCATCCGCCGATTCAC+CGG | - | chr2_3:45706798-45706817 | None:intergenic | 55.0% |
TGCAAGGAGATCCGGTAGCA+TGG | - | chr2_3:45706831-45706850 | None:intergenic | 55.0% | |
TAAAAGAGTCGACGTCGCCG+AGG | + | chr2_3:45706859-45706878 | Msa0294110:CDS | 55.0% | |
TCTCCACCGTTTACACACGC+AGG | - | chr2_3:45706921-45706940 | None:intergenic | 55.0% | |
!! | AAAACGGCATGGTGCCACCA+TGG | - | chr2_3:45708478-45708497 | None:intergenic | 55.0% |
!!! | GGTGGCACCATGCCGTTTTA+TGG | + | chr2_3:45708479-45708498 | Msa0294110:intron | 55.0% |
!!! | GGCACCATGCCGTTTTATGG+TGG | + | chr2_3:45708482-45708501 | Msa0294110:intron | 55.0% |
AGAACAGGAAAGAGGGGCAG+GGG | - | chr2_3:45709622-45709641 | None:intergenic | 55.0% | |
CAGAACAGGAAAGAGGGGCA+GGG | - | chr2_3:45709623-45709642 | None:intergenic | 55.0% | |
ATGCTGGCGATGAGCAGAAC+AGG | - | chr2_3:45709637-45709656 | None:intergenic | 55.0% | |
! | GCTTGTTGCAGGGGTGCAAA+CGG | + | chr2_3:45710150-45710169 | Msa0294110:intron | 55.0% |
! | GCAGGGGTGCAAACGGATTT+CGG | + | chr2_3:45710157-45710176 | Msa0294110:intron | 55.0% |
GGTTTGGCACCATTATGGGG+TGG | - | chr2_3:45710662-45710681 | None:intergenic | 55.0% | |
! | AGCTCTGGCACACGATGGTT+TGG | - | chr2_3:45710678-45710697 | None:intergenic | 55.0% |
CTGCTGGTAACTTCGAGGCA+GGG | + | chr2_3:45710738-45710757 | Msa0294110:CDS | 55.0% | |
TGCTGGTAACTTCGAGGCAG+GGG | + | chr2_3:45710739-45710758 | Msa0294110:CDS | 55.0% | |
ACTGTGGACCAAAGCCAACC+GGG | + | chr2_3:45711028-45711047 | Msa0294110:CDS | 55.0% | |
AGGGGACGATACCTTCACCA+TGG | + | chr2_3:45711096-45711115 | Msa0294110:CDS | 55.0% | |
CAAGGGCTGCCTATAGTCCA+TGG | - | chr2_3:45711116-45711135 | None:intergenic | 55.0% | |
AATGGCAAACGCCTGGAAGG+CGG | - | chr2_3:45711140-45711159 | None:intergenic | 55.0% | |
GCAAATGGCAAACGCCTGGA+AGG | - | chr2_3:45711143-45711162 | None:intergenic | 55.0% | |
GGTCCGACTCCACATGTGTA+TGG | + | chr2_3:45711359-45711378 | Msa0294110:intron | 55.0% | |
AGAGATCCGAGAAGAGAGGG+TGG | - | chr2_3:45712863-45712882 | None:intergenic | 55.0% | |
GGGAGAGATCCGAGAAGAGA+GGG | - | chr2_3:45712866-45712885 | None:intergenic | 55.0% | |
TGGGAGAGATCCGAGAAGAG+AGG | - | chr2_3:45712867-45712886 | None:intergenic | 55.0% | |
GCTCAGGCTCTCAATGCTAC+CGG | + | chr2_3:45713092-45713111 | Msa0294110:CDS | 55.0% | |
ACCGATAGTGCATCGGAGGA+CGG | + | chr2_3:45713125-45713144 | Msa0294110:CDS | 55.0% | |
TCCGTCCTCCGATGCACTAT+CGG | - | chr2_3:45713129-45713148 | None:intergenic | 55.0% | |
CATCGGAGGACGGAACAGAT+TGG | + | chr2_3:45713135-45713154 | Msa0294110:CDS | 55.0% | |
GCGACGACATTTCGACGATG+CGG | - | chr2_3:45713227-45713246 | None:intergenic | 55.0% | |
TCTCCACCGTTTGCAAACGC+AGG | - | chr2_3:45713255-45713274 | None:intergenic | 55.0% | |
ATACGGACACGGACACGACA+CGG | + | chr2_3:45713490-45713509 | Msa0294110:intron | 55.0% | |
! | TGTCAGTGTCGTGTCGGTGT+CGG | + | chr2_3:45713574-45713593 | Msa0294110:intron | 55.0% |
ACGAGTCCAGCCGAGTAACT+TGG | - | chr2_3:45713841-45713860 | None:intergenic | 55.0% | |
!! | TTGTTGGTTTGGCACCAGCC+GGG | - | chr2_3:45714822-45714841 | None:intergenic | 55.0% |
!! | CTTGTTGGTTTGGCACCAGC+CGG | - | chr2_3:45714823-45714842 | None:intergenic | 55.0% |
! | AGTTCCTGCTGGTAACGTCG+AGG | + | chr2_3:45714888-45714907 | Msa0294110:CDS | 55.0% |
GGAACGAGCAATTGGAGTGC+TGG | + | chr2_3:45715106-45715125 | Msa0294110:CDS | 55.0% | |
CTTTCAGCTGGTTGCCACTG+TGG | + | chr2_3:45715179-45715198 | Msa0294110:CDS | 55.0% | |
GTGGATCAAAGCCAACCAGG+AGG | + | chr2_3:45715198-45715217 | Msa0294110:CDS | 55.0% | |
TCTTCATCTCCTCTCCCTCC+TGG | - | chr2_3:45715216-45715235 | None:intergenic | 55.0% | |
TCGACACCGTCTCCGATGAC+CGG | + | chr2_3:45706759-45706778 | Msa0294110:CDS | 60.0% | |
ACGGTGTGGCCACTGTTCCT+CGG | - | chr2_3:45706879-45706898 | None:intergenic | 60.0% | |
!! | GCGACGACGTTTTGACGGTG+TGG | - | chr2_3:45706893-45706912 | None:intergenic | 60.0% |
GTGCCTGCGTGTGTAAACGG+TGG | + | chr2_3:45706915-45706934 | Msa0294110:CDS | 60.0% | |
TGGGGAAGATCACGTGGTCC+TGG | - | chr2_3:45707956-45707975 | None:intergenic | 60.0% | |
GCAGAACAGGAAAGAGGGGC+AGG | - | chr2_3:45709624-45709643 | None:intergenic | 60.0% | |
TGCACCCCTGCAACAAGCGA+AGG | - | chr2_3:45710148-45710167 | None:intergenic | 60.0% | |
TGCAGTGCAGTGCCGTGCTT+TGG | - | chr2_3:45710250-45710269 | None:intergenic | 60.0% | |
GACAGCCAGCCACCCCATAA+TGG | + | chr2_3:45710650-45710669 | Msa0294110:CDS | 60.0% | |
TGGCACCATTATGGGGTGGC+TGG | - | chr2_3:45710658-45710677 | None:intergenic | 60.0% | |
CATCGTGTGCCAGAGCTAGC+CGG | + | chr2_3:45710681-45710700 | Msa0294110:CDS | 60.0% | |
CCTGCCTCGAAGTTACCAGC+AGG | - | chr2_3:45710740-45710759 | None:intergenic | 60.0% | |
CCTGCTGGTAACTTCGAGGC+AGG | + | chr2_3:45710737-45710756 | Msa0294110:CDS | 60.0% | |
TGAAGTCGAGAGGGCCAAGG+AGG | + | chr2_3:45710786-45710805 | Msa0294110:CDS | 60.0% | |
TGGACCAAAGCCAACCGGGA+GGG | + | chr2_3:45711032-45711051 | Msa0294110:CDS | 60.0% | |
!! | CTTTCCCTCCCGGTTGGCTT+TGG | - | chr2_3:45711039-45711058 | None:intergenic | 60.0% |
CAAAGCCAACCGGGAGGGAA+AGG | + | chr2_3:45711037-45711056 | Msa0294110:CDS | 60.0% | |
CATCTCCTTTCCCTCCCGGT+TGG | - | chr2_3:45711045-45711064 | None:intergenic | 60.0% | |
AACGCCTGGAAGGCGGACAA+GGG | - | chr2_3:45711133-45711152 | None:intergenic | 60.0% | |
AAACGCCTGGAAGGCGGACA+AGG | - | chr2_3:45711134-45711153 | None:intergenic | 60.0% | |
CACCACCGATAGTGCATCGG+AGG | + | chr2_3:45713121-45713140 | Msa0294110:CDS | 60.0% | |
GTCCTCCGATGCACTATCGG+TGG | - | chr2_3:45713126-45713145 | None:intergenic | 60.0% | |
GTGCCTGCGTTTGCAAACGG+TGG | + | chr2_3:45713249-45713268 | Msa0294110:CDS | 60.0% | |
GGTTAGACGTGTCGCGGTGT+CGG | - | chr2_3:45713613-45713632 | None:intergenic | 60.0% | |
! | ACCTCGGGTTAGACGTGTCG+CGG | - | chr2_3:45713619-45713638 | None:intergenic | 60.0% |
!! | TGTTGGTTTGGCACCAGCCG+GGG | - | chr2_3:45714821-45714840 | None:intergenic | 60.0% |
! | CTGCTGGTAACGTCGAGGCA+GGG | + | chr2_3:45714893-45714912 | Msa0294110:CDS | 60.0% |
CAAAGCCAACCAGGAGGGAG+AGG | + | chr2_3:45715204-45715223 | Msa0294110:CDS | 60.0% | |
CATCTCCTCTCCCTCCTGGT+TGG | - | chr2_3:45715212-45715231 | None:intergenic | 60.0% | |
ACCGTCTCCGATGACCGGAG+AGG | + | chr2_3:45706764-45706783 | Msa0294110:CDS | 65.0% | |
GCCTCTCCGGTCATCGGAGA+CGG | - | chr2_3:45706768-45706787 | None:intergenic | 65.0% | |
TCGACGTCGCCGAGGAACAG+TGG | + | chr2_3:45706867-45706886 | Msa0294110:CDS | 65.0% | |
!! | CGGCTAGCTCTGGCACACGA+TGG | - | chr2_3:45710683-45710702 | None:intergenic | 65.0% |
! | GGCAAAACGCCGGCTAGCTC+TGG | - | chr2_3:45710693-45710712 | None:intergenic | 65.0% |
GTGGACCAAAGCCAACCGGG+AGG | + | chr2_3:45711031-45711050 | Msa0294110:CDS | 65.0% | |
ACCGCGACACGTCTAACCCG+AGG | + | chr2_3:45713615-45713634 | Msa0294110:intron | 65.0% | |
CCTGCCTCGACGTTACCAGC+AGG | - | chr2_3:45714895-45714914 | None:intergenic | 65.0% | |
! | CCTGCTGGTAACGTCGAGGC+AGG | + | chr2_3:45714892-45714911 | Msa0294110:CDS | 65.0% |
! | TCCGATGACCGGAGAGGCGC+CGG | + | chr2_3:45706770-45706789 | Msa0294110:CDS | 70.0% |
!! | ATCCGCCGATTCACCGGCGC+CGG | - | chr2_3:45706792-45706811 | None:intergenic | 70.0% |
GCAGCCCTTGTCCGCCTTCC+AGG | + | chr2_3:45711126-45711145 | Msa0294110:CDS | 70.0% | |
! | CAGTGGTGGGGAAGGTCGCG+TGG | - | chr2_3:45714175-45714194 | None:intergenic | 70.0% |
GCCGGCGCCTCTCCGGTCAT+CGG | - | chr2_3:45706774-45706793 | None:intergenic | 75.0% | |
!! | AGGCGCCGGCGCCGGTGAAT+CGG | + | chr2_3:45706784-45706803 | Msa0294110:CDS | 75.0% |
!! | GGCGCCGGTGAATCGGCGGA+TGG | + | chr2_3:45706791-45706810 | Msa0294110:CDS | 75.0% |
GAAGGTCGCGTGGCCCTGGC+TGG | - | chr2_3:45714165-45714184 | None:intergenic | 75.0% | |
TGGGGAAGGTCGCGTGGCCC+TGG | - | chr2_3:45714169-45714188 | None:intergenic | 75.0% | |
!!! | CGCCGGCGCCGGTGAATCGG+CGG | + | chr2_3:45706787-45706806 | Msa0294110:CDS | 80.0% |
!!! | GACCGGAGAGGCGCCGGCGC+CGG | + | chr2_3:45706776-45706795 | Msa0294110:CDS | 85.0% |
!!! | CACCGGCGCCGGCGCCTCTC+CGG | - | chr2_3:45706781-45706800 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 45706541 | 45715365 | 45706541 | ID=Msa0294110;Name=Msa0294110 |
chr2_3 | mRNA | 45706541 | 45715365 | 45706541 | ID=Msa0294110-mRNA-1;Parent=Msa0294110;Name=Msa0294110-mRNA-1;_AED=0.26;_eAED=0.26;_QI=154|0.42|0.25|1|1|1|8|0|730 |
chr2_3 | exon | 45706541 | 45707012 | 45706541 | ID=Msa0294110-mRNA-1:exon:14302;Parent=Msa0294110-mRNA-1 |
chr2_3 | exon | 45707953 | 45708040 | 45707953 | ID=Msa0294110-mRNA-1:exon:14303;Parent=Msa0294110-mRNA-1 |
chr2_3 | exon | 45709022 | 45709125 | 45709022 | ID=Msa0294110-mRNA-1:exon:14304;Parent=Msa0294110-mRNA-1 |
chr2_3 | exon | 45709602 | 45709783 | 45709602 | ID=Msa0294110-mRNA-1:exon:14305;Parent=Msa0294110-mRNA-1 |
chr2_3 | exon | 45710616 | 45711194 | 45710616 | ID=Msa0294110-mRNA-1:exon:14306;Parent=Msa0294110-mRNA-1 |
chr2_3 | exon | 45713079 | 45713284 | 45713079 | ID=Msa0294110-mRNA-1:exon:14307;Parent=Msa0294110-mRNA-1 |
chr2_3 | exon | 45714413 | 45714542 | 45714413 | ID=Msa0294110-mRNA-1:exon:14308;Parent=Msa0294110-mRNA-1 |
chr2_3 | exon | 45714780 | 45715365 | 45714780 | ID=Msa0294110-mRNA-1:exon:14309;Parent=Msa0294110-mRNA-1 |
chr2_3 | five_prime_UTR | 45706541 | 45706694 | 45706541 | ID=Msa0294110-mRNA-1:five_prime_utr;Parent=Msa0294110-mRNA-1 |
chr2_3 | CDS | 45706695 | 45707012 | 45706695 | ID=Msa0294110-mRNA-1:cds;Parent=Msa0294110-mRNA-1 |
chr2_3 | CDS | 45707953 | 45708040 | 45707953 | ID=Msa0294110-mRNA-1:cds;Parent=Msa0294110-mRNA-1 |
chr2_3 | CDS | 45709022 | 45709125 | 45709022 | ID=Msa0294110-mRNA-1:cds;Parent=Msa0294110-mRNA-1 |
chr2_3 | CDS | 45709602 | 45709783 | 45709602 | ID=Msa0294110-mRNA-1:cds;Parent=Msa0294110-mRNA-1 |
chr2_3 | CDS | 45710616 | 45711194 | 45710616 | ID=Msa0294110-mRNA-1:cds;Parent=Msa0294110-mRNA-1 |
chr2_3 | CDS | 45713079 | 45713284 | 45713079 | ID=Msa0294110-mRNA-1:cds;Parent=Msa0294110-mRNA-1 |
chr2_3 | CDS | 45714413 | 45714542 | 45714413 | ID=Msa0294110-mRNA-1:cds;Parent=Msa0294110-mRNA-1 |
chr2_3 | CDS | 45714780 | 45715365 | 45714780 | ID=Msa0294110-mRNA-1:cds;Parent=Msa0294110-mRNA-1 |
Gene Sequence |
Protein sequence |