Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295900 | GAU29688.1 | 67.611 | 565 | 137 | 8 | 13 | 546 | 30 | 579 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295900 | sp|Q84VX3|ALF4_ARATH | 38.368 | 576 | 282 | 13 | 24 | 544 | 67 | 624 | 1.15e-97 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295900 | A0A2Z6MD40 | 67.611 | 565 | 137 | 8 | 13 | 546 | 30 | 579 | 0.0 | 721 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0295900 | Msa0417100 | 0.803935 | 2.749086e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295900 | MtrunA17_Chr4g0005791 | 64.777 | 582 | 151 | 7 | 13 | 547 | 30 | 604 | 0.0 | 705 |
| Msa0295900 | MtrunA17_Chr1g0149701 | 61.231 | 325 | 91 | 4 | 203 | 520 | 8 | 304 | 1.58e-122 | 363 |
| Msa0295900 | MtrunA17_Chr1g0149181 | 82.609 | 138 | 22 | 1 | 115 | 252 | 3 | 138 | 1.16e-68 | 218 |
| Msa0295900 | MtrunA17_Chr1g0149691 | 84.000 | 75 | 8 | 1 | 55 | 125 | 48 | 122 | 3.22e-34 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295900 | AT5G11030.6 | 38.636 | 572 | 282 | 12 | 24 | 544 | 43 | 596 | 2.78e-101 | 318 |
| Msa0295900 | AT5G11030.2 | 38.368 | 576 | 282 | 13 | 24 | 544 | 67 | 624 | 1.17e-98 | 312 |
| Msa0295900 | AT5G11030.3 | 38.489 | 556 | 281 | 12 | 24 | 544 | 43 | 572 | 1.50e-98 | 310 |
| Msa0295900 | AT5G11030.1 | 38.214 | 560 | 281 | 13 | 24 | 544 | 67 | 600 | 3.88e-96 | 305 |
| Msa0295900 | AT5G11030.8 | 37.972 | 503 | 256 | 9 | 24 | 488 | 43 | 527 | 8.07e-87 | 278 |
| Msa0295900 | AT5G11030.9 | 39.221 | 385 | 209 | 5 | 24 | 386 | 43 | 424 | 1.74e-76 | 248 |
| Msa0295900 | AT5G11030.4 | 36.929 | 482 | 248 | 9 | 24 | 467 | 43 | 506 | 5.85e-76 | 249 |
| Msa0295900 | AT5G11030.5 | 36.929 | 482 | 248 | 9 | 24 | 467 | 43 | 506 | 5.85e-76 | 249 |
| Msa0295900 | AT5G11030.7 | 36.929 | 482 | 248 | 9 | 24 | 467 | 43 | 506 | 5.85e-76 | 249 |
Find 99 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATCCGTATATATCATTT+TGG | 0.125803 | 2_3:+48726082 | Msa0295900:CDS |
| AATTCCCTTGCTGTGTTAAA+AGG | 0.195768 | 2_3:+48725462 | Msa0295900:CDS |
| AGCATTATCCCTCCTTTATC+AGG | 0.207745 | 2_3:+48723954 | Msa0295900:CDS |
| TCATGGCTCTTGAGATTAAT+TGG | 0.212519 | 2_3:+48721190 | None:intergenic |
| GGGAATTATTTCTGTGTTCT+AGG | 0.235809 | 2_3:-48725446 | None:intergenic |
| AACCTTTCAGGCTGTTATAT+TGG | 0.263078 | 2_3:+48725404 | Msa0295900:intron |
| TTCCTTCAATTCTTAATTCA+TGG | 0.269211 | 2_3:+48724217 | Msa0295900:CDS |
| GCACCATTTCAAGTGGATTT+AGG | 0.282920 | 2_3:-48726740 | None:intergenic |
| CAGTACTAGCGAATGGTAAC+TGG | 0.297041 | 2_3:-48724651 | None:intergenic |
| AAGCATGGTGCCGCTCTTGC+AGG | 0.306560 | 2_3:+48724914 | Msa0295900:CDS |
| ATGGAGATATCCGTGGAAAC+TGG | 0.307412 | 2_3:+48725225 | Msa0295900:CDS |
| GAGAAACTCCGAGCTCTTCT+TGG | 0.311506 | 2_3:+48724457 | Msa0295900:CDS |
| CCCTTTGAGATCCCTGATAA+AGG | 0.317402 | 2_3:-48723966 | None:intergenic |
| TGGCATTTCAACTTCTTGTT+TGG | 0.318246 | 2_3:+48723429 | Msa0295900:CDS |
| TTCATGGAAGGTTGTACATT+TGG | 0.329540 | 2_3:+48724233 | Msa0295900:CDS |
| GGCTGTTATATTGGCTATCA+TGG | 0.351013 | 2_3:+48725413 | Msa0295900:intron |
| AACGCTGTTTCAAAGTTTGC+TGG | 0.355535 | 2_3:+48723409 | Msa0295900:CDS |
| ATCAAAAGGTGGCAAGCAAT+AGG | 0.364925 | 2_3:+48725119 | Msa0295900:CDS |
| CGTTCTCAAACTGACGCCTC+TGG | 0.373749 | 2_3:-48724182 | None:intergenic |
| TGCAGAGCTGATAAAAGATT+TGG | 0.376917 | 2_3:-48725281 | None:intergenic |
| TCTTCTTTATGTCCACTGTC+TGG | 0.380238 | 2_3:-48722904 | None:intergenic |
| GGAGCCCAAAATGATATATA+CGG | 0.385184 | 2_3:-48726087 | None:intergenic |
| TTCCATGAATTAAGAATTGA+AGG | 0.399901 | 2_3:-48724219 | None:intergenic |
| GAGCAACAACCAAGCATTGC+AGG | 0.412604 | 2_3:-48724489 | None:intergenic |
| CGACCTAAATCCACTTGAAA+TGG | 0.415542 | 2_3:+48726737 | Msa0295900:CDS |
| AGAAAATAACGATGATTGTA+TGG | 0.426241 | 2_3:+48724874 | Msa0295900:intron |
| ATATGAAATTTGCAATAAGT+TGG | 0.447279 | 2_3:+48724314 | Msa0295900:CDS |
| GCAAACTTTGAAACAGCGTT+TGG | 0.448885 | 2_3:-48723406 | None:intergenic |
| GTGCTTCGTTATTAGTCTGT+TGG | 0.453750 | 2_3:-48726062 | None:intergenic |
| TCAAAAGGTGGCAAGCAATA+GGG | 0.453992 | 2_3:+48725120 | Msa0295900:CDS |
| ATTTAACTGAAGCAGACATT+AGG | 0.458860 | 2_3:+48723912 | Msa0295900:intron |
| CGCCCACGTCAGCCTAGAAA+AGG | 0.462656 | 2_3:-48725162 | None:intergenic |
| TCCCAATGTCTTTGAGTTGG+TGG | 0.464260 | 2_3:+48726107 | Msa0295900:CDS |
| TTCGTAATAACCAGATCAAA+AGG | 0.475606 | 2_3:+48725105 | Msa0295900:CDS |
| GGCTCCCAATGTCTTTGAGT+TGG | 0.477817 | 2_3:+48726104 | Msa0295900:CDS |
| CTGTCATTATACCTGTCACT+CGG | 0.484129 | 2_3:-48726695 | None:intergenic |
| TCTATATGTCCTGCAATGCT+TGG | 0.492257 | 2_3:+48724480 | Msa0295900:CDS |
| CACTTGAAATGGTGCTGTCT+CGG | 0.494883 | 2_3:+48726748 | Msa0295900:CDS |
| CGCATCACGCTGCTCAGGTA+GGG | 0.499009 | 2_3:-48726166 | None:intergenic |
| CTTGAGATTAATTGGAGCAA+GGG | 0.508613 | 2_3:+48721198 | Msa0295900:CDS |
| TGAAATTTGCAATAAGTTGG+TGG | 0.508641 | 2_3:+48724317 | Msa0295900:CDS |
| CCTTTGCAGACCCGAGTGAC+AGG | 0.513208 | 2_3:+48726684 | Msa0295900:CDS |
| TTGGCATATAAGATGACCAC+TGG | 0.515463 | 2_3:-48725262 | None:intergenic |
| TCCACCAACTCAAAGACATT+GGG | 0.519632 | 2_3:-48726108 | None:intergenic |
| GATGTCTTTGACAGAGCTGT+TGG | 0.521812 | 2_3:+48724276 | Msa0295900:CDS |
| AATACCGCATCACGCTGCTC+AGG | 0.522189 | 2_3:-48726171 | None:intergenic |
| TTCAATTCTTAATTCATGGA+AGG | 0.524330 | 2_3:+48724221 | Msa0295900:CDS |
| CAAAAGCCATTGTATAGTAG+TGG | 0.529691 | 2_3:-48725494 | None:intergenic |
| TTCCACCAACTCAAAGACAT+TGG | 0.530547 | 2_3:-48726109 | None:intergenic |
| TGGAGATATCCGTGGAAACT+GGG | 0.532584 | 2_3:+48725226 | Msa0295900:CDS |
| AGTTGTTGACAATCTTTCCA+TGG | 0.536030 | 2_3:+48723378 | Msa0295900:CDS |
| TTCAACTTCTTGTTTGGACA+TGG | 0.536510 | 2_3:+48723435 | Msa0295900:CDS |
| TTGGAGCAAGGGATTTCGTA+AGG | 0.537902 | 2_3:+48721209 | Msa0295900:CDS |
| CAGCATCTGATAAAGAATCA+AGG | 0.538203 | 2_3:-48722870 | None:intergenic |
| CCTTTATCAGGGATCTCAAA+GGG | 0.540684 | 2_3:+48723966 | Msa0295900:CDS |
| AACAGCGTTTGGCAGTTCCA+TGG | 0.542488 | 2_3:-48723395 | None:intergenic |
| CGAGACAGCACCATTTCAAG+TGG | 0.542764 | 2_3:-48726747 | None:intergenic |
| AACTTATGATGTTGAGGCTG+TGG | 0.548805 | 2_3:+48724727 | Msa0295900:CDS |
| TCACGAATTTCATCGAATTG+TGG | 0.549287 | 2_3:+48724680 | Msa0295900:CDS |
| TACTCAAGGTCTACAACGAA+TGG | 0.552350 | 2_3:+48726655 | Msa0295900:CDS |
| TTCTTGATTAGCATCACAGA+TGG | 0.560400 | 2_3:+48725206 | Msa0295900:CDS |
| ATCAAGGAGCAATTTACTCA+AGG | 0.562810 | 2_3:+48726641 | Msa0295900:CDS |
| TCCTTTATCAGGGATCTCAA+AGG | 0.564680 | 2_3:+48723965 | Msa0295900:CDS |
| ACTACACTGGAGTCTTATCA+AGG | 0.568792 | 2_3:+48726625 | Msa0295900:CDS |
| GCATTATCCCTCCTTTATCA+GGG | 0.572736 | 2_3:+48723955 | Msa0295900:CDS |
| CCGCATCACGCTGCTCAGGT+AGG | 0.575229 | 2_3:-48726167 | None:intergenic |
| AGTAACAACTTATGATGTTG+AGG | 0.576793 | 2_3:+48724721 | Msa0295900:CDS |
| GACGCCTCTGGGTAGAGATA+AGG | 0.578349 | 2_3:-48724170 | None:intergenic |
| TCTTGAGATTAATTGGAGCA+AGG | 0.579791 | 2_3:+48721197 | Msa0295900:CDS |
| GTTCTCAAACTGACGCCTCT+GGG | 0.580107 | 2_3:-48724181 | None:intergenic |
| CCTGTCACTCGGGTCTGCAA+AGG | 0.586132 | 2_3:-48726684 | None:intergenic |
| ATTTGACAAGCTCTGAGATG+AGG | 0.590115 | 2_3:-48722846 | None:intergenic |
| GTACATCATCCCAGTTTCCA+CGG | 0.592907 | 2_3:-48725235 | None:intergenic |
| CATATAGACCAAGAAGAGCT+CGG | 0.595242 | 2_3:-48724465 | None:intergenic |
| TTTAGTTGATCTTATCAGGA+GGG | 0.596360 | 2_3:+48725993 | Msa0295900:CDS |
| AGTACTAGCGAATGGTAACT+GGG | 0.600844 | 2_3:-48724650 | None:intergenic |
| GATCAGTTTATAGCGAAATG+TGG | 0.609846 | 2_3:+48723472 | Msa0295900:CDS |
| CCTACCTGAGCAGCGTGATG+CGG | 0.618000 | 2_3:+48726167 | Msa0295900:CDS |
| TCACGCTGCTCAGGTAGGGA+AGG | 0.623367 | 2_3:-48726162 | None:intergenic |
| ACAGGAAAGACAAACTACAC+TGG | 0.628349 | 2_3:+48726612 | Msa0295900:intron |
| TTGAGATCCCTGATAAAGGA+GGG | 0.632010 | 2_3:-48723962 | None:intergenic |
| AGTACTAAAACCTCCACAAG+GGG | 0.632422 | 2_3:+48726134 | Msa0295900:CDS |
| TGTCATTATACCTGTCACTC+GGG | 0.641062 | 2_3:-48726694 | None:intergenic |
| ACAGTTGCAGTACTAGCGAA+TGG | 0.652349 | 2_3:-48724658 | None:intergenic |
| CTAACTCTAACCTGCAAGAG+CGG | 0.658039 | 2_3:-48724924 | None:intergenic |
| TTTGAGATCCCTGATAAAGG+AGG | 0.658069 | 2_3:-48723963 | None:intergenic |
| TGAACTTCAACATTCTCTCG+AGG | 0.659134 | 2_3:+48722816 | Msa0295900:CDS |
| GAGTTTCCACTACTATACAA+TGG | 0.663571 | 2_3:+48725488 | Msa0295900:CDS |
| GTATTAATGACAGAATCTGA+AGG | 0.664164 | 2_3:+48726388 | Msa0295900:CDS |
| TAGTACTAAAACCTCCACAA+GGG | 0.667267 | 2_3:+48726133 | Msa0295900:CDS |
| TTAGTACTAAAACCTCCACA+AGG | 0.669795 | 2_3:+48726132 | Msa0295900:CDS |
| CAGTCCTTATCTCTACCCAG+AGG | 0.670046 | 2_3:+48724166 | Msa0295900:intron |
| TGGCATATAAGATGACCACT+GGG | 0.674291 | 2_3:-48725261 | None:intergenic |
| GTAATAACCAGATCAAAAGG+TGG | 0.680023 | 2_3:+48725108 | Msa0295900:CDS |
| GCACTCTCTGATCCAGACAG+TGG | 0.690445 | 2_3:+48722892 | Msa0295900:CDS |
| ATCACAGATGGAGATATCCG+TGG | 0.713894 | 2_3:+48725218 | Msa0295900:CDS |
| GGGATGATGTACATTCCCAG+TGG | 0.747553 | 2_3:+48725246 | Msa0295900:CDS |
| TGCTAAAGAAGATATCATTG+CGG | 0.754498 | 2_3:+48725070 | Msa0295900:CDS |
| GTACTAAAACCTCCACAAGG+GGG | 0.766590 | 2_3:+48726135 | Msa0295900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTTTATTTATTTT+TGG | + | chr2_3:48723861-48723880 | Msa0295900:intron | 0.0% |
| !!! | ATTAAACTAATGATATTTTA+TGG | + | chr2_3:48721526-48721545 | Msa0295900:intron | 10.0% |
| !!! | TTAATAATCTTTATTTGTAA+CGG | - | chr2_3:48722629-48722648 | None:intergenic | 10.0% |
| !!! | CTTTTATATATTTTATTGAA+AGG | + | chr2_3:48722744-48722763 | Msa0295900:intron | 10.0% |
| !! | AATCTGATATATTTAATTAA+TGG | - | chr2_3:48723605-48723624 | None:intergenic | 10.0% |
| !! | ATTAATTAAATATATCAGAT+TGG | + | chr2_3:48723604-48723623 | Msa0295900:intron | 10.0% |
| !! | AAAAAAATTGTATAAACAAA+CGG | - | chr2_3:48724834-48724853 | None:intergenic | 10.0% |
| !!! | AAAAATATTTTCAACTTAAA+AGG | - | chr2_3:48725543-48725562 | None:intergenic | 10.0% |
| !! | TGTAAAAACAAAATATTGAA+TGG | + | chr2_3:48721696-48721715 | Msa0295900:intron | 15.0% |
| !! | TATGCATTTAATCATAAATA+AGG | - | chr2_3:48723541-48723560 | None:intergenic | 15.0% |
| !!! | TAATTTGATGTATTTCTAAA+TGG | + | chr2_3:48723734-48723753 | Msa0295900:intron | 15.0% |
| !! | AAATAAAAAATAAATGACAC+TGG | - | chr2_3:48723856-48723875 | None:intergenic | 15.0% |
| !! | CAACATATTAAATCATATTA+CGG | - | chr2_3:48724589-48724608 | None:intergenic | 15.0% |
| !! | TACAATAAATTTCAATCAAT+GGG | - | chr2_3:48725746-48725765 | None:intergenic | 15.0% |
| !!! | GAATTAAATTGTTTTGAAAT+CGG | - | chr2_3:48726313-48726332 | None:intergenic | 15.0% |
| !!! | TCAAAATTAAAGTATTATTC+AGG | + | chr2_3:48726569-48726588 | Msa0295900:intron | 15.0% |
| !!! | GGAATTTTTAAATAATCAAC+CGG | + | chr2_3:48721717-48721736 | Msa0295900:intron | 20.0% |
| !!! | GAATTTTTAAATAATCAACC+GGG | + | chr2_3:48721718-48721737 | Msa0295900:intron | 20.0% |
| !!! | AATTTTTAAATAATCAACCG+GGG | + | chr2_3:48721719-48721738 | Msa0295900:intron | 20.0% |
| !! | ATTTGTGAGTAAAATTGTAT+CGG | - | chr2_3:48721752-48721771 | None:intergenic | 20.0% |
| !! | ATGTAAGATTTCTTTGTAAA+CGG | - | chr2_3:48721919-48721938 | None:intergenic | 20.0% |
| !!! | TTGTTACTTTATACAATGAT+TGG | - | chr2_3:48722070-48722089 | None:intergenic | 20.0% |
| !!! | GCAGTTAACTTTTTTATTAT+TGG | + | chr2_3:48723996-48724015 | Msa0295900:intron | 20.0% |
| !! | ATATGAAATTTGCAATAAGT+TGG | + | chr2_3:48724314-48724333 | Msa0295900:CDS | 20.0% |
| !! | CTACAATAAATTTCAATCAA+TGG | - | chr2_3:48725747-48725766 | None:intergenic | 20.0% |
| !! | GAATCATATGAGTATAAATT+TGG | + | chr2_3:48725795-48725814 | Msa0295900:intron | 20.0% |
| !! | AGAAACAAGTATTAAGTTAA+TGG | + | chr2_3:48726464-48726483 | Msa0295900:intron | 20.0% |
| !! | GAAACAAGTATTAAGTTAAT+GGG | + | chr2_3:48726465-48726484 | Msa0295900:intron | 20.0% |
| !!! | AGGTAAAAATATTTCTGTTT+AGG | - | chr2_3:48726512-48726531 | None:intergenic | 20.0% |
| !!! | TAAACAGAAATATTTTTACC+TGG | + | chr2_3:48726511-48726530 | Msa0295900:intron | 20.0% |
| ! | TATTCATTGTAGTTCTCAAT+TGG | + | chr2_3:48721311-48721330 | Msa0295900:intron | 25.0% |
| !!! | ATGTTAAAACTCTTTTGAAG+AGG | - | chr2_3:48721366-48721385 | None:intergenic | 25.0% |
| ! | AAACTTAAACCTAAGTATGA+CGG | - | chr2_3:48721836-48721855 | None:intergenic | 25.0% |
| !! | TGAAGTGTTTGATATATTAG+CGG | + | chr2_3:48722289-48722308 | Msa0295900:intron | 25.0% |
| !!! | TGTCGTTTATTTTTATCAGT+CGG | - | chr2_3:48722320-48722339 | None:intergenic | 25.0% |
| ! | AGAAGTTGAAAGGATAAAAA+TGG | + | chr2_3:48722709-48722728 | Msa0295900:intron | 25.0% |
| !!! | ATACTTTTTTTTTGTACTCG+AGG | + | chr2_3:48723075-48723094 | Msa0295900:intron | 25.0% |
| ! | GATAAAAATTGCTTATGACA+TGG | - | chr2_3:48723187-48723206 | None:intergenic | 25.0% |
| ! | GGTTGAAATACTTTATATGA+GGG | - | chr2_3:48723262-48723281 | None:intergenic | 25.0% |
| ! | AAATCAACTAACGATCAATA+AGG | - | chr2_3:48723351-48723370 | None:intergenic | 25.0% |
| !! | AGAATAAAAAGCATGTACTT+TGG | - | chr2_3:48723499-48723518 | None:intergenic | 25.0% |
| ! | ATAATGTATAACCGTAATCT+TGG | + | chr2_3:48724021-48724040 | Msa0295900:intron | 25.0% |
| ! | TCTTTATTGAACCAAGATTA+CGG | - | chr2_3:48724035-48724054 | None:intergenic | 25.0% |
| ! | AGGACTGAAAATGAAAAAAT+AGG | - | chr2_3:48724153-48724172 | None:intergenic | 25.0% |
| ! | TTCCTTCAATTCTTAATTCA+TGG | + | chr2_3:48724217-48724236 | Msa0295900:CDS | 25.0% |
| ! | TTCCATGAATTAAGAATTGA+AGG | - | chr2_3:48724222-48724241 | None:intergenic | 25.0% |
| ! | TTCAATTCTTAATTCATGGA+AGG | + | chr2_3:48724221-48724240 | Msa0295900:CDS | 25.0% |
| !! | ATTTCATCCTTTTCTTTTTG+AGG | + | chr2_3:48724357-48724376 | Msa0295900:intron | 25.0% |
| !!! | CATTTTTTAACTGATACAAC+AGG | + | chr2_3:48724420-48724439 | Msa0295900:intron | 25.0% |
| !!! | TACAATCATCGTTATTTTCT+GGG | - | chr2_3:48724874-48724893 | None:intergenic | 25.0% |
| !!! | ATACAATCATCGTTATTTTC+TGG | - | chr2_3:48724875-48724894 | None:intergenic | 25.0% |
| ! | AGAAAATAACGATGATTGTA+TGG | + | chr2_3:48724874-48724893 | Msa0295900:intron | 25.0% |
| !!! | GATCTTTTACTTTTTCAACA+AGG | + | chr2_3:48725344-48725363 | Msa0295900:intron | 25.0% |
| ! | CTGATATTTCAATTTCTCAA+AGG | + | chr2_3:48725604-48725623 | Msa0295900:intron | 25.0% |
| !! | TTATTGTAGTCTCACTATTT+TGG | + | chr2_3:48725758-48725777 | Msa0295900:intron | 25.0% |
| !! | CCATTGGTTGAAATTTATAT+AGG | - | chr2_3:48725826-48725845 | None:intergenic | 25.0% |
| ! | CCTATATAAATTTCAACCAA+TGG | + | chr2_3:48725823-48725842 | Msa0295900:intron | 25.0% |
| !! | ACATCCGTATATATCATTTT+GGG | + | chr2_3:48726083-48726102 | Msa0295900:CDS | 25.0% |
| ! | TTGAAGATATTGAAGATATC+TGG | - | chr2_3:48726233-48726252 | None:intergenic | 25.0% |
| !!! | CATCATTCTCTCTATTTTTT+GGG | + | chr2_3:48726279-48726298 | Msa0295900:intron | 25.0% |
| !!! | ATCATTCTCTCTATTTTTTG+GGG | + | chr2_3:48726280-48726299 | Msa0295900:intron | 25.0% |
| !!! | AAATATTTTTACCTGGATAG+TGG | + | chr2_3:48726518-48726537 | Msa0295900:intron | 25.0% |
| ! | TAATTATTAAACCACTATCC+AGG | - | chr2_3:48726532-48726551 | None:intergenic | 25.0% |
| !! | TTGCAATTTCTTTTTGTAAC+AGG | + | chr2_3:48726594-48726613 | Msa0295900:intron | 25.0% |
| TATTCTTTGCAGTTCTCAAT+TGG | + | chr2_3:48721236-48721255 | Msa0295900:intron | 30.0% | |
| AGCTTAATCAATTAGGTCTT+GGG | - | chr2_3:48721415-48721434 | None:intergenic | 30.0% | |
| TAGCTTAATCAATTAGGTCT+TGG | - | chr2_3:48721416-48721435 | None:intergenic | 30.0% | |
| !! | CTCTTCTAGCTTAATCAATT+AGG | - | chr2_3:48721422-48721441 | None:intergenic | 30.0% |
| ATGATTGGAGAATTGTTTGA+AGG | - | chr2_3:48722055-48722074 | None:intergenic | 30.0% | |
| ! | CTTTGTTTGGTAAAAAGTAG+CGG | + | chr2_3:48722214-48722233 | Msa0295900:intron | 30.0% |
| TCAATCTGTTAACTTATTCG+TGG | - | chr2_3:48722266-48722285 | None:intergenic | 30.0% | |
| !! | CCATTACCAAAGTTTGTTAT+CGG | + | chr2_3:48722478-48722497 | Msa0295900:intron | 30.0% |
| TTATGAAGTTCCTCTAAATG+TGG | - | chr2_3:48722508-48722527 | None:intergenic | 30.0% | |
| !! | GATGTTAGTATTTGACTTGT+TGG | + | chr2_3:48722559-48722578 | Msa0295900:intron | 30.0% |
| GCAAGAAAAAAGAAGTTGAA+AGG | + | chr2_3:48722699-48722718 | Msa0295900:intron | 30.0% | |
| !! | TAACTTGCTGTTAACAATCA+TGG | + | chr2_3:48722771-48722790 | Msa0295900:intron | 30.0% |
| !!! | CAATCATGGTTTTATATGCT+TGG | + | chr2_3:48722785-48722804 | Msa0295900:intron | 30.0% |
| ! | TTTGAAACAATAAGCTTGCT+TGG | - | chr2_3:48722987-48723006 | None:intergenic | 30.0% |
| AAACTTTCAGTCATGTTTCA+TGG | + | chr2_3:48723004-48723023 | Msa0295900:intron | 30.0% | |
| AACTTTCAGTCATGTTTCAT+GGG | + | chr2_3:48723005-48723024 | Msa0295900:intron | 30.0% | |
| GGGTTGAAATACTTTATATG+AGG | - | chr2_3:48723263-48723282 | None:intergenic | 30.0% | |
| TTAATTATCCGTGAAAGACA+AGG | - | chr2_3:48723631-48723650 | None:intergenic | 30.0% | |
| CACTGTAACAACTAATTTGA+TGG | + | chr2_3:48723690-48723709 | Msa0295900:intron | 30.0% | |
| AAATCAGTAAATGTCCACTT+TGG | - | chr2_3:48723794-48723813 | None:intergenic | 30.0% | |
| ATTTAACTGAAGCAGACATT+AGG | + | chr2_3:48723912-48723931 | Msa0295900:intron | 30.0% | |
| ! | TTTTCTTTTTCTTCCTTCCT+TGG | + | chr2_3:48724111-48724130 | Msa0295900:intron | 30.0% |
| GTAATGTATGAAAACATCCA+AGG | - | chr2_3:48724131-48724150 | None:intergenic | 30.0% | |
| ! | TGAAATTTGCAATAAGTTGG+TGG | + | chr2_3:48724317-48724336 | Msa0295900:CDS | 30.0% |
| ATGTTCTCCTCAAAAAGAAA+AGG | - | chr2_3:48724367-48724386 | None:intergenic | 30.0% | |
| GATTTAATATGTTGCCATTC+AGG | + | chr2_3:48724595-48724614 | Msa0295900:intron | 30.0% | |
| AGTAACAACTTATGATGTTG+AGG | + | chr2_3:48724721-48724740 | Msa0295900:CDS | 30.0% | |
| !! | TATTTTCTGGGAAATTGACA+TGG | - | chr2_3:48724862-48724881 | None:intergenic | 30.0% |
| !! | TGTTTTTATCATGTCAAGCA+TGG | + | chr2_3:48724899-48724918 | Msa0295900:CDS | 30.0% |
| CTGGAAAAATGGAATTTGAT+GGG | - | chr2_3:48725013-48725032 | None:intergenic | 30.0% | |
| ACTGGAAAAATGGAATTTGA+TGG | - | chr2_3:48725014-48725033 | None:intergenic | 30.0% | |
| !! | ATCAAATTCCATTTTTCCAG+TGG | + | chr2_3:48725013-48725032 | Msa0295900:intron | 30.0% |
| TGCTAAAGAAGATATCATTG+CGG | + | chr2_3:48725070-48725089 | Msa0295900:CDS | 30.0% | |
| TTCGTAATAACCAGATCAAA+AGG | + | chr2_3:48725105-48725124 | Msa0295900:CDS | 30.0% | |
| TGATTACACTATAACCTTTC+AGG | + | chr2_3:48725392-48725411 | Msa0295900:intron | 30.0% | |
| !!! | AATGGCTTTTGTTTTCGAAT+AGG | + | chr2_3:48725506-48725525 | Msa0295900:intron | 30.0% |
| !! | TTTCAACTTAAAAGGCATTG+TGG | - | chr2_3:48725535-48725554 | None:intergenic | 30.0% |
| AATTACACTAGAGGAACATT+TGG | - | chr2_3:48725661-48725680 | None:intergenic | 30.0% | |
| !!! | TAGTCTCACTATTTTGGAAT+TGG | + | chr2_3:48725764-48725783 | Msa0295900:intron | 30.0% |
| TCTTTACAATACTCTTCCAT+TGG | - | chr2_3:48725842-48725861 | None:intergenic | 30.0% | |
| TCAAGAGCTAAATCATCTAA+TGG | + | chr2_3:48725941-48725960 | Msa0295900:intron | 30.0% | |
| !!! | CTGTTTTAGTTGATCTTATC+AGG | + | chr2_3:48725989-48726008 | Msa0295900:CDS | 30.0% |
| !! | TTTTAGTTGATCTTATCAGG+AGG | + | chr2_3:48725992-48726011 | Msa0295900:CDS | 30.0% |
| TTTAGTTGATCTTATCAGGA+GGG | + | chr2_3:48725993-48726012 | Msa0295900:CDS | 30.0% | |
| ! | CACATCCGTATATATCATTT+TGG | + | chr2_3:48726082-48726101 | Msa0295900:CDS | 30.0% |
| !!! | GCATCATTCTCTCTATTTTT+TGG | + | chr2_3:48726278-48726297 | Msa0295900:intron | 30.0% |
| GTATTAATGACAGAATCTGA+AGG | + | chr2_3:48726388-48726407 | Msa0295900:CDS | 30.0% | |
| CTTATTATAGTGTCAAAGAG+TGG | + | chr2_3:48726435-48726454 | Msa0295900:intron | 30.0% | |
| TCTTGAGATTAATTGGAGCA+AGG | + | chr2_3:48721197-48721216 | Msa0295900:CDS | 35.0% | |
| CTTGAGATTAATTGGAGCAA+GGG | + | chr2_3:48721198-48721217 | Msa0295900:CDS | 35.0% | |
| ! | TTCTCAATTGGTTCAACTCA+TGG | + | chr2_3:48721248-48721267 | Msa0295900:intron | 35.0% |
| TCATATTATCTAAGCGCTCT+TGG | + | chr2_3:48721449-48721468 | Msa0295900:intron | 35.0% | |
| CATATTATCTAAGCGCTCTT+GGG | + | chr2_3:48721450-48721469 | Msa0295900:intron | 35.0% | |
| AAGTCATCGAATATTACCAC+CGG | + | chr2_3:48721774-48721793 | Msa0295900:intron | 35.0% | |
| CCTAAATTGTTCAATCGATC+CGG | - | chr2_3:48721796-48721815 | None:intergenic | 35.0% | |
| CGGATCGATTGAACAATTTA+GGG | + | chr2_3:48721794-48721813 | Msa0295900:intron | 35.0% | |
| ATCTGCGTTGGAAATAGATT+GGG | - | chr2_3:48721886-48721905 | None:intergenic | 35.0% | |
| TATCTGCGTTGGAAATAGAT+TGG | - | chr2_3:48721887-48721906 | None:intergenic | 35.0% | |
| !!! | GGATATAGTTTTATCTGCGT+TGG | - | chr2_3:48721898-48721917 | None:intergenic | 35.0% |
| CCAAACAAAGCAGTAATCAA+AGG | - | chr2_3:48722204-48722223 | None:intergenic | 35.0% | |
| ! | CCTTTGATTACTGCTTTGTT+TGG | + | chr2_3:48722201-48722220 | Msa0295900:intron | 35.0% |
| CCGATAACAAACTTTGGTAA+TGG | - | chr2_3:48722481-48722500 | None:intergenic | 35.0% | |
| TGATTCTTGAGCATAGAATC+AGG | + | chr2_3:48722531-48722550 | Msa0295900:intron | 35.0% | |
| GATTCTTGAGCATAGAATCA+GGG | + | chr2_3:48722532-48722551 | Msa0295900:intron | 35.0% | |
| !! | TATTTGACTTGTTGGAGACT+TGG | + | chr2_3:48722567-48722586 | Msa0295900:intron | 35.0% |
| CAGCATCTGATAAAGAATCA+AGG | - | chr2_3:48722873-48722892 | None:intergenic | 35.0% | |
| AGTCATGTTTCATGGGTATT+TGG | + | chr2_3:48723012-48723031 | Msa0295900:intron | 35.0% | |
| TTTGTACTCGAGGAGTTTAT+CGG | + | chr2_3:48723085-48723104 | Msa0295900:intron | 35.0% | |
| ! | CAAGTCACAAACACTTTTGT+AGG | - | chr2_3:48723224-48723243 | None:intergenic | 35.0% |
| TGAGCTTGAAAGTTTATGTG+GGG | - | chr2_3:48723285-48723304 | None:intergenic | 35.0% | |
| GTGAGCTTGAAAGTTTATGT+GGG | - | chr2_3:48723286-48723305 | None:intergenic | 35.0% | |
| TGTGAGCTTGAAAGTTTATG+TGG | - | chr2_3:48723287-48723306 | None:intergenic | 35.0% | |
| !! | TGATCGTTAGTTGATTTGAC+AGG | + | chr2_3:48723354-48723373 | Msa0295900:intron | 35.0% |
| AGTTGTTGACAATCTTTCCA+TGG | + | chr2_3:48723378-48723397 | Msa0295900:CDS | 35.0% | |
| TGGCATTTCAACTTCTTGTT+TGG | + | chr2_3:48723429-48723448 | Msa0295900:CDS | 35.0% | |
| ! | TTCAACTTCTTGTTTGGACA+TGG | + | chr2_3:48723435-48723454 | Msa0295900:CDS | 35.0% |
| GATCAGTTTATAGCGAAATG+TGG | + | chr2_3:48723472-48723491 | Msa0295900:CDS | 35.0% | |
| CCTAAAAGGATGAAACTGAT+GGG | - | chr2_3:48723656-48723675 | None:intergenic | 35.0% | |
| ! | CCATCAGTTTCATCCTTTTA+GGG | + | chr2_3:48723654-48723673 | Msa0295900:intron | 35.0% |
| ACATCAAATCAGTCCCTAAA+AGG | - | chr2_3:48723670-48723689 | None:intergenic | 35.0% | |
| ATGGCATGTGACATTAATGA+GGG | + | chr2_3:48723709-48723728 | Msa0295900:intron | 35.0% | |
| TAAATGGAAGACTTACCAGA+TGG | + | chr2_3:48723750-48723769 | Msa0295900:intron | 35.0% | |
| !! | TTTATCTTTGGAGTCCAAAG+TGG | + | chr2_3:48723777-48723796 | Msa0295900:intron | 35.0% |
| ACATTAGCAAGGAAATGACA+AGG | - | chr2_3:48724074-48724093 | None:intergenic | 35.0% | |
| ! | TGTCATTTCCTTGCTAATGT+AGG | + | chr2_3:48724074-48724093 | Msa0295900:intron | 35.0% |
| GTCATTTCCTTGCTAATGTA+GGG | + | chr2_3:48724075-48724094 | Msa0295900:intron | 35.0% | |
| TGTATGAAAACATCCAAGGA+AGG | - | chr2_3:48724127-48724146 | None:intergenic | 35.0% | |
| TTCATGGAAGGTTGTACATT+TGG | + | chr2_3:48724233-48724252 | Msa0295900:CDS | 35.0% | |
| AGATAAAACAGTGAGTAACG+TGG | - | chr2_3:48724565-48724584 | None:intergenic | 35.0% | |
| TCACGAATTTCATCGAATTG+TGG | + | chr2_3:48724680-48724699 | Msa0295900:CDS | 35.0% | |
| !! | AAGAGTACTACCTCCAAAAA+CGG | - | chr2_3:48724759-48724778 | None:intergenic | 35.0% |
| !! | TTTTTGGAGGTAGTACTCTT+AGG | + | chr2_3:48724759-48724778 | Msa0295900:intron | 35.0% |
| AATGAAATGCATAGCGCAAA+AGG | - | chr2_3:48724982-48725001 | None:intergenic | 35.0% | |
| !! | ATTCCATTTTTCCAGTGGTT+TGG | + | chr2_3:48725018-48725037 | Msa0295900:intron | 35.0% |
| !! | TTCCATTTTTCCAGTGGTTT+GGG | + | chr2_3:48725019-48725038 | Msa0295900:intron | 35.0% |
| GTAATAACCAGATCAAAAGG+TGG | + | chr2_3:48725108-48725127 | Msa0295900:CDS | 35.0% | |
| ! | CACATGTACTTTCCTTTTCT+AGG | + | chr2_3:48725150-48725169 | Msa0295900:CDS | 35.0% |
| TTCTTGATTAGCATCACAGA+TGG | + | chr2_3:48725206-48725225 | Msa0295900:CDS | 35.0% | |
| TGCAGAGCTGATAAAAGATT+TGG | - | chr2_3:48725284-48725303 | None:intergenic | 35.0% | |
| ! | AAATCTTTTATCAGCTCTGC+AGG | + | chr2_3:48725283-48725302 | Msa0295900:CDS | 35.0% |
| ATGAGAAACAAACTGAAGTC+AGG | - | chr2_3:48725319-48725338 | None:intergenic | 35.0% | |
| AACCTTTCAGGCTGTTATAT+TGG | + | chr2_3:48725404-48725423 | Msa0295900:intron | 35.0% | |
| !! | GGGAATTATTTCTGTGTTCT+AGG | - | chr2_3:48725449-48725468 | None:intergenic | 35.0% |
| ! | AATTCCCTTGCTGTGTTAAA+AGG | + | chr2_3:48725462-48725481 | Msa0295900:CDS | 35.0% |
| GAGTTTCCACTACTATACAA+TGG | + | chr2_3:48725488-48725507 | Msa0295900:CDS | 35.0% | |
| CAAAAGCCATTGTATAGTAG+TGG | - | chr2_3:48725497-48725516 | None:intergenic | 35.0% | |
| TATGCACTCTTGTTACTCAA+AGG | + | chr2_3:48725575-48725594 | Msa0295900:intron | 35.0% | |
| TAGCAAGAGAATTACACTAG+AGG | - | chr2_3:48725670-48725689 | None:intergenic | 35.0% | |
| AGAGCTAAATCATCTAATGG+TGG | + | chr2_3:48725944-48725963 | Msa0295900:intron | 35.0% | |
| !!! | TGTTGGACATTTTTTGCTAC+TGG | - | chr2_3:48726048-48726067 | None:intergenic | 35.0% |
| GGAGCCCAAAATGATATATA+CGG | - | chr2_3:48726090-48726109 | None:intergenic | 35.0% | |
| TTAGTACTAAAACCTCCACA+AGG | + | chr2_3:48726132-48726151 | Msa0295900:CDS | 35.0% | |
| TAGTACTAAAACCTCCACAA+GGG | + | chr2_3:48726133-48726152 | Msa0295900:CDS | 35.0% | |
| GGAACAATTAGCAATTCAAG+CGG | - | chr2_3:48726491-48726510 | None:intergenic | 35.0% | |
| ATCAAGGAGCAATTTACTCA+AGG | + | chr2_3:48726641-48726660 | Msa0295900:CDS | 35.0% | |
| TTGGTTGTTCAACTGACAAC+TGG | + | chr2_3:48721330-48721349 | Msa0295900:intron | 40.0% | |
| ATTGTATCGGATTGTAACCC+CGG | - | chr2_3:48721739-48721758 | None:intergenic | 40.0% | |
| AAATTGTTCAATCGATCCGG+TGG | - | chr2_3:48721793-48721812 | None:intergenic | 40.0% | |
| CCGGATCGATTGAACAATTT+AGG | + | chr2_3:48721793-48721812 | Msa0295900:intron | 40.0% | |
| TAGCAATCACCGTCATACTT+AGG | + | chr2_3:48721824-48721843 | Msa0295900:intron | 40.0% | |
| ! | TACCCTAGTCGTGTTCTTTT+TGG | + | chr2_3:48721947-48721966 | Msa0295900:intron | 40.0% |
| TGCCAAAAAGAACACGACTA+GGG | - | chr2_3:48721952-48721971 | None:intergenic | 40.0% | |
| !! | TCGTGTTCTTTTTGGCAGTT+GGG | + | chr2_3:48721955-48721974 | Msa0295900:intron | 40.0% |
| ATCATGTCTGTATGCTCAGA+GGG | + | chr2_3:48722023-48722042 | Msa0295900:intron | 40.0% | |
| GGTATGCCGATAACAAACTT+TGG | - | chr2_3:48722487-48722506 | None:intergenic | 40.0% | |
| TATCGGCATACCACATTTAG+AGG | + | chr2_3:48722495-48722514 | Msa0295900:intron | 40.0% | |
| GCTATCTGCTAGAAGTTAAC+AGG | + | chr2_3:48722649-48722668 | Msa0295900:intron | 40.0% | |
| CACATAAGCTCTATTTCGCA+AGG | - | chr2_3:48722679-48722698 | None:intergenic | 40.0% | |
| CTTGCGAAATAGAGCTTATG+TGG | + | chr2_3:48722677-48722696 | Msa0295900:intron | 40.0% | |
| TGAACTTCAACATTCTCTCG+AGG | + | chr2_3:48722816-48722835 | Msa0295900:CDS | 40.0% | |
| !! | ATTTGACAAGCTCTGAGATG+AGG | - | chr2_3:48722849-48722868 | None:intergenic | 40.0% |
| TCTTCTTTATGTCCACTGTC+TGG | - | chr2_3:48722907-48722926 | None:intergenic | 40.0% | |
| AGCTTGAAAGTTTATGTGGG+GGG | - | chr2_3:48723283-48723302 | None:intergenic | 40.0% | |
| GAGCTTGAAAGTTTATGTGG+GGG | - | chr2_3:48723284-48723303 | None:intergenic | 40.0% | |
| !! | GCAAACTTTGAAACAGCGTT+TGG | - | chr2_3:48723409-48723428 | None:intergenic | 40.0% |
| ! | AACGCTGTTTCAAAGTTTGC+TGG | + | chr2_3:48723409-48723428 | Msa0295900:CDS | 40.0% |
| ! | AGATTGGTCCTTGTCTTTCA+CGG | + | chr2_3:48723620-48723639 | Msa0295900:intron | 40.0% |
| ! | CCCATCAGTTTCATCCTTTT+AGG | + | chr2_3:48723653-48723672 | Msa0295900:intron | 40.0% |
| CCCTAAAAGGATGAAACTGA+TGG | - | chr2_3:48723657-48723676 | None:intergenic | 40.0% | |
| GATGGCATGTGACATTAATG+AGG | + | chr2_3:48723708-48723727 | Msa0295900:intron | 40.0% | |
| CCAAAGATAAATGTGCCATC+TGG | - | chr2_3:48723768-48723787 | None:intergenic | 40.0% | |
| CCAGATGGCACATTTATCTT+TGG | + | chr2_3:48723765-48723784 | Msa0295900:intron | 40.0% | |
| AGCATTATCCCTCCTTTATC+AGG | + | chr2_3:48723954-48723973 | Msa0295900:CDS | 40.0% | |
| GCATTATCCCTCCTTTATCA+GGG | + | chr2_3:48723955-48723974 | Msa0295900:CDS | 40.0% | |
| TTGAGATCCCTGATAAAGGA+GGG | - | chr2_3:48723965-48723984 | None:intergenic | 40.0% | |
| ! | TTTGAGATCCCTGATAAAGG+AGG | - | chr2_3:48723966-48723985 | None:intergenic | 40.0% |
| TCCTTTATCAGGGATCTCAA+AGG | + | chr2_3:48723965-48723984 | Msa0295900:CDS | 40.0% | |
| CCTTTATCAGGGATCTCAAA+GGG | + | chr2_3:48723966-48723985 | Msa0295900:CDS | 40.0% | |
| TTCAAAGCCCTACATTAGCA+AGG | - | chr2_3:48724085-48724104 | None:intergenic | 40.0% | |
| ! | TTGCTAATGTAGGGCTTTGA+AGG | + | chr2_3:48724084-48724103 | Msa0295900:intron | 40.0% |
| CATATAGACCAAGAAGAGCT+CGG | - | chr2_3:48724468-48724487 | None:intergenic | 40.0% | |
| TCTATATGTCCTGCAATGCT+TGG | + | chr2_3:48724480-48724499 | Msa0295900:CDS | 40.0% | |
| AAACAGTGAGTAACGTGGAT+GGG | - | chr2_3:48724560-48724579 | None:intergenic | 40.0% | |
| AAAACAGTGAGTAACGTGGA+TGG | - | chr2_3:48724561-48724580 | None:intergenic | 40.0% | |
| ACTTGAAAGAAGAGCCTGAA+TGG | - | chr2_3:48724612-48724631 | None:intergenic | 40.0% | |
| AGTACTAGCGAATGGTAACT+GGG | - | chr2_3:48724653-48724672 | None:intergenic | 40.0% | |
| AACTTATGATGTTGAGGCTG+TGG | + | chr2_3:48724727-48724746 | Msa0295900:CDS | 40.0% | |
| GCAGGTTAGAGTTAGGAATT+AGG | + | chr2_3:48724932-48724951 | Msa0295900:intron | 40.0% | |
| !! | TCCATTTTTCCAGTGGTTTG+GGG | + | chr2_3:48725020-48725039 | Msa0295900:intron | 40.0% |
| ATCAAAAGGTGGCAAGCAAT+AGG | + | chr2_3:48725119-48725138 | Msa0295900:CDS | 40.0% | |
| TCAAAAGGTGGCAAGCAATA+GGG | + | chr2_3:48725120-48725139 | Msa0295900:CDS | 40.0% | |
| TGGCATATAAGATGACCACT+GGG | - | chr2_3:48725264-48725283 | None:intergenic | 40.0% | |
| TTGGCATATAAGATGACCAC+TGG | - | chr2_3:48725265-48725284 | None:intergenic | 40.0% | |
| AGCCAATATAACAGCCTGAA+AGG | - | chr2_3:48725409-48725428 | None:intergenic | 40.0% | |
| ! | GGCTGTTATATTGGCTATCA+TGG | + | chr2_3:48725413-48725432 | Msa0295900:intron | 40.0% |
| TGCTAGCATTTATCTTCTCG+AGG | + | chr2_3:48725685-48725704 | Msa0295900:intron | 40.0% | |
| ! | GTGCTTCGTTATTAGTCTGT+TGG | - | chr2_3:48726065-48726084 | None:intergenic | 40.0% |
| TCCACCAACTCAAAGACATT+GGG | - | chr2_3:48726111-48726130 | None:intergenic | 40.0% | |
| TTCCACCAACTCAAAGACAT+TGG | - | chr2_3:48726112-48726131 | None:intergenic | 40.0% | |
| AGTACTAAAACCTCCACAAG+GGG | + | chr2_3:48726134-48726153 | Msa0295900:CDS | 40.0% | |
| GCATTATGTTTACAACCTGC+AGG | + | chr2_3:48726336-48726355 | Msa0295900:intron | 40.0% | |
| ACAGGAAAGACAAACTACAC+TGG | + | chr2_3:48726612-48726631 | Msa0295900:intron | 40.0% | |
| ! | ACTACACTGGAGTCTTATCA+AGG | + | chr2_3:48726625-48726644 | Msa0295900:CDS | 40.0% |
| TACTCAAGGTCTACAACGAA+TGG | + | chr2_3:48726655-48726674 | Msa0295900:CDS | 40.0% | |
| TGTCATTATACCTGTCACTC+GGG | - | chr2_3:48726697-48726716 | None:intergenic | 40.0% | |
| CTGTCATTATACCTGTCACT+CGG | - | chr2_3:48726698-48726717 | None:intergenic | 40.0% | |
| CGACCTAAATCCACTTGAAA+TGG | + | chr2_3:48726737-48726756 | Msa0295900:CDS | 40.0% | |
| ! | GCACCATTTCAAGTGGATTT+AGG | - | chr2_3:48726743-48726762 | None:intergenic | 40.0% |
| TTGGAGCAAGGGATTTCGTA+AGG | + | chr2_3:48721209-48721228 | Msa0295900:CDS | 45.0% | |
| CAACTCATGGCTCTTGAGAT+TGG | + | chr2_3:48721261-48721280 | Msa0295900:intron | 45.0% | |
| ! | CTGGAGCAAGGGATTTTGTA+AGG | + | chr2_3:48721284-48721303 | Msa0295900:intron | 45.0% |
| GTTGTTCAACTGACAACTGG+TGG | + | chr2_3:48721333-48721352 | Msa0295900:intron | 45.0% | |
| CTGCCAAAAAGAACACGACT+AGG | - | chr2_3:48721953-48721972 | None:intergenic | 45.0% | |
| !! | GTCGTGTTCTTTTTGGCAGT+TGG | + | chr2_3:48721954-48721973 | Msa0295900:intron | 45.0% |
| AGAGAGTGAAAACCGCTTCT+TGG | - | chr2_3:48721996-48722015 | None:intergenic | 45.0% | |
| CATCATGTCTGTATGCTCAG+AGG | + | chr2_3:48722022-48722041 | Msa0295900:intron | 45.0% | |
| GGAGACTTGGAGTGAAAGTA+AGG | + | chr2_3:48722580-48722599 | Msa0295900:intron | 45.0% | |
| ! | AAGCTTGCTTGGTCAAGAGA+CGG | - | chr2_3:48722976-48722995 | None:intergenic | 45.0% |
| !! | CCCTTTGAGATCCCTGATAA+AGG | - | chr2_3:48723969-48723988 | None:intergenic | 45.0% |
| GATGTCTTTGACAGAGCTGT+TGG | + | chr2_3:48724276-48724295 | Msa0295900:CDS | 45.0% | |
| CAGTACTAGCGAATGGTAAC+TGG | - | chr2_3:48724654-48724673 | None:intergenic | 45.0% | |
| ACAGTTGCAGTACTAGCGAA+TGG | - | chr2_3:48724661-48724680 | None:intergenic | 45.0% | |
| ! | GCTGTGGTTAGTACCGTTTT+TGG | + | chr2_3:48724743-48724762 | Msa0295900:CDS | 45.0% |
| !! | GTGGTTAGTACCGTTTTTGG+AGG | + | chr2_3:48724746-48724765 | Msa0295900:CDS | 45.0% |
| CTAACTCTAACCTGCAAGAG+CGG | - | chr2_3:48724927-48724946 | None:intergenic | 45.0% | |
| AATGCATAGCGCAAAAGGCA+AGG | - | chr2_3:48724977-48724996 | None:intergenic | 45.0% | |
| !! | CCATTTTTCCAGTGGTTTGG+GGG | + | chr2_3:48725021-48725040 | Msa0295900:intron | 45.0% |
| ! | TTGCTTGCCACCTTTTGATC+TGG | - | chr2_3:48725118-48725137 | None:intergenic | 45.0% |
| ! | TTTCCTTTTCTAGGCTGACG+TGG | + | chr2_3:48725159-48725178 | Msa0295900:CDS | 45.0% |
| ! | TTCCTTTTCTAGGCTGACGT+GGG | + | chr2_3:48725160-48725179 | Msa0295900:CDS | 45.0% |
| ATCACAGATGGAGATATCCG+TGG | + | chr2_3:48725218-48725237 | Msa0295900:CDS | 45.0% | |
| ATGGAGATATCCGTGGAAAC+TGG | + | chr2_3:48725225-48725244 | Msa0295900:CDS | 45.0% | |
| TGGAGATATCCGTGGAAACT+GGG | + | chr2_3:48725226-48725245 | Msa0295900:CDS | 45.0% | |
| GTACATCATCCCAGTTTCCA+CGG | - | chr2_3:48725238-48725257 | None:intergenic | 45.0% | |
| ! | CGCTCCTTTTAACACAGCAA+GGG | - | chr2_3:48725469-48725488 | None:intergenic | 45.0% |
| ! | TCGCTCCTTTTAACACAGCA+AGG | - | chr2_3:48725470-48725489 | None:intergenic | 45.0% |
| !! | TCCCAATGTCTTTGAGTTGG+TGG | + | chr2_3:48726107-48726126 | Msa0295900:CDS | 45.0% |
| GTACTAAAACCTCCACAAGG+GGG | + | chr2_3:48726135-48726154 | Msa0295900:CDS | 45.0% | |
| !! | CACTTGAAATGGTGCTGTCT+CGG | + | chr2_3:48726748-48726767 | Msa0295900:CDS | 45.0% |
| TCATGGCTCTTGAGATTGGC+TGG | + | chr2_3:48721265-48721284 | Msa0295900:intron | 50.0% | |
| ! | TCTTGAGATTGGCTGGAGCA+AGG | + | chr2_3:48721272-48721291 | Msa0295900:intron | 50.0% |
| ! | CTTGAGATTGGCTGGAGCAA+GGG | + | chr2_3:48721273-48721292 | Msa0295900:intron | 50.0% |
| CTTCTCCAGTGACCAAGAAG+CGG | + | chr2_3:48721981-48722000 | Msa0295900:intron | 50.0% | |
| GAAAACCGCTTCTTGGTCAC+TGG | - | chr2_3:48721989-48722008 | None:intergenic | 50.0% | |
| ATCGGTGCAAACTCTGCATG+AGG | + | chr2_3:48723103-48723122 | Msa0295900:intron | 50.0% | |
| AACAGCGTTTGGCAGTTCCA+TGG | - | chr2_3:48723398-48723417 | None:intergenic | 50.0% | |
| CAGTCCTTATCTCTACCCAG+AGG | + | chr2_3:48724166-48724185 | Msa0295900:intron | 50.0% | |
| GTTCTCAAACTGACGCCTCT+GGG | - | chr2_3:48724184-48724203 | None:intergenic | 50.0% | |
| GAGAAACTCCGAGCTCTTCT+TGG | + | chr2_3:48724457-48724476 | Msa0295900:CDS | 50.0% | |
| ! | GAGCAACAACCAAGCATTGC+AGG | - | chr2_3:48724492-48724511 | None:intergenic | 50.0% |
| CGCTCTTGCAGGTTAGAGTT+AGG | + | chr2_3:48724925-48724944 | Msa0295900:intron | 50.0% | |
| CCCCCAAACCACTGGAAAAA+TGG | - | chr2_3:48725024-48725043 | None:intergenic | 50.0% | |
| GGGATGATGTACATTCCCAG+TGG | + | chr2_3:48725246-48725265 | Msa0295900:CDS | 50.0% | |
| GGCTCCCAATGTCTTTGAGT+TGG | + | chr2_3:48726104-48726123 | Msa0295900:CDS | 50.0% | |
| TGAGAACTGACAACACCTGC+AGG | - | chr2_3:48726354-48726373 | None:intergenic | 50.0% | |
| CGAGACAGCACCATTTCAAG+TGG | - | chr2_3:48726750-48726769 | None:intergenic | 50.0% | |
| GCACTCTCTGATCCAGACAG+TGG | + | chr2_3:48722892-48722911 | Msa0295900:CDS | 55.0% | |
| GACGCCTCTGGGTAGAGATA+AGG | - | chr2_3:48724173-48724192 | None:intergenic | 55.0% | |
| CGTTCTCAAACTGACGCCTC+TGG | - | chr2_3:48724185-48724204 | None:intergenic | 55.0% | |
| !! | AAGCATGGTGCCGCTCTTGC+AGG | + | chr2_3:48724914-48724933 | Msa0295900:CDS | 60.0% |
| GAGACATGCCCCCAAACCAC+TGG | - | chr2_3:48725032-48725051 | None:intergenic | 60.0% | |
| ! | GGTTTGGGGGCATGTCTCAG+AGG | + | chr2_3:48725034-48725053 | Msa0295900:CDS | 60.0% |
| CGCCCACGTCAGCCTAGAAA+AGG | - | chr2_3:48725165-48725184 | None:intergenic | 60.0% | |
| GAAGGTGATCCCCCTTGTGG+AGG | - | chr2_3:48726147-48726166 | None:intergenic | 60.0% | |
| AGGGAAGGTGATCCCCCTTG+TGG | - | chr2_3:48726150-48726169 | None:intergenic | 60.0% | |
| TCACGCTGCTCAGGTAGGGA+AGG | - | chr2_3:48726165-48726184 | None:intergenic | 60.0% | |
| CGCATCACGCTGCTCAGGTA+GGG | - | chr2_3:48726169-48726188 | None:intergenic | 60.0% | |
| CCTACCTGAGCAGCGTGATG+CGG | + | chr2_3:48726167-48726186 | Msa0295900:CDS | 60.0% | |
| CCTGTCACTCGGGTCTGCAA+AGG | - | chr2_3:48726687-48726706 | None:intergenic | 60.0% | |
| CCTTTGCAGACCCGAGTGAC+AGG | + | chr2_3:48726684-48726703 | Msa0295900:CDS | 60.0% | |
| CCGCATCACGCTGCTCAGGT+AGG | - | chr2_3:48726170-48726189 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 48721192 | 48726812 | 48721192 | ID=Msa0295900;Name=Msa0295900 |
| chr2_3 | mRNA | 48721192 | 48726812 | 48721192 | ID=Msa0295900-mRNA-1;Parent=Msa0295900;Name=Msa0295900-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0|0|0.92|1|1|13|0|547 |
| chr2_3 | exon | 48721192 | 48721230 | 48721192 | ID=Msa0295900-mRNA-1:exon:15299;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48722811 | 48722933 | 48722811 | ID=Msa0295900-mRNA-1:exon:15300;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48723376 | 48723525 | 48723376 | ID=Msa0295900-mRNA-1:exon:15301;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48723924 | 48723987 | 48723924 | ID=Msa0295900-mRNA-1:exon:15302;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48724169 | 48724338 | 48724169 | ID=Msa0295900-mRNA-1:exon:15303;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48724442 | 48724501 | 48724442 | ID=Msa0295900-mRNA-1:exon:15304;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48724617 | 48724767 | 48724617 | ID=Msa0295900-mRNA-1:exon:15305;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48724876 | 48724935 | 48724876 | ID=Msa0295900-mRNA-1:exon:15306;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48725033 | 48725304 | 48725033 | ID=Msa0295900-mRNA-1:exon:15307;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48725414 | 48725515 | 48725414 | ID=Msa0295900-mRNA-1:exon:15308;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48725985 | 48726188 | 48725985 | ID=Msa0295900-mRNA-1:exon:15309;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48726358 | 48726409 | 48726358 | ID=Msa0295900-mRNA-1:exon:15310;Parent=Msa0295900-mRNA-1 |
| chr2_3 | exon | 48726616 | 48726812 | 48726616 | ID=Msa0295900-mRNA-1:exon:15311;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48721192 | 48721230 | 48721192 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48722811 | 48722933 | 48722811 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48723376 | 48723525 | 48723376 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48723924 | 48723987 | 48723924 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48724169 | 48724338 | 48724169 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48724442 | 48724501 | 48724442 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48724617 | 48724767 | 48724617 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48724876 | 48724935 | 48724876 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48725033 | 48725304 | 48725033 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48725414 | 48725515 | 48725414 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48725985 | 48726188 | 48725985 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48726358 | 48726409 | 48726358 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| chr2_3 | CDS | 48726616 | 48726812 | 48726616 | ID=Msa0295900-mRNA-1:cds;Parent=Msa0295900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
