Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296090 | XP_003596489.2 | 97.820 | 688 | 14 | 1 | 1 | 687 | 1 | 688 | 0.0 | 1392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296090 | sp|Q7T0Q5|NOL10_XENLA | 42.857 | 532 | 278 | 9 | 8 | 532 | 1 | 513 | 6.63e-148 | 449 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296090 | G7IR59 | 97.820 | 688 | 14 | 1 | 1 | 687 | 1 | 688 | 0.0 | 1392 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0216890 | Msa0296090 | 0.917657 | 4.064569e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296090 | MtrunA17_Chr2g0318511 | 97.820 | 688 | 14 | 1 | 1 | 687 | 1 | 688 | 0.0 | 1392 |
| Msa0296090 | MtrunA17_Chr8g0336281 | 93.878 | 49 | 3 | 0 | 371 | 419 | 1 | 49 | 8.27e-27 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296090 | AT3G56990.1 | 62.069 | 667 | 244 | 4 | 8 | 666 | 8 | 673 | 0.0 | 800 |
| Msa0296090 | AT3G56990.3 | 63.402 | 582 | 206 | 3 | 1 | 576 | 1 | 581 | 0.0 | 713 |
| Msa0296090 | AT3G56990.2 | 66.341 | 511 | 171 | 1 | 1 | 511 | 1 | 510 | 0.0 | 673 |
Find 205 sgRNAs with CRISPR-Local
Find 725 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATGAATCAAACAATTTA+AGG | 0.101483 | 2_3:-48954932 | None:intergenic |
| GCCATTTACATTTATGTATA+TGG | 0.199837 | 2_3:-48954619 | None:intergenic |
| TAAAGCTATATTTACAAATA+AGG | 0.230806 | 2_3:+48953401 | Msa0296090:CDS |
| GAGAGGTGTTCGTAGGGTTT+AGG | 0.231641 | 2_3:-48943404 | None:intergenic |
| GCTTCAGGAATTTGAGATTA+AGG | 0.244177 | 2_3:+48953820 | Msa0296090:intron |
| AGCAGCATGCAGAGGCATTT+TGG | 0.250491 | 2_3:+48954269 | Msa0296090:CDS |
| CAGATCTTGCCTGATCTTTA+CGG | 0.257777 | 2_3:+48954653 | Msa0296090:three_prime_UTR |
| AACAACCTTCACTTGCTTCA+TGG | 0.261438 | 2_3:+48943588 | Msa0296090:CDS |
| TAATTATAAATTATACAAAA+AGG | 0.262295 | 2_3:+48951681 | Msa0296090:CDS |
| ATAAATCTACATGCAAAATA+TGG | 0.269280 | 2_3:+48945674 | Msa0296090:CDS |
| ATGTAGGATGTATGAAATTA+AGG | 0.283564 | 2_3:+48954243 | Msa0296090:intron |
| ACCATATACATAAATGTAAA+TGG | 0.284910 | 2_3:+48954618 | Msa0296090:three_prime_UTR |
| TGGTGATGGGGACTTCTTAA+TGG | 0.294184 | 2_3:+48948613 | Msa0296090:CDS |
| TGATAATAAATAGAAGTTAA+TGG | 0.300498 | 2_3:-48954964 | None:intergenic |
| AATGGCCGTGGGCGTGGCCG+TGG | 0.307651 | 2_3:+48954538 | Msa0296090:CDS |
| ATCTATATCATCTTCATTGT+AGG | 0.311074 | 2_3:-48954446 | None:intergenic |
| ATTAAAGTTTGAACGACATT+TGG | 0.312393 | 2_3:+48944824 | Msa0296090:CDS |
| ATAAACATGTCGTTAGGATA+TGG | 0.314251 | 2_3:+48949400 | Msa0296090:CDS |
| TATGTATTCTTTACCCATTT+CGG | 0.316415 | 2_3:+48954897 | Msa0296090:three_prime_UTR |
| TGAAGATGTTGAAACTAAAA+AGG | 0.328340 | 2_3:+48953326 | Msa0296090:CDS |
| AGAGGTGTTCGTAGGGTTTA+GGG | 0.331019 | 2_3:-48943403 | None:intergenic |
| GTATGATGTAAGATGGTATT+TGG | 0.332590 | 2_3:-48951379 | None:intergenic |
| TAACCTTCACTTCGAGAAAC+AGG | 0.336840 | 2_3:+48954419 | Msa0296090:CDS |
| CGTAAAGATCAGGCAAGATC+TGG | 0.337143 | 2_3:-48954652 | None:intergenic |
| GGCCGTGGGCGTGGCCGTGG+GGG | 0.339582 | 2_3:+48954541 | Msa0296090:CDS |
| TTCTAGAGAAGAACACCATT+TGG | 0.353343 | 2_3:-48951420 | None:intergenic |
| TGCCTGATCTTTACGGTGTC+TGG | 0.355140 | 2_3:+48954660 | Msa0296090:three_prime_UTR |
| TGATAGAGAATTCAAAATAA+AGG | 0.355987 | 2_3:-48954769 | None:intergenic |
| TCATTTATTTCTCCTGTTGT+CGG | 0.356159 | 2_3:-48951305 | None:intergenic |
| TCGCAGGGACCAGTATTTAA+TGG | 0.356179 | 2_3:+48954520 | Msa0296090:CDS |
| GATAGAGAATTCAAAATAAA+GGG | 0.356862 | 2_3:-48954768 | None:intergenic |
| GGCGAATTCATCATTGCTTC+AGG | 0.361459 | 2_3:+48943841 | Msa0296090:CDS |
| GGAGGACTCTGAAGAATATC+TGG | 0.364480 | 2_3:+48953841 | Msa0296090:CDS |
| AAGTAAAAGTGTACGAAGTC+AGG | 0.367205 | 2_3:+48944793 | Msa0296090:CDS |
| TTATGAATCAAACAATTTAA+GGG | 0.369483 | 2_3:-48954931 | None:intergenic |
| ATGGCCGTGGGCGTGGCCGT+GGG | 0.375951 | 2_3:+48954539 | Msa0296090:CDS |
| CGTAGGGTTTAGGGCCGGTT+GGG | 0.379359 | 2_3:-48943394 | None:intergenic |
| ATGCCACTTTATGTCCAATA+TGG | 0.380088 | 2_3:-48949337 | None:intergenic |
| TGGTTTGATCCTGTTGGCCT+TGG | 0.386013 | 2_3:+48951349 | Msa0296090:CDS |
| TGCAAGGAGCCGATTAACTT+TGG | 0.388741 | 2_3:-48953253 | None:intergenic |
| ATTCTTGCAGGCAGAAGATA+TGG | 0.388891 | 2_3:+48953014 | Msa0296090:intron |
| TGAGATTGTTGCTTCTTAGT+TGG | 0.391971 | 2_3:-48943614 | None:intergenic |
| GAAAATTACCCAAAGTTAAT+CGG | 0.392408 | 2_3:+48953244 | Msa0296090:CDS |
| AAGAGGGGAGTTCAATCCTT+AGG | 0.397670 | 2_3:+48954490 | Msa0296090:CDS |
| ATCCTTAGGGCTCAAGTCGC+AGG | 0.398326 | 2_3:+48954504 | Msa0296090:CDS |
| AAGTTAATTCTGTAAAGATC+TGG | 0.399285 | 2_3:-48947414 | None:intergenic |
| TCCTGTTGTCGGCTCAATGC+TGG | 0.400598 | 2_3:-48951294 | None:intergenic |
| TTCAACTTATTGAAGATTTG+AGG | 0.412193 | 2_3:+48943779 | Msa0296090:CDS |
| GTGTATAAATGATACATTAG+AGG | 0.419114 | 2_3:-48954704 | None:intergenic |
| ATCAGTTCACAAACCGTGTC+AGG | 0.421583 | 2_3:-48949426 | None:intergenic |
| TCTAGAGAAGAACACCATTT+GGG | 0.426444 | 2_3:-48951419 | None:intergenic |
| TAAGTACATTGGTGCCAATC+AGG | 0.429942 | 2_3:-48951633 | None:intergenic |
| TTTCAGCATCTTCAGTTTCA+AGG | 0.431931 | 2_3:-48953284 | None:intergenic |
| ACCAGCATTGAGCCGACAAC+AGG | 0.432509 | 2_3:+48951293 | Msa0296090:CDS |
| GCAAGGAGCCGATTAACTTT+GGG | 0.437654 | 2_3:-48953252 | None:intergenic |
| TTAAATTTGACCCACCTGAT+TGG | 0.438471 | 2_3:+48951619 | Msa0296090:CDS |
| GGCTACAGTCCAAGGCCAAC+AGG | 0.438693 | 2_3:-48951358 | None:intergenic |
| GTCACAGCATTGGAGTTTGA+TGG | 0.439989 | 2_3:+48948593 | Msa0296090:CDS |
| GAAGAACACCATTTGGGAAC+AGG | 0.442657 | 2_3:-48951413 | None:intergenic |
| TATTCCACGTGGTGTTAAGC+AGG | 0.446998 | 2_3:+48954375 | Msa0296090:CDS |
| TTCAGATTACATGCTCAGTA+TGG | 0.447173 | 2_3:-48954867 | None:intergenic |
| GTATTTAATGGCCGTGGGCG+TGG | 0.447358 | 2_3:+48954532 | Msa0296090:CDS |
| AGATGAGGAATCACTTCCTA+TGG | 0.449297 | 2_3:+48954309 | Msa0296090:CDS |
| AATGACGTGTGTACATTTCC+TGG | 0.450259 | 2_3:+48951323 | Msa0296090:CDS |
| GGCCGTGGGAGAGGGAACCG+TGG | 0.451384 | 2_3:+48954565 | Msa0296090:CDS |
| ATGTGATCTTGTATTCGAAC+AGG | 0.453059 | 2_3:-48949209 | None:intergenic |
| CGCCCACGGCCATTAAATAC+TGG | 0.456545 | 2_3:-48954529 | None:intergenic |
| AAAGCAAACATCCTTGTTGA+AGG | 0.459302 | 2_3:+48953886 | Msa0296090:CDS |
| CCCTCGGACCTGTTCCCAAA+TGG | 0.462240 | 2_3:+48951405 | Msa0296090:CDS |
| TTTCCCTTGTTAAGGGGAAA+GGG | 0.465649 | 2_3:+48954804 | Msa0296090:three_prime_UTR |
| TGGCCGTGGGCGTGGCCGTG+GGG | 0.465888 | 2_3:+48954540 | Msa0296090:CDS |
| CAGGTATGGCAGCTCCATAT+TGG | 0.466470 | 2_3:+48949323 | Msa0296090:intron |
| GGACCAGTATTTAATGGCCG+TGG | 0.469990 | 2_3:+48954526 | Msa0296090:CDS |
| AGTTAATTCTGTAAAGATCT+GGG | 0.470648 | 2_3:-48947413 | None:intergenic |
| TTATCACTAGTTATCAACTT+TGG | 0.471064 | 2_3:-48949381 | None:intergenic |
| GGGGACTTCTTAATGGCTGT+TGG | 0.471771 | 2_3:+48948620 | Msa0296090:CDS |
| GTTTCCCTTGTTAAGGGGAA+AGG | 0.474428 | 2_3:+48954803 | Msa0296090:three_prime_UTR |
| GCCGTGGGAGAGGGAACCGT+GGG | 0.477546 | 2_3:+48954566 | Msa0296090:CDS |
| ATGGCTGTTGGAAGCAGTGC+AGG | 0.483548 | 2_3:+48948632 | Msa0296090:CDS |
| ATAAAATCAACATCAATAAA+CGG | 0.484163 | 2_3:+48943539 | Msa0296090:CDS |
| TAAACATGTCGTTAGGATAT+GGG | 0.484791 | 2_3:+48949401 | Msa0296090:CDS |
| GGCACCATCTTCACCGCCAC+AGG | 0.486541 | 2_3:-48948018 | None:intergenic |
| TCGTAGGGTTTAGGGCCGGT+TGG | 0.488543 | 2_3:-48943395 | None:intergenic |
| CTTCCCCTTTCCCCTTAACA+AGG | 0.489931 | 2_3:-48954808 | None:intergenic |
| TGTTAAGGGGAAAGGGGAAG+AGG | 0.492234 | 2_3:+48954811 | Msa0296090:three_prime_UTR |
| CGTGGTGTTAAGCAGGGTCC+TGG | 0.492480 | 2_3:+48954382 | Msa0296090:CDS |
| GCAATGATGAATTCGCCATC+AGG | 0.493345 | 2_3:-48943835 | None:intergenic |
| TGGTAGTGGTTTGATCCTGT+TGG | 0.494517 | 2_3:+48951343 | Msa0296090:CDS |
| TGAACGGGCCTCAAGAATTA+CGG | 0.495878 | 2_3:+48953095 | Msa0296090:CDS |
| TTCTTCTCTAGAAAATTTCA+CGG | 0.496814 | 2_3:+48951430 | Msa0296090:CDS |
| GTGTGTACATTTCCTGGTAG+TGG | 0.498687 | 2_3:+48951329 | Msa0296090:CDS |
| TTTACAGGAGGAACTAGAGA+TGG | 0.498860 | 2_3:+48951537 | Msa0296090:intron |
| TTACAGAATTAACTTAGAGC+AGG | 0.499324 | 2_3:+48947422 | Msa0296090:CDS |
| GTGTACGAAGTCAGGGAGCT+GGG | 0.500013 | 2_3:+48944801 | Msa0296090:CDS |
| GTTGCCTGTGGCGGTGAAGA+TGG | 0.502606 | 2_3:+48948014 | Msa0296090:CDS |
| GTGGAATATGAGAGGATTGT+CGG | 0.507002 | 2_3:-48954360 | None:intergenic |
| GTTATTTCCCGTGATCCTCC+AGG | 0.510502 | 2_3:-48954400 | None:intergenic |
| TCTGTAAAGATCTGGGGAAG+AGG | 0.510948 | 2_3:-48947406 | None:intergenic |
| CCGTGGGAGAGGGAACCGTG+GGG | 0.511097 | 2_3:+48954567 | Msa0296090:CDS |
| AGAGGGGAGTTCAATCCTTA+GGG | 0.512815 | 2_3:+48954491 | Msa0296090:CDS |
| CGCAGGGGATTGTGTGGTAA+GGG | 0.514378 | 2_3:-48947832 | None:intergenic |
| CGTGGGAGAGGGAACCGTGG+GGG | 0.517971 | 2_3:+48954568 | Msa0296090:CDS |
| ACGCAGGGGATTGTGTGGTA+AGG | 0.522235 | 2_3:-48947833 | None:intergenic |
| GATCTTTACGGTGTCTGGCA+TGG | 0.522873 | 2_3:+48954665 | Msa0296090:three_prime_UTR |
| TGCCAGACACCGTAAAGATC+AGG | 0.523283 | 2_3:-48954662 | None:intergenic |
| GCATTGGAGTTTGATGGTGA+TGG | 0.526075 | 2_3:+48948599 | Msa0296090:CDS |
| TGCCCTGTTTCTCGAAGTGA+AGG | 0.527329 | 2_3:-48954422 | None:intergenic |
| CTAGTGATAAACATGTCGTT+AGG | 0.527722 | 2_3:+48949394 | Msa0296090:CDS |
| AGTGTACGAAGTCAGGGAGC+TGG | 0.529583 | 2_3:+48944800 | Msa0296090:CDS |
| CATTGGAGTTTGATGGTGAT+GGG | 0.532882 | 2_3:+48948600 | Msa0296090:CDS |
| TGGTATTTGGCTACAGTCCA+AGG | 0.532918 | 2_3:-48951366 | None:intergenic |
| GCAGGGTCCTGGAGGATCAC+GGG | 0.533382 | 2_3:+48954393 | Msa0296090:CDS |
| TGTTGGAAGCAGTGCAGGAA+AGG | 0.536625 | 2_3:+48948637 | Msa0296090:CDS |
| TCTCCAGCATAAAACCCAAC+CGG | 0.536824 | 2_3:+48943380 | Msa0296090:five_prime_UTR |
| TATGAAAGAGAGAGAGCTGC+CGG | 0.541523 | 2_3:-48943482 | None:intergenic |
| ATATCTGGCTTTGCATCCCA+TGG | 0.541980 | 2_3:+48953856 | Msa0296090:CDS |
| TTTGTAGGAAGTCACAGCAT+TGG | 0.543342 | 2_3:+48948583 | Msa0296090:intron |
| CTCCGCCATCGAATCTTCTC+CGG | 0.547701 | 2_3:+48943463 | Msa0296090:intron |
| GTACTTAGAGCCTACATGCA+TGG | 0.549497 | 2_3:+48951649 | Msa0296090:CDS |
| TTACAGGAGGAACTAGAGAT+GGG | 0.553975 | 2_3:+48951538 | Msa0296090:intron |
| AAGATTAAAGCCACTCCTGA+TGG | 0.554083 | 2_3:+48943820 | Msa0296090:CDS |
| CGCACGGAGAGGTGTTCGTA+GGG | 0.558022 | 2_3:-48943410 | None:intergenic |
| TACTTAGAGCCTACATGCAT+GGG | 0.558063 | 2_3:+48951650 | Msa0296090:CDS |
| GCTCCATATTGGACATAAAG+TGG | 0.563734 | 2_3:+48949334 | Msa0296090:CDS |
| AACAGGATCAAACCACTACC+AGG | 0.565301 | 2_3:-48951341 | None:intergenic |
| AGGGATGGTATGATGTAAGA+TGG | 0.566320 | 2_3:-48951386 | None:intergenic |
| CATCGTACTCTTAACTTCGA+AGG | 0.567572 | 2_3:+48949357 | Msa0296090:CDS |
| GAACAGGACGTGACGAGCGC+AGG | 0.570565 | 2_3:-48949193 | None:intergenic |
| ACCTAGTGGTGATGTTGACC+AGG | 0.571748 | 2_3:+48948097 | Msa0296090:CDS |
| AGCTGCCGGAGAAGATTCGA+TGG | 0.571900 | 2_3:-48943468 | None:intergenic |
| TCTGATGACGATCTAAGTCT+AGG | 0.573071 | 2_3:+48953929 | Msa0296090:CDS |
| AGCAGGGTCCTGGAGGATCA+CGG | 0.573847 | 2_3:+48954392 | Msa0296090:CDS |
| TTCATAGAAGCAAGCAACAA+TGG | 0.574981 | 2_3:+48943499 | Msa0296090:exon |
| GCGCACGGAGAGGTGTTCGT+AGG | 0.576689 | 2_3:-48943411 | None:intergenic |
| GTAAAGATCAGGCAAGATCT+GGG | 0.577416 | 2_3:-48954651 | None:intergenic |
| AATAAAGAACCCATGCATGT+AGG | 0.581693 | 2_3:-48951659 | None:intergenic |
| TCCTTAGGGCTCAAGTCGCA+GGG | 0.581719 | 2_3:+48954505 | Msa0296090:CDS |
| GGAAGAGGTTCAAGTTATCA+CGG | 0.582602 | 2_3:+48954826 | Msa0296090:three_prime_UTR |
| CGTTGAATGTAGTTTGTCGA+AGG | 0.582896 | 2_3:+48947853 | Msa0296090:CDS |
| GCAACAATGGCGACTCGTGA+CGG | 0.584239 | 2_3:+48943512 | Msa0296090:exon |
| CTCTTATGACAGGATGGGAA+GGG | 0.589993 | 2_3:+48947341 | Msa0296090:intron |
| GTGTTCGTAGGGTTTAGGGC+CGG | 0.591954 | 2_3:-48943399 | None:intergenic |
| GGGATATTACTTATGACGAC+TGG | 0.593321 | 2_3:+48947361 | Msa0296090:CDS |
| GACAAACTACATTCAACGCA+GGG | 0.593499 | 2_3:-48947848 | None:intergenic |
| TAGAGAATTCAAAATAAAGG+GGG | 0.594559 | 2_3:-48954766 | None:intergenic |
| TTCCCTTGTTAAGGGGAAAG+GGG | 0.594759 | 2_3:+48954805 | Msa0296090:three_prime_UTR |
| GACCAGTATTTAATGGCCGT+GGG | 0.595509 | 2_3:+48954527 | Msa0296090:CDS |
| TTCCCCTTTCCCCTTAACAA+GGG | 0.598535 | 2_3:-48954807 | None:intergenic |
| GCTTTCACTCTATCTCCCAT+AGG | 0.600400 | 2_3:-48954325 | None:intergenic |
| TCCCTGCGACTTGAGCCCTA+AGG | 0.602399 | 2_3:-48954506 | None:intergenic |
| GTCGGTAGAATTGATGCTGT+CGG | 0.604072 | 2_3:+48948074 | Msa0296090:CDS |
| GAAGAGGTTCAAGTTATCAC+GGG | 0.604293 | 2_3:+48954827 | Msa0296090:three_prime_UTR |
| CCCCACGGTTCCCTCTCCCA+CGG | 0.604603 | 2_3:-48954567 | None:intergenic |
| GATGAATTCGCCATCAGGAG+TGG | 0.605024 | 2_3:-48943830 | None:intergenic |
| TTTCAAGGAGGCGAGCTGCA+AGG | 0.605240 | 2_3:-48953269 | None:intergenic |
| GATGAGGAATCACTTCCTAT+GGG | 0.605754 | 2_3:+48954310 | Msa0296090:CDS |
| CCATTTGGGAACAGGTCCGA+GGG | 0.607815 | 2_3:-48951405 | None:intergenic |
| CATGTAGGCTCTAAGTACAT+TGG | 0.608871 | 2_3:-48951644 | None:intergenic |
| TTGGGAACAGGTCCGAGGGA+TGG | 0.611778 | 2_3:-48951401 | None:intergenic |
| GTACATTGGTGCCAATCAGG+TGG | 0.612449 | 2_3:-48951630 | None:intergenic |
| AGTAAAAGTGTACGAAGTCA+GGG | 0.612654 | 2_3:+48944794 | Msa0296090:CDS |
| AGGGGATTGTGTGGTAAGGG+AGG | 0.614929 | 2_3:-48947829 | None:intergenic |
| GTTCATGGGTTAGTTGCCTG+TGG | 0.615272 | 2_3:+48948002 | Msa0296090:CDS |
| TACATTGGTGCCAATCAGGT+GGG | 0.615683 | 2_3:-48951629 | None:intergenic |
| GTTAATTCTGTAAAGATCTG+GGG | 0.615771 | 2_3:-48947412 | None:intergenic |
| CGACAAACTACATTCAACGC+AGG | 0.617047 | 2_3:-48947849 | None:intergenic |
| ATAGAGAATTCAAAATAAAG+GGG | 0.619171 | 2_3:-48954767 | None:intergenic |
| AGATCGTCATCAGACATGAC+AGG | 0.620660 | 2_3:-48953920 | None:intergenic |
| TCTCTTATGACAGGATGGGA+AGG | 0.621236 | 2_3:+48947340 | Msa0296090:intron |
| ACCATTTGGGAACAGGTCCG+AGG | 0.621426 | 2_3:-48951406 | None:intergenic |
| ACGAGAAAACTCGAGTTCCA+AGG | 0.622265 | 2_3:+48953993 | Msa0296090:CDS |
| TCTTACATCATACCATCCCT+CGG | 0.623935 | 2_3:+48951389 | Msa0296090:CDS |
| TTGCAGGCAGAAGATATGGC+GGG | 0.624358 | 2_3:+48953018 | Msa0296090:intron |
| TCAGGAATTTGAGATTAAGG+AGG | 0.625108 | 2_3:+48953823 | Msa0296090:intron |
| TTCGAAATGTTCCTTCAACA+AGG | 0.628295 | 2_3:-48953897 | None:intergenic |
| TAGGATATGGGATCCTGACA+CGG | 0.629838 | 2_3:+48949413 | Msa0296090:CDS |
| AGTCTCAACCGTAATTCTTG+AGG | 0.631620 | 2_3:-48953103 | None:intergenic |
| ATTCAACGCAGGGGATTGTG+TGG | 0.631891 | 2_3:-48947838 | None:intergenic |
| ATTCCACGTGGTGTTAAGCA+GGG | 0.633445 | 2_3:+48954376 | Msa0296090:CDS |
| ACGTGGGTCAAAGCATTCCA+CGG | 0.633547 | 2_3:-48948039 | None:intergenic |
| AACCTTCACTTCGAGAAACA+GGG | 0.636686 | 2_3:+48954420 | Msa0296090:CDS |
| TATCTGGCTTTGCATCCCAT+GGG | 0.638341 | 2_3:+48953857 | Msa0296090:CDS |
| AGAGAATTCAAAATAAAGGG+GGG | 0.638926 | 2_3:-48954765 | None:intergenic |
| GGAATCCATGAAGCAAGTGA+AGG | 0.643761 | 2_3:-48943593 | None:intergenic |
| CAGCATCTTCAGTTTCAAGG+AGG | 0.644478 | 2_3:-48953281 | None:intergenic |
| CATGGGTTAGTTGCCTGTGG+CGG | 0.647144 | 2_3:+48948005 | Msa0296090:CDS |
| TGGCGGTGAAGATGGTGCCG+TGG | 0.652437 | 2_3:+48948022 | Msa0296090:CDS |
| CCGACTGAAGATCTTACACG+TGG | 0.656759 | 2_3:-48948056 | None:intergenic |
| ACTACAGTTTGCGAATACCA+AGG | 0.656760 | 2_3:+48945702 | Msa0296090:CDS |
| TAAGGATGAGCAGCATGCAG+AGG | 0.657972 | 2_3:+48954261 | Msa0296090:CDS |
| AACACCACGTGGAATATGAG+AGG | 0.662551 | 2_3:-48954368 | None:intergenic |
| CTTGCAGGCAGAAGATATGG+CGG | 0.663269 | 2_3:+48953017 | Msa0296090:intron |
| ATTGGAGTTTGATGGTGATG+GGG | 0.664866 | 2_3:+48948601 | Msa0296090:CDS |
| ACCTGGTCAACATCACCACT+AGG | 0.665008 | 2_3:-48948098 | None:intergenic |
| ACACACGACGGCGCACGGAG+AGG | 0.665691 | 2_3:-48943421 | None:intergenic |
| ATTGATGCTGTCGGACCTAG+TGG | 0.667084 | 2_3:+48948083 | Msa0296090:CDS |
| GGTGTTAAGCAGGGTCCTGG+AGG | 0.668227 | 2_3:+48954385 | Msa0296090:CDS |
| ACTATCGACGTCCTCTCCCA+CGG | 0.669645 | 2_3:-48954594 | None:intergenic |
| CAGGAGGAACTAGAGATGGG+TGG | 0.683257 | 2_3:+48951541 | Msa0296090:intron |
| ACAATGGCGACTCGTGACGG+AGG | 0.687566 | 2_3:+48943515 | Msa0296090:exon |
| ACAAACTACATTCAACGCAG+GGG | 0.707748 | 2_3:-48947847 | None:intergenic |
| CAATCCTCTCATATTCCACG+TGG | 0.712780 | 2_3:+48954364 | Msa0296090:CDS |
| GGACCCTGCTTAACACCACG+TGG | 0.717074 | 2_3:-48954379 | None:intergenic |
| CCACGTGTAAGATCTTCAGT+CGG | 0.726845 | 2_3:+48948056 | Msa0296090:CDS |
| CGACTGAAGATCTTACACGT+GGG | 0.751477 | 2_3:-48948055 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTGATTTATTTCTT+AGG | + | chr2_3:48944967-48944986 | Msa0296090:intron | 10.0% |
| !! | AATTATTATATTTGTATGTA+TGG | - | chr2_3:48949637-48949656 | None:intergenic | 10.0% |
| !! | TTAAAAGAATGAATATATAT+TGG | + | chr2_3:48949686-48949705 | Msa0296090:intron | 10.0% |
| !!! | ATTTTATTTCTCAATATTAT+AGG | - | chr2_3:48950057-48950076 | None:intergenic | 10.0% |
| !! | AAAAATAATTATTGAAAATG+AGG | - | chr2_3:48952230-48952249 | None:intergenic | 10.0% |
| !! | ATGTTAATAATGAAATAAAA+TGG | + | chr2_3:48954167-48954186 | Msa0296090:intron | 10.0% |
| !! | ATAAAATCAACATCAATAAA+CGG | + | chr2_3:48943539-48943558 | Msa0296090:CDS | 15.0% |
| !! | AAATATCAAAAATCAAAATG+TGG | - | chr2_3:48944323-48944342 | None:intergenic | 15.0% |
| !!! | CATTTTGATTTTTGATATTT+CGG | + | chr2_3:48944323-48944342 | Msa0296090:intron | 15.0% |
| !!! | ATTTTAGTATAATTGAACAA+AGG | - | chr2_3:48945055-48945074 | None:intergenic | 15.0% |
| !! | CAATTATACTAAAATACTAT+AGG | + | chr2_3:48945060-48945079 | Msa0296090:intron | 15.0% |
| !! | AAACTTCATAAATTTGATAT+TGG | - | chr2_3:48945226-48945245 | None:intergenic | 15.0% |
| !!! | TTGTTTGTTTTTAATAACTA+TGG | + | chr2_3:48945328-48945347 | Msa0296090:intron | 15.0% |
| !!! | ATCTGTTGTTTTTAATTTAT+AGG | + | chr2_3:48945397-48945416 | Msa0296090:intron | 15.0% |
| !!! | TCATAACTAAATATTTTTTC+TGG | + | chr2_3:48945595-48945614 | Msa0296090:intron | 15.0% |
| !! | AAATAAGTGTTACAATATTA+TGG | - | chr2_3:48946251-48946270 | None:intergenic | 15.0% |
| !!! | TAATATTGTAACACTTATTT+TGG | + | chr2_3:48946251-48946270 | Msa0296090:intron | 15.0% |
| !! | ACAAATTGTAGTATTAATAA+GGG | - | chr2_3:48946662-48946681 | None:intergenic | 15.0% |
| !!! | AATTAATTTTATCGATCATT+TGG | + | chr2_3:48947640-48947659 | Msa0296090:intron | 15.0% |
| !! | TCCTAGTAAAAAAATTATAA+TGG | - | chr2_3:48948242-48948261 | None:intergenic | 15.0% |
| !! | GATATTCTTTACATTTAATA+TGG | + | chr2_3:48949147-48949166 | Msa0296090:intron | 15.0% |
| !!! | ATTTTATAATTCATAACGAA+CGG | - | chr2_3:48950460-48950479 | None:intergenic | 15.0% |
| !! | TATATAGAAATATTAATCCA+TGG | + | chr2_3:48953188-48953207 | Msa0296090:intron | 15.0% |
| !! | TAAAGCTATATTTACAAATA+AGG | + | chr2_3:48953401-48953420 | Msa0296090:CDS | 15.0% |
| !! | TTATGAATCAAACAATTTAA+GGG | - | chr2_3:48954934-48954953 | None:intergenic | 15.0% |
| !! | TTTATGAATCAAACAATTTA+AGG | - | chr2_3:48954935-48954954 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTCTGTTGTTATT+AGG | + | chr2_3:48943742-48943761 | Msa0296090:intron | 20.0% |
| !! | AAAAACAGCTTATAAATAAG+TGG | - | chr2_3:48943896-48943915 | None:intergenic | 20.0% |
| !!! | CTTATATAAGCTATTTCTAT+AGG | + | chr2_3:48944033-48944052 | Msa0296090:intron | 20.0% |
| !!! | TTTTTGTATATGCTATAAGT+TGG | + | chr2_3:48944080-48944099 | Msa0296090:intron | 20.0% |
| !! | TTTGAAAGAACTTATGAAAA+GGG | - | chr2_3:48944172-48944191 | None:intergenic | 20.0% |
| !! | ATTTGAAAGAACTTATGAAA+AGG | - | chr2_3:48944173-48944192 | None:intergenic | 20.0% |
| !!! | TAATAATTAACCTGTTTTCT+TGG | + | chr2_3:48944266-48944285 | Msa0296090:intron | 20.0% |
| !! | AATGATATTGAATGAAACAT+TGG | - | chr2_3:48944947-48944966 | None:intergenic | 20.0% |
| !! | GACAATTTACTTATAAATCA+AGG | + | chr2_3:48945168-48945187 | Msa0296090:intron | 20.0% |
| !! | ATAAATCTACATGCAAAATA+TGG | + | chr2_3:48945674-48945693 | Msa0296090:CDS | 20.0% |
| !!! | GAAGTTGAAATTCTTATTTA+AGG | - | chr2_3:48945986-48946005 | None:intergenic | 20.0% |
| !! | TAATAAAACCGAAATTTATC+AGG | - | chr2_3:48946305-48946324 | None:intergenic | 20.0% |
| !!! | GATAAATTTCGGTTTTATTA+TGG | + | chr2_3:48946305-48946324 | Msa0296090:intron | 20.0% |
| !! | TTATTGTTATAAAGCAGTAA+TGG | + | chr2_3:48946328-48946347 | Msa0296090:intron | 20.0% |
| !! | GTATTAATAAGGGATATATA+TGG | - | chr2_3:48946652-48946671 | None:intergenic | 20.0% |
| !! | GACAAATTGTAGTATTAATA+AGG | - | chr2_3:48946663-48946682 | None:intergenic | 20.0% |
| !! | TTGAATACATCTATAAACAA+CGG | + | chr2_3:48946703-48946722 | Msa0296090:intron | 20.0% |
| !!! | AGTAGTTTCTTTGATATTTT+AGG | + | chr2_3:48946944-48946963 | Msa0296090:intron | 20.0% |
| !! | ATAAAAACCATTATATGGTA+AGG | - | chr2_3:48946996-48947015 | None:intergenic | 20.0% |
| !! | ACAGAATAAAAACCATTATA+TGG | - | chr2_3:48947001-48947020 | None:intergenic | 20.0% |
| !! | GTTCAAAATCATTCAAATTA+TGG | + | chr2_3:48947056-48947075 | Msa0296090:intron | 20.0% |
| !!! | GGAAATTATTTTGAAAGTAT+AGG | - | chr2_3:48947155-48947174 | None:intergenic | 20.0% |
| !! | AAAGAAATCTGATTATATGA+TGG | - | chr2_3:48947281-48947300 | None:intergenic | 20.0% |
| !! | TAAATGAAGAAAATAATGCA+GGG | - | chr2_3:48947907-48947926 | None:intergenic | 20.0% |
| !! | ATAAATGAAGAAAATAATGC+AGG | - | chr2_3:48947908-48947927 | None:intergenic | 20.0% |
| !!! | GCCATTATAATTTTTTTACT+AGG | + | chr2_3:48948238-48948257 | Msa0296090:intron | 20.0% |
| !!! | TAATTTTTTTACTAGGATGA+CGG | + | chr2_3:48948245-48948264 | Msa0296090:intron | 20.0% |
| !!! | AACTTATAAAAGCACATAAA+TGG | - | chr2_3:48948448-48948467 | None:intergenic | 20.0% |
| !! | CACTTGTATATCTATATTAA+TGG | + | chr2_3:48949277-48949296 | Msa0296090:intron | 20.0% |
| !!! | TATCTATATTAATGGTTTGT+TGG | + | chr2_3:48949285-48949304 | Msa0296090:intron | 20.0% |
| !! | ATCTGTTTATTAGAAAAATG+AGG | - | chr2_3:48950681-48950700 | None:intergenic | 20.0% |
| !!! | TCATTTTTCTAATAAACAGA+TGG | + | chr2_3:48950680-48950699 | Msa0296090:intron | 20.0% |
| !!! | ACTATTTTAATCTTCCAAAA+AGG | - | chr2_3:48950893-48950912 | None:intergenic | 20.0% |
| !!! | TCATTACAAATTTTTGACAA+AGG | + | chr2_3:48951582-48951601 | Msa0296090:CDS | 20.0% |
| !! | TCAATTGAATATATCTGTTA+TGG | - | chr2_3:48952022-48952041 | None:intergenic | 20.0% |
| !!! | TTGCAATTTTGAAAAGAAAA+CGG | + | chr2_3:48952129-48952148 | Msa0296090:intron | 20.0% |
| !! | AAAAAATATTTGATCACAGT+AGG | + | chr2_3:48952442-48952461 | Msa0296090:intron | 20.0% |
| !! | TGTTGAGTAATATATGAAAT+TGG | + | chr2_3:48952550-48952569 | Msa0296090:intron | 20.0% |
| !! | AATTAACAAATTGAACTAAC+TGG | - | chr2_3:48952663-48952682 | None:intergenic | 20.0% |
| !!! | TATATCAAATGACTTTTGAA+CGG | + | chr2_3:48952734-48952753 | Msa0296090:intron | 20.0% |
| !!! | TCATTGTCTTTTTTATGTTT+TGG | + | chr2_3:48952811-48952830 | Msa0296090:intron | 20.0% |
| !! | TAAAGATTTATTAAAGTGAC+AGG | - | chr2_3:48952883-48952902 | None:intergenic | 20.0% |
| !!! | TTGCATATTTTACATTGTTA+AGG | + | chr2_3:48953151-48953170 | Msa0296090:intron | 20.0% |
| !! | AAGTTACAATGTTTAAATGT+TGG | - | chr2_3:48953534-48953553 | None:intergenic | 20.0% |
| !! | AAATTTCAATAGATCACTAT+TGG | - | chr2_3:48953566-48953585 | None:intergenic | 20.0% |
| !!! | ATTTTTGGAACAAAACTTAT+TGG | - | chr2_3:48953680-48953699 | None:intergenic | 20.0% |
| !! | GACAATTATTACTTCTTATT+TGG | + | chr2_3:48953798-48953817 | Msa0296090:intron | 20.0% |
| !! | AGATGATATAGATAAAAAAG+TGG | + | chr2_3:48954456-48954475 | Msa0296090:CDS | 20.0% |
| !! | ACCATATACATAAATGTAAA+TGG | + | chr2_3:48954618-48954637 | Msa0296090:three_prime_UTR | 20.0% |
| !! | ATGTAAAAAAGTAAACTGTT+AGG | - | chr2_3:48954736-48954755 | None:intergenic | 20.0% |
| !!! | CAGTTTACTTTTTTACATTT+TGG | + | chr2_3:48954738-48954757 | Msa0296090:three_prime_UTR | 20.0% |
| !! | ATAGAGAATTCAAAATAAAG+GGG | - | chr2_3:48954770-48954789 | None:intergenic | 20.0% |
| !! | GATAGAGAATTCAAAATAAA+GGG | - | chr2_3:48954771-48954790 | None:intergenic | 20.0% |
| !! | TGATAGAGAATTCAAAATAA+AGG | - | chr2_3:48954772-48954791 | None:intergenic | 20.0% |
| ! | TTCAACTTATTGAAGATTTG+AGG | + | chr2_3:48943779-48943798 | Msa0296090:CDS | 25.0% |
| !!! | AACTCATATTAAGCTGTTTT+AGG | + | chr2_3:48943933-48943952 | Msa0296090:intron | 25.0% |
| ! | TATTATTTGTGAAACGTTAC+CGG | - | chr2_3:48944251-48944270 | None:intergenic | 25.0% |
| ! | CACAATTGTAACAACATATT+TGG | - | chr2_3:48944349-48944368 | None:intergenic | 25.0% |
| ! | CAAATATGTTGTTACAATTG+TGG | + | chr2_3:48944347-48944366 | Msa0296090:intron | 25.0% |
| ! | CATAAAGAATGTGATAAGTA+AGG | + | chr2_3:48944698-48944717 | Msa0296090:intron | 25.0% |
| ! | TCACATCAATTCAATATTGA+AGG | + | chr2_3:48944756-48944775 | Msa0296090:intron | 25.0% |
| ! | ATTAAAGTTTGAACGACATT+TGG | + | chr2_3:48944824-48944843 | Msa0296090:CDS | 25.0% |
| ! | ATATTGAATGAAACATTGGA+AGG | - | chr2_3:48944943-48944962 | None:intergenic | 25.0% |
| ! | TAAGTAAATTGTCTCCAAAA+GGG | - | chr2_3:48945161-48945180 | None:intergenic | 25.0% |
| ! | ATAAGTAAATTGTCTCCAAA+AGG | - | chr2_3:48945162-48945181 | None:intergenic | 25.0% |
| ! | GATATACATGAAACCAAATA+AGG | - | chr2_3:48945275-48945294 | None:intergenic | 25.0% |
| !! | TATTTGGTTTCATGTATATC+AGG | + | chr2_3:48945275-48945294 | Msa0296090:intron | 25.0% |
| ! | CTACATAGAAGAATGATTAT+AGG | - | chr2_3:48945308-48945327 | None:intergenic | 25.0% |
| ! | AAATGAAGCACAAAAACAAT+CGG | - | chr2_3:48945469-48945488 | None:intergenic | 25.0% |
| ! | AGAAGATTACAGATATACAT+AGG | - | chr2_3:48945571-48945590 | None:intergenic | 25.0% |
| !!! | CTAAATATTTTTTCTGGTGT+AGG | + | chr2_3:48945601-48945620 | Msa0296090:intron | 25.0% |
| !!! | ATGTGATAATTAGCTTTTTC+TGG | - | chr2_3:48945776-48945795 | None:intergenic | 25.0% |
| !! | ACAGAAACTAAGATTTTCTA+TGG | - | chr2_3:48945863-48945882 | None:intergenic | 25.0% |
| !!! | GTTTGTTATTGACTCTTATT+TGG | + | chr2_3:48945920-48945939 | Msa0296090:intron | 25.0% |
| ! | ATTGAACGCTAATGATAAAA+AGG | + | chr2_3:48946130-48946149 | Msa0296090:intron | 25.0% |
| ! | CAACTAATCCTGATAAATTT+CGG | + | chr2_3:48946294-48946313 | Msa0296090:intron | 25.0% |
| ! | GGATGTTATATTTCGATAAT+TGG | + | chr2_3:48946408-48946427 | Msa0296090:intron | 25.0% |
| ! | ATATAGTAATATCTTTCCTC+TGG | + | chr2_3:48946461-48946480 | Msa0296090:intron | 25.0% |
| ! | CTTTCCTACAATTCTATAAT+TGG | - | chr2_3:48946527-48946546 | None:intergenic | 25.0% |
| ! | AATTCACTAGATGCATTTAT+TGG | + | chr2_3:48946617-48946636 | Msa0296090:intron | 25.0% |
| ! | TGAATACATCTATAAACAAC+GGG | + | chr2_3:48946704-48946723 | Msa0296090:intron | 25.0% |
| ! | TACCTATTTATAAGACTCTT+TGG | - | chr2_3:48946802-48946821 | None:intergenic | 25.0% |
| !! | AAAGAGTCTTATAAATAGGT+AGG | + | chr2_3:48946801-48946820 | Msa0296090:intron | 25.0% |
| !! | AAGAGTCTTATAAATAGGTA+GGG | + | chr2_3:48946802-48946821 | Msa0296090:intron | 25.0% |
| ! | ATCAATTCCTTACCATATAA+TGG | + | chr2_3:48946986-48947005 | Msa0296090:intron | 25.0% |
| ! | ATTTAATCAAACAACAGTTG+CGG | - | chr2_3:48947234-48947253 | None:intergenic | 25.0% |
| ! | AATCTGATTATATGATGGTT+GGG | - | chr2_3:48947276-48947295 | None:intergenic | 25.0% |
| ! | AAATCTGATTATATGATGGT+TGG | - | chr2_3:48947277-48947296 | None:intergenic | 25.0% |
| ! | AGTTAATTCTGTAAAGATCT+GGG | - | chr2_3:48947416-48947435 | None:intergenic | 25.0% |
| ! | AAGTTAATTCTGTAAAGATC+TGG | - | chr2_3:48947417-48947436 | None:intergenic | 25.0% |
| !! | ATACAAATGTCTTTTCAGAT+TGG | + | chr2_3:48947523-48947542 | Msa0296090:intron | 25.0% |
| !!! | TTTTCAGATTGGTTGAATTT+TGG | + | chr2_3:48947534-48947553 | Msa0296090:intron | 25.0% |
| ! | CAATGAAAAAAGCTTAGTAA+AGG | - | chr2_3:48947672-48947691 | None:intergenic | 25.0% |
| !!! | CTTTACTAAGCTTTTTTCAT+TGG | + | chr2_3:48947670-48947689 | Msa0296090:intron | 25.0% |
| ! | AAAATAATGCAGGGTAAATT+GGG | - | chr2_3:48947898-48947917 | None:intergenic | 25.0% |
| !! | TACGAAGAAATTTAAAACCT+CGG | - | chr2_3:48948520-48948539 | None:intergenic | 25.0% |
| ! | GTTTAACGTTCTATATTTGT+AGG | + | chr2_3:48948568-48948587 | Msa0296090:intron | 25.0% |
| ! | TAATCATCTCATACAAAACT+TGG | - | chr2_3:48948703-48948722 | None:intergenic | 25.0% |
| ! | GATTAAGATAAAGTGATAGA+AGG | + | chr2_3:48948729-48948748 | Msa0296090:intron | 25.0% |
| ! | AAAACAATATTCTACGGATT+TGG | - | chr2_3:48948841-48948860 | None:intergenic | 25.0% |
| !! | AAATCCGTAGAATATTGTTT+TGG | + | chr2_3:48948840-48948859 | Msa0296090:intron | 25.0% |
| ! | CTAACCAAAACAATATTCTA+CGG | - | chr2_3:48948847-48948866 | None:intergenic | 25.0% |
| ! | AAAGAATATCCAATGTTGAA+GGG | - | chr2_3:48949137-48949156 | None:intergenic | 25.0% |
| ! | TAAAGAATATCCAATGTTGA+AGG | - | chr2_3:48949138-48949157 | None:intergenic | 25.0% |
| ! | TTGGTTAAAAATTGTCATAC+AGG | + | chr2_3:48949304-48949323 | Msa0296090:intron | 25.0% |
| ! | TAAAAATTGTCATACAGGTA+TGG | + | chr2_3:48949309-48949328 | Msa0296090:intron | 25.0% |
| ! | TTATCACTAGTTATCAACTT+TGG | - | chr2_3:48949384-48949403 | None:intergenic | 25.0% |
| ! | TTTCAAAATGTAGTGATAGT+AGG | + | chr2_3:48949728-48949747 | Msa0296090:intron | 25.0% |
| ! | ATGTGATGTGTAGAATAAAT+AGG | + | chr2_3:48949949-48949968 | Msa0296090:intron | 25.0% |
| !! | AACTATTTTGTCCTACATTT+CGG | - | chr2_3:48949975-48949994 | None:intergenic | 25.0% |
| ! | ATTATCAGAAGTTATACTTC+TGG | + | chr2_3:48949999-48950018 | Msa0296090:intron | 25.0% |
| ! | ATTTCTCAATATTATAGGAC+AGG | - | chr2_3:48950052-48950071 | None:intergenic | 25.0% |
| ! | ATATGTTAGACTGTAAAAAC+AGG | + | chr2_3:48950223-48950242 | Msa0296090:intron | 25.0% |
| ! | ATAGTGTTATGTTTAATGCT+AGG | + | chr2_3:48950419-48950438 | Msa0296090:intron | 25.0% |
| ! | TAGTGTTATGTTTAATGCTA+GGG | + | chr2_3:48950420-48950439 | Msa0296090:intron | 25.0% |
| !!! | AGTTGTCAAAATTGATTTTC+CGG | + | chr2_3:48950594-48950613 | Msa0296090:intron | 25.0% |
| ! | TAAAACAAAGTGATTGTTTC+AGG | + | chr2_3:48950730-48950749 | Msa0296090:intron | 25.0% |
| !! | AGTTATACGAAAATCCTTTT+TGG | + | chr2_3:48950876-48950895 | Msa0296090:intron | 25.0% |
| !!! | TTTAAAAAGGCACTCTAATT+GGG | - | chr2_3:48951189-48951208 | None:intergenic | 25.0% |
| !! | TTCTTCTCTAGAAAATTTCA+CGG | + | chr2_3:48951430-48951449 | Msa0296090:CDS | 25.0% |
| !! | TTACAAATTTTTGACAAAGG+AGG | + | chr2_3:48951585-48951604 | Msa0296090:CDS | 25.0% |
| ! | GCTTCATTTGATACAAAAAT+AGG | - | chr2_3:48951799-48951818 | None:intergenic | 25.0% |
| ! | TATTGAAAATGAGGAAAATG+AGG | - | chr2_3:48952221-48952240 | None:intergenic | 25.0% |
| !!! | TTTTGAAATGAAAAGTGTTC+AGG | + | chr2_3:48952382-48952401 | Msa0296090:intron | 25.0% |
| ! | AAGTCTTTCATCCTATAATA+GGG | - | chr2_3:48952512-48952531 | None:intergenic | 25.0% |
| ! | AGTAATATATGAAATTGGTC+TGG | + | chr2_3:48952555-48952574 | Msa0296090:intron | 25.0% |
| !!! | TTTTACCCATTTTTTAGCAT+AGG | + | chr2_3:48952636-48952655 | Msa0296090:intron | 25.0% |
| !!! | TTGTCTTTTTTATGTTTTGG+AGG | + | chr2_3:48952814-48952833 | Msa0296090:intron | 25.0% |
| ! | TGATTACAATAATGCCATAA+TGG | + | chr2_3:48952932-48952951 | Msa0296090:intron | 25.0% |
| ! | CATCTAAAAAACAACCATTA+TGG | - | chr2_3:48952949-48952968 | None:intergenic | 25.0% |
| ! | GAAAATTACCCAAAGTTAAT+CGG | + | chr2_3:48953244-48953263 | Msa0296090:CDS | 25.0% |
| ! | TGAAGATGTTGAAACTAAAA+AGG | + | chr2_3:48953326-48953345 | Msa0296090:CDS | 25.0% |
| !! | GAGAGCATAAGATATTAAAA+AGG | - | chr2_3:48953459-48953478 | None:intergenic | 25.0% |
| !!! | GTTTCATTTTTTGTTTCGTA+CGG | + | chr2_3:48953631-48953650 | Msa0296090:intron | 25.0% |
| !! | GAATCTTTTACCAATTTGTA+TGG | + | chr2_3:48954019-48954038 | Msa0296090:intron | 25.0% |
| !! | ATGGTTTCTTTTCCTTTTAT+AGG | + | chr2_3:48954038-48954057 | Msa0296090:intron | 25.0% |
| !!! | TGCTGATTCATCATATTAAT+AGG | + | chr2_3:48954070-48954089 | Msa0296090:intron | 25.0% |
| ! | ATTTCTGTAATTATTCACAC+CGG | + | chr2_3:48954107-48954126 | Msa0296090:intron | 25.0% |
| ! | AACATTGTCACATATAATGT+AGG | + | chr2_3:48954227-48954246 | Msa0296090:intron | 25.0% |
| ! | ATGTAGGATGTATGAAATTA+AGG | + | chr2_3:48954243-48954262 | Msa0296090:intron | 25.0% |
| ! | ATCTATATCATCTTCATTGT+AGG | - | chr2_3:48954449-48954468 | None:intergenic | 25.0% |
| ! | GCCATTTACATTTATGTATA+TGG | - | chr2_3:48954622-48954641 | None:intergenic | 25.0% |
| ! | GTGTATAAATGATACATTAG+AGG | - | chr2_3:48954707-48954726 | None:intergenic | 25.0% |
| ! | TAGAGAATTCAAAATAAAGG+GGG | - | chr2_3:48954769-48954788 | None:intergenic | 25.0% |
| !!! | AAATTTTGTTTCCCTTGTTA+AGG | + | chr2_3:48954796-48954815 | Msa0296090:three_prime_UTR | 25.0% |
| !!! | AATTTTGTTTCCCTTGTTAA+GGG | + | chr2_3:48954797-48954816 | Msa0296090:three_prime_UTR | 25.0% |
| ! | TATGTATTCTTTACCCATTT+CGG | + | chr2_3:48954897-48954916 | Msa0296090:three_prime_UTR | 25.0% |
| ACGAAAAGAGAAATGGAAAA+AGG | - | chr2_3:48943705-48943724 | None:intergenic | 30.0% | |
| AGAGAAAACGAAAAGAGAAA+TGG | - | chr2_3:48943712-48943731 | None:intergenic | 30.0% | |
| TGGTTATAACATCCAAAGAA+GGG | - | chr2_3:48943876-48943895 | None:intergenic | 30.0% | |
| ATAAGTCAATCCAAAAAGAC+CGG | + | chr2_3:48944229-48944248 | Msa0296090:intron | 30.0% | |
| ATGTAATATGTTAGTTGCCT+TGG | + | chr2_3:48944403-48944422 | Msa0296090:intron | 30.0% | |
| ! | GACAGAGAAAATCATGTTTT+AGG | + | chr2_3:48944457-48944476 | Msa0296090:intron | 30.0% |
| !!! | ATAACTTTTTTCAAGACTCG+AGG | - | chr2_3:48944559-48944578 | None:intergenic | 30.0% |
| TTATAGCGAGAAATTGTAGT+TGG | + | chr2_3:48944575-48944594 | Msa0296090:intron | 30.0% | |
| CCTAAAGGTCTATTATCTAT+CGG | - | chr2_3:48945003-48945022 | None:intergenic | 30.0% | |
| TCTTCAAGAAGTAAACCTAA+AGG | - | chr2_3:48945018-48945037 | None:intergenic | 30.0% | |
| ! | GATTTTTCCTTTTTCCCTTT+TGG | + | chr2_3:48945144-48945163 | Msa0296090:intron | 30.0% |
| ATACATGAAACCAAATAAGG+AGG | - | chr2_3:48945272-48945291 | None:intergenic | 30.0% | |
| AAATCCTTTACAAACGTATC+AGG | + | chr2_3:48945528-48945547 | Msa0296090:intron | 30.0% | |
| ! | AATACCAAGGTTTCATCTTT+TGG | + | chr2_3:48945715-48945734 | Msa0296090:intron | 30.0% |
| ! | TATCACATTGATGTGTTTTG+TGG | + | chr2_3:48945788-48945807 | Msa0296090:intron | 30.0% |
| !! | GTTATTGACTCTTATTTGGT+TGG | + | chr2_3:48945924-48945943 | Msa0296090:intron | 30.0% |
| TGTGAAAACTTGAACAGATA+AGG | + | chr2_3:48946160-48946179 | Msa0296090:intron | 30.0% | |
| ! | TAATGGCACTGAAATTTATC+CGG | + | chr2_3:48946345-48946364 | Msa0296090:intron | 30.0% |
| TTATACACACACAACAAATC+CGG | - | chr2_3:48946367-48946386 | None:intergenic | 30.0% | |
| TAATGAAGAGAGCTGTTATT+TGG | + | chr2_3:48946387-48946406 | Msa0296090:intron | 30.0% | |
| GACAATAAATCATAATCCAG+AGG | - | chr2_3:48946480-48946499 | None:intergenic | 30.0% | |
| TATAATTGGATCCACAACAA+AGG | - | chr2_3:48946513-48946532 | None:intergenic | 30.0% | |
| GGATCCAATTATAGAATTGT+AGG | + | chr2_3:48946520-48946539 | Msa0296090:intron | 30.0% | |
| ! | TGCAAAGGGTCTTATATTTA+GGG | - | chr2_3:48946598-48946617 | None:intergenic | 30.0% |
| ! | TTGCAAAGGGTCTTATATTT+AGG | - | chr2_3:48946599-48946618 | None:intergenic | 30.0% |
| ATACACATATTCAGAGAAGT+TGG | - | chr2_3:48946774-48946793 | None:intergenic | 30.0% | |
| ! | TGCCAAAGAGTCTTATAAAT+AGG | + | chr2_3:48946797-48946816 | Msa0296090:intron | 30.0% |
| TTATCTTCCCATGAAAGATT+TGG | + | chr2_3:48946856-48946875 | Msa0296090:intron | 30.0% | |
| AGTACTTCCAAATCTTTCAT+GGG | - | chr2_3:48946866-48946885 | None:intergenic | 30.0% | |
| AAGTACTTCCAAATCTTTCA+TGG | - | chr2_3:48946867-48946886 | None:intergenic | 30.0% | |
| GTTAATTCTGTAAAGATCTG+GGG | - | chr2_3:48947415-48947434 | None:intergenic | 30.0% | |
| TTACAGAATTAACTTAGAGC+AGG | + | chr2_3:48947422-48947441 | Msa0296090:CDS | 30.0% | |
| AAACAAGGAGTTACATTTGA+AGG | - | chr2_3:48947608-48947627 | None:intergenic | 30.0% | |
| GTCATGTATATACCAGATAT+GGG | - | chr2_3:48947706-48947725 | None:intergenic | 30.0% | |
| TGTCATGTATATACCAGATA+TGG | - | chr2_3:48947707-48947726 | None:intergenic | 30.0% | |
| ! | TCTTCTTTTCTTACTTGTCA+GGG | + | chr2_3:48947795-48947814 | Msa0296090:intron | 30.0% |
| GAAAATAATGCAGGGTAAAT+TGG | - | chr2_3:48947899-48947918 | None:intergenic | 30.0% | |
| AGTTCCACAAATTCAATACA+GGG | - | chr2_3:48947957-48947976 | None:intergenic | 30.0% | |
| AAGTTCCACAAATTCAATAC+AGG | - | chr2_3:48947958-48947977 | None:intergenic | 30.0% | |
| !! | ATCTTACCTGAATTTTAGCA+AGG | + | chr2_3:48947980-48947999 | Msa0296090:intron | 30.0% |
| !! | TGAATTTTAGCAAGGTTCAT+GGG | + | chr2_3:48947988-48948007 | Msa0296090:intron | 30.0% |
| ! | AAAAGCACATAAATGGTTAG+CGG | - | chr2_3:48948441-48948460 | None:intergenic | 30.0% |
| TTTATAAGTTCCATGTAGTC+TGG | + | chr2_3:48948458-48948477 | Msa0296090:intron | 30.0% | |
| !! | ATTGCTATTTGTATATGTCG+TGG | + | chr2_3:48949055-48949074 | Msa0296090:intron | 30.0% |
| !! | TTGCTATTTGTATATGTCGT+GGG | + | chr2_3:48949056-48949075 | Msa0296090:intron | 30.0% |
| AAGGGAAAAACATATAACCA+GGG | - | chr2_3:48949119-48949138 | None:intergenic | 30.0% | |
| ! | TATGTTTTTCCCTTCAACAT+TGG | + | chr2_3:48949125-48949144 | Msa0296090:intron | 30.0% |
| ACATTTAATATGGCATATGC+AGG | + | chr2_3:48949157-48949176 | Msa0296090:intron | 30.0% | |
| ATACAAGATCACATGTAAGT+CGG | + | chr2_3:48949218-48949237 | Msa0296090:intron | 30.0% | |
| ATAAACATGTCGTTAGGATA+TGG | + | chr2_3:48949400-48949419 | Msa0296090:CDS | 30.0% | |
| TAAACATGTCGTTAGGATAT+GGG | + | chr2_3:48949401-48949420 | Msa0296090:CDS | 30.0% | |
| ATTAAAACAATCATGCTCGA+GGG | - | chr2_3:48949506-48949525 | None:intergenic | 30.0% | |
| AATTAAAACAATCATGCTCG+AGG | - | chr2_3:48949507-48949526 | None:intergenic | 30.0% | |
| TCTAAGGAGAAAATGGAAAT+TGG | + | chr2_3:48949789-48949808 | Msa0296090:intron | 30.0% | |
| CTAAGGAGAAAATGGAAATT+GGG | + | chr2_3:48949790-48949809 | Msa0296090:intron | 30.0% | |
| ! | CAGGATCTTAATGTGTTATT+TGG | + | chr2_3:48950242-48950261 | Msa0296090:intron | 30.0% |
| TGATTCTTCATTTCTAACAC+TGG | - | chr2_3:48950283-48950302 | None:intergenic | 30.0% | |
| GAGAAAATGAAAGCAAAGAA+AGG | + | chr2_3:48950325-48950344 | Msa0296090:intron | 30.0% | |
| ! | CAGCAGTCAAATTTAACTTA+TGG | - | chr2_3:48950812-48950831 | None:intergenic | 30.0% |
| ATGTCAAGTATCTAAACACT+TGG | + | chr2_3:48951047-48951066 | Msa0296090:intron | 30.0% | |
| ! | CTTTGATAGCTAACTGTTAA+GGG | - | chr2_3:48951081-48951100 | None:intergenic | 30.0% |
| CTTAACAGTTAGCTATCAAA+GGG | + | chr2_3:48951080-48951099 | Msa0296090:intron | 30.0% | |
| TTAACAGTTAGCTATCAAAG+GGG | + | chr2_3:48951081-48951100 | Msa0296090:intron | 30.0% | |
| !! | GTTTAAAAAGGCACTCTAAT+TGG | - | chr2_3:48951190-48951209 | None:intergenic | 30.0% |
| TGCTGCAATTACGTTTAAAA+AGG | - | chr2_3:48951202-48951221 | None:intergenic | 30.0% | |
| ACAGAGTACAATATGTCATA+TGG | - | chr2_3:48951255-48951274 | None:intergenic | 30.0% | |
| ! | ACATATTGTACTCTGTTTTC+AGG | + | chr2_3:48951259-48951278 | Msa0296090:intron | 30.0% |
| ! | CATATTGTACTCTGTTTTCA+GGG | + | chr2_3:48951260-48951279 | Msa0296090:intron | 30.0% |
| ! | TCATTTATTTCTCCTGTTGT+CGG | - | chr2_3:48951308-48951327 | None:intergenic | 30.0% |
| GTATGATGTAAGATGGTATT+TGG | - | chr2_3:48951382-48951401 | None:intergenic | 30.0% | |
| CGGTATGATCATAATTACTT+CGG | + | chr2_3:48951450-48951469 | Msa0296090:intron | 30.0% | |
| TAAACAAAAGAAAGACTACC+AGG | - | chr2_3:48951500-48951519 | None:intergenic | 30.0% | |
| !!! | GACATCAGAACTATTTTTAC+AGG | + | chr2_3:48951522-48951541 | Msa0296090:intron | 30.0% |
| !!! | ATCAGAACTATTTTTACAGG+AGG | + | chr2_3:48951525-48951544 | Msa0296090:intron | 30.0% |
| ACAAATATTTACATGCCTAG+TGG | + | chr2_3:48951824-48951843 | Msa0296090:intron | 30.0% | |
| ! | TAACAATATCCTTTTCCACT+AGG | - | chr2_3:48951842-48951861 | None:intergenic | 30.0% |
| TAGTGGAAAAGGATATTGTT+AGG | + | chr2_3:48951841-48951860 | Msa0296090:intron | 30.0% | |
| !! | GGAAAGTTGATAATGAGTAT+AGG | + | chr2_3:48951862-48951881 | Msa0296090:intron | 30.0% |
| !!! | AACTACCTTTTGAGTTAGTT+AGG | + | chr2_3:48951926-48951945 | Msa0296090:intron | 30.0% |
| AAACACCTAACTAACTCAAA+AGG | - | chr2_3:48951934-48951953 | None:intergenic | 30.0% | |
| ATATTCAATTGACATCTGTG+AGG | + | chr2_3:48952030-48952049 | Msa0296090:intron | 30.0% | |
| TTTACCAGTCAATAACATTG+AGG | + | chr2_3:48952102-48952121 | Msa0296090:intron | 30.0% | |
| !! | TTTTGAAAAGAAAACGGACT+AGG | + | chr2_3:48952135-48952154 | Msa0296090:intron | 30.0% |
| GGAAAATGAGGAAAATTCAA+AGG | - | chr2_3:48952209-48952228 | None:intergenic | 30.0% | |
| AAATTAACAGTAGTTCCTGT+AGG | - | chr2_3:48952305-48952324 | None:intergenic | 30.0% | |
| ! | TGTTAATTTTCCTTGACAGT+CGG | + | chr2_3:48952316-48952335 | Msa0296090:intron | 30.0% |
| ATTTGATCACAGTAGGTTTA+TGG | + | chr2_3:48952449-48952468 | Msa0296090:intron | 30.0% | |
| GAATTCAACAACCCTATTAT+AGG | + | chr2_3:48952498-48952517 | Msa0296090:intron | 30.0% | |
| CAAGTCTTTCATCCTATAAT+AGG | - | chr2_3:48952513-48952532 | None:intergenic | 30.0% | |
| ATATTACTCAACAATGCTGA+GGG | - | chr2_3:48952543-48952562 | None:intergenic | 30.0% | |
| TATATTACTCAACAATGCTG+AGG | - | chr2_3:48952544-48952563 | None:intergenic | 30.0% | |
| AAAGTCTAAATAAAGCAGAC+TGG | - | chr2_3:48952700-48952719 | None:intergenic | 30.0% | |
| GATTTATTAAAGTGACAGGA+GGG | - | chr2_3:48952879-48952898 | None:intergenic | 30.0% | |
| AGATTTATTAAAGTGACAGG+AGG | - | chr2_3:48952880-48952899 | None:intergenic | 30.0% | |
| TATGACGTATTAATTCTTGC+AGG | + | chr2_3:48953002-48953021 | Msa0296090:intron | 30.0% | |
| GAGAAAAATTAGAAGCTGAA+CGG | + | chr2_3:48953079-48953098 | Msa0296090:CDS | 30.0% | |
| AGAAAAATTAGAAGCTGAAC+GGG | + | chr2_3:48953080-48953099 | Msa0296090:CDS | 30.0% | |
| ! | TAATTTTCTCTTGATCTGCA+AGG | - | chr2_3:48953232-48953251 | None:intergenic | 30.0% |
| AATTTGAACCTTCACATATC+AGG | - | chr2_3:48953500-48953519 | None:intergenic | 30.0% | |
| ATGTTTAAATGTTGGCAGTT+AGG | - | chr2_3:48953526-48953545 | None:intergenic | 30.0% | |
| CGAAACAAAAAATGAAACTG+AGG | - | chr2_3:48953629-48953648 | None:intergenic | 30.0% | |
| ! | TGCAGTGAAATCTGAATTTT+TGG | - | chr2_3:48953695-48953714 | None:intergenic | 30.0% |
| ! | TGAATGCCATGATGAAATTT+TGG | + | chr2_3:48953728-48953747 | Msa0296090:intron | 30.0% |
| AACACACCAAAATTTCATCA+TGG | - | chr2_3:48953737-48953756 | None:intergenic | 30.0% | |
| ! | ATTACTTCTTATTTGGCTTC+AGG | + | chr2_3:48953805-48953824 | Msa0296090:intron | 30.0% |
| !!! | TTCTCGTTTGTTTTATTTGC+AGG | - | chr2_3:48953980-48953999 | None:intergenic | 30.0% |
| GGAAAAGAAACCATACAAAT+TGG | - | chr2_3:48954032-48954051 | None:intergenic | 30.0% | |
| GCACATTTATCTCCTATAAA+AGG | - | chr2_3:48954053-48954072 | None:intergenic | 30.0% | |
| GAATAAACTACAAAATCTCC+TGG | - | chr2_3:48954142-48954161 | None:intergenic | 30.0% | |
| AGAGAATTCAAAATAAAGGG+GGG | - | chr2_3:48954768-48954787 | None:intergenic | 30.0% | |
| !! | ATTTTGTTTCCCTTGTTAAG+GGG | + | chr2_3:48954798-48954817 | Msa0296090:three_prime_UTR | 30.0% |
| GGCAAAAATTTATCCGAAAT+GGG | - | chr2_3:48954913-48954932 | None:intergenic | 30.0% | |
| TTCATAGAAGCAAGCAACAA+TGG | + | chr2_3:48943499-48943518 | Msa0296090:exon | 35.0% | |
| ! | TGAGATTGTTGCTTCTTAGT+TGG | - | chr2_3:48943617-48943636 | None:intergenic | 35.0% |
| !!! | AGTAGCTGGTTACTTTTGAT+AGG | - | chr2_3:48943644-48943663 | None:intergenic | 35.0% |
| AGAATAAGAAGAGAAGTAGC+TGG | - | chr2_3:48943658-48943677 | None:intergenic | 35.0% | |
| AAAGGTGAAGAAGAAGAAGA+AGG | - | chr2_3:48943687-48943706 | None:intergenic | 35.0% | |
| GTGGTTATAACATCCAAAGA+AGG | - | chr2_3:48943877-48943896 | None:intergenic | 35.0% | |
| ! | ATGAGGTGTTTATCGAAACA+GGG | - | chr2_3:48943959-48943978 | None:intergenic | 35.0% |
| ! | AATGAGGTGTTTATCGAAAC+AGG | - | chr2_3:48943960-48943979 | None:intergenic | 35.0% |
| TGTGCTATAAGCTGAAAATG+AGG | - | chr2_3:48943976-48943995 | None:intergenic | 35.0% | |
| !! | TGCTATAAGTTGGTTTCGTA+AGG | + | chr2_3:48944090-48944109 | Msa0296090:intron | 35.0% |
| ACTTATTTCAGCTTACCTAC+TGG | - | chr2_3:48944215-48944234 | None:intergenic | 35.0% | |
| TGTTGTTACAATTGTGGTTG+TGG | + | chr2_3:48944353-48944372 | Msa0296090:intron | 35.0% | |
| ATTCAAGCCTTCAATTGCAT+CGG | + | chr2_3:48944380-48944399 | Msa0296090:intron | 35.0% | |
| ATTACATCCGATGCAATTGA+AGG | - | chr2_3:48944390-48944409 | None:intergenic | 35.0% | |
| ! | TATCTTTTACAACACGTGAC+TGG | - | chr2_3:48944625-48944644 | None:intergenic | 35.0% |
| AGTCACGTGTTGTAAAAGAT+AGG | + | chr2_3:48944624-48944643 | Msa0296090:intron | 35.0% | |
| ! | ACTTCGTACACTTTTACTTG+TGG | - | chr2_3:48944792-48944811 | None:intergenic | 35.0% |
| ! | AAGTAAAAGTGTACGAAGTC+AGG | + | chr2_3:48944793-48944812 | Msa0296090:CDS | 35.0% |
| ! | AGTAAAAGTGTACGAAGTCA+GGG | + | chr2_3:48944794-48944813 | Msa0296090:CDS | 35.0% |
| !!! | TTCAGAGATCGTTGATTTTC+AGG | + | chr2_3:48944848-48944867 | Msa0296090:CDS | 35.0% |
| CCGATAGATAATAGACCTTT+AGG | + | chr2_3:48945000-48945019 | Msa0296090:intron | 35.0% | |
| ATTGTCTCCAAAAGGGAAAA+AGG | - | chr2_3:48945154-48945173 | None:intergenic | 35.0% | |
| ! | ACTTTTCTCTCCTCCTTATT+TGG | + | chr2_3:48945259-48945278 | Msa0296090:intron | 35.0% |
| TAAGCCAAAAGATGAAACCT+TGG | - | chr2_3:48945722-48945741 | None:intergenic | 35.0% | |
| CTTAGTTTCTGTACTGAACT+TGG | + | chr2_3:48945871-48945890 | Msa0296090:intron | 35.0% | |
| ACTTGGCTGTTATAGACTAA+AGG | + | chr2_3:48945888-48945907 | Msa0296090:intron | 35.0% | |
| ! | TCCCATATTTGGTGAAATTG+CGG | + | chr2_3:48946020-48946039 | Msa0296090:intron | 35.0% |
| ACCGCAATTTCACCAAATAT+GGG | - | chr2_3:48946024-48946043 | None:intergenic | 35.0% | |
| AACCGCAATTTCACCAAATA+TGG | - | chr2_3:48946025-48946044 | None:intergenic | 35.0% | |
| !! | TCTGTTCAAGTTTTCACAAG+AGG | - | chr2_3:48946158-48946177 | None:intergenic | 35.0% |
| CCACAACAAAGGAAAAATTC+TGG | - | chr2_3:48946502-48946521 | None:intergenic | 35.0% | |
| ! | CCAGAATTTTTCCTTTGTTG+TGG | + | chr2_3:48946499-48946518 | Msa0296090:intron | 35.0% |
| GTCTTATAAATAGGGATGGA+GGG | - | chr2_3:48946554-48946573 | None:intergenic | 35.0% | |
| ! | CCAAACGGGTCTTATAAATA+GGG | - | chr2_3:48946562-48946581 | None:intergenic | 35.0% |
| ! | TCCAAACGGGTCTTATAAAT+AGG | - | chr2_3:48946563-48946582 | None:intergenic | 35.0% |
| GACAAACAAAACTTCCAAAC+GGG | - | chr2_3:48946576-48946595 | None:intergenic | 35.0% | |
| GGACAAACAAAACTTCCAAA+CGG | - | chr2_3:48946577-48946596 | None:intergenic | 35.0% | |
| TGCATCTAGTGAATTGCAAA+GGG | - | chr2_3:48946612-48946631 | None:intergenic | 35.0% | |
| ATGCATCTAGTGAATTGCAA+AGG | - | chr2_3:48946613-48946632 | None:intergenic | 35.0% | |
| ! | AGTCTTATAAATAGGTAGGG+AGG | + | chr2_3:48946805-48946824 | Msa0296090:intron | 35.0% |
| GTCTTATAAATAGGTAGGGA+GGG | + | chr2_3:48946806-48946825 | Msa0296090:intron | 35.0% | |
| ! | GAAGTACTTAGTTAGAAGCT+TGG | + | chr2_3:48946878-48946897 | Msa0296090:intron | 35.0% |
| !! | ATGTTTTGTTCTGCAGTAGT+TGG | + | chr2_3:48946916-48946935 | Msa0296090:intron | 35.0% |
| ACTTGATGTTCTCTTATGAC+AGG | + | chr2_3:48947331-48947350 | Msa0296090:intron | 35.0% | |
| ATGTTCTCTTATGACAGGAT+GGG | + | chr2_3:48947336-48947355 | Msa0296090:intron | 35.0% | |
| !!! | AAGCTTTTTTCATTGGCTCT+TGG | + | chr2_3:48947677-48947696 | Msa0296090:intron | 35.0% |
| ! | GTCTTCTTTTCTTACTTGTC+AGG | + | chr2_3:48947794-48947813 | Msa0296090:intron | 35.0% |
| ! | CTTCTTTTCTTACTTGTCAG+GGG | + | chr2_3:48947796-48947815 | Msa0296090:intron | 35.0% |
| CATGAACCTTGCTAAAATTC+AGG | - | chr2_3:48947989-48948008 | None:intergenic | 35.0% | |
| !! | CTGAATTTTAGCAAGGTTCA+TGG | + | chr2_3:48947987-48948006 | Msa0296090:intron | 35.0% |
| GATACAGAATAAATGCTACC+TGG | - | chr2_3:48948118-48948137 | None:intergenic | 35.0% | |
| CAAAACCGTTATCCTAGTAT+TGG | - | chr2_3:48948200-48948219 | None:intergenic | 35.0% | |
| !! | CAATACTAGGATAACGGTTT+TGG | + | chr2_3:48948198-48948217 | Msa0296090:intron | 35.0% |
| !! | TTTTACTAGGATGACGGTTT+TGG | + | chr2_3:48948251-48948270 | Msa0296090:intron | 35.0% |
| !! | GAAGTGCTGAAACTGTTATA+AGG | + | chr2_3:48948382-48948401 | Msa0296090:intron | 35.0% |
| AAAGATGTTTCCAGACTACA+TGG | - | chr2_3:48948471-48948490 | None:intergenic | 35.0% | |
| ! | GTAACACCTTTTCTCTAACA+AGG | + | chr2_3:48948909-48948928 | Msa0296090:intron | 35.0% |
| CCTATTCCTTGTTAGAGAAA+AGG | - | chr2_3:48948918-48948937 | None:intergenic | 35.0% | |
| ! | CCTTTTCTCTAACAAGGAAT+AGG | + | chr2_3:48948915-48948934 | Msa0296090:intron | 35.0% |
| GGTGCATGAAACTAAGTATA+TGG | - | chr2_3:48948948-48948967 | None:intergenic | 35.0% | |
| CTTGAGTTTCATGTGTGATA+GGG | + | chr2_3:48948977-48948996 | Msa0296090:intron | 35.0% | |
| AGGGAAAAACATATAACCAG+GGG | - | chr2_3:48949118-48949137 | None:intergenic | 35.0% | |
| GAAGGGAAAAACATATAACC+AGG | - | chr2_3:48949120-48949139 | None:intergenic | 35.0% | |
| ATGTGATCTTGTATTCGAAC+AGG | - | chr2_3:48949212-48949231 | None:intergenic | 35.0% | |
| !! | ATGCCACTTTATGTCCAATA+TGG | - | chr2_3:48949340-48949359 | None:intergenic | 35.0% |
| CTAGTGATAAACATGTCGTT+AGG | + | chr2_3:48949394-48949413 | Msa0296090:CDS | 35.0% | |
| TTAAAACAATCATGCTCGAG+GGG | - | chr2_3:48949505-48949524 | None:intergenic | 35.0% | |
| TGATATGAGCAACATTCTGT+TGG | + | chr2_3:48949563-48949582 | Msa0296090:intron | 35.0% | |
| GATATGAGCAACATTCTGTT+GGG | + | chr2_3:48949564-48949583 | Msa0296090:intron | 35.0% | |
| ATGTAGTGATAGTAGGAGAT+TGG | + | chr2_3:48949735-48949754 | Msa0296090:intron | 35.0% | |
| TAGGCTAGAAAAGAGATGAT+GGG | + | chr2_3:48949764-48949783 | Msa0296090:intron | 35.0% | |
| !! | AAAGAGATGATGGGAATCTA+AGG | + | chr2_3:48949773-48949792 | Msa0296090:intron | 35.0% |
| ATGGGAATCTAAGGAGAAAA+TGG | + | chr2_3:48949782-48949801 | Msa0296090:intron | 35.0% | |
| GAATAAATAGGCCGAAATGT+AGG | + | chr2_3:48949961-48949980 | Msa0296090:intron | 35.0% | |
| AGTTATACTTCTGGATGTTG+AGG | + | chr2_3:48950008-48950027 | Msa0296090:intron | 35.0% | |
| GTTATACTTCTGGATGTTGA+GGG | + | chr2_3:48950009-48950028 | Msa0296090:intron | 35.0% | |
| TCATACCACATCCTATCTTT+CGG | + | chr2_3:48950186-48950205 | Msa0296090:intron | 35.0% | |
| ! | AAGAATCACTTAGAAAGTGC+TGG | + | chr2_3:48950295-48950314 | Msa0296090:intron | 35.0% |
| AAAGGAGAAAGAGAATAGAG+CGG | + | chr2_3:48950343-48950362 | Msa0296090:intron | 35.0% | |
| AACTGTAAACTGAACTGTAC+TGG | + | chr2_3:48950389-48950408 | Msa0296090:intron | 35.0% | |
| !! | TCAAAATTGATTTTCCGGAG+AGG | + | chr2_3:48950599-48950618 | Msa0296090:intron | 35.0% |
| TCATGCATGCTATGTTTAGA+TGG | + | chr2_3:48951017-48951036 | Msa0296090:intron | 35.0% | |
| CATGCATGCTATGTTTAGAT+GGG | + | chr2_3:48951018-48951037 | Msa0296090:intron | 35.0% | |
| ! | CCTTTGATAGCTAACTGTTA+AGG | - | chr2_3:48951082-48951101 | None:intergenic | 35.0% |
| CCTTAACAGTTAGCTATCAA+AGG | + | chr2_3:48951079-48951098 | Msa0296090:intron | 35.0% | |
| TAACAGTTAGCTATCAAAGG+GGG | + | chr2_3:48951082-48951101 | Msa0296090:intron | 35.0% | |
| !! | TGGAGTGTTTAAGTGACTTT+TGG | - | chr2_3:48951112-48951131 | None:intergenic | 35.0% |
| ! | ATTGGGAATTGGGTGTTTTT+GGG | - | chr2_3:48951172-48951191 | None:intergenic | 35.0% |
| ! | AATTGGGAATTGGGTGTTTT+TGG | - | chr2_3:48951173-48951192 | None:intergenic | 35.0% |
| TATTGTGTGTTCATCAGCAT+TGG | + | chr2_3:48951226-48951245 | Msa0296090:intron | 35.0% | |
| TCTAGAGAAGAACACCATTT+GGG | - | chr2_3:48951422-48951441 | None:intergenic | 35.0% | |
| ! | TTCTAGAGAAGAACACCATT+TGG | - | chr2_3:48951423-48951442 | None:intergenic | 35.0% |
| TATCACGATATGATCATACC+TGG | + | chr2_3:48951479-48951498 | Msa0296090:intron | 35.0% | |
| TTAAATTTGACCCACCTGAT+TGG | + | chr2_3:48951619-48951638 | Msa0296090:CDS | 35.0% | |
| AATAAAGAACCCATGCATGT+AGG | - | chr2_3:48951662-48951681 | None:intergenic | 35.0% | |
| ATTTACATGCCTAGTGGAAA+AGG | + | chr2_3:48951830-48951849 | Msa0296090:intron | 35.0% | |
| AGACTAGAAAAGATACACCA+AGG | - | chr2_3:48951987-48952006 | None:intergenic | 35.0% | |
| CTTTCCTCAATGTTATTGAC+TGG | - | chr2_3:48952109-48952128 | None:intergenic | 35.0% | |
| ATCCCCTGTTTAAATGAGTT+TGG | + | chr2_3:48952343-48952362 | Msa0296090:intron | 35.0% | |
| TCCCCTGTTTAAATGAGTTT+GGG | + | chr2_3:48952344-48952363 | Msa0296090:intron | 35.0% | |
| TGCCCAAACTCATTTAAACA+GGG | - | chr2_3:48952349-48952368 | None:intergenic | 35.0% | |
| TTGCCCAAACTCATTTAAAC+AGG | - | chr2_3:48952350-48952369 | None:intergenic | 35.0% | |
| !! | GAAAAGTGTTCAGGAAAGAT+TGG | + | chr2_3:48952391-48952410 | Msa0296090:intron | 35.0% |
| CTGGTCCTATGCTAAAAAAT+GGG | - | chr2_3:48952644-48952663 | None:intergenic | 35.0% | |
| ACTGGTCCTATGCTAAAAAA+TGG | - | chr2_3:48952645-48952664 | None:intergenic | 35.0% | |
| AACGGTGTTTAGACTTCATT+TGG | + | chr2_3:48952752-48952771 | Msa0296090:intron | 35.0% | |
| !!! | ATGTTTTGGAGGATATCAGA+TGG | + | chr2_3:48952825-48952844 | Msa0296090:intron | 35.0% |
| ACATAAGTATAACAACGCAG+CGG | - | chr2_3:48952853-48952872 | None:intergenic | 35.0% | |
| AGAGAACAAAAGCAGAATCT+AGG | - | chr2_3:48952980-48952999 | None:intergenic | 35.0% | |
| TTTCAGCATCTTCAGTTTCA+AGG | - | chr2_3:48953287-48953306 | None:intergenic | 35.0% | |
| ! | AAGGCATCCAAGAAAAAGAA+AGG | + | chr2_3:48953345-48953364 | Msa0296090:CDS | 35.0% |
| AGGCATCCAAGAAAAAGAAA+GGG | + | chr2_3:48953346-48953365 | Msa0296090:CDS | 35.0% | |
| TCACATATCAGGAGAGAAAA+GGG | - | chr2_3:48953489-48953508 | None:intergenic | 35.0% | |
| TTCACATATCAGGAGAGAAA+AGG | - | chr2_3:48953490-48953509 | None:intergenic | 35.0% | |
| ! | TTTTCTCTCCTGATATGTGA+AGG | + | chr2_3:48953489-48953508 | Msa0296090:intron | 35.0% |
| TAGATCACTATTGGAGAAGT+GGG | - | chr2_3:48953557-48953576 | None:intergenic | 35.0% | |
| ATAGATCACTATTGGAGAAG+TGG | - | chr2_3:48953558-48953577 | None:intergenic | 35.0% | |
| ! | GCTTCAGGAATTTGAGATTA+AGG | + | chr2_3:48953820-48953839 | Msa0296090:intron | 35.0% |
| ! | TCAGGAATTTGAGATTAAGG+AGG | + | chr2_3:48953823-48953842 | Msa0296090:intron | 35.0% |
| AAAGCAAACATCCTTGTTGA+AGG | + | chr2_3:48953886-48953905 | Msa0296090:CDS | 35.0% | |
| TTCGAAATGTTCCTTCAACA+AGG | - | chr2_3:48953900-48953919 | None:intergenic | 35.0% | |
| TTGGTAAAAGATTCTCACCT+TGG | - | chr2_3:48954013-48954032 | None:intergenic | 35.0% | |
| AATCTCCTGGAAAAGAAAAC+CGG | - | chr2_3:48954129-48954148 | None:intergenic | 35.0% | |
| !! | CCTCATCTGCAATTGATTTT+TGG | - | chr2_3:48954297-48954316 | None:intergenic | 35.0% |
| CCAAAAATCAATTGCAGATG+AGG | + | chr2_3:48954294-48954313 | Msa0296090:CDS | 35.0% | |
| TAGATAAAAAAGTGGAACCC+CGG | + | chr2_3:48954464-48954483 | Msa0296090:CDS | 35.0% | |
| TTCAGATTACATGCTCAGTA+TGG | - | chr2_3:48954870-48954889 | None:intergenic | 35.0% | |
| GGGCAAAAATTTATCCGAAA+TGG | - | chr2_3:48954914-48954933 | None:intergenic | 35.0% | |
| AACAACCTTCACTTGCTTCA+TGG | + | chr2_3:48943588-48943607 | Msa0296090:CDS | 40.0% | |
| AAGATTAAAGCCACTCCTGA+TGG | + | chr2_3:48943820-48943839 | Msa0296090:CDS | 40.0% | |
| ! | GTTGGTTTCGTAAGGTATCT+TGG | + | chr2_3:48944098-48944117 | Msa0296090:intron | 40.0% |
| ! | TGAAACGTTACCGGTCTTTT+TGG | - | chr2_3:48944242-48944261 | None:intergenic | 40.0% |
| TGTGTAGCTACCAAGAAAAC+AGG | - | chr2_3:48944279-48944298 | None:intergenic | 40.0% | |
| !! | TGTTTTCTTGGTAGCTACAC+AGG | + | chr2_3:48944278-48944297 | Msa0296090:intron | 40.0% |
| TGACAGCTAACTAACTACCA+AGG | - | chr2_3:48944423-48944442 | None:intergenic | 40.0% | |
| GGCTAAGACGCTAAGTTAAA+AGG | + | chr2_3:48944596-48944615 | Msa0296090:intron | 40.0% | |
| CACGTGTTGTAAAAGATAGG+AGG | + | chr2_3:48944627-48944646 | Msa0296090:intron | 40.0% | |
| ! | TCGTACACTTTTACTTGTGG+TGG | - | chr2_3:48944789-48944808 | None:intergenic | 40.0% |
| GCGATGCAGAACAAACTTAA+AGG | + | chr2_3:48945093-48945112 | Msa0296090:intron | 40.0% | |
| TCCTTTACAAACGTATCAGG+CGG | + | chr2_3:48945531-48945550 | Msa0296090:intron | 40.0% | |
| ACTACAGTTTGCGAATACCA+AGG | + | chr2_3:48945702-48945721 | Msa0296090:CDS | 40.0% | |
| ! | ATGTGTTTTGTGGAGCAACT+AGG | + | chr2_3:48945798-48945817 | Msa0296090:intron | 40.0% |
| TCATCACACGTTCCCATATT+TGG | + | chr2_3:48946009-48946028 | Msa0296090:intron | 40.0% | |
| ! | ACTCAGACTAGTTCTTGACT+TGG | + | chr2_3:48946047-48946066 | Msa0296090:intron | 40.0% |
| ! | GGTCTTATAAATAGGGATGG+AGG | - | chr2_3:48946555-48946574 | None:intergenic | 40.0% |
| ! | ACGGGTCTTATAAATAGGGA+TGG | - | chr2_3:48946558-48946577 | None:intergenic | 40.0% |
| CCCTATTTATAAGACCCGTT+TGG | + | chr2_3:48946559-48946578 | Msa0296090:intron | 40.0% | |
| ACATTGACGAAGCATGACAA+AGG | - | chr2_3:48947176-48947195 | None:intergenic | 40.0% | |
| GATGTTCTCTTATGACAGGA+TGG | + | chr2_3:48947335-48947354 | Msa0296090:intron | 40.0% | |
| GGGATATTACTTATGACGAC+TGG | + | chr2_3:48947361-48947380 | Msa0296090:CDS | 40.0% | |
| ACAAACTACATTCAACGCAG+GGG | - | chr2_3:48947850-48947869 | None:intergenic | 40.0% | |
| GACAAACTACATTCAACGCA+GGG | - | chr2_3:48947851-48947870 | None:intergenic | 40.0% | |
| ! | CGTTGAATGTAGTTTGTCGA+AGG | + | chr2_3:48947853-48947872 | Msa0296090:CDS | 40.0% |
| CGAACCCTGTATTGAATTTG+TGG | + | chr2_3:48947950-48947969 | Msa0296090:intron | 40.0% | |
| !! | TAACGGTTTTGGCATGTAGT+AGG | + | chr2_3:48948209-48948228 | Msa0296090:intron | 40.0% |
| CTGTTATAAGGCAAATGTGC+TGG | + | chr2_3:48948394-48948413 | Msa0296090:intron | 40.0% | |
| ACACGTCATAATTGAATCCG+AGG | + | chr2_3:48948500-48948519 | Msa0296090:intron | 40.0% | |
| TTTGTAGGAAGTCACAGCAT+TGG | + | chr2_3:48948583-48948602 | Msa0296090:intron | 40.0% | |
| !! | CATTGGAGTTTGATGGTGAT+GGG | + | chr2_3:48948600-48948619 | Msa0296090:CDS | 40.0% |
| !! | ATTGGAGTTTGATGGTGATG+GGG | + | chr2_3:48948601-48948620 | Msa0296090:CDS | 40.0% |
| TGACATGTGTGACAAACTCA+TGG | - | chr2_3:48948818-48948837 | None:intergenic | 40.0% | |
| GAGCTTACCAAATTTGAGCT+AGG | + | chr2_3:48948872-48948891 | Msa0296090:intron | 40.0% | |
| GTCACATCCTAGCTCAAATT+TGG | - | chr2_3:48948882-48948901 | None:intergenic | 40.0% | |
| !! | GAGAAAAGGTGTTACTCGAA+AGG | - | chr2_3:48948904-48948923 | None:intergenic | 40.0% |
| ATCACACATGAAACTCAAGG+CGG | - | chr2_3:48948976-48948995 | None:intergenic | 40.0% | |
| CCTATCACACATGAAACTCA+AGG | - | chr2_3:48948979-48948998 | None:intergenic | 40.0% | |
| CCTTGAGTTTCATGTGTGAT+AGG | + | chr2_3:48948976-48948995 | Msa0296090:intron | 40.0% | |
| ! | AACATATAACCAGGGGTATG+TGG | - | chr2_3:48949111-48949130 | None:intergenic | 40.0% |
| GCTCCATATTGGACATAAAG+TGG | + | chr2_3:48949334-48949353 | Msa0296090:CDS | 40.0% | |
| CATCGTACTCTTAACTTCGA+AGG | + | chr2_3:48949357-48949376 | Msa0296090:CDS | 40.0% | |
| TAATCAGAGAACATGAGAGC+AGG | - | chr2_3:48949453-48949472 | None:intergenic | 40.0% | |
| TCGAGGGGTAGAGATAAATT+TGG | - | chr2_3:48949490-48949509 | None:intergenic | 40.0% | |
| GTAGGCTAGAAAAGAGATGA+TGG | + | chr2_3:48949763-48949782 | Msa0296090:intron | 40.0% | |
| TTGGGAGAAGATATTCAGCT+AGG | + | chr2_3:48949808-48949827 | Msa0296090:intron | 40.0% | |
| TCAATGTCTCATTGAGTGCA+GGG | - | chr2_3:48950100-48950119 | None:intergenic | 40.0% | |
| ATCTATCCCTGCATTCAATG+AGG | + | chr2_3:48950146-48950165 | Msa0296090:intron | 40.0% | |
| ! | ATGCTATGTTTAGATGGGCT+TGG | + | chr2_3:48951023-48951042 | Msa0296090:intron | 40.0% |
| TGATAGCTAACTGTTAAGGG+AGG | - | chr2_3:48951078-48951097 | None:intergenic | 40.0% | |
| CATCCGATACTACTCGATAT+GGG | + | chr2_3:48951137-48951156 | Msa0296090:intron | 40.0% | |
| AGTCCCATATCGAGTAGTAT+CGG | - | chr2_3:48951143-48951162 | None:intergenic | 40.0% | |
| ATACTACTCGATATGGGACT+TGG | + | chr2_3:48951143-48951162 | Msa0296090:intron | 40.0% | |
| TACTACTCGATATGGGACTT+GGG | + | chr2_3:48951144-48951163 | Msa0296090:intron | 40.0% | |
| AGGCACTCTAATTGGGAATT+GGG | - | chr2_3:48951182-48951201 | None:intergenic | 40.0% | |
| ! | AAGGCACTCTAATTGGGAAT+TGG | - | chr2_3:48951183-48951202 | None:intergenic | 40.0% |
| AATGACGTGTGTACATTTCC+TGG | + | chr2_3:48951323-48951342 | Msa0296090:CDS | 40.0% | |
| AGGGATGGTATGATGTAAGA+TGG | - | chr2_3:48951389-48951408 | None:intergenic | 40.0% | |
| TCTTACATCATACCATCCCT+CGG | + | chr2_3:48951389-48951408 | Msa0296090:CDS | 40.0% | |
| TTTACAGGAGGAACTAGAGA+TGG | + | chr2_3:48951537-48951556 | Msa0296090:intron | 40.0% | |
| TTACAGGAGGAACTAGAGAT+GGG | + | chr2_3:48951538-48951557 | Msa0296090:intron | 40.0% | |
| !! | TAAGTACATTGGTGCCAATC+AGG | - | chr2_3:48951636-48951655 | None:intergenic | 40.0% |
| !! | CATGTAGGCTCTAAGTACAT+TGG | - | chr2_3:48951647-48951666 | None:intergenic | 40.0% |
| TACTTAGAGCCTACATGCAT+GGG | + | chr2_3:48951650-48951669 | Msa0296090:CDS | 40.0% | |
| !!! | TTTTAGGGAAGCATCTTCCT+TGG | + | chr2_3:48951967-48951986 | Msa0296090:intron | 40.0% |
| ! | GAACTTGAGCTAGTTTCATG+TGG | + | chr2_3:48952052-48952071 | Msa0296090:intron | 40.0% |
| AGGTGCTAACAATCATGCAA+TGG | + | chr2_3:48952155-48952174 | Msa0296090:intron | 40.0% | |
| TGCTAACAATCATGCAATGG+TGG | + | chr2_3:48952158-48952177 | Msa0296090:intron | 40.0% | |
| AGAATTTATACGAACGACGC+TGG | + | chr2_3:48952252-48952271 | Msa0296090:intron | 40.0% | |
| GTAGTTCCTGTAGGATTTCA+GGG | - | chr2_3:48952296-48952315 | None:intergenic | 40.0% | |
| AGTAGTTCCTGTAGGATTTC+AGG | - | chr2_3:48952297-48952316 | None:intergenic | 40.0% | |
| GCCCAAACTCATTTAAACAG+GGG | - | chr2_3:48952348-48952367 | None:intergenic | 40.0% | |
| CAACACTCAGAATGCAATCT+AGG | - | chr2_3:48952584-48952603 | None:intergenic | 40.0% | |
| ACAAAAGCAGAATCTAGGTC+AGG | - | chr2_3:48952975-48952994 | None:intergenic | 40.0% | |
| ATTCTTGCAGGCAGAAGATA+TGG | + | chr2_3:48953014-48953033 | Msa0296090:intron | 40.0% | |
| AGTCTCAACCGTAATTCTTG+AGG | - | chr2_3:48953106-48953125 | None:intergenic | 40.0% | |
| AAGTGATTGATGCATTGCCA+TGG | - | chr2_3:48953208-48953227 | None:intergenic | 40.0% | |
| ! | GCTAAGCCCTTTCTTTTTCT+TGG | - | chr2_3:48953355-48953374 | None:intergenic | 40.0% |
| !!! | GTTTGCTTTTTAGCACCCAT+GGG | - | chr2_3:48953875-48953894 | None:intergenic | 40.0% |
| !!! | TGTTTGCTTTTTAGCACCCA+TGG | - | chr2_3:48953876-48953895 | None:intergenic | 40.0% |
| ! | TCTGATGACGATCTAAGTCT+AGG | + | chr2_3:48953929-48953948 | Msa0296090:CDS | 40.0% |
| AGATGAGGAATCACTTCCTA+TGG | + | chr2_3:48954309-48954328 | Msa0296090:CDS | 40.0% | |
| GATGAGGAATCACTTCCTAT+GGG | + | chr2_3:48954310-48954329 | Msa0296090:CDS | 40.0% | |
| GTGGAATATGAGAGGATTGT+CGG | - | chr2_3:48954363-48954382 | None:intergenic | 40.0% | |
| TAACCTTCACTTCGAGAAAC+AGG | + | chr2_3:48954419-48954438 | Msa0296090:CDS | 40.0% | |
| AACCTTCACTTCGAGAAACA+GGG | + | chr2_3:48954420-48954439 | Msa0296090:CDS | 40.0% | |
| ! | ATTGAACTCCCCTCTTTTTC+CGG | - | chr2_3:48954486-48954505 | None:intergenic | 40.0% |
| GTAAAGATCAGGCAAGATCT+GGG | - | chr2_3:48954654-48954673 | None:intergenic | 40.0% | |
| CAGATCTTGCCTGATCTTTA+CGG | + | chr2_3:48954653-48954672 | Msa0296090:three_prime_UTR | 40.0% | |
| TTTCCCTTGTTAAGGGGAAA+GGG | + | chr2_3:48954804-48954823 | Msa0296090:three_prime_UTR | 40.0% | |
| ! | GGAAGAGGTTCAAGTTATCA+CGG | + | chr2_3:48954826-48954845 | Msa0296090:three_prime_UTR | 40.0% |
| ! | GAAGAGGTTCAAGTTATCAC+GGG | + | chr2_3:48954827-48954846 | Msa0296090:three_prime_UTR | 40.0% |
| TCTCCAGCATAAAACCCAAC+CGG | + | chr2_3:48943380-48943399 | Msa0296090:five_prime_UTR | 45.0% | |
| !! | AGAGGTGTTCGTAGGGTTTA+GGG | - | chr2_3:48943406-48943425 | None:intergenic | 45.0% |
| AGGACAAAGAGAACACACGA+CGG | - | chr2_3:48943436-48943455 | None:intergenic | 45.0% | |
| TATGAAAGAGAGAGAGCTGC+CGG | - | chr2_3:48943485-48943504 | None:intergenic | 45.0% | |
| GGAATCCATGAAGCAAGTGA+AGG | - | chr2_3:48943596-48943615 | None:intergenic | 45.0% | |
| GCAATGATGAATTCGCCATC+AGG | - | chr2_3:48943838-48943857 | None:intergenic | 45.0% | |
| GGCGAATTCATCATTGCTTC+AGG | + | chr2_3:48943841-48943860 | Msa0296090:CDS | 45.0% | |
| ACACAAGAGCTTAAGCCAGT+AGG | + | chr2_3:48944197-48944216 | Msa0296090:intron | 45.0% | |
| AGCTGTCAAACAAGTCACAG+TGG | + | chr2_3:48944435-48944454 | Msa0296090:intron | 45.0% | |
| ! | TTGCATTTCCTGCTGGTTGT+GGG | - | chr2_3:48944485-48944504 | None:intergenic | 45.0% |
| ! | TTTGCATTTCCTGCTGGTTG+TGG | - | chr2_3:48944486-48944505 | None:intergenic | 45.0% |
| ACCAGCAGGAAATGCAAACT+AGG | + | chr2_3:48944488-48944507 | Msa0296090:intron | 45.0% | |
| ! | TCCTAGTTTGCATTTCCTGC+TGG | - | chr2_3:48944492-48944511 | None:intergenic | 45.0% |
| ACCGCCTGATACGTTTGTAA+AGG | - | chr2_3:48945535-48945554 | None:intergenic | 45.0% | |
| TAAATAGGTAGGGAGGGAGT+AGG | + | chr2_3:48946812-48946831 | Msa0296090:intron | 45.0% | |
| TGCACTGCTTGGTTATCAGT+TGG | + | chr2_3:48947026-48947045 | Msa0296090:intron | 45.0% | |
| GCGGCTACTCATAAGATAAC+TGG | - | chr2_3:48947215-48947234 | None:intergenic | 45.0% | |
| TCTCTTATGACAGGATGGGA+AGG | + | chr2_3:48947340-48947359 | Msa0296090:intron | 45.0% | |
| CTCTTATGACAGGATGGGAA+GGG | + | chr2_3:48947341-48947360 | Msa0296090:intron | 45.0% | |
| TCTGTAAAGATCTGGGGAAG+AGG | - | chr2_3:48947409-48947428 | None:intergenic | 45.0% | |
| CGACAAACTACATTCAACGC+AGG | - | chr2_3:48947852-48947871 | None:intergenic | 45.0% | |
| CGACTGAAGATCTTACACGT+GGG | - | chr2_3:48948058-48948077 | None:intergenic | 45.0% | |
| CCACGTGTAAGATCTTCAGT+CGG | + | chr2_3:48948056-48948075 | Msa0296090:CDS | 45.0% | |
| GTCGGTAGAATTGATGCTGT+CGG | + | chr2_3:48948074-48948093 | Msa0296090:CDS | 45.0% | |
| CTGTTATCGATCCCAGATAG+CGG | + | chr2_3:48948158-48948177 | Msa0296090:intron | 45.0% | |
| !! | CGTTATCCTAGTATTGGTGC+CGG | - | chr2_3:48948194-48948213 | None:intergenic | 45.0% |
| CGGCACCAATACTAGGATAA+CGG | + | chr2_3:48948192-48948211 | Msa0296090:intron | 45.0% | |
| ! | GTCACAGCATTGGAGTTTGA+TGG | + | chr2_3:48948593-48948612 | Msa0296090:CDS | 45.0% |
| !! | GCATTGGAGTTTGATGGTGA+TGG | + | chr2_3:48948599-48948618 | Msa0296090:CDS | 45.0% |
| !! | TGGTGATGGGGACTTCTTAA+TGG | + | chr2_3:48948613-48948632 | Msa0296090:CDS | 45.0% |
| AACTCATGGAGAAGGCTCTA+TGG | - | chr2_3:48948804-48948823 | None:intergenic | 45.0% | |
| GTGTGACAAACTCATGGAGA+AGG | - | chr2_3:48948812-48948831 | None:intergenic | 45.0% | |
| TCACACATGAAACTCAAGGC+GGG | - | chr2_3:48948975-48948994 | None:intergenic | 45.0% | |
| TTCATGTGTGATAGGGATGC+TGG | + | chr2_3:48948984-48949003 | Msa0296090:intron | 45.0% | |
| TCATGTGTGATAGGGATGCT+GGG | + | chr2_3:48948985-48949004 | Msa0296090:intron | 45.0% | |
| TAGGATATGGGATCCTGACA+CGG | + | chr2_3:48949413-48949432 | Msa0296090:CDS | 45.0% | |
| ATCAGTTCACAAACCGTGTC+AGG | - | chr2_3:48949429-48949448 | None:intergenic | 45.0% | |
| CTCAATGTCTCATTGAGTGC+AGG | - | chr2_3:48950101-48950120 | None:intergenic | 45.0% | |
| AACCTGCCTCATTGAATGCA+GGG | - | chr2_3:48950155-48950174 | None:intergenic | 45.0% | |
| AAACCTGCCTCATTGAATGC+AGG | - | chr2_3:48950156-48950175 | None:intergenic | 45.0% | |
| CATCTCCGAAAGATAGGATG+TGG | - | chr2_3:48950194-48950213 | None:intergenic | 45.0% | |
| CACATCCTATCTTTCGGAGA+TGG | + | chr2_3:48950192-48950211 | Msa0296090:intron | 45.0% | |
| AGCAACCATCTCCGAAAGAT+AGG | - | chr2_3:48950200-48950219 | None:intergenic | 45.0% | |
| ! | TAATGCTAGGGAACCGATTC+AGG | + | chr2_3:48950432-48950451 | Msa0296090:intron | 45.0% |
| ! | AATGCTAGGGAACCGATTCA+GGG | + | chr2_3:48950433-48950452 | Msa0296090:intron | 45.0% |
| ATAACGAACGGACCCTGAAT+CGG | - | chr2_3:48950448-48950467 | None:intergenic | 45.0% | |
| TGACATTTGAGTAGCCTCTC+CGG | - | chr2_3:48950616-48950635 | None:intergenic | 45.0% | |
| GCATCCGATACTACTCGATA+TGG | + | chr2_3:48951136-48951155 | Msa0296090:intron | 45.0% | |
| !! | GTACTCTGTTTTCAGGGAGA+AGG | + | chr2_3:48951266-48951285 | Msa0296090:intron | 45.0% |
| GTGTGTACATTTCCTGGTAG+TGG | + | chr2_3:48951329-48951348 | Msa0296090:CDS | 45.0% | |
| AACAGGATCAAACCACTACC+AGG | - | chr2_3:48951344-48951363 | None:intergenic | 45.0% | |
| !! | TGGTAGTGGTTTGATCCTGT+TGG | + | chr2_3:48951343-48951362 | Msa0296090:CDS | 45.0% |
| TGGTATTTGGCTACAGTCCA+AGG | - | chr2_3:48951369-48951388 | None:intergenic | 45.0% | |
| GAAGAACACCATTTGGGAAC+AGG | - | chr2_3:48951416-48951435 | None:intergenic | 45.0% | |
| !! | TACATTGGTGCCAATCAGGT+GGG | - | chr2_3:48951632-48951651 | None:intergenic | 45.0% |
| GTACTTAGAGCCTACATGCA+TGG | + | chr2_3:48951649-48951668 | Msa0296090:CDS | 45.0% | |
| CTACTGCGATAGAGTAGCAA+AGG | - | chr2_3:48951894-48951913 | None:intergenic | 45.0% | |
| CTTTGCTACTCTATCGCAGT+AGG | + | chr2_3:48951892-48951911 | Msa0296090:intron | 45.0% | |
| ! | ACAATCATGCAATGGTGGAG+TGG | + | chr2_3:48952163-48952182 | Msa0296090:intron | 45.0% |
| ! | CAATCATGCAATGGTGGAGT+GGG | + | chr2_3:48952164-48952183 | Msa0296090:intron | 45.0% |
| AGGATTTCAGGGAAAGGTCT+TGG | - | chr2_3:48952285-48952304 | None:intergenic | 45.0% | |
| ACCTTTCCCTGAAATCCTAC+AGG | + | chr2_3:48952287-48952306 | Msa0296090:intron | 45.0% | |
| TCCTGTAGGATTTCAGGGAA+AGG | - | chr2_3:48952291-48952310 | None:intergenic | 45.0% | |
| TGAACGGGCCTCAAGAATTA+CGG | + | chr2_3:48953095-48953114 | Msa0296090:CDS | 45.0% | |
| GCAAGGAGCCGATTAACTTT+GGG | - | chr2_3:48953255-48953274 | None:intergenic | 45.0% | |
| TGCAAGGAGCCGATTAACTT+TGG | - | chr2_3:48953256-48953275 | None:intergenic | 45.0% | |
| CAGCATCTTCAGTTTCAAGG+AGG | - | chr2_3:48953284-48953303 | None:intergenic | 45.0% | |
| ! | GGAGGACTCTGAAGAATATC+TGG | + | chr2_3:48953841-48953860 | Msa0296090:CDS | 45.0% |
| !! | ATATCTGGCTTTGCATCCCA+TGG | + | chr2_3:48953856-48953875 | Msa0296090:CDS | 45.0% |
| !! | TATCTGGCTTTGCATCCCAT+GGG | + | chr2_3:48953857-48953876 | Msa0296090:CDS | 45.0% |
| AGATCGTCATCAGACATGAC+AGG | - | chr2_3:48953923-48953942 | None:intergenic | 45.0% | |
| ACGAGAAAACTCGAGTTCCA+AGG | + | chr2_3:48953993-48954012 | Msa0296090:CDS | 45.0% | |
| !!! | TCACACCGGTTTTCTTTTCC+AGG | + | chr2_3:48954121-48954140 | Msa0296090:intron | 45.0% |
| GCTTTCACTCTATCTCCCAT+AGG | - | chr2_3:48954328-48954347 | None:intergenic | 45.0% | |
| CAATCCTCTCATATTCCACG+TGG | + | chr2_3:48954364-48954383 | Msa0296090:CDS | 45.0% | |
| AACACCACGTGGAATATGAG+AGG | - | chr2_3:48954371-48954390 | None:intergenic | 45.0% | |
| ! | TATTCCACGTGGTGTTAAGC+AGG | + | chr2_3:48954375-48954394 | Msa0296090:CDS | 45.0% |
| ! | ATTCCACGTGGTGTTAAGCA+GGG | + | chr2_3:48954376-48954395 | Msa0296090:CDS | 45.0% |
| ! | TTGAACTCCCCTCTTTTTCC+GGG | - | chr2_3:48954485-48954504 | None:intergenic | 45.0% |
| AAGAGGGGAGTTCAATCCTT+AGG | + | chr2_3:48954490-48954509 | Msa0296090:CDS | 45.0% | |
| AGAGGGGAGTTCAATCCTTA+GGG | + | chr2_3:48954491-48954510 | Msa0296090:CDS | 45.0% | |
| TCGCAGGGACCAGTATTTAA+TGG | + | chr2_3:48954520-48954539 | Msa0296090:CDS | 45.0% | |
| GACCAGTATTTAATGGCCGT+GGG | + | chr2_3:48954527-48954546 | Msa0296090:CDS | 45.0% | |
| CGTAAAGATCAGGCAAGATC+TGG | - | chr2_3:48954655-48954674 | None:intergenic | 45.0% | |
| GTTTCCCTTGTTAAGGGGAA+AGG | + | chr2_3:48954803-48954822 | Msa0296090:three_prime_UTR | 45.0% | |
| TTCCCTTGTTAAGGGGAAAG+GGG | + | chr2_3:48954805-48954824 | Msa0296090:three_prime_UTR | 45.0% | |
| TTCCCCTTTCCCCTTAACAA+GGG | - | chr2_3:48954810-48954829 | None:intergenic | 45.0% | |
| !! | AAGTAATTTATTATTAAATA+TGG | + | chr2_3:48947562-48947581 | Msa0296090:intron | 5.0% |
| !! | ATTAAAAATTAATTTAAACA+AGG | - | chr2_3:48947623-48947642 | None:intergenic | 5.0% |
| !! | TAATTATAAATTATACAAAA+AGG | + | chr2_3:48951681-48951700 | Msa0296090:CDS | 5.0% |
| !!! | TTTATATATTTTTTGTTTTT+AGG | + | chr2_3:48951951-48951970 | Msa0296090:intron | 5.0% |
| !!! | TTATATATTTTTTGTTTTTA+GGG | + | chr2_3:48951952-48951971 | Msa0296090:intron | 5.0% |
| !! | GAGAGGTGTTCGTAGGGTTT+AGG | - | chr2_3:48943407-48943426 | None:intergenic | 50.0% |
| GATGAATTCGCCATCAGGAG+TGG | - | chr2_3:48943833-48943852 | None:intergenic | 50.0% | |
| AGGTACACTACGCCCTTCTT+TGG | + | chr2_3:48943861-48943880 | Msa0296090:intron | 50.0% | |
| ! | TTTAGGTTCCCACAACCAGC+AGG | + | chr2_3:48944474-48944493 | Msa0296090:intron | 50.0% |
| TTCTGTTGTGCTGCACTGCT+TGG | + | chr2_3:48947015-48947034 | Msa0296090:intron | 50.0% | |
| GGCTCTTGGTATCCCATATC+TGG | + | chr2_3:48947691-48947710 | Msa0296090:intron | 50.0% | |
| ATTCAACGCAGGGGATTGTG+TGG | - | chr2_3:48947841-48947860 | None:intergenic | 50.0% | |
| !! | GTTCATGGGTTAGTTGCCTG+TGG | + | chr2_3:48948002-48948021 | Msa0296090:CDS | 50.0% |
| ! | ACGTGGGTCAAAGCATTCCA+CGG | - | chr2_3:48948042-48948061 | None:intergenic | 50.0% |
| CCGACTGAAGATCTTACACG+TGG | - | chr2_3:48948059-48948078 | None:intergenic | 50.0% | |
| ATTGATGCTGTCGGACCTAG+TGG | + | chr2_3:48948083-48948102 | Msa0296090:CDS | 50.0% | |
| ! | ACCTAGTGGTGATGTTGACC+AGG | + | chr2_3:48948097-48948116 | Msa0296090:CDS | 50.0% |
| ACCTGGTCAACATCACCACT+AGG | - | chr2_3:48948101-48948120 | None:intergenic | 50.0% | |
| !! | TGACGGTTTTGGCATGTAGC+AGG | + | chr2_3:48948262-48948281 | Msa0296090:intron | 50.0% |
| GGATCACAATCTTGTGCACG+TGG | + | chr2_3:48948415-48948434 | Msa0296090:intron | 50.0% | |
| GGGGACTTCTTAATGGCTGT+TGG | + | chr2_3:48948620-48948639 | Msa0296090:CDS | 50.0% | |
| TGTTGGAAGCAGTGCAGGAA+AGG | + | chr2_3:48948637-48948656 | Msa0296090:CDS | 50.0% | |
| GAAGCAGTGCAGGAAAGGTA+TGG | + | chr2_3:48948642-48948661 | Msa0296090:intron | 50.0% | |
| ATGAAACTCAAGGCGGGACA+TGG | - | chr2_3:48948969-48948988 | None:intergenic | 50.0% | |
| CATGTGTGATAGGGATGCTG+GGG | + | chr2_3:48948986-48949005 | Msa0296090:intron | 50.0% | |
| CTAGCTAAACCACATACCCC+TGG | + | chr2_3:48949099-48949118 | Msa0296090:intron | 50.0% | |
| CAGGTATGGCAGCTCCATAT+TGG | + | chr2_3:48949323-48949342 | Msa0296090:intron | 50.0% | |
| ! | AGTAGGAGATTGGCTGCAGT+AGG | + | chr2_3:48949745-48949764 | Msa0296090:intron | 50.0% |
| ATCCCTGCATTCAATGAGGC+AGG | + | chr2_3:48950150-48950169 | Msa0296090:intron | 50.0% | |
| ! | ACTGCTGAGCATGTGCTACT+AGG | + | chr2_3:48950825-48950844 | Msa0296090:intron | 50.0% |
| AAGTCAGCACCTCCATACTG+TGG | + | chr2_3:48950920-48950939 | Msa0296090:intron | 50.0% | |
| ! | ACCTCCATACTGTGGTTTGC+TGG | + | chr2_3:48950928-48950947 | Msa0296090:intron | 50.0% |
| ACCAGCAAACCACAGTATGG+AGG | - | chr2_3:48950932-48950951 | None:intergenic | 50.0% | |
| GTGACCAGCAAACCACAGTA+TGG | - | chr2_3:48950935-48950954 | None:intergenic | 50.0% | |
| ! | GAGTAGTATCGGATGCTCAG+TGG | - | chr2_3:48951132-48951151 | None:intergenic | 50.0% |
| ! | TGGTTTGATCCTGTTGGCCT+TGG | + | chr2_3:48951349-48951368 | Msa0296090:CDS | 50.0% |
| !! | GTACATTGGTGCCAATCAGG+TGG | - | chr2_3:48951633-48951652 | None:intergenic | 50.0% |
| TGTGGTCATGTCTGCAACTG+TGG | + | chr2_3:48952070-48952089 | Msa0296090:intron | 50.0% | |
| TTTCAGGGAAAGGTCTTGGC+AGG | - | chr2_3:48952281-48952300 | None:intergenic | 50.0% | |
| CTTGCAGGCAGAAGATATGG+CGG | + | chr2_3:48953017-48953036 | Msa0296090:intron | 50.0% | |
| TTGCAGGCAGAAGATATGGC+GGG | + | chr2_3:48953018-48953037 | Msa0296090:intron | 50.0% | |
| TCAGGAGAGAAAAGGGCTGA+GGG | - | chr2_3:48953482-48953501 | None:intergenic | 50.0% | |
| ATCAGGAGAGAAAAGGGCTG+AGG | - | chr2_3:48953483-48953502 | None:intergenic | 50.0% | |
| TAAGGATGAGCAGCATGCAG+AGG | + | chr2_3:48954261-48954280 | Msa0296090:CDS | 50.0% | |
| !!! | AGCAGCATGCAGAGGCATTT+TGG | + | chr2_3:48954269-48954288 | Msa0296090:CDS | 50.0% |
| ! | GTTATTTCCCGTGATCCTCC+AGG | - | chr2_3:48954403-48954422 | None:intergenic | 50.0% |
| ! | TGCCCTGTTTCTCGAAGTGA+AGG | - | chr2_3:48954425-48954444 | None:intergenic | 50.0% |
| AAGTGGAACCCCGGAAAAAG+AGG | + | chr2_3:48954473-48954492 | Msa0296090:CDS | 50.0% | |
| AGTGGAACCCCGGAAAAAGA+GGG | + | chr2_3:48954474-48954493 | Msa0296090:CDS | 50.0% | |
| ! | TGAACTCCCCTCTTTTTCCG+GGG | - | chr2_3:48954484-48954503 | None:intergenic | 50.0% |
| GGACCAGTATTTAATGGCCG+TGG | + | chr2_3:48954526-48954545 | Msa0296090:CDS | 50.0% | |
| TGCCTGATCTTTACGGTGTC+TGG | + | chr2_3:48954660-48954679 | Msa0296090:three_prime_UTR | 50.0% | |
| TGCCAGACACCGTAAAGATC+AGG | - | chr2_3:48954665-48954684 | None:intergenic | 50.0% | |
| GATCTTTACGGTGTCTGGCA+TGG | + | chr2_3:48954665-48954684 | Msa0296090:three_prime_UTR | 50.0% | |
| CTTCCCCTTTCCCCTTAACA+AGG | - | chr2_3:48954811-48954830 | None:intergenic | 50.0% | |
| TGTTAAGGGGAAAGGGGAAG+AGG | + | chr2_3:48954811-48954830 | Msa0296090:three_prime_UTR | 50.0% | |
| ! | GTGTTCGTAGGGTTTAGGGC+CGG | - | chr2_3:48943402-48943421 | None:intergenic | 55.0% |
| !! | GAAGATTCGATGGCGGAGGA+CGG | - | chr2_3:48943461-48943480 | None:intergenic | 55.0% |
| CTCCGCCATCGAATCTTCTC+CGG | + | chr2_3:48943463-48943482 | Msa0296090:intron | 55.0% | |
| TGCCGGAGAAGATTCGATGG+CGG | - | chr2_3:48943468-48943487 | None:intergenic | 55.0% | |
| AGCTGCCGGAGAAGATTCGA+TGG | - | chr2_3:48943471-48943490 | None:intergenic | 55.0% | |
| GCAACAATGGCGACTCGTGA+CGG | + | chr2_3:48943512-48943531 | Msa0296090:exon | 55.0% | |
| AGTGTACGAAGTCAGGGAGC+TGG | + | chr2_3:48944800-48944819 | Msa0296090:CDS | 55.0% | |
| GTGTACGAAGTCAGGGAGCT+GGG | + | chr2_3:48944801-48944820 | Msa0296090:CDS | 55.0% | |
| AGGGAGGGAGTAGGAAGTTG+TGG | + | chr2_3:48946821-48946840 | Msa0296090:intron | 55.0% | |
| AGGGGATTGTGTGGTAAGGG+AGG | - | chr2_3:48947832-48947851 | None:intergenic | 55.0% | |
| CGCAGGGGATTGTGTGGTAA+GGG | - | chr2_3:48947835-48947854 | None:intergenic | 55.0% | |
| ACGCAGGGGATTGTGTGGTA+AGG | - | chr2_3:48947836-48947855 | None:intergenic | 55.0% | |
| !! | CATGGGTTAGTTGCCTGTGG+CGG | + | chr2_3:48948005-48948024 | Msa0296090:CDS | 55.0% |
| ATGGCTGTTGGAAGCAGTGC+AGG | + | chr2_3:48948632-48948651 | Msa0296090:CDS | 55.0% | |
| AGGGATGCTGGGGTATGTGA+TGG | + | chr2_3:48948996-48949015 | Msa0296090:intron | 55.0% | |
| ! | ACCAGCATTGAGCCGACAAC+AGG | + | chr2_3:48951293-48951312 | Msa0296090:CDS | 55.0% |
| !! | TCCTGTTGTCGGCTCAATGC+TGG | - | chr2_3:48951297-48951316 | None:intergenic | 55.0% |
| CCATTTGGGAACAGGTCCGA+GGG | - | chr2_3:48951408-48951427 | None:intergenic | 55.0% | |
| ACCATTTGGGAACAGGTCCG+AGG | - | chr2_3:48951409-48951428 | None:intergenic | 55.0% | |
| CAGGAGGAACTAGAGATGGG+TGG | + | chr2_3:48951541-48951560 | Msa0296090:intron | 55.0% | |
| TTTCAAGGAGGCGAGCTGCA+AGG | - | chr2_3:48953272-48953291 | None:intergenic | 55.0% | |
| CAGGAGAGAAAAGGGCTGAG+GGG | - | chr2_3:48953481-48953500 | None:intergenic | 55.0% | |
| GTGGAACCCCGGAAAAAGAG+GGG | + | chr2_3:48954475-48954494 | Msa0296090:CDS | 55.0% | |
| ATCCTTAGGGCTCAAGTCGC+AGG | + | chr2_3:48954504-48954523 | Msa0296090:CDS | 55.0% | |
| TCCTTAGGGCTCAAGTCGCA+GGG | + | chr2_3:48954505-48954524 | Msa0296090:CDS | 55.0% | |
| CGCCCACGGCCATTAAATAC+TGG | - | chr2_3:48954532-48954551 | None:intergenic | 55.0% | |
| GTATTTAATGGCCGTGGGCG+TGG | + | chr2_3:48954532-48954551 | Msa0296090:CDS | 55.0% | |
| ACTATCGACGTCCTCTCCCA+CGG | - | chr2_3:48954597-48954616 | None:intergenic | 55.0% | |
| !! | GGGCCGGTTGGGTTTTATGC+TGG | - | chr2_3:48943386-48943405 | None:intergenic | 60.0% |
| ! | CGTAGGGTTTAGGGCCGGTT+GGG | - | chr2_3:48943397-48943416 | None:intergenic | 60.0% |
| ! | TCGTAGGGTTTAGGGCCGGT+TGG | - | chr2_3:48943398-48943417 | None:intergenic | 60.0% |
| !! | CGCACGGAGAGGTGTTCGTA+GGG | - | chr2_3:48943413-48943432 | None:intergenic | 60.0% |
| AGAGAACACACGACGGCGCA+CGG | - | chr2_3:48943429-48943448 | None:intergenic | 60.0% | |
| ! | CGGAGAAGATTCGATGGCGG+AGG | - | chr2_3:48943465-48943484 | None:intergenic | 60.0% |
| ACAATGGCGACTCGTGACGG+AGG | + | chr2_3:48943515-48943534 | Msa0296090:exon | 60.0% | |
| GTTGCCTGTGGCGGTGAAGA+TGG | + | chr2_3:48948014-48948033 | Msa0296090:CDS | 60.0% | |
| GAGCAGCCGGCACCAATACT+AGG | + | chr2_3:48948185-48948204 | Msa0296090:intron | 60.0% | |
| GGCTACAGTCCAAGGCCAAC+AGG | - | chr2_3:48951361-48951380 | None:intergenic | 60.0% | |
| TTGGGAACAGGTCCGAGGGA+TGG | - | chr2_3:48951404-48951423 | None:intergenic | 60.0% | |
| CCCTCGGACCTGTTCCCAAA+TGG | + | chr2_3:48951405-48951424 | Msa0296090:CDS | 60.0% | |
| ! | GGGGATGCTACCGACTGTCA+AGG | - | chr2_3:48952329-48952348 | None:intergenic | 60.0% |
| GGACCCTGCTTAACACCACG+TGG | - | chr2_3:48954382-48954401 | None:intergenic | 60.0% | |
| ! | CGTGGTGTTAAGCAGGGTCC+TGG | + | chr2_3:48954382-48954401 | Msa0296090:CDS | 60.0% |
| GGTGTTAAGCAGGGTCCTGG+AGG | + | chr2_3:48954385-48954404 | Msa0296090:CDS | 60.0% | |
| AGCAGGGTCCTGGAGGATCA+CGG | + | chr2_3:48954392-48954411 | Msa0296090:CDS | 60.0% | |
| TCCCTGCGACTTGAGCCCTA+AGG | - | chr2_3:48954509-48954528 | None:intergenic | 60.0% | |
| !! | GCGCACGGAGAGGTGTTCGT+AGG | - | chr2_3:48943414-48943433 | None:intergenic | 65.0% |
| !! | TTCGATGGCGGAGGACGGTG+AGG | - | chr2_3:48943456-48943475 | None:intergenic | 65.0% |
| GGCACCATCTTCACCGCCAC+AGG | - | chr2_3:48948021-48948040 | None:intergenic | 65.0% | |
| ! | TGGCGGTGAAGATGGTGCCG+TGG | + | chr2_3:48948022-48948041 | Msa0296090:CDS | 65.0% |
| GCTGCTCTGCGCCGCTATCT+GGG | - | chr2_3:48948172-48948191 | None:intergenic | 65.0% | |
| ! | AGATAGCGGCGCAGAGCAGC+CGG | + | chr2_3:48948172-48948191 | Msa0296090:intron | 65.0% |
| GAACAGGACGTGACGAGCGC+AGG | - | chr2_3:48949196-48949215 | None:intergenic | 65.0% | |
| GCAGGGTCCTGGAGGATCAC+GGG | + | chr2_3:48954393-48954412 | Msa0296090:CDS | 65.0% | |
| ACACACGACGGCGCACGGAG+AGG | - | chr2_3:48943424-48943443 | None:intergenic | 70.0% | |
| GGCTGCTCTGCGCCGCTATC+TGG | - | chr2_3:48948173-48948192 | None:intergenic | 70.0% | |
| GCCGTGGGAGAGGGAACCGT+GGG | + | chr2_3:48954566-48954585 | Msa0296090:CDS | 70.0% | |
| CCCCACGGTTCCCTCTCCCA+CGG | - | chr2_3:48954570-48954589 | None:intergenic | 70.0% | |
| CCGTGGGAGAGGGAACCGTG+GGG | + | chr2_3:48954567-48954586 | Msa0296090:CDS | 70.0% | |
| CGTGGGAGAGGGAACCGTGG+GGG | + | chr2_3:48954568-48954587 | Msa0296090:CDS | 70.0% | |
| AATGGCCGTGGGCGTGGCCG+TGG | + | chr2_3:48954538-48954557 | Msa0296090:CDS | 75.0% | |
| ATGGCCGTGGGCGTGGCCGT+GGG | + | chr2_3:48954539-48954558 | Msa0296090:CDS | 75.0% | |
| CTCTCCCACGGCCACCCCCA+CGG | - | chr2_3:48954558-48954577 | None:intergenic | 75.0% | |
| GTGGGGGTGGCCGTGGGAGA+GGG | + | chr2_3:48954557-48954576 | Msa0296090:CDS | 75.0% | |
| GGCCGTGGGAGAGGGAACCG+TGG | + | chr2_3:48954565-48954584 | Msa0296090:CDS | 75.0% | |
| GGGAGAGGGAACCGTGGGGG+TGG | + | chr2_3:48954571-48954590 | Msa0296090:CDS | 75.0% | |
| GGAACCGTGGGGGTGGCCGT+GGG | + | chr2_3:48954578-48954597 | Msa0296090:CDS | 75.0% | |
| CTCTCCCACGGCCACCCCCA+CGG | - | chr2_3:48954558-48954577 | None:intergenic | 75.0% | |
| ! | TGGCCGTGGGCGTGGCCGTG+GGG | + | chr2_3:48954540-48954559 | Msa0296090:CDS | 80.0% |
| ! | CACCCCCACGGCCACGCCCA+CGG | - | chr2_3:48954546-48954565 | None:intergenic | 80.0% |
| ! | GTGGCCGTGGGGGTGGCCGT+GGG | + | chr2_3:48954551-48954570 | Msa0296090:CDS | 80.0% |
| ! | CGTGGGGGTGGCCGTGGGAG+AGG | + | chr2_3:48954556-48954575 | Msa0296090:CDS | 80.0% |
| ! | GGGAACCGTGGGGGTGGCCG+TGG | + | chr2_3:48954577-48954596 | Msa0296090:CDS | 80.0% |
| ! | CGTGGGGGTGGCCGTGGGAG+AGG | + | chr2_3:48954556-48954575 | Msa0296090:CDS | 80.0% |
| ! | GGCCGTGGGCGTGGCCGTGG+GGG | + | chr2_3:48954541-48954560 | Msa0296090:CDS | 85.0% |
| ! | CGTGGGCGTGGCCGTGGGGG+TGG | + | chr2_3:48954544-48954563 | Msa0296090:CDS | 85.0% |
| ! | CGTGGCCGTGGGGGTGGCCG+TGG | + | chr2_3:48954550-48954569 | Msa0296090:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 48943378 | 48954971 | 48943378 | ID=Msa0296090;Name=Msa0296090 |
| chr2_3 | mRNA | 48943378 | 48954971 | 48943378 | ID=Msa0296090-mRNA-1;Parent=Msa0296090;Name=Msa0296090-mRNA-1;_AED=0.09;_eAED=0.09;_QI=102|1|1|1|0.93|0.88|17|356|696 |
| chr2_3 | exon | 48943378 | 48943430 | 48943378 | ID=Msa0296090-mRNA-1:exon:15400;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48943469 | 48943650 | 48943469 | ID=Msa0296090-mRNA-1:exon:15401;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48943764 | 48943862 | 48943764 | ID=Msa0296090-mRNA-1:exon:15402;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48944778 | 48944869 | 48944778 | ID=Msa0296090-mRNA-1:exon:15403;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48945623 | 48945723 | 48945623 | ID=Msa0296090-mRNA-1:exon:15404;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48947353 | 48947443 | 48947353 | ID=Msa0296090-mRNA-1:exon:15405;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48947816 | 48947874 | 48947816 | ID=Msa0296090-mRNA-1:exon:15406;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48947998 | 48948118 | 48947998 | ID=Msa0296090-mRNA-1:exon:15407;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48948590 | 48948658 | 48948590 | ID=Msa0296090-mRNA-1:exon:15408;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48949179 | 48949231 | 48949179 | ID=Msa0296090-mRNA-1:exon:15409;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48949326 | 48949434 | 48949326 | ID=Msa0296090-mRNA-1:exon:15410;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48951281 | 48951451 | 48951281 | ID=Msa0296090-mRNA-1:exon:15411;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48951544 | 48951702 | 48951544 | ID=Msa0296090-mRNA-1:exon:15412;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48953024 | 48953116 | 48953024 | ID=Msa0296090-mRNA-1:exon:15413;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48953237 | 48953422 | 48953237 | ID=Msa0296090-mRNA-1:exon:15414;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48953827 | 48954014 | 48953827 | ID=Msa0296090-mRNA-1:exon:15415;Parent=Msa0296090-mRNA-1 |
| chr2_3 | exon | 48954249 | 48954971 | 48954249 | ID=Msa0296090-mRNA-1:exon:15416;Parent=Msa0296090-mRNA-1 |
| chr2_3 | five_prime_UTR | 48943378 | 48943430 | 48943378 | ID=Msa0296090-mRNA-1:five_prime_utr;Parent=Msa0296090-mRNA-1 |
| chr2_3 | five_prime_UTR | 48943469 | 48943517 | 48943469 | ID=Msa0296090-mRNA-1:five_prime_utr;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48943518 | 48943650 | 48943518 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48943764 | 48943862 | 48943764 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48944778 | 48944869 | 48944778 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48945623 | 48945723 | 48945623 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48947353 | 48947443 | 48947353 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48947816 | 48947874 | 48947816 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48947998 | 48948118 | 48947998 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48948590 | 48948658 | 48948590 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48949179 | 48949231 | 48949179 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48949326 | 48949434 | 48949326 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48951281 | 48951451 | 48951281 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48951544 | 48951702 | 48951544 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48953024 | 48953116 | 48953024 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48953237 | 48953422 | 48953237 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48953827 | 48954014 | 48953827 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | CDS | 48954249 | 48954615 | 48954249 | ID=Msa0296090-mRNA-1:cds;Parent=Msa0296090-mRNA-1 |
| chr2_3 | three_prime_UTR | 48954616 | 48954971 | 48954616 | ID=Msa0296090-mRNA-1:three_prime_utr;Parent=Msa0296090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
