AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0297090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0297090 MtrunA17_Chr2g0320301 97.072 683 20 0 1 683 446 1128 0.0 1390
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 283 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATCTCTTTCCTTATTTA+TGG 0.074599 2_3:-50741960 None:intergenic
TGCTGTATCTTTCTTATTCC+TGG 0.184403 2_3:-50742221 None:intergenic
GGGAAACAAAGTTCTGTAAT+TGG 0.219748 2_3:+50741218 Msa0297090:CDS
GGTCCAGCAACTTCAGTTTC+TGG 0.238110 2_3:-50741029 None:intergenic
ATCTCATTTATCTTCTTCTA+TGG 0.255334 2_3:+50741841 Msa0297090:CDS
TCTTTCTGCATCCATAAATA+AGG 0.260078 2_3:+50741949 Msa0297090:CDS
TTGCAGCTGGAATGGCTCTT+TGG 0.260745 2_3:-50740602 None:intergenic
GGATCAGCGGCTGTTGATTC+AGG 0.265274 2_3:+50741431 Msa0297090:CDS
TGTGATGCTGTTTGTGTTTG+TGG 0.265991 2_3:+50739713 Msa0297090:five_prime_UTR
GTGTGAGTTTGGTGATTTAC+AGG 0.275241 2_3:+50738436 Msa0297090:five_prime_UTR
GATTCCAACGTCTTCGCTTC+TGG 0.276956 2_3:+50738236 Msa0297090:five_prime_UTR
GTCCTCACTGCAGGCGTTCC+AGG 0.284691 2_3:+50742203 Msa0297090:CDS
GCTGCTGCCTCAGTTGCTTC+TGG 0.285706 2_3:+50740324 Msa0297090:CDS
AAGAAATGTAGAACATTATC+TGG 0.296657 2_3:+50739959 Msa0297090:five_prime_UTR
CCCAATCTCATGAAAGATTC+TGG 0.297167 2_3:+50742097 Msa0297090:CDS
TGCTCTTCCATTTGGAAATC+AGG 0.309294 2_3:+50740765 Msa0297090:CDS
TTGCCTGCTACTAAAGGTTC+TGG 0.311060 2_3:+50739839 Msa0297090:five_prime_UTR
GCATTTCGCTCAATGGTAAA+AGG 0.316657 2_3:+50740702 Msa0297090:CDS
TCATGTTATCGTATATATTC+AGG 0.318082 2_3:+50739416 Msa0297090:five_prime_UTR
CTGTTAAAGAGTTCATTTAC+AGG 0.321634 2_3:+50740215 Msa0297090:five_prime_UTR
CAAGATACTGCAACGTCTAA+TGG 0.322788 2_3:-50740531 None:intergenic
TCCAGAATCTTTCATGAGAT+TGG 0.323356 2_3:-50742098 None:intergenic
GAGAAACAGAAAAGGCTAAA+TGG 0.324342 2_3:+50741179 Msa0297090:CDS
CTTCATGGTAATGGAAATAA+TGG 0.324580 2_3:+50741611 Msa0297090:CDS
TCTTATACTTCTTTGTTTCC+TGG 0.325385 2_3:+50739678 Msa0297090:five_prime_UTR
ACCGACAACGTCGTAGTAAT+CGG 0.335749 2_3:+50738161 Msa0297090:five_prime_UTR
CTTTCTGCATTCTGATTGCT+TGG 0.337994 2_3:-50741521 None:intergenic
GGAAACAAAGTTCTGTAATT+GGG 0.340093 2_3:+50741219 Msa0297090:CDS
TACTTTCGTGACCGTGATAA+GGG 0.343362 2_3:+50738329 Msa0297090:five_prime_UTR
GTGTCTCTTATGTCAGGTTT+AGG 0.344070 2_3:+50739654 Msa0297090:five_prime_UTR
TATGACATCTGTGAATATAT+TGG 0.345064 2_3:+50742066 Msa0297090:CDS
TGAGGACAGTAATTCAGAAT+TGG 0.346987 2_3:+50740851 Msa0297090:CDS
CCAGCAACAACCTCAGAAAA+AGG 0.347141 2_3:-50741410 None:intergenic
CCAGAATCTTTCATGAGATT+GGG 0.350888 2_3:-50742097 None:intergenic
GACCGCCTTTCAATTCAAAA+AGG 0.354490 2_3:+50740076 Msa0297090:five_prime_UTR
GGGCATGTTGCTAGTATTAC+AGG 0.359441 2_3:-50743204 None:intergenic
CATTAGACGTTGCAGTATCT+TGG 0.366027 2_3:+50740532 Msa0297090:CDS
AAGAGGATTGCTCTTCCATT+TGG 0.366326 2_3:+50740757 Msa0297090:CDS
TCATGTAGATAGGCAAATTT+CGG 0.368540 2_3:-50742177 None:intergenic
CCACCTTCAGATCGACTTGC+AGG 0.368854 2_3:-50739884 None:intergenic
CCACCTTGCGACCTAGCAAA+TGG 0.372194 2_3:-50739510 None:intergenic
GATGCCTGATTTCTTTCAAC+AGG 0.372742 2_3:-50741866 None:intergenic
GTTGTTGAAGAGTGTGAGTT+TGG 0.375916 2_3:+50738425 Msa0297090:five_prime_UTR
TTTACTGAGGGACCTCTTCA+TGG 0.380139 2_3:+50741596 Msa0297090:CDS
CACCTTGCGACCTAGCAAAT+GGG 0.382219 2_3:-50739509 None:intergenic
GATTCAAAATCAAACGGATC+TGG 0.383939 2_3:-50740951 None:intergenic
TGAGATGATCTGCATTTAAC+AGG 0.384043 2_3:-50741784 None:intergenic
AACGTAGTAGATTCTGTTAA+TGG 0.391659 2_3:+50738016 None:intergenic
TAATATCTAAAGATGTTCTA+AGG 0.395646 2_3:-50741325 None:intergenic
AGGCAAATTTCGGTTCAGTA+TGG 0.396309 2_3:-50742167 None:intergenic
CAAAGGAAATTGCCCACATT+AGG 0.397631 2_3:+50741470 Msa0297090:CDS
GTGGTATCTCACAGCTTAAA+AGG 0.400142 2_3:+50742260 Msa0297090:CDS
TCGTGGAGTTTACTGCGTAT+TGG 0.400692 2_3:+50741065 Msa0297090:CDS
TCGTCTCCATTCTGCACAGC+AGG 0.401644 2_3:-50741299 None:intergenic
CTGAGAAATATCTTCTGAAA+TGG 0.405842 2_3:+50741144 Msa0297090:CDS
TGTTCATGATTCGCCTTCAC+CGG 0.407894 2_3:+50738391 Msa0297090:five_prime_UTR
GGCAATTTCCTTTGCTGAAG+AGG 0.414918 2_3:-50741461 None:intergenic
AGGGGTCAAGGTTTGATACT+AGG 0.415737 2_3:+50739439 Msa0297090:five_prime_UTR
AAGTAAGCAAGACTGCTTCC+TGG 0.416772 2_3:+50741897 Msa0297090:CDS
CTCACCCTGGTGTTAGAGCT+GGG 0.417068 2_3:+50739993 Msa0297090:five_prime_UTR
GACAACAAAAGTATAAGTTT+TGG 0.418740 2_3:+50741356 Msa0297090:CDS
GTTAACCAAGTTTCAAAACT+TGG 0.420832 2_3:-50740372 None:intergenic
TTATCGAATTCTAGTACAAA+TGG 0.422039 2_3:+50739749 Msa0297090:five_prime_UTR
GTTTCAAAACTTGGAAGATC+AGG 0.422988 2_3:-50740363 None:intergenic
ATTTGAGCGTCGATGAACTT+TGG 0.425208 2_3:-50741921 None:intergenic
GTGTTTGTGGATGACTTCTC+TGG 0.426504 2_3:+50739726 Msa0297090:five_prime_UTR
GGATGGAGCGGTGGTGGTAG+TGG 0.427559 2_3:-50738108 None:intergenic
TACAAATGGGGAGGAATCTT+CGG 0.428124 2_3:+50739763 Msa0297090:five_prime_UTR
AAATATATCTCCTTTGCAGC+TGG 0.430491 2_3:-50740615 None:intergenic
GCAGATCATCTCACTGAACT+TGG 0.431147 2_3:+50741794 Msa0297090:CDS
GAGGACAGTAATTCAGAATT+GGG 0.433640 2_3:+50740852 Msa0297090:CDS
TCAGCATTCAGATGACCATT+AGG 0.434096 2_3:-50742004 None:intergenic
ACTCACCCTGGTGTTAGAGC+TGG 0.435653 2_3:+50739992 Msa0297090:five_prime_UTR
CTACCAGAAACTGAAGTTGC+TGG 0.438040 2_3:+50741026 Msa0297090:CDS
AGGTCGCAAGGTGGTGCGCC+GGG 0.438415 2_3:+50739519 Msa0297090:five_prime_UTR
ATTGCATGCATTTCGCTCAA+TGG 0.439331 2_3:+50740695 Msa0297090:CDS
AGTAGAGTTCTCTGTGCAAA+AGG 0.439945 2_3:+50740414 Msa0297090:CDS
ATCACGAAATAATTCTTCTC+CGG 0.440935 2_3:+50739593 Msa0297090:five_prime_UTR
GTCATATTTGTTTCCTTCAG+TGG 0.441447 2_3:-50742049 None:intergenic
AATGGTTCAACAGAGAGTAT+AGG 0.441973 2_3:+50741197 Msa0297090:CDS
ATGGTTCAACAGAGAGTATA+GGG 0.444903 2_3:+50741198 Msa0297090:CDS
TATCGAATTCTAGTACAAAT+GGG 0.445725 2_3:+50739750 Msa0297090:five_prime_UTR
TTACTTTCGTGACCGTGATA+AGG 0.446131 2_3:+50738328 Msa0297090:five_prime_UTR
TCCACTCTGAAGTAAGCCTT+TGG 0.451250 2_3:-50741111 None:intergenic
TTCTGGTTCAGTAGTTGTGC+TGG 0.454587 2_3:+50739856 Msa0297090:five_prime_UTR
GTAAATACCAACAGTGGCTC+TGG 0.457664 2_3:+50740270 Msa0297090:five_prime_UTR
TCTGCTGTGTCTCTTATGTC+AGG 0.459633 2_3:+50739648 Msa0297090:five_prime_UTR
GACCTGTTCAATCTTCTTCG+TGG 0.460823 2_3:+50741048 Msa0297090:CDS
TCAAATGAAAGCATTCCTAA+TGG 0.461418 2_3:+50741989 Msa0297090:CDS
TCTTCATCTTCAACGAGTAA+TGG 0.463470 2_3:-50738272 None:intergenic
TAGGTCGCAAGGTGGTGCGC+CGG 0.463699 2_3:+50739518 Msa0297090:five_prime_UTR
ACAAGTTTGCCTGCTACTAA+AGG 0.465395 2_3:+50739833 Msa0297090:five_prime_UTR
TCTGCAATATATTCAACATT+GGG 0.468155 2_3:-50741245 None:intergenic
ATGCCCTGTCGTGCAATTTG+AGG 0.468188 2_3:+50743221 Msa0297090:CDS
TCGAAACCCTTCTCCGTCTC+CGG 0.469178 2_3:+50738043 Msa0297090:five_prime_UTR
CTTGTTGAAGATGTCTTGAA+TGG 0.469288 2_3:+50740124 Msa0297090:five_prime_UTR
TGCACTCTAGACGGTAAGCC+CGG 0.469624 2_3:-50739537 None:intergenic
GTACCATCATCTAAGTATAC+AGG 0.471096 2_3:-50741680 None:intergenic
CAGTGGCTCTGGTGTTGGTA+TGG 0.475477 2_3:+50740281 Msa0297090:exon
AACCTCAGATTCCCTTCTGC+TGG 0.475971 2_3:+50740153 Msa0297090:five_prime_UTR
TTCAAAGATTCTTCCACTGC+AGG 0.479900 2_3:-50740498 None:intergenic
TCTTGGTTACAGTGTGGTAG+AGG 0.480187 2_3:+50740549 Msa0297090:CDS
CCCACATTAGGTTCAGAGAA+AGG 0.482506 2_3:+50741482 Msa0297090:CDS
ATCTGCAATATATTCAACAT+TGG 0.482852 2_3:-50741246 None:intergenic
TCGAGAACGGCCACAAGCAC+AGG 0.487125 2_3:-50740919 None:intergenic
AGTTGAATCGTCGTAGTGTT+GGG 0.487868 2_3:-50738192 None:intergenic
CGATGAGGATGGAGCGGTGG+TGG 0.489216 2_3:-50738114 None:intergenic
TGAGGACAGATCATGTAGAT+AGG 0.489860 2_3:-50742187 None:intergenic
GGAGCCTGTTGAAAGAAATC+AGG 0.489994 2_3:+50741862 Msa0297090:CDS
TGGAGCGGTGGTGGTAGTGG+TGG 0.490280 2_3:-50738105 None:intergenic
TGTACCTCAAATTGCACGAC+AGG 0.491287 2_3:-50743225 None:intergenic
GGAAATAATGGTTGCAGAGA+CGG 0.493083 2_3:+50741623 Msa0297090:CDS
AAGCATGAGATAGTGTATGT+TGG 0.493612 2_3:+50741728 Msa0297090:CDS
GGTGGTGGTAGTGGTGGAAG+TGG 0.494000 2_3:-50738099 None:intergenic
TTCTTGCATGCCTGTGCTTG+TGG 0.497540 2_3:+50740909 Msa0297090:CDS
ACCGATTACTACGACGTTGT+CGG 0.499579 2_3:-50738162 None:intergenic
TAGCCACTTGAATGTGCCTT+GGG 0.502181 2_3:-50740882 None:intergenic
GCAGGTGAAACAGTGTTCCT+TGG 0.504801 2_3:-50740480 None:intergenic
GTGGAAGGAGAAGGAGGTGG+TGG 0.506138 2_3:-50738140 None:intergenic
GTTCATGATTCGCCTTCACC+GGG 0.507299 2_3:+50738392 Msa0297090:five_prime_UTR
ATTCAAAATCAAACGGATCT+GGG 0.507385 2_3:-50740950 None:intergenic
ATTGCAGATGCAAAGAGAAC+CGG 0.508944 2_3:+50741260 Msa0297090:CDS
ACCTTTCTCTGAACCTAATG+TGG 0.510983 2_3:-50741483 None:intergenic
GGGGTCAAGGTTTGATACTA+GGG 0.511503 2_3:+50739440 Msa0297090:five_prime_UTR
GGACGGATGAGGACTCGAAC+CGG 0.512399 2_3:-50738062 None:intergenic
TCCATTCTGCACAGCAGGGT+GGG 0.513259 2_3:-50741294 None:intergenic
GAGGGACCTCTTCATGGTAA+TGG 0.514040 2_3:+50741602 Msa0297090:CDS
GACCATGACTTTCCAGCAGA+AGG 0.516578 2_3:-50740165 None:intergenic
AAGACGGTGGTGGACGGATG+AGG 0.516678 2_3:-50738073 None:intergenic
CTTGGTTACAGTGTGGTAGA+GGG 0.518830 2_3:+50740550 Msa0297090:CDS
TATCTCCTTTGCAGCTGGAA+TGG 0.519354 2_3:-50740610 None:intergenic
AATGGTCATCTGAATGCTGA+TGG 0.520631 2_3:+50742007 Msa0297090:CDS
ACATGATCTGTCCTCACTGC+AGG 0.520927 2_3:+50742194 Msa0297090:CDS
CAGAATCTTTCATGAGATTG+GGG 0.523310 2_3:-50742096 None:intergenic
GGTGGTGGCGCCGATGAGGA+TGG 0.525734 2_3:-50738125 None:intergenic
GGTGGTAGTGGTGGAAGTGG+AGG 0.525884 2_3:-50738096 None:intergenic
GAAACAGTGTTCCTTGGACG+AGG 0.526790 2_3:-50740474 None:intergenic
TGGAGTTTACTGCGTATTGG+AGG 0.526845 2_3:+50741068 Msa0297090:CDS
TTGCCTTCCTGATTTCCAAA+TGG 0.528253 2_3:-50740772 None:intergenic
GAATCTCTTGAGTTTGCCAC+AGG 0.531604 2_3:+50740100 Msa0297090:five_prime_UTR
GTTTCTGGTAGTTTGACTGC+AGG 0.533500 2_3:-50741014 None:intergenic
GAAAACCATGCATGCATCAA+AGG 0.534012 2_3:+50740820 Msa0297090:CDS
CGTTGAAGATGAAGAAGCTA+AGG 0.535014 2_3:+50738280 Msa0297090:five_prime_UTR
GTAGCCACTTGAATGTGCCT+TGG 0.535456 2_3:-50740883 None:intergenic
TGGAATCGATGACTCGGTTG+AGG 0.536205 2_3:-50738220 None:intergenic
TAACAGGAAACGATGGCCAC+GGG 0.536351 2_3:-50741768 None:intergenic
TGTGATGCTGTTAGTTTGAC+GGG 0.536739 2_3:+50740798 Msa0297090:CDS
ATCACAGGTATGCACTGTCC+AGG 0.536837 2_3:-50739696 None:intergenic
GCTTTAAAGAAGAATGTGGT+TGG 0.539930 2_3:-50741709 None:intergenic
GGTTGCTGTGGCAGCAGCAG+CGG 0.540218 2_3:+50740302 Msa0297090:CDS
GCCCCATTTGCTAGGTCGCA+AGG 0.540437 2_3:+50739507 Msa0297090:five_prime_UTR
ACCAACAGTGGCTCTGGTGT+TGG 0.540750 2_3:+50740276 Msa0297090:five_prime_UTR
AATAATTCTTCTCCGGGTAG+AGG 0.542353 2_3:+50739600 Msa0297090:five_prime_UTR
GAGTTGAATCGTCGTAGTGT+TGG 0.543493 2_3:-50738193 None:intergenic
ACAAACACAAACAGCATCAC+AGG 0.543512 2_3:-50739711 None:intergenic
AAGAGCCATTCCAGCTGCAA+AGG 0.543750 2_3:+50740605 Msa0297090:CDS
CTCCACGAAGAAGATTGAAC+AGG 0.545010 2_3:-50741050 None:intergenic
GAACCAGAACCTTTAGTAGC+AGG 0.546701 2_3:-50739842 None:intergenic
CATAAATAAGGAAAGAGATG+TGG 0.548074 2_3:+50741961 Msa0297090:CDS
ATGCTATGGCCCCATTTGCT+AGG 0.549443 2_3:+50739499 Msa0297090:five_prime_UTR
TGAACTTCATGTTGTGATGT+AGG 0.550643 2_3:-50740660 None:intergenic
TCTTCTCCGGGTAGAGGTGG+TGG 0.551955 2_3:+50739606 Msa0297090:five_prime_UTR
AAGCAATCAGAATGCAGAAA+GGG 0.553732 2_3:+50741523 Msa0297090:CDS
ACAAGCAGCAAAACATGCTA+TGG 0.554240 2_3:+50739485 Msa0297090:five_prime_UTR
GATGCAAAGAGAACCGGTGA+TGG 0.554868 2_3:+50741266 Msa0297090:CDS
GAAACAAAGTTCTGTAATTG+GGG 0.555383 2_3:+50741220 Msa0297090:CDS
GAGGCCCCAGCTCTAACACC+AGG 0.556930 2_3:-50739998 None:intergenic
TCAGCTGATTCAAAATCAAA+CGG 0.557647 2_3:-50740957 None:intergenic
TATATATTCAGGAGGGGTCA+AGG 0.558477 2_3:+50739427 Msa0297090:five_prime_UTR
ACTGCACACTACAAGAAGAA+AGG 0.558558 2_3:-50743248 None:intergenic
GCATCAAAGGCATGATGTTG+AGG 0.559418 2_3:+50740833 Msa0297090:CDS
AATTTCCTTTGCTGAAGAGG+AGG 0.559657 2_3:-50741458 None:intergenic
TCACGAAATAATTCTTCTCC+GGG 0.560343 2_3:+50739594 Msa0297090:five_prime_UTR
ATAAATAAGGAAAGAGATGT+GGG 0.561177 2_3:+50741962 Msa0297090:CDS
TATACCTAGAGAAACAGAAA+AGG 0.562099 2_3:+50741171 Msa0297090:CDS
TCCCACCCTGCTGTGCAGAA+TGG 0.563120 2_3:+50741293 Msa0297090:CDS
GTCGATCTGAAGGTGGACTT+AGG 0.563540 2_3:+50739891 Msa0297090:five_prime_UTR
GTAGAGTTCTCTGTGCAAAA+GGG 0.564088 2_3:+50740415 Msa0297090:CDS
TTACCTGTATACTTAGATGA+TGG 0.564235 2_3:+50741677 Msa0297090:CDS
TTGTTGAAGATGTCTTGAAT+GGG 0.564560 2_3:+50740125 Msa0297090:five_prime_UTR
TTATTTCCATTACCATGAAG+AGG 0.564925 2_3:-50741608 None:intergenic
GCTAGTATTACAGGAAATGC+TGG 0.565632 2_3:-50743195 None:intergenic
ACTCGAACCGGAGACGGAGA+AGG 0.566012 2_3:-50738050 None:intergenic
TCATGCCTTTGATGCATGCA+TGG 0.566486 2_3:-50740825 None:intergenic
ATTTCCTTTGCTGAAGAGGA+GGG 0.566674 2_3:-50741457 None:intergenic
ACCATGACTTTCCAGCAGAA+GGG 0.567151 2_3:-50740164 None:intergenic
GAACACTGTTTCACCTGCAG+TGG 0.569795 2_3:+50740485 Msa0297090:CDS
AGAATCTTTCATGAGATTGG+GGG 0.570692 2_3:-50742095 None:intergenic
AACGAGTTGAAGCGAAGTGA+AGG 0.571590 2_3:-50738361 None:intergenic
TCAACAACAGAATCAAATCC+CGG 0.571940 2_3:-50738410 None:intergenic
ACTACGACGTTGTCGGTGGA+AGG 0.572830 2_3:-50738155 None:intergenic
CAAGCAATCAGAATGCAGAA+AGG 0.574592 2_3:+50741522 Msa0297090:CDS
ATGTGATGCTGTTAGTTTGA+CGG 0.574946 2_3:+50740797 Msa0297090:CDS
AGAAGAATTATTTCGTGATG+AGG 0.574966 2_3:-50739589 None:intergenic
AAACAGTGCTGCAGAAGTTG+AGG 0.575106 2_3:-50740020 None:intergenic
GTCTTCTAGTTTGAGTAGTG+TGG 0.577385 2_3:+50739805 Msa0297090:five_prime_UTR
TGGAGGAAGACGGTGGTGGA+CGG 0.577646 2_3:-50738079 None:intergenic
ACAGAATCAAATCCCGGTGA+AGG 0.578325 2_3:-50738404 None:intergenic
GTGGTGGAAGTGGAGGAAGA+CGG 0.579733 2_3:-50738089 None:intergenic
ACATGAAGTTCACTTAGATA+AGG 0.580613 2_3:+50740671 Msa0297090:CDS
TGGTGTTGGTATGGTTGCTG+TGG 0.581095 2_3:+50740290 Msa0297090:exon
CGCCGATGAGGATGGAGCGG+TGG 0.582229 2_3:-50738117 None:intergenic
CTCGAACCGGAGACGGAGAA+GGG 0.583128 2_3:-50738049 None:intergenic
CTCCATTCTGCACAGCAGGG+TGG 0.584178 2_3:-50741295 None:intergenic
CGTCTCCATTCTGCACAGCA+GGG 0.584893 2_3:-50741298 None:intergenic
TCCCTTCTGCTGGAAAGTCA+TGG 0.585860 2_3:+50740163 Msa0297090:five_prime_UTR
ATCTCATGAAAGATTCTGGA+GGG 0.586419 2_3:+50742101 Msa0297090:CDS
GAAGTGGAGGAAGACGGTGG+TGG 0.587722 2_3:-50738083 None:intergenic
CGTCCTGCAAGTCGATCTGA+AGG 0.587747 2_3:+50739881 Msa0297090:five_prime_UTR
TGTGAGTTTGGTGATTTACA+GGG 0.588672 2_3:+50738437 Msa0297090:five_prime_UTR
GATTACTACGACGTTGTCGG+TGG 0.589224 2_3:-50738159 None:intergenic
AAGATGAAGAAGCTAAGGAA+TGG 0.590806 2_3:+50738285 Msa0297090:five_prime_UTR
GCAGAAGAATGCACTCTAGA+CGG 0.591703 2_3:-50739546 None:intergenic
GCGTCGATGAACTTTGGACC+AGG 0.593250 2_3:-50741915 None:intergenic
ATAAAAGAAAACCTCGTCCA+AGG 0.593318 2_3:+50740463 Msa0297090:CDS
AGGAGGTGGTGGCGCCGATG+AGG 0.593677 2_3:-50738129 None:intergenic
ATGAGGACTCGAACCGGAGA+CGG 0.597751 2_3:-50738056 None:intergenic
GGATCTTCACACTATTAACA+TGG 0.598228 2_3:+50742123 Msa0297090:CDS
ATATACTTCTACTCCACTGA+AGG 0.598301 2_3:+50742036 Msa0297090:CDS
TCGGTGGAAGGAGAAGGAGG+TGG 0.598699 2_3:-50738143 None:intergenic
CTTCCATTTGGAAATCAGGA+AGG 0.599845 2_3:+50740769 Msa0297090:CDS
AGGGTGGGATTGTCCATCAC+CGG 0.603242 2_3:-50741279 None:intergenic
TCAAGATATGTCGTTTACTG+AGG 0.603814 2_3:+50741583 Msa0297090:CDS
CTGGGTGTAACTTTCGAGAA+CGG 0.605151 2_3:-50740932 None:intergenic
GATTCCCTCCTCTTCAGCAA+AGG 0.605865 2_3:+50741453 Msa0297090:CDS
AATTCTTCTCCGGGTAGAGG+TGG 0.606832 2_3:+50739603 Msa0297090:five_prime_UTR
GCAGAGGTTAAGTTTGCAAG+TGG 0.608888 2_3:+50742241 Msa0297090:CDS
TTGCCCAAGGCACATTCAAG+TGG 0.609307 2_3:+50740879 Msa0297090:CDS
TCACCCTGGTGTTAGAGCTG+GGG 0.611661 2_3:+50739994 Msa0297090:five_prime_UTR
CAAGATATGTCGTTTACTGA+GGG 0.614497 2_3:+50741584 Msa0297090:CDS
TTCCAGCAGAAGGGAATCTG+AGG 0.616111 2_3:-50740155 None:intergenic
AGAATTGGGAACTTTGCCCA+AGG 0.616552 2_3:+50740866 Msa0297090:CDS
ACCTTGCGACCTAGCAAATG+GGG 0.617199 2_3:-50739508 None:intergenic
TTAACAGGAAACGATGGCCA+CGG 0.617888 2_3:-50741769 None:intergenic
GTTATCGTATATATTCAGGA+GGG 0.620960 2_3:+50739420 Msa0297090:five_prime_UTR
CAACGAGTAATGGTTTATCG+AGG 0.622291 2_3:-50738262 None:intergenic
AAGTTACCACCACCTCTACC+CGG 0.622782 2_3:-50739612 None:intergenic
CCTGCAAGTCGATCTGAAGG+TGG 0.623401 2_3:+50739884 Msa0297090:five_prime_UTR
CACCACCGCTCCATCCTCAT+CGG 0.623893 2_3:+50738115 Msa0297090:five_prime_UTR
AATCGATGACTCGGTTGAGG+AGG 0.624468 2_3:-50738217 None:intergenic
GGTTCTGAAGTTACTCACCC+TGG 0.625647 2_3:+50739980 Msa0297090:five_prime_UTR
GTGGAAGTGGAGGAAGACGG+TGG 0.629790 2_3:-50738086 None:intergenic
CCTTTCTCTGAACCTAATGT+GGG 0.630095 2_3:-50741482 None:intergenic
TCATGCTTTAAAGAAGAATG+TGG 0.630380 2_3:-50741713 None:intergenic
TATACTTAGATGATGGTACA+AGG 0.633938 2_3:+50741684 Msa0297090:CDS
ACTTTCGTGACCGTGATAAG+GGG 0.634854 2_3:+50738330 Msa0297090:five_prime_UTR
CAGTGCTGCAGAAGTTGAGG+AGG 0.635169 2_3:-50740017 None:intergenic
GGAACAAAATCCCCTTATCA+CGG 0.635759 2_3:-50738340 None:intergenic
CTTCACACTATTAACATGGG+TGG 0.638254 2_3:+50742127 Msa0297090:CDS
TGTTATCGTATATATTCAGG+AGG 0.638626 2_3:+50739419 Msa0297090:five_prime_UTR
GTTACCAGAAGCGAAGACGT+TGG 0.638969 2_3:-50738240 None:intergenic
AGATACTATGAATCGTCCAA+AGG 0.640244 2_3:+50741095 Msa0297090:CDS
TGTGATGTAGGATAACAAGC+AGG 0.640744 2_3:-50740648 None:intergenic
TAGAGTTCTCTGTGCAAAAG+GGG 0.641082 2_3:+50740416 Msa0297090:CDS
GTAGTAGATTCTGTTAATGG+AGG 0.643662 2_3:+50738019 None:intergenic
ACGTTGTCGGTGGAAGGAGA+AGG 0.644315 2_3:-50738149 None:intergenic
TCCAAAGGCTTACTTCAGAG+TGG 0.644844 2_3:+50741110 Msa0297090:CDS
TTGTCGGTGGAAGGAGAAGG+AGG 0.649154 2_3:-50738146 None:intergenic
ACCAACACCAGAGCCACTGT+TGG 0.649610 2_3:-50740277 None:intergenic
TTATCGTATATATTCAGGAG+GGG 0.650335 2_3:+50739421 Msa0297090:five_prime_UTR
GAATAAGAAAGATACAGCAG+AGG 0.656811 2_3:+50742225 Msa0297090:CDS
TGGCGCCGATGAGGATGGAG+CGG 0.657499 2_3:-50738120 None:intergenic
AATGGGGAGGAATCTTCGGA+TGG 0.658592 2_3:+50739767 Msa0297090:five_prime_UTR
ATCGAATTCTAGTACAAATG+GGG 0.659738 2_3:+50739751 Msa0297090:five_prime_UTR
CTGCATTTAACAGGAAACGA+TGG 0.660205 2_3:-50741775 None:intergenic
TCTCATGAAAGATTCTGGAG+GGG 0.661339 2_3:+50742102 Msa0297090:CDS
AGACGTTGGAATCGATGACT+CGG 0.666837 2_3:-50738226 None:intergenic
GAATTCTAGTACAAATGGGG+AGG 0.667133 2_3:+50739754 Msa0297090:five_prime_UTR
GACATCTTCAACAAGTCCTG+TGG 0.668121 2_3:-50740116 None:intergenic
TGAGGTTGTTGCTGGATCAG+CGG 0.672268 2_3:+50741418 Msa0297090:CDS
GATCTTCACACTATTAACAT+GGG 0.672883 2_3:+50742124 Msa0297090:CDS
AGAGTTCTCTGTGCAAAAGG+GGG 0.674896 2_3:+50740417 Msa0297090:CDS
AATCTCATGAAAGATTCTGG+AGG 0.675237 2_3:+50742100 Msa0297090:CDS
TGGTCAAATAGCAAGCAAAG+AGG 0.677180 2_3:+50740183 Msa0297090:five_prime_UTR
CCATTTGCTAGGTCGCAAGG+TGG 0.677472 2_3:+50739510 Msa0297090:five_prime_UTR
AACAGGAAACGATGGCCACG+GGG 0.678874 2_3:-50741767 None:intergenic
GTACCTCAAATTGCACGACA+GGG 0.681043 2_3:-50743224 None:intergenic
GCAGTATCTTGGTTACAGTG+TGG 0.688159 2_3:+50740543 Msa0297090:CDS
GGGATAGTAAATACCAACAG+TGG 0.689239 2_3:+50740264 Msa0297090:five_prime_UTR
TTCCTGGAACGCCTGCAGTG+AGG 0.701334 2_3:-50742205 None:intergenic
AGGCCCCAGCTCTAACACCA+GGG 0.716392 2_3:-50739997 None:intergenic
ACAGGAAACGATGGCCACGG+GGG 0.750886 2_3:-50741766 None:intergenic
AAACAAAGTTCTGTAATTGG+GGG 0.763352 2_3:+50741221 Msa0297090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACATAATTAGATTGAATT+AGG + chr2_3:50738580-50738599 Msa0297090:intron 15.0%
!! TATTATTAGAGTTATAAATC+AGG + chr2_3:50742351-50742370 Msa0297090:intron 15.0%
!! ATTATTAGAGTTATAAATCA+GGG + chr2_3:50742352-50742371 Msa0297090:intron 15.0%
!!! AAAATATTTTGTTATCAACA+TGG - chr2_3:50742671-50742690 None:intergenic 15.0%
!!! TTTTTTAATTGATAACTTGA+TGG + chr2_3:50742844-50742863 Msa0297090:intron 15.0%
!!! TGAAGATTATCTTTACTTTT+TGG + chr2_3:50738516-50738535 Msa0297090:intron 20.0%
!! TTAGATTGAATTAGGAAATT+TGG + chr2_3:50738588-50738607 Msa0297090:intron 20.0%
!! TTGTATTAAGAAAATCAGAT+TGG + chr2_3:50738991-50739010 Msa0297090:intron 20.0%
!! TAATATCTAAAGATGTTCTA+AGG - chr2_3:50741328-50741347 None:intergenic 20.0%
!!! GGTTTTCTCATTTTAAAAAT+GGG - chr2_3:50741392-50741411 None:intergenic 20.0%
!!! AGGTTTTCTCATTTTAAAAA+TGG - chr2_3:50741393-50741412 None:intergenic 20.0%
!! TAATTTAATGCTTATTTGAG+CGG - chr2_3:50742305-50742324 None:intergenic 20.0%
!! TTATTAGAGTTATAAATCAG+GGG + chr2_3:50742353-50742372 Msa0297090:intron 20.0%
!! AGATGAAAGAAAAGTTTATT+AGG - chr2_3:50742505-50742524 None:intergenic 20.0%
!! CAGAAAGTAAAATAAGTTAA+AGG - chr2_3:50742528-50742547 None:intergenic 20.0%
!! GTAAGTAATCATTTATTGAT+GGG + chr2_3:50742593-50742612 Msa0297090:intron 20.0%
!! TAAGTAATCATTTATTGATG+GGG + chr2_3:50742594-50742613 Msa0297090:intron 20.0%
!!! ATTCAGAAACATTTTCTTAA+TGG - chr2_3:50742802-50742821 None:intergenic 20.0%
!!! GGTTTAACATTTTGATTTTA+CGG - chr2_3:50742901-50742920 None:intergenic 20.0%
!! GAACAAAAGTTAATGATAAA+TGG - chr2_3:50742996-50743015 None:intergenic 20.0%
! TGTGCTAAGTTTATAGAATT+AGG + chr2_3:50738545-50738564 Msa0297090:intron 25.0%
! GTGCTAAGTTTATAGAATTA+GGG + chr2_3:50738546-50738565 Msa0297090:intron 25.0%
! TAAGTTTATAGAATTAGGGT+AGG + chr2_3:50738550-50738569 Msa0297090:intron 25.0%
! GAATTAGGAAATTTGGATTT+AGG + chr2_3:50738595-50738614 Msa0297090:intron 25.0%
! AACTGTAATGTTAGTGATTT+AGG + chr2_3:50738618-50738637 Msa0297090:intron 25.0%
! TAAGAAAATCAGATTGGATT+AGG + chr2_3:50738997-50739016 Msa0297090:intron 25.0%
!!! GTTTGACTTTATTTTATCGT+TGG + chr2_3:50739205-50739224 Msa0297090:intron 25.0%
! ATTAAACTGTTTATCCAAAC+AGG + chr2_3:50739259-50739278 Msa0297090:intron 25.0%
! TTAAACTGTTTATCCAAACA+GGG + chr2_3:50739260-50739279 Msa0297090:intron 25.0%
! TCATGTTATCGTATATATTC+AGG + chr2_3:50739416-50739435 Msa0297090:five_prime_UTR 25.0%
! TTATCGAATTCTAGTACAAA+TGG + chr2_3:50739749-50739768 Msa0297090:five_prime_UTR 25.0%
! TATCGAATTCTAGTACAAAT+GGG + chr2_3:50739750-50739769 Msa0297090:five_prime_UTR 25.0%
! AAGAAATGTAGAACATTATC+TGG + chr2_3:50739959-50739978 Msa0297090:five_prime_UTR 25.0%
!! ATTCACCTTTTTGAATTGAA+AGG - chr2_3:50740084-50740103 None:intergenic 25.0%
! TCTGCAATATATTCAACATT+GGG - chr2_3:50741248-50741267 None:intergenic 25.0%
! ATCTGCAATATATTCAACAT+TGG - chr2_3:50741249-50741268 None:intergenic 25.0%
!!! GACAACAAAAGTATAAGTTT+TGG + chr2_3:50741356-50741375 Msa0297090:CDS 25.0%
!!! AAAAGTATAAGTTTTGGTAG+AGG + chr2_3:50741362-50741381 Msa0297090:CDS 25.0%
! ATCTCATTTATCTTCTTCTA+TGG + chr2_3:50741841-50741860 Msa0297090:CDS 25.0%
! ATAAATAAGGAAAGAGATGT+GGG + chr2_3:50741962-50741981 Msa0297090:CDS 25.0%
! TATGACATCTGTGAATATAT+TGG + chr2_3:50742066-50742085 Msa0297090:CDS 25.0%
!! ACAGCTTAAAAGGATTTTTA+TGG + chr2_3:50742270-50742289 Msa0297090:CDS 25.0%
! TATTAGAGTTATAAATCAGG+GGG + chr2_3:50742354-50742373 Msa0297090:intron 25.0%
! GGTAAGTAATCATTTATTGA+TGG + chr2_3:50742592-50742611 Msa0297090:intron 25.0%
!! ATCAATTTTGTTAGAGAAAC+TGG - chr2_3:50742622-50742641 None:intergenic 25.0%
!!! TTAACATTTTGATTTTACGG+TGG - chr2_3:50742898-50742917 None:intergenic 25.0%
! TAAACCACCTATTACTTTAT+AGG + chr2_3:50742915-50742934 Msa0297090:intron 25.0%
! AAACCACCTATTACTTTATA+GGG + chr2_3:50742916-50742935 Msa0297090:intron 25.0%
! TACAGCAATATCTATACATT+AGG - chr2_3:50743168-50743187 None:intergenic 25.0%
! TAATGTATAGATATTGCTGT+AGG + chr2_3:50743167-50743186 Msa0297090:intron 25.0%
AATAAGCTGTTTATCCAAAC+AGG - chr2_3:50738645-50738664 None:intergenic 30.0%
!! TAAGCTATTTCTATAGCAGA+AGG + chr2_3:50738693-50738712 Msa0297090:intron 30.0%
GATTAGGAAGTTAGGATTTA+GGG + chr2_3:50739013-50739032 Msa0297090:intron 30.0%
ATTAGGAAGTTAGGATTTAG+GGG + chr2_3:50739014-50739033 Msa0297090:intron 30.0%
! TGTTTTCAACTCATTTCCAT+AGG + chr2_3:50739136-50739155 Msa0297090:intron 30.0%
TATGCTAATGAAATTGTGTG+TGG + chr2_3:50739353-50739372 Msa0297090:intron 30.0%
! AATTGACTAGTTAGAAATGC+AGG + chr2_3:50739389-50739408 Msa0297090:intron 30.0%
TGTTATCGTATATATTCAGG+AGG + chr2_3:50739419-50739438 Msa0297090:five_prime_UTR 30.0%
GTTATCGTATATATTCAGGA+GGG + chr2_3:50739420-50739439 Msa0297090:five_prime_UTR 30.0%
TTATCGTATATATTCAGGAG+GGG + chr2_3:50739421-50739440 Msa0297090:five_prime_UTR 30.0%
AGAAGAATTATTTCGTGATG+AGG - chr2_3:50739592-50739611 None:intergenic 30.0%
ATCACGAAATAATTCTTCTC+CGG + chr2_3:50739593-50739612 Msa0297090:five_prime_UTR 30.0%
! TCTTATACTTCTTTGTTTCC+TGG + chr2_3:50739678-50739697 Msa0297090:five_prime_UTR 30.0%
ATCGAATTCTAGTACAAATG+GGG + chr2_3:50739751-50739770 Msa0297090:five_prime_UTR 30.0%
TTGTTGAAGATGTCTTGAAT+GGG + chr2_3:50740125-50740144 Msa0297090:five_prime_UTR 30.0%
CTGTTAAAGAGTTCATTTAC+AGG + chr2_3:50740215-50740234 Msa0297090:five_prime_UTR 30.0%
!!! ATCTTCCAAGTTTTGAAACT+TGG + chr2_3:50740367-50740386 Msa0297090:CDS 30.0%
GTTAACCAAGTTTCAAAACT+TGG - chr2_3:50740375-50740394 None:intergenic 30.0%
ACATGAAGTTCACTTAGATA+AGG + chr2_3:50740671-50740690 Msa0297090:CDS 30.0%
! GCAACTTTTTGCAAAAACAT+TGG + chr2_3:50740734-50740753 Msa0297090:CDS 30.0%
! TTTTGCAAAAACATTGGAAG+AGG + chr2_3:50740740-50740759 Msa0297090:CDS 30.0%
ATTCAAAATCAAACGGATCT+GGG - chr2_3:50740953-50740972 None:intergenic 30.0%
! TCAGCTGATTCAAAATCAAA+CGG - chr2_3:50740960-50740979 None:intergenic 30.0%
! CTGAGAAATATCTTCTGAAA+TGG + chr2_3:50741144-50741163 Msa0297090:CDS 30.0%
TATACCTAGAGAAACAGAAA+AGG + chr2_3:50741171-50741190 Msa0297090:CDS 30.0%
GGAAACAAAGTTCTGTAATT+GGG + chr2_3:50741219-50741238 Msa0297090:CDS 30.0%
GAAACAAAGTTCTGTAATTG+GGG + chr2_3:50741220-50741239 Msa0297090:CDS 30.0%
AAACAAAGTTCTGTAATTGG+GGG + chr2_3:50741221-50741240 Msa0297090:CDS 30.0%
! AATGAGAAAACCTTTTTCTG+AGG + chr2_3:50741400-50741419 Msa0297090:CDS 30.0%
TTATTTCCATTACCATGAAG+AGG - chr2_3:50741611-50741630 None:intergenic 30.0%
!! CTTCATGGTAATGGAAATAA+TGG + chr2_3:50741611-50741630 Msa0297090:CDS 30.0%
TTACCTGTATACTTAGATGA+TGG + chr2_3:50741677-50741696 Msa0297090:CDS 30.0%
! TATACTTAGATGATGGTACA+AGG + chr2_3:50741684-50741703 Msa0297090:CDS 30.0%
!! TCATGCTTTAAAGAAGAATG+TGG - chr2_3:50741716-50741735 None:intergenic 30.0%
TCTTTCTGCATCCATAAATA+AGG + chr2_3:50741949-50741968 Msa0297090:CDS 30.0%
! CACATCTCTTTCCTTATTTA+TGG - chr2_3:50741963-50741982 None:intergenic 30.0%
CATAAATAAGGAAAGAGATG+TGG + chr2_3:50741961-50741980 Msa0297090:CDS 30.0%
!! TCAAATGAAAGCATTCCTAA+TGG + chr2_3:50741989-50742008 Msa0297090:CDS 30.0%
GATCTTCACACTATTAACAT+GGG + chr2_3:50742124-50742143 Msa0297090:CDS 30.0%
TCATGTAGATAGGCAAATTT+CGG - chr2_3:50742180-50742199 None:intergenic 30.0%
ATTAGAGTTATAAATCAGGG+GGG + chr2_3:50742355-50742374 Msa0297090:intron 30.0%
TAAGATAAACCAAAATTCGC+TGG + chr2_3:50742558-50742577 Msa0297090:intron 30.0%
! GGTTTTCTTCGTTGAAATAA+AGG + chr2_3:50742710-50742729 Msa0297090:intron 30.0%
ACAACTCCCTATAAAGTAAT+AGG - chr2_3:50742925-50742944 None:intergenic 30.0%
! TATCATTAACTTTTGTTCGC+TGG + chr2_3:50742998-50743017 Msa0297090:intron 30.0%
! ATCATTAACTTTTGTTCGCT+GGG + chr2_3:50742999-50743018 Msa0297090:intron 30.0%
! AAAACTGTAGTTCATTTTGC+TGG + chr2_3:50743040-50743059 Msa0297090:intron 30.0%
TCTTCATCTTCAACGAGTAA+TGG - chr2_3:50738275-50738294 None:intergenic 35.0%
AAGATGAAGAAGCTAAGGAA+TGG + chr2_3:50738285-50738304 Msa0297090:five_prime_UTR 35.0%
TCAACAACAGAATCAAATCC+CGG - chr2_3:50738413-50738432 None:intergenic 35.0%
! TGTGAGTTTGGTGATTTACA+GGG + chr2_3:50738437-50738456 Msa0297090:five_prime_UTR 35.0%
! TTAGTGATTTAGGACCTGTT+TGG + chr2_3:50738628-50738647 Msa0297090:intron 35.0%
! TCAGATTGGATTAGGAAGTT+AGG + chr2_3:50739005-50739024 Msa0297090:intron 35.0%
GGATTAGGAAGTTAGGATTT+AGG + chr2_3:50739012-50739031 Msa0297090:intron 35.0%
! GGTTTGATACTAGGGTTTTA+AGG + chr2_3:50739448-50739467 Msa0297090:five_prime_UTR 35.0%
TCACGAAATAATTCTTCTCC+GGG + chr2_3:50739594-50739613 Msa0297090:five_prime_UTR 35.0%
! TGTTTTCACTTGATGCATCA+AGG + chr2_3:50740038-50740057 Msa0297090:five_prime_UTR 35.0%
! GTTTTCACTTGATGCATCAA+GGG + chr2_3:50740039-50740058 Msa0297090:five_prime_UTR 35.0%
! CACCTTTTTGAATTGAAAGG+CGG - chr2_3:50740081-50740100 None:intergenic 35.0%
CTTGTTGAAGATGTCTTGAA+TGG + chr2_3:50740124-50740143 Msa0297090:five_prime_UTR 35.0%
! ACAGGCAATCTGATATTTTG+AGG + chr2_3:50740233-50740252 Msa0297090:five_prime_UTR 35.0%
!! CAGGCAATCTGATATTTTGA+GGG + chr2_3:50740234-50740253 Msa0297090:five_prime_UTR 35.0%
!! ATCTGATATTTTGAGGGAAG+AGG + chr2_3:50740240-50740259 Msa0297090:five_prime_UTR 35.0%
!! TCTGATATTTTGAGGGAAGA+GGG + chr2_3:50740241-50740260 Msa0297090:five_prime_UTR 35.0%
GTTTCAAAACTTGGAAGATC+AGG - chr2_3:50740366-50740385 None:intergenic 35.0%
ATAAAAGAAAACCTCGTCCA+AGG + chr2_3:50740463-50740482 Msa0297090:CDS 35.0%
! ACACTAAGTTTTCGACTTTG+TGG + chr2_3:50740577-50740596 Msa0297090:CDS 35.0%
AAATATATCTCCTTTGCAGC+TGG - chr2_3:50740618-50740637 None:intergenic 35.0%
TGAACTTCATGTTGTGATGT+AGG - chr2_3:50740663-50740682 None:intergenic 35.0%
! ATGTGATGCTGTTAGTTTGA+CGG + chr2_3:50740797-50740816 Msa0297090:CDS 35.0%
TGAGGACAGTAATTCAGAAT+TGG + chr2_3:50740851-50740870 Msa0297090:CDS 35.0%
GAGGACAGTAATTCAGAATT+GGG + chr2_3:50740852-50740871 Msa0297090:CDS 35.0%
GATTCAAAATCAAACGGATC+TGG - chr2_3:50740954-50740973 None:intergenic 35.0%
AGATACTATGAATCGTCCAA+AGG + chr2_3:50741095-50741114 Msa0297090:CDS 35.0%
!! TTAGCCTTTTCTGTTTCTCT+AGG - chr2_3:50741178-50741197 None:intergenic 35.0%
GAGAAACAGAAAAGGCTAAA+TGG + chr2_3:50741179-50741198 Msa0297090:CDS 35.0%
! AATGGTTCAACAGAGAGTAT+AGG + chr2_3:50741197-50741216 Msa0297090:CDS 35.0%
! ATGGTTCAACAGAGAGTATA+GGG + chr2_3:50741198-50741217 Msa0297090:CDS 35.0%
GGGAAACAAAGTTCTGTAAT+TGG + chr2_3:50741218-50741237 Msa0297090:CDS 35.0%
AAGCAATCAGAATGCAGAAA+GGG + chr2_3:50741523-50741542 Msa0297090:CDS 35.0%
! TCAAGATATGTCGTTTACTG+AGG + chr2_3:50741583-50741602 Msa0297090:CDS 35.0%
! CAAGATATGTCGTTTACTGA+GGG + chr2_3:50741584-50741603 Msa0297090:CDS 35.0%
TGCTACCTATCCTCAAAAAA+GGG - chr2_3:50741652-50741671 None:intergenic 35.0%
TTGCTACCTATCCTCAAAAA+AGG - chr2_3:50741653-50741672 None:intergenic 35.0%
GTACCATCATCTAAGTATAC+AGG - chr2_3:50741683-50741702 None:intergenic 35.0%
!! GCTTTAAAGAAGAATGTGGT+TGG - chr2_3:50741712-50741731 None:intergenic 35.0%
AAGCATGAGATAGTGTATGT+TGG + chr2_3:50741728-50741747 Msa0297090:CDS 35.0%
TGAGATGATCTGCATTTAAC+AGG - chr2_3:50741787-50741806 None:intergenic 35.0%
ATATACTTCTACTCCACTGA+AGG + chr2_3:50742036-50742055 Msa0297090:CDS 35.0%
GTCATATTTGTTTCCTTCAG+TGG - chr2_3:50742052-50742071 None:intergenic 35.0%
AGAATCTTTCATGAGATTGG+GGG - chr2_3:50742098-50742117 None:intergenic 35.0%
CAGAATCTTTCATGAGATTG+GGG - chr2_3:50742099-50742118 None:intergenic 35.0%
CCAGAATCTTTCATGAGATT+GGG - chr2_3:50742100-50742119 None:intergenic 35.0%
TCCAGAATCTTTCATGAGAT+TGG - chr2_3:50742101-50742120 None:intergenic 35.0%
AATCTCATGAAAGATTCTGG+AGG + chr2_3:50742100-50742119 Msa0297090:CDS 35.0%
ATCTCATGAAAGATTCTGGA+GGG + chr2_3:50742101-50742120 Msa0297090:CDS 35.0%
GGATCTTCACACTATTAACA+TGG + chr2_3:50742123-50742142 Msa0297090:CDS 35.0%
TGCTGTATCTTTCTTATTCC+TGG - chr2_3:50742224-50742243 None:intergenic 35.0%
GAATAAGAAAGATACAGCAG+AGG + chr2_3:50742225-50742244 Msa0297090:CDS 35.0%
TTCTAACTTGATGTGAAGAC+TGG + chr2_3:50742689-50742708 Msa0297090:intron 35.0%
ACTCCCTATAAAGTAATAGG+TGG - chr2_3:50742922-50742941 None:intergenic 35.0%
TCATGTGACATCCAATACAT+TGG - chr2_3:50743066-50743085 None:intergenic 35.0%
! TTCTTGTAGTGTGCAGTTTT+TGG + chr2_3:50743254-50743273 Msa0297090:CDS 35.0%
AGTTGAATCGTCGTAGTGTT+GGG - chr2_3:50738195-50738214 None:intergenic 40.0%
CAACGAGTAATGGTTTATCG+AGG - chr2_3:50738265-50738284 None:intergenic 40.0%
CGTTGAAGATGAAGAAGCTA+AGG + chr2_3:50738280-50738299 Msa0297090:five_prime_UTR 40.0%
TTACTTTCGTGACCGTGATA+AGG + chr2_3:50738328-50738347 Msa0297090:five_prime_UTR 40.0%
TACTTTCGTGACCGTGATAA+GGG + chr2_3:50738329-50738348 Msa0297090:five_prime_UTR 40.0%
GGAACAAAATCCCCTTATCA+CGG - chr2_3:50738343-50738362 None:intergenic 40.0%
! GTTGTTGAAGAGTGTGAGTT+TGG + chr2_3:50738425-50738444 Msa0297090:five_prime_UTR 40.0%
! GTGTGAGTTTGGTGATTTAC+AGG + chr2_3:50738436-50738455 Msa0297090:five_prime_UTR 40.0%
!! GCTGATTTTGTAAGCTATCC+TGG + chr2_3:50738750-50738769 Msa0297090:intron 40.0%
! GTTTATCCAAACAGGGCATT+AGG + chr2_3:50739267-50739286 Msa0297090:intron 40.0%
AGTCAGCTTCATGTTATAGC+AGG + chr2_3:50739310-50739329 Msa0297090:intron 40.0%
GTCAGCTTCATGTTATAGCA+GGG + chr2_3:50739311-50739330 Msa0297090:intron 40.0%
TATATATTCAGGAGGGGTCA+AGG + chr2_3:50739427-50739446 Msa0297090:five_prime_UTR 40.0%
ACAAGCAGCAAAACATGCTA+TGG + chr2_3:50739485-50739504 Msa0297090:five_prime_UTR 40.0%
AATAATTCTTCTCCGGGTAG+AGG + chr2_3:50739600-50739619 Msa0297090:five_prime_UTR 40.0%
GTGTCTCTTATGTCAGGTTT+AGG + chr2_3:50739654-50739673 Msa0297090:five_prime_UTR 40.0%
ACAAACACAAACAGCATCAC+AGG - chr2_3:50739714-50739733 None:intergenic 40.0%
! TGTGATGCTGTTTGTGTTTG+TGG + chr2_3:50739713-50739732 Msa0297090:five_prime_UTR 40.0%
GAATTCTAGTACAAATGGGG+AGG + chr2_3:50739754-50739773 Msa0297090:five_prime_UTR 40.0%
TACAAATGGGGAGGAATCTT+CGG + chr2_3:50739763-50739782 Msa0297090:five_prime_UTR 40.0%
!! GTCTTCTAGTTTGAGTAGTG+TGG + chr2_3:50739805-50739824 Msa0297090:five_prime_UTR 40.0%
ACAAGTTTGCCTGCTACTAA+AGG + chr2_3:50739833-50739852 Msa0297090:five_prime_UTR 40.0%
GACCGCCTTTCAATTCAAAA+AGG + chr2_3:50740076-50740095 Msa0297090:five_prime_UTR 40.0%
TGGTCAAATAGCAAGCAAAG+AGG + chr2_3:50740183-50740202 Msa0297090:five_prime_UTR 40.0%
!! CTGATATTTTGAGGGAAGAG+GGG + chr2_3:50740242-50740261 Msa0297090:five_prime_UTR 40.0%
!! TGATATTTTGAGGGAAGAGG+GGG + chr2_3:50740243-50740262 Msa0297090:five_prime_UTR 40.0%
GGGATAGTAAATACCAACAG+TGG + chr2_3:50740264-50740283 Msa0297090:five_prime_UTR 40.0%
AGTAGAGTTCTCTGTGCAAA+AGG + chr2_3:50740414-50740433 Msa0297090:CDS 40.0%
GTAGAGTTCTCTGTGCAAAA+GGG + chr2_3:50740415-50740434 Msa0297090:CDS 40.0%
TAGAGTTCTCTGTGCAAAAG+GGG + chr2_3:50740416-50740435 Msa0297090:CDS 40.0%
TTCAAAGATTCTTCCACTGC+AGG - chr2_3:50740501-50740520 None:intergenic 40.0%
CAAGATACTGCAACGTCTAA+TGG - chr2_3:50740534-50740553 None:intergenic 40.0%
CATTAGACGTTGCAGTATCT+TGG + chr2_3:50740532-50740551 Msa0297090:CDS 40.0%
TGTGATGTAGGATAACAAGC+AGG - chr2_3:50740651-50740670 None:intergenic 40.0%
ATTGCATGCATTTCGCTCAA+TGG + chr2_3:50740695-50740714 Msa0297090:CDS 40.0%
GCATTTCGCTCAATGGTAAA+AGG + chr2_3:50740702-50740721 Msa0297090:CDS 40.0%
TTTGCAAAAAGTTGCACTGC+AGG - chr2_3:50740729-50740748 None:intergenic 40.0%
AAGAGGATTGCTCTTCCATT+TGG + chr2_3:50740757-50740776 Msa0297090:CDS 40.0%
TGCTCTTCCATTTGGAAATC+AGG + chr2_3:50740765-50740784 Msa0297090:CDS 40.0%
CTTCCATTTGGAAATCAGGA+AGG + chr2_3:50740769-50740788 Msa0297090:CDS 40.0%
TTGCCTTCCTGATTTCCAAA+TGG - chr2_3:50740775-50740794 None:intergenic 40.0%
! TGTGATGCTGTTAGTTTGAC+GGG + chr2_3:50740798-50740817 Msa0297090:CDS 40.0%
GAAAACCATGCATGCATCAA+AGG + chr2_3:50740820-50740839 Msa0297090:CDS 40.0%
! GATTTTGAATCAGCTGATGC+TGG + chr2_3:50740963-50740982 Msa0297090:CDS 40.0%
ATTGCAGATGCAAAGAGAAC+CGG + chr2_3:50741260-50741279 Msa0297090:CDS 40.0%
ATTTCCTTTGCTGAAGAGGA+GGG - chr2_3:50741460-50741479 None:intergenic 40.0%
AATTTCCTTTGCTGAAGAGG+AGG - chr2_3:50741461-50741480 None:intergenic 40.0%
CAAAGGAAATTGCCCACATT+AGG + chr2_3:50741470-50741489 Msa0297090:CDS 40.0%
CCTTTCTCTGAACCTAATGT+GGG - chr2_3:50741485-50741504 None:intergenic 40.0%
ACCTTTCTCTGAACCTAATG+TGG - chr2_3:50741486-50741505 None:intergenic 40.0%
CTTTCTGCATTCTGATTGCT+TGG - chr2_3:50741524-50741543 None:intergenic 40.0%
CAAGCAATCAGAATGCAGAA+AGG + chr2_3:50741522-50741541 Msa0297090:CDS 40.0%
GGAAATAATGGTTGCAGAGA+CGG + chr2_3:50741623-50741642 Msa0297090:CDS 40.0%
CTGCATTTAACAGGAAACGA+TGG - chr2_3:50741778-50741797 None:intergenic 40.0%
GATGCCTGATTTCTTTCAAC+AGG - chr2_3:50741869-50741888 None:intergenic 40.0%
!! ATTTGAGCGTCGATGAACTT+TGG - chr2_3:50741924-50741943 None:intergenic 40.0%
TCAGCATTCAGATGACCATT+AGG - chr2_3:50742007-50742026 None:intergenic 40.0%
CCCAATCTCATGAAAGATTC+TGG + chr2_3:50742097-50742116 Msa0297090:CDS 40.0%
! TCTCATGAAAGATTCTGGAG+GGG + chr2_3:50742102-50742121 Msa0297090:CDS 40.0%
CTTCACACTATTAACATGGG+TGG + chr2_3:50742127-50742146 Msa0297090:CDS 40.0%
AGGCAAATTTCGGTTCAGTA+TGG - chr2_3:50742170-50742189 None:intergenic 40.0%
TGAGGACAGATCATGTAGAT+AGG - chr2_3:50742190-50742209 None:intergenic 40.0%
GTGGTATCTCACAGCTTAAA+AGG + chr2_3:50742260-50742279 Msa0297090:CDS 40.0%
! GAAACACATCCAGCGAATTT+TGG - chr2_3:50742570-50742589 None:intergenic 40.0%
AATTCGCTGGATGTGTTTCA+AGG + chr2_3:50742571-50742590 Msa0297090:intron 40.0%
! GATTTTACGGTGGAAACACT+TGG - chr2_3:50742888-50742907 None:intergenic 40.0%
! AGGGAGTTGTGTTTTCCATT+TGG + chr2_3:50742935-50742954 Msa0297090:intron 40.0%
! CATTTTGCTGGCCAATGTAT+TGG + chr2_3:50743052-50743071 Msa0297090:intron 40.0%
GCTAGTATTACAGGAAATGC+TGG - chr2_3:50743198-50743217 None:intergenic 40.0%
ACTGCACACTACAAGAAGAA+AGG - chr2_3:50743251-50743270 None:intergenic 40.0%
ACCGACAACGTCGTAGTAAT+CGG + chr2_3:50738161-50738180 Msa0297090:five_prime_UTR 45.0%
ACCGATTACTACGACGTTGT+CGG - chr2_3:50738165-50738184 None:intergenic 45.0%
GAGTTGAATCGTCGTAGTGT+TGG - chr2_3:50738196-50738215 None:intergenic 45.0%
AGACGTTGGAATCGATGACT+CGG - chr2_3:50738229-50738248 None:intergenic 45.0%
ACTTTCGTGACCGTGATAAG+GGG + chr2_3:50738330-50738349 Msa0297090:five_prime_UTR 45.0%
! AACGAGTTGAAGCGAAGTGA+AGG - chr2_3:50738364-50738383 None:intergenic 45.0%
TGTTCATGATTCGCCTTCAC+CGG + chr2_3:50738391-50738410 Msa0297090:five_prime_UTR 45.0%
ACAGAATCAAATCCCGGTGA+AGG - chr2_3:50738407-50738426 None:intergenic 45.0%
AAGCTATCCTGGAGAGCTTA+TGG + chr2_3:50738761-50738780 Msa0297090:intron 45.0%
CGTATTTCCATAAGCTCTCC+AGG - chr2_3:50738771-50738790 None:intergenic 45.0%
AAGCACTTGCGACACTGTTT+GGG - chr2_3:50738836-50738855 None:intergenic 45.0%
TAAGCACTTGCGACACTGTT+TGG - chr2_3:50738837-50738856 None:intergenic 45.0%
CAGCACATGCAACACTGTTT+AGG - chr2_3:50738921-50738940 None:intergenic 45.0%
AGGAAGTTAGGATTTAGGGG+CGG + chr2_3:50739017-50739036 Msa0297090:intron 45.0%
CTCATTTCCATAGGCTCTTC+AGG + chr2_3:50739145-50739164 Msa0297090:intron 45.0%
AAGCTATCCTGAAGAGCCTA+TGG - chr2_3:50739155-50739174 None:intergenic 45.0%
ACAGTTCCTAATGCCCTGTT+TGG - chr2_3:50739276-50739295 None:intergenic 45.0%
AGGGGTCAAGGTTTGATACT+AGG + chr2_3:50739439-50739458 Msa0297090:five_prime_UTR 45.0%
GGGGTCAAGGTTTGATACTA+GGG + chr2_3:50739440-50739459 Msa0297090:five_prime_UTR 45.0%
GCAGAAGAATGCACTCTAGA+CGG - chr2_3:50739549-50739568 None:intergenic 45.0%
TCTGCTGTGTCTCTTATGTC+AGG + chr2_3:50739648-50739667 Msa0297090:five_prime_UTR 45.0%
GTGTTTGTGGATGACTTCTC+TGG + chr2_3:50739726-50739745 Msa0297090:five_prime_UTR 45.0%
TTGCCTGCTACTAAAGGTTC+TGG + chr2_3:50739839-50739858 Msa0297090:five_prime_UTR 45.0%
GAACCAGAACCTTTAGTAGC+AGG - chr2_3:50739845-50739864 None:intergenic 45.0%
!! TTCTGGTTCAGTAGTTGTGC+TGG + chr2_3:50739856-50739875 Msa0297090:five_prime_UTR 45.0%
AAACAGTGCTGCAGAAGTTG+AGG - chr2_3:50740023-50740042 None:intergenic 45.0%
GAATCTCTTGAGTTTGCCAC+AGG + chr2_3:50740100-50740119 Msa0297090:five_prime_UTR 45.0%
GACATCTTCAACAAGTCCTG+TGG - chr2_3:50740119-50740138 None:intergenic 45.0%
ACCATGACTTTCCAGCAGAA+GGG - chr2_3:50740167-50740186 None:intergenic 45.0%
!! GATATTTTGAGGGAAGAGGG+GGG + chr2_3:50740244-50740263 Msa0297090:five_prime_UTR 45.0%
GTAAATACCAACAGTGGCTC+TGG + chr2_3:50740270-50740289 Msa0297090:five_prime_UTR 45.0%
! TGTTTTGCCAGAAGCAACTG+AGG - chr2_3:50740334-50740353 None:intergenic 45.0%
AGAGTTCTCTGTGCAAAAGG+GGG + chr2_3:50740417-50740436 Msa0297090:CDS 45.0%
GCAGTATCTTGGTTACAGTG+TGG + chr2_3:50740543-50740562 Msa0297090:CDS 45.0%
TCTTGGTTACAGTGTGGTAG+AGG + chr2_3:50740549-50740568 Msa0297090:CDS 45.0%
CTTGGTTACAGTGTGGTAGA+GGG + chr2_3:50740550-50740569 Msa0297090:CDS 45.0%
TATCTCCTTTGCAGCTGGAA+TGG - chr2_3:50740613-50740632 None:intergenic 45.0%
TCATGCCTTTGATGCATGCA+TGG - chr2_3:50740828-50740847 None:intergenic 45.0%
! GCATCAAAGGCATGATGTTG+AGG + chr2_3:50740833-50740852 Msa0297090:CDS 45.0%
AGAATTGGGAACTTTGCCCA+AGG + chr2_3:50740866-50740885 Msa0297090:CDS 45.0%
TAGCCACTTGAATGTGCCTT+GGG - chr2_3:50740885-50740904 None:intergenic 45.0%
CTGGGTGTAACTTTCGAGAA+CGG - chr2_3:50740935-50740954 None:intergenic 45.0%
!! GTTTCTGGTAGTTTGACTGC+AGG - chr2_3:50741017-50741036 None:intergenic 45.0%
CTACCAGAAACTGAAGTTGC+TGG + chr2_3:50741026-50741045 Msa0297090:CDS 45.0%
GACCTGTTCAATCTTCTTCG+TGG + chr2_3:50741048-50741067 Msa0297090:CDS 45.0%
CTCCACGAAGAAGATTGAAC+AGG - chr2_3:50741053-50741072 None:intergenic 45.0%
TCGTGGAGTTTACTGCGTAT+TGG + chr2_3:50741065-50741084 Msa0297090:CDS 45.0%
TGGAGTTTACTGCGTATTGG+AGG + chr2_3:50741068-50741087 Msa0297090:CDS 45.0%
TCCAAAGGCTTACTTCAGAG+TGG + chr2_3:50741110-50741129 Msa0297090:CDS 45.0%
!! TCCACTCTGAAGTAAGCCTT+TGG - chr2_3:50741114-50741133 None:intergenic 45.0%
CCAGCAACAACCTCAGAAAA+AGG - chr2_3:50741413-50741432 None:intergenic 45.0%
!!! CCTTTTTCTGAGGTTGTTGC+TGG + chr2_3:50741410-50741429 Msa0297090:CDS 45.0%
GGCAATTTCCTTTGCTGAAG+AGG - chr2_3:50741464-50741483 None:intergenic 45.0%
CCCACATTAGGTTCAGAGAA+AGG + chr2_3:50741482-50741501 Msa0297090:CDS 45.0%
TTTACTGAGGGACCTCTTCA+TGG + chr2_3:50741596-50741615 Msa0297090:CDS 45.0%
!!! GGTGACCCTTTTTTGAGGAT+AGG + chr2_3:50741644-50741663 Msa0297090:CDS 45.0%
TTAACAGGAAACGATGGCCA+CGG - chr2_3:50741772-50741791 None:intergenic 45.0%
GCAGATCATCTCACTGAACT+TGG + chr2_3:50741794-50741813 Msa0297090:CDS 45.0%
GGAGCCTGTTGAAAGAAATC+AGG + chr2_3:50741862-50741881 Msa0297090:CDS 45.0%
AAGTAAGCAAGACTGCTTCC+TGG + chr2_3:50741897-50741916 Msa0297090:CDS 45.0%
GCAGAGGTTAAGTTTGCAAG+TGG + chr2_3:50742241-50742260 Msa0297090:CDS 45.0%
!! TTAGTCTTGCAGCTGCCAAA+TGG - chr2_3:50742953-50742972 None:intergenic 45.0%
GGGCATGTTGCTAGTATTAC+AGG - chr2_3:50743207-50743226 None:intergenic 45.0%
GTACCTCAAATTGCACGACA+GGG - chr2_3:50743227-50743246 None:intergenic 45.0%
TGTACCTCAAATTGCACGAC+AGG - chr2_3:50743228-50743247 None:intergenic 45.0%
GATTACTACGACGTTGTCGG+TGG - chr2_3:50738162-50738181 None:intergenic 50.0%
!! AATCGATGACTCGGTTGAGG+AGG - chr2_3:50738220-50738239 None:intergenic 50.0%
!! TGGAATCGATGACTCGGTTG+AGG - chr2_3:50738223-50738242 None:intergenic 50.0%
GATTCCAACGTCTTCGCTTC+TGG + chr2_3:50738236-50738255 Msa0297090:five_prime_UTR 50.0%
GTTACCAGAAGCGAAGACGT+TGG - chr2_3:50738243-50738262 None:intergenic 50.0%
GTTCATGATTCGCCTTCACC+GGG + chr2_3:50738392-50738411 Msa0297090:five_prime_UTR 50.0%
GTTAGGATTTAGGGGCGGTT+TGG + chr2_3:50739022-50739041 Msa0297090:intron 50.0%
ATGCTATGGCCCCATTTGCT+AGG + chr2_3:50739499-50739518 Msa0297090:five_prime_UTR 50.0%
ACCTTGCGACCTAGCAAATG+GGG - chr2_3:50739511-50739530 None:intergenic 50.0%
CACCTTGCGACCTAGCAAAT+GGG - chr2_3:50739512-50739531 None:intergenic 50.0%
AATTCTTCTCCGGGTAGAGG+TGG + chr2_3:50739603-50739622 Msa0297090:five_prime_UTR 50.0%
AAGTTACCACCACCTCTACC+CGG - chr2_3:50739615-50739634 None:intergenic 50.0%
ATCACAGGTATGCACTGTCC+AGG - chr2_3:50739699-50739718 None:intergenic 50.0%
AATGGGGAGGAATCTTCGGA+TGG + chr2_3:50739767-50739786 Msa0297090:five_prime_UTR 50.0%
! GTCGATCTGAAGGTGGACTT+AGG + chr2_3:50739891-50739910 Msa0297090:five_prime_UTR 50.0%
!! GGTTCTGAAGTTACTCACCC+TGG + chr2_3:50739980-50739999 Msa0297090:five_prime_UTR 50.0%
AACCTCAGATTCCCTTCTGC+TGG + chr2_3:50740153-50740172 Msa0297090:five_prime_UTR 50.0%
TTCCAGCAGAAGGGAATCTG+AGG - chr2_3:50740158-50740177 None:intergenic 50.0%
TCCCTTCTGCTGGAAAGTCA+TGG + chr2_3:50740163-50740182 Msa0297090:five_prime_UTR 50.0%
GACCATGACTTTCCAGCAGA+AGG - chr2_3:50740168-50740187 None:intergenic 50.0%
!! TGGTGTTGGTATGGTTGCTG+TGG + chr2_3:50740290-50740309 Msa0297090:exon 50.0%
CTGTGCAAAAGGGGGTTGTT+TGG + chr2_3:50740425-50740444 Msa0297090:CDS 50.0%
GAAACAGTGTTCCTTGGACG+AGG - chr2_3:50740477-50740496 None:intergenic 50.0%
GCAGGTGAAACAGTGTTCCT+TGG - chr2_3:50740483-50740502 None:intergenic 50.0%
GAACACTGTTTCACCTGCAG+TGG + chr2_3:50740485-50740504 Msa0297090:CDS 50.0%
TTGCAGCTGGAATGGCTCTT+TGG - chr2_3:50740605-50740624 None:intergenic 50.0%
AAGAGCCATTCCAGCTGCAA+AGG + chr2_3:50740605-50740624 Msa0297090:CDS 50.0%
TTGCCCAAGGCACATTCAAG+TGG + chr2_3:50740879-50740898 Msa0297090:CDS 50.0%
GTAGCCACTTGAATGTGCCT+TGG - chr2_3:50740886-50740905 None:intergenic 50.0%
TTCTTGCATGCCTGTGCTTG+TGG + chr2_3:50740909-50740928 Msa0297090:CDS 50.0%
GGTCCAGCAACTTCAGTTTC+TGG - chr2_3:50741032-50741051 None:intergenic 50.0%
GATGCAAAGAGAACCGGTGA+TGG + chr2_3:50741266-50741285 Msa0297090:CDS 50.0%
TGAGGTTGTTGCTGGATCAG+CGG + chr2_3:50741418-50741437 Msa0297090:CDS 50.0%
GATTCCCTCCTCTTCAGCAA+AGG + chr2_3:50741453-50741472 Msa0297090:CDS 50.0%
GAGGGACCTCTTCATGGTAA+TGG + chr2_3:50741602-50741621 Msa0297090:CDS 50.0%
!!! GAGACGGTGACCCTTTTTTG+AGG + chr2_3:50741639-50741658 Msa0297090:CDS 50.0%
TTTGAACATGAATGCCCCCG+TGG + chr2_3:50741752-50741771 Msa0297090:CDS 50.0%
TAACAGGAAACGATGGCCAC+GGG - chr2_3:50741771-50741790 None:intergenic 50.0%
ACATGATCTGTCCTCACTGC+AGG + chr2_3:50742194-50742213 Msa0297090:CDS 50.0%
ATGCCCTGTCGTGCAATTTG+AGG + chr2_3:50743221-50743240 Msa0297090:CDS 50.0%
TCGAAACCCTTCTCCGTCTC+CGG + chr2_3:50738043-50738062 Msa0297090:five_prime_UTR 55.0%
ATGAGGACTCGAACCGGAGA+CGG - chr2_3:50738059-50738078 None:intergenic 55.0%
! GTGGTGGAAGTGGAGGAAGA+CGG - chr2_3:50738092-50738111 None:intergenic 55.0%
TTGTCGGTGGAAGGAGAAGG+AGG - chr2_3:50738149-50738168 None:intergenic 55.0%
ACGTTGTCGGTGGAAGGAGA+AGG - chr2_3:50738152-50738171 None:intergenic 55.0%
ACTACGACGTTGTCGGTGGA+AGG - chr2_3:50738158-50738177 None:intergenic 55.0%
CCACCTTGCGACCTAGCAAA+TGG - chr2_3:50739513-50739532 None:intergenic 55.0%
! CCATTTGCTAGGTCGCAAGG+TGG + chr2_3:50739510-50739529 Msa0297090:five_prime_UTR 55.0%
TGCACTCTAGACGGTAAGCC+CGG - chr2_3:50739540-50739559 None:intergenic 55.0%
CGTCCTGCAAGTCGATCTGA+AGG + chr2_3:50739881-50739900 Msa0297090:five_prime_UTR 55.0%
!! CCACCTTCAGATCGACTTGC+AGG - chr2_3:50739887-50739906 None:intergenic 55.0%
CCTGCAAGTCGATCTGAAGG+TGG + chr2_3:50739884-50739903 Msa0297090:five_prime_UTR 55.0%
! ACTCACCCTGGTGTTAGAGC+TGG + chr2_3:50739992-50740011 Msa0297090:five_prime_UTR 55.0%
! CTCACCCTGGTGTTAGAGCT+GGG + chr2_3:50739993-50740012 Msa0297090:five_prime_UTR 55.0%
! TCACCCTGGTGTTAGAGCTG+GGG + chr2_3:50739994-50740013 Msa0297090:five_prime_UTR 55.0%
CAGTGCTGCAGAAGTTGAGG+AGG - chr2_3:50740020-50740039 None:intergenic 55.0%
!! ACCAACAGTGGCTCTGGTGT+TGG + chr2_3:50740276-50740295 Msa0297090:five_prime_UTR 55.0%
ACCAACACCAGAGCCACTGT+TGG - chr2_3:50740280-50740299 None:intergenic 55.0%
!! CAGTGGCTCTGGTGTTGGTA+TGG + chr2_3:50740281-50740300 Msa0297090:exon 55.0%
AGGGTGGGATTGTCCATCAC+CGG - chr2_3:50741282-50741301 None:intergenic 55.0%
TCCATTCTGCACAGCAGGGT+GGG - chr2_3:50741297-50741316 None:intergenic 55.0%
CGTCTCCATTCTGCACAGCA+GGG - chr2_3:50741301-50741320 None:intergenic 55.0%
TCGTCTCCATTCTGCACAGC+AGG - chr2_3:50741302-50741321 None:intergenic 55.0%
!! GGATCAGCGGCTGTTGATTC+AGG + chr2_3:50741431-50741450 Msa0297090:CDS 55.0%
AACAGGAAACGATGGCCACG+GGG - chr2_3:50741770-50741789 None:intergenic 55.0%
! GCGTCGATGAACTTTGGACC+AGG - chr2_3:50741918-50741937 None:intergenic 55.0%
TGTTCGCTGGGCATTAGCAC+AGG + chr2_3:50743011-50743030 Msa0297090:intron 55.0%
CTCGAACCGGAGACGGAGAA+GGG - chr2_3:50738052-50738071 None:intergenic 60.0%
ACTCGAACCGGAGACGGAGA+AGG - chr2_3:50738053-50738072 None:intergenic 60.0%
GGACGGATGAGGACTCGAAC+CGG - chr2_3:50738065-50738084 None:intergenic 60.0%
!! AAGACGGTGGTGGACGGATG+AGG - chr2_3:50738076-50738095 None:intergenic 60.0%
!! TGGAGGAAGACGGTGGTGGA+CGG - chr2_3:50738082-50738101 None:intergenic 60.0%
GAAGTGGAGGAAGACGGTGG+TGG - chr2_3:50738086-50738105 None:intergenic 60.0%
GTGGAAGTGGAGGAAGACGG+TGG - chr2_3:50738089-50738108 None:intergenic 60.0%
!! GGTGGTAGTGGTGGAAGTGG+AGG - chr2_3:50738099-50738118 None:intergenic 60.0%
!! GGTGGTGGTAGTGGTGGAAG+TGG - chr2_3:50738102-50738121 None:intergenic 60.0%
CACCACCGCTCCATCCTCAT+CGG + chr2_3:50738115-50738134 Msa0297090:five_prime_UTR 60.0%
GTGGAAGGAGAAGGAGGTGG+TGG - chr2_3:50738143-50738162 None:intergenic 60.0%
TCGGTGGAAGGAGAAGGAGG+TGG - chr2_3:50738146-50738165 None:intergenic 60.0%
! GCCCCATTTGCTAGGTCGCA+AGG + chr2_3:50739507-50739526 Msa0297090:five_prime_UTR 60.0%
TCTTCTCCGGGTAGAGGTGG+TGG + chr2_3:50739606-50739625 Msa0297090:five_prime_UTR 60.0%
! AGGCCCCAGCTCTAACACCA+GGG - chr2_3:50740000-50740019 None:intergenic 60.0%
GCTGCTGCCTCAGTTGCTTC+TGG + chr2_3:50740324-50740343 Msa0297090:CDS 60.0%
TCGAGAACGGCCACAAGCAC+AGG - chr2_3:50740922-50740941 None:intergenic 60.0%
TCCCACCCTGCTGTGCAGAA+TGG + chr2_3:50741293-50741312 Msa0297090:CDS 60.0%
CTCCATTCTGCACAGCAGGG+TGG - chr2_3:50741298-50741317 None:intergenic 60.0%
ACAGGAAACGATGGCCACGG+GGG - chr2_3:50741769-50741788 None:intergenic 60.0%
TTCCTGGAACGCCTGCAGTG+AGG - chr2_3:50742208-50742227 None:intergenic 60.0%
TCGCTGGGCATTAGCACAGG+TGG + chr2_3:50743014-50743033 Msa0297090:intron 60.0%
!! TGGAGCGGTGGTGGTAGTGG+TGG - chr2_3:50738108-50738127 None:intergenic 65.0%
! GGATGGAGCGGTGGTGGTAG+TGG - chr2_3:50738111-50738130 None:intergenic 65.0%
CGATGAGGATGGAGCGGTGG+TGG - chr2_3:50738117-50738136 None:intergenic 65.0%
!! TGGCGCCGATGAGGATGGAG+CGG - chr2_3:50738123-50738142 None:intergenic 65.0%
TAGGTCGCAAGGTGGTGCGC+CGG + chr2_3:50739518-50739537 Msa0297090:five_prime_UTR 65.0%
! GAGGCCCCAGCTCTAACACC+AGG - chr2_3:50740001-50740020 None:intergenic 65.0%
GGTTGCTGTGGCAGCAGCAG+CGG + chr2_3:50740302-50740321 Msa0297090:CDS 65.0%
GTCCTCACTGCAGGCGTTCC+AGG + chr2_3:50742203-50742222 Msa0297090:CDS 65.0%
CGCCGATGAGGATGGAGCGG+TGG - chr2_3:50738120-50738139 None:intergenic 70.0%
!! GGTGGTGGCGCCGATGAGGA+TGG - chr2_3:50738128-50738147 None:intergenic 70.0%
!! AGGAGGTGGTGGCGCCGATG+AGG - chr2_3:50738132-50738151 None:intergenic 70.0%
AGGTCGCAAGGTGGTGCGCC+GGG + chr2_3:50739519-50739538 Msa0297090:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 50738030 50743294 50738030 ID=Msa0297090;Name=Msa0297090
chr2_3 mRNA 50738030 50743294 50738030 ID=Msa0297090-mRNA-1;Parent=Msa0297090;Name=Msa0297090-mRNA-1;_AED=0.00;_eAED=0.00;_QI=1338|1|1|1|0|0.33|3|10|695
chr2_3 exon 50738030 50738478 50738030 ID=Msa0297090-mRNA-1:exon:15929;Parent=Msa0297090-mRNA-1
chr2_3 exon 50739411 50742291 50739411 ID=Msa0297090-mRNA-1:exon:15930;Parent=Msa0297090-mRNA-1
chr2_3 exon 50743189 50743294 50743189 ID=Msa0297090-mRNA-1:exon:15931;Parent=Msa0297090-mRNA-1
chr2_3 five_prime_UTR 50738030 50738478 50738030 ID=Msa0297090-mRNA-1:five_prime_utr;Parent=Msa0297090-mRNA-1
chr2_3 five_prime_UTR 50739411 50740299 50739411 ID=Msa0297090-mRNA-1:five_prime_utr;Parent=Msa0297090-mRNA-1
chr2_3 CDS 50740300 50742291 50740300 ID=Msa0297090-mRNA-1:cds;Parent=Msa0297090-mRNA-1
chr2_3 CDS 50743189 50743284 50743189 ID=Msa0297090-mRNA-1:cds;Parent=Msa0297090-mRNA-1
chr2_3 three_prime_UTR 50743285 50743294 50743285 ID=Msa0297090-mRNA-1:three_prime_utr;Parent=Msa0297090-mRNA-1
Gene Sequence

>Msa0297090

ATGGTTGCTGTGGCAGCAGCAGCGGCTGCTGCCTCAGTTGCTTCTGGCAAAACATTTACTGCTCCTGATCTTCCAAGTTTTGAAACTTGGTTAACTTCAAGTCTTCATATCTTGAGTAGAGTTCTCTGTGCAAAAGGGGGTTGTTTGGATGAATTTGAAATTAATAAAAGAAAACCTCGTCCAAGGAACACTGTTTCACCTGCAGTGGAAGAATCTTTGAAGAGTACAGATCCATTAGACGTTGCAGTATCTTGGTTACAGTGTGGTAGAGGGTTGAACACTAAGTTTTCGACTTTGTGGTGCCAAAGAGCCATTCCAGCTGCAAAGGAGATATATTTGAAAGATTTGCCTGCTTGTTATCCTACATCACAACATGAAGTTCACTTAGATAAGGCATTGCATGCATTTCGCTCAATGGTAAAAGGACCTGCAGTGCAACTTTTTGCAAAAACATTGGAAGAGGATTGCTCTTCCATTTGGAAATCAGGAAGGCAACTATGTGATGCTGTTAGTTTGACGGGAAAACCATGCATGCATCAAAGGCATGATGTTGAGGACAGTAATTCAGAATTGGGAACTTTGCCCAAGGCACATTCAAGTGGCTACTTTTTCTTGCATGCCTGTGCTTGTGGCCGTTCTCGAAAGTTACACCCAGATCCGTTTGATTTTGAATCAGCTGATGCTGGTTGCTTCTCTGACTGTGATAAGCTACTTCCTGCAGTCAAACTACCAGAAACTGAAGTTGCTGGACCTGTTCAATCTTCTTCGTGGAGTTTACTGCGTATTGGAGGTTCAAGATACTATGAATCGTCCAAAGGCTTACTTCAGAGTGGATTTTGTGCTACTGAGAAATATCTTCTGAAATGGACAATATACCTAGAGAAACAGAAAAGGCTAAATGGTTCAACAGAGAGTATAGGGAAACAAAGTTCTGTAATTGGGGGACCCAATGTTGAATATATTGCAGATGCAAAGAGAACCGGTGATGGACAATCCCACCCTGCTGTGCAGAATGGAGACGAAGACCTTAGAACATCTTTAGATATTAATAAAACTGACAACAAAAGTATAAGTTTTGGTAGAGGTTTTCCCATTTTTAAAATGAGAAAACCTTTTTCTGAGGTTGTTGCTGGATCAGCGGCTGTTGATTCAGGATTCCCTCCTCTTCAGCAAAGGAAATTGCCCACATTAGGTTCAGAGAAAGGTGTGAAGCAAAGCAGACCAAGCAATCAGAATGCAGAAAGGGTTAATGCAACTATCAATCATCAAATATCTCAAAAATCTCAAGATATGTCGTTTACTGAGGGACCTCTTCATGGTAATGGAAATAATGGTTGCAGAGACGGTGACCCTTTTTTGAGGATAGGTAGCAATGTATTACCTGTATACTTAGATGATGGTACAAGGAACCAACCACATTCTTCTTTAAAGCATGAGATAGTGTATGTTGGATTTGAACATGAATGCCCCCGTGGCCATCGTTTCCTGTTAAATGCAGATCATCTCACTGAACTTGGATCTTTATACTCATCATCTGATAAATCTCATTTATCTTCTTCTATGGAGCCTGTTGAAAGAAATCAGGCATCTCATACTAAAGTAAGCAAGACTGCTTCCTGGTCCAAAGTTCATCGACGCTCAAATGAAATTCTTTCTGCATCCATAAATAAGGAAAGAGATGTGGGCAAATCAAATGAAAGCATTCCTAATGGTCATCTGAATGCTGATGGATCAGTATATACTTCTACTCCACTGAAGGAAACAAATATGACATCTGTGAATATATTGGCAAAAGCCCCCAATCTCATGAAAGATTCTGGAGGGGATCTTCACACTATTAACATGGGTGGTGATGAACTTGCATTCTCCATACTGAACCGAAATTTGCCTATCTACATGATCTGTCCTCACTGCAGGCGTTCCAGGAATAAGAAAGATACAGCAGAGGTTAAGTTTGCAAGTGGTATCTCACAGCTTAAAAGGATTTTTATGGTCACACCAGCATTTCCTGTAATACTAGCAACATGCCCTGTCGTGCAATTTGAGGTACACCTTTCTTCTTGTAGTGTGCAGTTTTTGGATATTTGA
Protein sequence

>Msa0297090

MVAVAAAAAAASVASGKTFTAPDLPSFETWLTSSLHILSRVLCAKGGCLDEFEINKRKPRPRNTVSPAVEESLKSTDPLDVAVSWLQCGRGLNTKFSTLWCQRAIPAAKEIYLKDLPACYPTSQHEVHLDKALHAFRSMVKGPAVQLFAKTLEEDCSSIWKSGRQLCDAVSLTGKPCMHQRHDVEDSNSELGTLPKAHSSGYFFLHACACGRSRKLHPDPFDFESADAGCFSDCDKLLPAVKLPETEVAGPVQSSSWSLLRIGGSRYYESSKGLLQSGFCATEKYLLKWTIYLEKQKRLNGSTESIGKQSSVIGGPNVEYIADAKRTGDGQSHPAVQNGDEDLRTSLDINKTDNKSISFGRGFPIFKMRKPFSEVVAGSAAVDSGFPPLQQRKLPTLGSEKGVKQSRPSNQNAERVNATINHQISQKSQDMSFTEGPLHGNGNNGCRDGDPFLRIGSNVLPVYLDDGTRNQPHSSLKHEIVYVGFEHECPRGHRFLLNADHLTELGSLYSSSDKSHLSSSMEPVERNQASHTKVSKTASWSKVHRRSNEILSASINKERDVGKSNESIPNGHLNADGSVYTSTPLKETNMTSVNILAKAPNLMKDSGGDLHTINMGGDELAFSILNRNLPIYMICPHCRRSRNKKDTAEVKFASGISQLKRIFMVTPAFPVILATCPVVQFEVHLSSCSVQFLDI*