AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0300770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 270 sgRNAs with CRISPR-Local

Find 605 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATTTCGACTTTGCTTTC+TGG 0.096390 2_3:+56305806 None:intergenic
GTTTATGGATCCTGCTATTT+TGG 0.150155 2_3:-56301394 Msa0300770:five_prime_UTR
GCTTCTTTCAATAAGATTTC+TGG 0.151728 2_3:-56302181 Msa0300770:intron
CACATCAAAAGCTTGGATTT+TGG 0.163432 2_3:+56302369 None:intergenic
TAATTCAATGGTAATAATTT+TGG 0.163547 2_3:-56300294 Msa0300770:three_prime_UTR
TTAACAACTTGGCCAAATTA+TGG 0.177011 2_3:+56302488 None:intergenic
TGCTTGACCCTTCTTTCTTA+TGG 0.181101 2_3:-56301473 Msa0300770:five_prime_UTR
ACACCATCAACTGGGAATTT+TGG 0.196364 2_3:-56301435 Msa0300770:five_prime_UTR
AGTATTGTCACCCCATAATT+TGG 0.214204 2_3:-56302500 Msa0300770:five_prime_UTR
GGGACAATATGATTTGAAAT+TGG 0.223377 2_3:-56302965 Msa0300770:five_prime_UTR
TGCTGGAGACATTGAGTTTA+TGG 0.227188 2_3:-56301409 Msa0300770:five_prime_UTR
ATTTAACTGTGGGGAGTAAT+TGG 0.229577 2_3:+56301314 None:intergenic
TTAGCCACAGATAACGAAAT+TGG 0.244517 2_3:-56302748 Msa0300770:five_prime_UTR
CAATGGCTATTCTGAGAAAT+TGG 0.244621 2_3:-56302689 Msa0300770:five_prime_UTR
AAATACCAGATGCCGAATTC+TGG 0.245340 2_3:-56300967 Msa0300770:five_prime_UTR
AAATGTACATGGGTTTGTTT+TGG 0.274075 2_3:-56304773 Msa0300770:five_prime_UTR
ATTAGTGAAGCAGTTAATAT+TGG 0.284670 2_3:-56302604 Msa0300770:five_prime_UTR
AATGCAGAATGGAAATAGTA+TGG 0.288188 2_3:-56301058 Msa0300770:five_prime_UTR
GAATGTATTGCCTCCTCCTT+TGG 0.290868 2_3:-56303982 Msa0300770:five_prime_UTR
CTGCTTGGAGCTGAAAATCC+TGG 0.290871 2_3:+56301642 None:intergenic
TCTCATCTTAGTGATTCTTA+TGG 0.291954 2_3:-56301198 Msa0300770:five_prime_UTR
GATCTATACAACAGGACATT+TGG 0.297334 2_3:-56300943 Msa0300770:five_prime_UTR
TCAATCTCAAGCCAGTAATT+TGG 0.305228 2_3:-56301157 Msa0300770:five_prime_UTR
AGGAAATGATGCCAAATTAC+TGG 0.306330 2_3:+56301146 None:intergenic
CTGTTGTTTCTACGAAATCT+TGG 0.308238 2_3:+56302296 None:intergenic
CAAGAACTAGATTTCTTTAG+TGG 0.310493 2_3:+56302439 None:intergenic
TGGACAGCACCAGCTCTTAC+AGG 0.321752 2_3:-56302669 Msa0300770:five_prime_UTR
CTCCAGCGGCGAGAGTATTT+TGG 0.322698 2_3:-56305591 Msa0300770:five_prime_UTR
TTATGTTGTAATGTTCATTT+TGG 0.325275 2_3:+56303139 None:intergenic
TACTGGCGCTGTAACCAATA+TGG 0.333767 2_3:-56304018 Msa0300770:five_prime_UTR
ACCAATATGGAACGGCGGTC+AGG 0.335126 2_3:-56304005 Msa0300770:five_prime_UTR
ATACATTTCAGGGCTTGTTT+TGG 0.337557 2_3:-56304648 Msa0300770:intron
TGCTTGGAGCTGAAAATCCT+GGG 0.342880 2_3:+56301643 None:intergenic
TTTGGCATCATTTCCTCAAT+TGG 0.346224 2_3:-56301139 Msa0300770:five_prime_UTR
AAAAGAAAATCTCGATTGAT+TGG 0.352096 2_3:+56302408 None:intergenic
CTGTGTTATTAGGGGTTTGC+GGG 0.354775 2_3:-56303619 Msa0300770:intron
TAACAACTTGGCCAAATTAT+GGG 0.355974 2_3:+56302489 None:intergenic
TGGCTAATGGTAAAGACAAC+TGG 0.360424 2_3:+56303328 None:intergenic
GTTGGTAAGGGGAGGCTTCA+AGG 0.363029 2_3:-56301369 Msa0300770:five_prime_UTR
TGTGTATATCTTCATGAGAT+TGG 0.365166 2_3:-56304484 Msa0300770:five_prime_UTR
GTGTGGATGTCCTGGCGAAC+GGG 0.365813 2_3:-56303404 Msa0300770:five_prime_UTR
ACCTTTCCCAAGTGACAATA+GGG 0.366038 2_3:+56300187 None:intergenic
GACCTTTCCCAAGTGACAAT+AGG 0.366301 2_3:+56300186 None:intergenic
AGTCATATTCAACAAATTAC+TGG 0.367969 2_3:-56304035 Msa0300770:five_prime_UTR
TCTATTGACCTTGGTAGAAA+TGG 0.369388 2_3:-56303162 Msa0300770:five_prime_UTR
AGGAGGTGGGCTGCTAGGTT+TGG 0.370124 2_3:+56303116 None:intergenic
TCTACGTGTAGTTCTGGATT+TGG 0.374742 2_3:-56300517 Msa0300770:intron
CGGTCTTGTCAAATGGCAAT+TGG 0.379779 2_3:-56301095 Msa0300770:five_prime_UTR
CGATGTATTCAAAATGTACA+TGG 0.379789 2_3:-56304784 Msa0300770:five_prime_UTR
CCAGGAGGTGGTGGCCTGCT+TGG 0.380474 2_3:+56301627 None:intergenic
ATCTATACAACAGGACATTT+GGG 0.382808 2_3:-56300942 Msa0300770:five_prime_UTR
CCCTGACCGCCGTTCCATAT+TGG 0.385506 2_3:+56304004 None:intergenic
TACTCGAAGAAAACTGTAAC+TGG 0.386205 2_3:-56300754 Msa0300770:intron
GATTGCACAAGCAACACTTC+AGG 0.386503 2_3:-56303957 Msa0300770:five_prime_UTR
AGTGCACATTGATACCTTAA+AGG 0.386892 2_3:+56304742 None:intergenic
ATTGAGGAATCTGAAAATAT+AGG 0.391850 2_3:-56302220 Msa0300770:five_prime_UTR
ACACCCTCGGCAACTATCTC+TGG 0.394461 2_3:+56303308 None:intergenic
CTGCTGATTGAATCAGGCTT+GGG 0.395111 2_3:+56303549 None:intergenic
TCATATCAGACACCATCAAC+TGG 0.395865 2_3:-56301444 Msa0300770:five_prime_UTR
CATTTGGGATTTGAATTTGT+TGG 0.399032 2_3:-56300927 Msa0300770:five_prime_UTR
TCATGAAGATATACACAATC+TGG 0.401989 2_3:+56304490 None:intergenic
ATTGGTGGCTGAAGTTCATA+TGG 0.403627 2_3:-56305845 Msa0300770:five_prime_UTR
TCAGCAATGTGCGAGTTATT+CGG 0.403973 2_3:-56305765 Msa0300770:five_prime_UTR
TTGTATAGATCCCCAGAATT+CGG 0.405404 2_3:+56300955 None:intergenic
TGAGGAGCCATAGGCTTTGC+AGG 0.405473 2_3:+56303720 None:intergenic
AAATAAGAATTACAAACTTC+TGG 0.407429 2_3:+56302862 None:intergenic
GACAAGATTGGTATTGCAAA+TGG 0.408354 2_3:-56302262 Msa0300770:five_prime_UTR
TCTCGACATGATTTGTCTAA+TGG 0.409945 2_3:-56300797 Msa0300770:CDS
CCAGCTGCTGGCGGTCCAAC+CGG 0.410723 2_3:-56303582 Msa0300770:five_prime_UTR
GACGTCACAACAAATTCAAT+TGG 0.412708 2_3:-56303255 Msa0300770:five_prime_UTR
GATTGAATCAGGCTTGGGCT+TGG 0.414011 2_3:+56303554 None:intergenic
CCACCAAAATTCCCAGTTGA+TGG 0.415152 2_3:+56301432 None:intergenic
TTGCATTAATAACTGAAGTC+TGG 0.422178 2_3:+56301275 None:intergenic
GCAAGAGGTTTGCCTCCTAA+TGG 0.424207 2_3:-56303747 Msa0300770:five_prime_UTR
CCGGTTGGACCGCCAGCAGC+TGG 0.424338 2_3:+56303582 None:intergenic
GGCTTTGCAGGAATTCCATT+AGG 0.424867 2_3:+56303732 None:intergenic
CTACCTTTCTCCTCGGCTGT+TGG 0.425536 2_3:-56303522 Msa0300770:five_prime_UTR
TCCTCTTTGTGCTGAAGAGA+TGG 0.428304 2_3:-56307819 Msa0300770:five_prime_UTR
GACCATATTATCTGCTATAG+AGG 0.431042 2_3:+56302999 None:intergenic
AGAGTGCTGCTGATTGAATC+AGG 0.435831 2_3:+56303543 None:intergenic
CGGAATCTTGTTTACATAGT+GGG 0.435983 2_3:-56305742 Msa0300770:five_prime_UTR
AGTGGGATTGCCTCTCGATC+TGG 0.441826 2_3:-56305725 Msa0300770:five_prime_UTR
TGTGGATATAAATAGAGGTT+TGG 0.442085 2_3:-56300323 Msa0300770:three_prime_UTR
CCCACCTCCTGATGATGTAT+TGG 0.443007 2_3:-56303103 Msa0300770:five_prime_UTR
ATTGGTTGTAGATTTGTGTC+TGG 0.444037 2_3:-56306834 Msa0300770:intron
AATACCAGATGCCGAATTCT+GGG 0.444828 2_3:-56300966 Msa0300770:five_prime_UTR
GTTAAATTACTTTGAGAATG+AGG 0.447085 2_3:-56301298 Msa0300770:five_prime_UTR
TAGCCACAGATAACGAAATT+GGG 0.449265 2_3:-56302747 Msa0300770:five_prime_UTR
GATCCCCAGAATTCGGCATC+TGG 0.449769 2_3:+56300962 None:intergenic
CGGCAACTATCTCTGGCTAA+TGG 0.451746 2_3:+56303315 None:intergenic
GCTGCTGATTGAATCAGGCT+TGG 0.452131 2_3:+56303548 None:intergenic
TACACACTACATGTATTGTT+CGG 0.454017 2_3:+56305504 None:intergenic
CCTTTCTCCTCGGCTGTTGG+AGG 0.456237 2_3:-56303519 Msa0300770:five_prime_UTR
CCAGCATTTACAACATTACA+AGG 0.457339 2_3:+56302775 None:intergenic
GACTTAACCAATACATCATC+AGG 0.458636 2_3:+56303096 None:intergenic
TGTAGATTTGTGTCTGGTGT+TGG 0.459263 2_3:-56306828 Msa0300770:intron
GAACTTGTGGATATAAATAG+AGG 0.459509 2_3:-56300328 Msa0300770:three_prime_UTR
TCCTCAATGTTATTAGTAGC+AGG 0.459737 2_3:+56302235 None:intergenic
AGTGCTTTCGCTTAACAACT+TGG 0.460598 2_3:+56302477 None:intergenic
AGCCTCTATAGCAGATAATA+TGG 0.465786 2_3:-56303001 Msa0300770:five_prime_UTR
ACTTACAGTGGTGGTGAGAT+CGG 0.467913 2_3:+56308903 None:intergenic
TTAAGAAATCAACGATGGAT+TGG 0.469249 2_3:-56300474 Msa0300770:CDS
GCGGAATCTTGTTTACATAG+TGG 0.470998 2_3:-56305743 Msa0300770:five_prime_UTR
CCAAGCAGGCCACCACCTCC+TGG 0.473007 2_3:-56301627 Msa0300770:five_prime_UTR
GGGTTTCAACCACTGTTACA+TGG 0.473410 2_3:-56302727 Msa0300770:five_prime_UTR
ATGGATTCACATCAAAAGCT+TGG 0.473415 2_3:+56302362 None:intergenic
TTGGATTGCATGTCTAGCAT+TGG 0.473567 2_3:+56301333 None:intergenic
TCTCAAAGTAATTTAACTGT+GGG 0.480311 2_3:+56301304 None:intergenic
GAGCGAGAGAGCAAAACAAA+AGG 0.480604 2_3:+56308965 None:intergenic
CTTACAGTGGTGGTGAGATC+GGG 0.483119 2_3:+56308904 None:intergenic
TTCTCATGAGAGAATGGGGC+AGG 0.483516 2_3:-56301598 Msa0300770:five_prime_UTR
TCAATGTCTCGAACGGCAGC+TGG 0.485398 2_3:-56305543 Msa0300770:five_prime_UTR
AGAATCACTAAGATGAGAAA+AGG 0.488602 2_3:+56301203 None:intergenic
AGACACAGCTAAGACACAAA+TGG 0.492450 2_3:-56300864 Msa0300770:exon
GAATTTCTCCATAAGAAAGA+AGG 0.495183 2_3:+56301465 None:intergenic
TGGAATTCCTGCAAAGCCTA+TGG 0.496558 2_3:-56303727 Msa0300770:five_prime_UTR
ACAAATTGTCAGCCAGCTGC+TGG 0.498409 2_3:-56303594 Msa0300770:five_prime_UTR
TCATATGGAGATCGACATGC+AGG 0.499853 2_3:+56306757 None:intergenic
CCAATATGGAACGGCGGTCA+GGG 0.499952 2_3:-56304004 Msa0300770:five_prime_UTR
AATCTTTCCAGCATTGCTAA+AGG 0.500828 2_3:-56300833 Msa0300770:CDS
ATGATAAGGAAAAGATTGTC+GGG 0.501623 2_3:-56306738 Msa0300770:five_prime_UTR
TGACAATACTGAGTCATTCC+AGG 0.501667 2_3:+56302513 None:intergenic
AGAAATGCGGTCTTGTCAAA+TGG 0.502164 2_3:-56301102 Msa0300770:five_prime_UTR
CCTTGTAATGTTGTAAATGC+TGG 0.502660 2_3:-56302775 Msa0300770:five_prime_UTR
AGACCGCATTTCTAGACTGC+TGG 0.504350 2_3:+56301112 None:intergenic
ATGTCGATCTCCATATGATA+AGG 0.504836 2_3:-56306752 Msa0300770:five_prime_UTR
TTGTCAAATGGCAATTGGGA+TGG 0.505205 2_3:-56301090 Msa0300770:five_prime_UTR
GTTTGGTGGGAATAATTCAA+TGG 0.505495 2_3:-56300306 Msa0300770:three_prime_UTR
GATATAAATAGAGGTTTGGT+GGG 0.505725 2_3:-56300319 Msa0300770:three_prime_UTR
ACCATGCAAATGCGGCTACC+AGG 0.507230 2_3:-56307774 Msa0300770:intron
AGTGATGCTGATACAGATAA+GGG 0.507633 2_3:-56302580 Msa0300770:five_prime_UTR
TCTCAATCTGAGATAGCATC+AGG 0.508344 2_3:-56302940 Msa0300770:five_prime_UTR
TCTGTGTTATTAGGGGTTTG+CGG 0.510494 2_3:-56303620 Msa0300770:intron
TCATCAGGAGGTGGGCTGCT+AGG 0.510501 2_3:+56303111 None:intergenic
AGGCTTGGGCTTGGACAGTC+CGG 0.511660 2_3:+56303563 None:intergenic
TGGATTGCATGTCTAGCATT+GGG 0.512757 2_3:+56301334 None:intergenic
TGTGTGGATGTCCTGGCGAA+CGG 0.512836 2_3:-56303405 Msa0300770:five_prime_UTR
ACCAATACATCATCAGGAGG+TGG 0.514588 2_3:+56303102 None:intergenic
AATTTCAAATATATTGTCCA+TGG 0.514682 2_3:-56302545 Msa0300770:five_prime_UTR
AAATAATTGTGTGGATGTCC+TGG 0.514820 2_3:-56303412 Msa0300770:five_prime_UTR
AATATCCTTGCTTAGATTGG+TGG 0.515284 2_3:-56305860 Msa0300770:intron
TCGACCACCTTTAGCAATGC+TGG 0.515309 2_3:+56300826 None:intergenic
AACGCGAGGGAAAGATGAGT+TGG 0.515957 2_3:+56302837 None:intergenic
TATGATAAGGAAAAGATTGT+CGG 0.516686 2_3:-56306739 Msa0300770:five_prime_UTR
CAGATATATTACTTATTCAA+AGG 0.517732 2_3:-56304821 Msa0300770:five_prime_UTR
TGTCCATGGAATTTGATGCC+TGG 0.518665 2_3:-56302531 Msa0300770:five_prime_UTR
ATAAAGAGAACACTCGACTA+AGG 0.519115 2_3:+56300429 None:intergenic
ATTGCTAAAGGTGGTCGAGC+TGG 0.519364 2_3:-56300821 Msa0300770:CDS
GTGTTCAAATTCACAGGAGC+AGG 0.519927 2_3:+56303351 None:intergenic
ACCTGGTAGCCGCATTTGCA+TGG 0.520205 2_3:+56307773 None:intergenic
CCTCCAACAGCCGAGGAGAA+AGG 0.520433 2_3:+56303519 None:intergenic
TTTGTCTAATGGACTACCTA+TGG 0.521243 2_3:-56300786 Msa0300770:CDS
TGTCAAATGGCAATTGGGAT+GGG 0.521593 2_3:-56301089 Msa0300770:five_prime_UTR
AAGTGATGCTGATACAGATA+AGG 0.522896 2_3:-56302581 Msa0300770:five_prime_UTR
AATATGGTCTGTAATTCAAA+GGG 0.523705 2_3:-56302985 Msa0300770:five_prime_UTR
ACAGGTTGGTTCGTGATGAA+AGG 0.525913 2_3:-56302651 Msa0300770:five_prime_UTR
AGAGCAATCATGAGTGATGA+AGG 0.526292 2_3:-56307854 Msa0300770:five_prime_UTR
CATAATGGACATGGCTGAGA+AGG 0.527527 2_3:-56306800 Msa0300770:five_prime_UTR
TGTAAAACCCTATTGTCACT+TGG 0.529020 2_3:-56300194 Msa0300770:three_prime_UTR
CATGCAGCATGAGGAGCCAT+AGG 0.529675 2_3:+56303711 None:intergenic
AAGAGGCCTTTGTCAAGTGA+TGG 0.530557 2_3:-56303462 Msa0300770:five_prime_UTR
ATTCTGGGGATCTATACAAC+AGG 0.530648 2_3:-56300951 Msa0300770:five_prime_UTR
ATTGCACAAGCAACACTTCA+GGG 0.532468 2_3:-56303956 Msa0300770:five_prime_UTR
GCTGTGTCTTAGCTTTGCCA+TGG 0.536750 2_3:+56300878 None:intergenic
TAATATGGTCTGTAATTCAA+AGG 0.536991 2_3:-56302986 Msa0300770:five_prime_UTR
GGATATAAATAGAGGTTTGG+TGG 0.537560 2_3:-56300320 Msa0300770:three_prime_UTR
AGCGAGAGAGCAAAACAAAA+GGG 0.538816 2_3:+56308966 None:intergenic
GGGCGTCATAGTATAATGCC+TGG 0.539422 2_3:-56303441 Msa0300770:five_prime_UTR
GACCAAAATACTCTCGCCGC+TGG 0.543046 2_3:+56305589 None:intergenic
AACTGGGTGTTCAAATTCAC+AGG 0.543113 2_3:+56303345 None:intergenic
GAGGTGTCTTCTATTGACCT+TGG 0.543524 2_3:-56303171 Msa0300770:five_prime_UTR
ACGCGAGGGAAAGATGAGTT+GGG 0.547361 2_3:+56302838 None:intergenic
ACCCTATTGTCACTTGGGAA+AGG 0.547479 2_3:-56300188 Msa0300770:three_prime_UTR
GGTCTTGTCAAATGGCAATT+GGG 0.549345 2_3:-56301094 Msa0300770:five_prime_UTR
TCATGCATGGCTCAGAAACA+TGG 0.550715 2_3:-56304610 Msa0300770:intron
TTCTCAAAGTAATTTAACTG+TGG 0.552150 2_3:+56301303 None:intergenic
TCATGAGTGATGAAGGAGAA+AGG 0.552609 2_3:-56307847 Msa0300770:five_prime_UTR
AAAAGTTTCAATGTCTCGAA+CGG 0.554019 2_3:-56305550 Msa0300770:five_prime_UTR
TCCCAATTTCCGAAAATCGA+TGG 0.554027 2_3:+56301229 None:intergenic
TGTTGGTTAGCACCATGAGA+TGG 0.554047 2_3:+56302343 None:intergenic
CTGGTGTTGGCATCACATAA+TGG 0.556709 2_3:-56306815 Msa0300770:five_prime_UTR
TGTGGATGTCCTGGCGAACG+GGG 0.557385 2_3:-56303403 Msa0300770:five_prime_UTR
CAACTAAATATTGTCATGCA+TGG 0.557751 2_3:-56304623 Msa0300770:five_prime_UTR
AAACCCAATTTCGTTATCTG+TGG 0.558128 2_3:+56302744 None:intergenic
GTCAATAGAAGACACCTCAC+TGG 0.562007 2_3:+56303176 None:intergenic
GGGTTTAGTAAGTTTCATAG+AGG 0.565310 2_3:-56301003 Msa0300770:five_prime_UTR
GAAAGGAATGATCATCACAT+TGG 0.565540 2_3:-56302634 Msa0300770:five_prime_UTR
CAAATGGCAATTGGGATGGG+TGG 0.566091 2_3:-56301086 Msa0300770:five_prime_UTR
TTACCAACAGCCAAAATAGC+AGG 0.566259 2_3:+56301384 None:intergenic
ATTCCAGGCATCAAATTCCA+TGG 0.567279 2_3:+56302528 None:intergenic
GTAAAACCCTATTGTCACTT+GGG 0.567338 2_3:-56300193 Msa0300770:three_prime_UTR
AACAACTTGGCCAAATTATG+GGG 0.568223 2_3:+56302490 None:intergenic
GCTTGGAGCTGAAAATCCTG+GGG 0.569789 2_3:+56301644 None:intergenic
ATCAGGTTATGTTGAAGTAG+AGG 0.571599 2_3:-56302923 Msa0300770:five_prime_UTR
GACTGCTGGAGAGCCAATTG+AGG 0.571649 2_3:+56301126 None:intergenic
TTGGGCTTGGACAGTCCGGT+TGG 0.571798 2_3:+56303567 None:intergenic
AATTTCTCCATAAGAAAGAA+GGG 0.572217 2_3:+56301466 None:intergenic
TTGATGTTGTACAACACCCT+CGG 0.573292 2_3:+56303295 None:intergenic
GCAAAGTCGAAATCATCTGA+TGG 0.573853 2_3:-56305799 Msa0300770:five_prime_UTR
TTTGCAGGAATTCCATTAGG+AGG 0.574580 2_3:+56303735 None:intergenic
AACTCTGTTAGCACTGCAAG+AGG 0.575263 2_3:-56303762 Msa0300770:five_prime_UTR
TCGAGTATCATCGTAGCCAT+AGG 0.577382 2_3:+56300770 None:intergenic
GAATCTGAAAATATAGGCAG+TGG 0.581790 2_3:-56302214 Msa0300770:five_prime_UTR
AACTGTGCCTCCAACAGCCG+AGG 0.581834 2_3:+56303512 None:intergenic
GGCTAATGGTAAAGACAACT+GGG 0.584407 2_3:+56303329 None:intergenic
GTTAAGTCTATGCAATCTCA+AGG 0.585887 2_3:-56303081 Msa0300770:five_prime_UTR
CCAATACATCATCAGGAGGT+GGG 0.588558 2_3:+56303103 None:intergenic
GTGCAATCATCCAAAGGAGG+AGG 0.590239 2_3:+56303972 None:intergenic
CTATGGCTCCTCATGCTGCA+TGG 0.591342 2_3:-56303710 Msa0300770:intron
CAAGGTTCACCATGCGACAC+AGG 0.592494 2_3:+56302793 None:intergenic
CAGCACCAGCTCTTACAGGT+TGG 0.592816 2_3:-56302665 Msa0300770:five_prime_UTR
TCCTGCTACTAATAACATTG+AGG 0.593117 2_3:-56302236 Msa0300770:five_prime_UTR
AGAGGCCTTTGTCAAGTGAT+GGG 0.593697 2_3:-56303461 Msa0300770:five_prime_UTR
GAATGGAAATAGTATGGGTA+TGG 0.595198 2_3:-56301052 Msa0300770:five_prime_UTR
ATGCAGAATGGAAATAGTAT+GGG 0.595763 2_3:-56301057 Msa0300770:five_prime_UTR
ACGAACCAACCTGTAAGAGC+TGG 0.597248 2_3:+56302660 None:intergenic
GATGTATTCAAAATGTACAT+GGG 0.598169 2_3:-56304783 Msa0300770:five_prime_UTR
AATACTCATCCTGTGTCGCA+TGG 0.603073 2_3:-56302802 Msa0300770:five_prime_UTR
CATATCAGACACCATCAACT+GGG 0.603158 2_3:-56301443 Msa0300770:five_prime_UTR
CTTTCCAGCATTGCTAAAGG+TGG 0.603684 2_3:-56300830 Msa0300770:CDS
TTATTATGACTTGCAACGCG+AGG 0.604483 2_3:+56302823 None:intergenic
TATTATGACTTGCAACGCGA+GGG 0.606030 2_3:+56302824 None:intergenic
TAAGGAAAAGATTGTCGGGA+TGG 0.606274 2_3:-56306734 Msa0300770:five_prime_UTR
GGATGGCTGCAAACTGTGAG+AGG 0.607863 2_3:-56306717 Msa0300770:intron
GGATCTAAAGCATTATGCAA+TGG 0.612117 2_3:-56302706 Msa0300770:five_prime_UTR
TTTGATGTGAATCCATCTCA+TGG 0.612847 2_3:-56302355 Msa0300770:five_prime_UTR
GGGAATTAAGAAATCAACGA+TGG 0.612877 2_3:-56300479 Msa0300770:CDS
TTTCTTCTCATGAGAGAATG+GGG 0.615109 2_3:-56301602 Msa0300770:five_prime_UTR
GGGTGGAATGAAATGCAGAA+TGG 0.615590 2_3:-56301069 Msa0300770:five_prime_UTR
GAAAGCACTGAAAATCAGAA+TGG 0.615840 2_3:-56302463 Msa0300770:five_prime_UTR
TCCATCTCTTCAGCACAAAG+AGG 0.617037 2_3:+56307818 None:intergenic
AAGTAGTTTCAGCATACACT+AGG 0.619112 2_3:-56304432 Msa0300770:intron
ACACAATCTGGATTGCTGCA+AGG 0.621189 2_3:+56304502 None:intergenic
TGCAGAGTGATACAATGAAG+AGG 0.621546 2_3:-56303479 Msa0300770:five_prime_UTR
CTCAAAGTAATTTAACTGTG+GGG 0.623862 2_3:+56301305 None:intergenic
CAGCACTCTACCTTTCTCCT+CGG 0.624426 2_3:-56303529 Msa0300770:five_prime_UTR
AGTCGAAATCATCTGATGGA+CGG 0.627874 2_3:-56305795 Msa0300770:five_prime_UTR
CTCTTTATAAGTACAGACAA+TGG 0.628736 2_3:-56300414 Msa0300770:three_prime_UTR
TTTGGTGAAGCAAGCTGCGT+GGG 0.628743 2_3:-56300499 Msa0300770:CDS
CTATATTACCATGCAGCATG+AGG 0.628789 2_3:+56303702 None:intergenic
TCAATTGGCAGCTTTAGTCG+TGG 0.630456 2_3:-56303240 Msa0300770:five_prime_UTR
CAATTGAGACCATGCAAATG+CGG 0.632125 2_3:-56307782 Msa0300770:five_prime_UTR
TTGCTTGTGCAATCATCCAA+AGG 0.635021 2_3:+56303966 None:intergenic
TTAGCCAGAGATAGTTGCCG+AGG 0.635245 2_3:-56303312 Msa0300770:five_prime_UTR
TCTTCATCAGCCAGATCGAG+AGG 0.637478 2_3:+56305715 None:intergenic
GATTCAAAATTTGTCCAGTG+AGG 0.638522 2_3:-56303190 Msa0300770:five_prime_UTR
GCTGAGAAGGACGACACAGA+GGG 0.639942 2_3:-56306787 Msa0300770:five_prime_UTR
GTGGATGTCCTGGCGAACGG+GGG 0.640467 2_3:-56303402 Msa0300770:five_prime_UTR
AATTGTCAGCCAGCTGCTGG+CGG 0.645275 2_3:-56303591 Msa0300770:five_prime_UTR
CATTCATGCAGCTTCTCCAG+CGG 0.645670 2_3:-56305605 Msa0300770:intron
AGAAGGACGACACAGAGGGA+CGG 0.653177 2_3:-56306783 Msa0300770:five_prime_UTR
GCTTTAGATCCATGTAACAG+TGG 0.655151 2_3:+56302718 None:intergenic
GCGCTGTAACCAATATGGAA+CGG 0.659327 2_3:-56304013 Msa0300770:five_prime_UTR
ATACCAGATGCCGAATTCTG+GGG 0.660507 2_3:-56300965 Msa0300770:five_prime_UTR
TAGCCAGAGATAGTTGCCGA+GGG 0.660669 2_3:-56303311 Msa0300770:five_prime_UTR
CATATGGAGATCGACATGCA+GGG 0.664744 2_3:+56306758 None:intergenic
TGACGCCCATCACTTGACAA+AGG 0.670527 2_3:+56303456 None:intergenic
GGCTGAGAAGGACGACACAG+AGG 0.672550 2_3:-56306788 Msa0300770:five_prime_UTR
CTTGTGCAATCATCCAAAGG+AGG 0.673921 2_3:+56303969 None:intergenic
CTTGGAGCTGAAAATCCTGG+GGG 0.680888 2_3:+56301645 None:intergenic
TCTCCAGCAGTCTAGAAATG+CGG 0.693479 2_3:-56301115 Msa0300770:five_prime_UTR
GGTAAGAGAATTGCACGAGG+TGG 0.694773 2_3:+56308987 None:intergenic
TTGGCATCACATAATGGACA+TGG 0.695342 2_3:-56306809 Msa0300770:five_prime_UTR
TTAACCAATACATCATCAGG+AGG 0.718864 2_3:+56303099 None:intergenic
GGGAAGAATACGAAACTGTG+AGG 0.724920 2_3:+56308924 None:intergenic
ATTTGGTGAAGCAAGCTGCG+TGG 0.739894 2_3:-56300500 Msa0300770:CDS
GCAATGTGCGAGTTATTCGG+CGG 0.747031 2_3:-56305762 Msa0300770:five_prime_UTR
CTGTAACCAATATGGAACGG+CGG 0.747133 2_3:-56304010 Msa0300770:five_prime_UTR
ATGAGGAAGACTTACAGTGG+TGG 0.774517 2_3:+56308894 None:intergenic
AAGGGTAAGAGAATTGCACG+AGG 0.820194 2_3:+56308984 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAATAATTAAATAATT+TGG - chr2_3:56300679-56300698 Msa0300770:intron 0.0%
!! ATAATTAAATAATTTGGATT+AGG - chr2_3:56300685-56300704 Msa0300770:intron 10.0%
!! AATAGATATAAAAAAAATAG+AGG + chr2_3:56301530-56301549 None:intergenic 10.0%
!!! TTTATTGATCTTTTAAAATT+TGG - chr2_3:56301548-56301567 Msa0300770:intron 10.0%
!! AATTATCTTAAAAAAAATGT+TGG - chr2_3:56301848-56301867 Msa0300770:intron 10.0%
!! ATTATCTTAAAAAAAATGTT+GGG - chr2_3:56301849-56301868 Msa0300770:intron 10.0%
!!! ATAATTACAAATACAATTTT+CGG + chr2_3:56304200-56304219 None:intergenic 10.0%
!!! TTTTGATTTAATTTTTGTTA+TGG - chr2_3:56308437-56308456 Msa0300770:intron 10.0%
!! AAAAAAAAAGCTGAATTATT+CGG + chr2_3:56300371-56300390 None:intergenic 15.0%
!!! ATTTCTATGTTCTTTTTATT+AGG - chr2_3:56301409-56301428 Msa0300770:five_prime_UTR 15.0%
!! TTTATGCAATTAAAAATGAA+AGG + chr2_3:56303010-56303029 None:intergenic 15.0%
!!! ATATATAGTTCATAATTTGT+TGG - chr2_3:56303990-56304009 Msa0300770:five_prime_UTR 15.0%
!!! TAATTACAAATACAATTTTC+GGG + chr2_3:56304199-56304218 None:intergenic 15.0%
!! TGAAAAGATGTATTAATTAA+TGG + chr2_3:56304238-56304257 None:intergenic 15.0%
!!! AACTTTTAATAAAAGTATGA+GGG + chr2_3:56304281-56304300 None:intergenic 15.0%
!!! AATTTTTGTTATGGTTTAAT+TGG - chr2_3:56308446-56308465 Msa0300770:intron 15.0%
!!! TAATTCAATGGTAATAATTT+TGG - chr2_3:56308857-56308876 Msa0300770:intron 15.0%
!!! AGTTTTTAACTATGAAAATA+AGG - chr2_3:56308919-56308938 Msa0300770:five_prime_UTR 15.0%
!! GATGAAATCAAAAACAATTA+GGG + chr2_3:56300335-56300354 None:intergenic 20.0%
!!! TTTGTTAGTTTTGAACTATT+AGG - chr2_3:56300436-56300455 Msa0300770:exon 20.0%
!! CATGAAAAATCATAGATTAA+AGG + chr2_3:56300831-56300850 None:intergenic 20.0%
!!! ATTTATTTGTTTGTTGCATT+AGG - chr2_3:56301063-56301082 Msa0300770:five_prime_UTR 20.0%
!!! TTTATTTGTTTGTTGCATTA+GGG - chr2_3:56301064-56301083 Msa0300770:five_prime_UTR 20.0%
!! ATTGTTATAACTCATATTTG+TGG - chr2_3:56301095-56301114 Msa0300770:five_prime_UTR 20.0%
!! AAATTAGATGCAATAATTTC+AGG - chr2_3:56301179-56301198 Msa0300770:five_prime_UTR 20.0%
!!! GTCACAAAAATATTTTAACA+AGG + chr2_3:56301947-56301966 None:intergenic 20.0%
!! ACTAAGAATAAAAATTGACA+GGG + chr2_3:56302016-56302035 None:intergenic 20.0%
!! TACTACTGAAATTAATATTG+TGG - chr2_3:56302111-56302130 Msa0300770:intron 20.0%
!! CATGTATCTTAAATACATAT+TGG + chr2_3:56302216-56302235 None:intergenic 20.0%
!! ATGCATACATAATTATAAAG+GGG + chr2_3:56302523-56302542 None:intergenic 20.0%
!! CATGCATACATAATTATAAA+GGG + chr2_3:56302524-56302543 None:intergenic 20.0%
!!! TTGTTTTCTTTTCAAATTTG+TGG - chr2_3:56303673-56303692 Msa0300770:intron 20.0%
!!! AATTACAAATACAATTTTCG+GGG + chr2_3:56304198-56304217 None:intergenic 20.0%
!! TTTGTAATTATATCTTGTCT+TGG - chr2_3:56304209-56304228 Msa0300770:intron 20.0%
!!! CAACTTTTAATAAAAGTATG+AGG + chr2_3:56304282-56304301 None:intergenic 20.0%
!! CAGATATATTACTTATTCAA+AGG - chr2_3:56304330-56304349 Msa0300770:intron 20.0%
!! ATGTATAAACCAATAACATA+AGG + chr2_3:56304489-56304508 None:intergenic 20.0%
!!! TTATTGGTTTATACATTTCA+GGG - chr2_3:56304493-56304512 Msa0300770:five_prime_UTR 20.0%
!! ATTAAAAGTTTAACTAGTCA+AGG + chr2_3:56304606-56304625 None:intergenic 20.0%
!! ATAAAATCATATGTTGCAAT+TGG - chr2_3:56304790-56304809 Msa0300770:five_prime_UTR 20.0%
!! ATAGTTTAGTATCACAAAAA+AGG + chr2_3:56304894-56304913 None:intergenic 20.0%
!!! TATTACATTTTCTCTGTTTT+TGG - chr2_3:56305282-56305301 Msa0300770:intron 20.0%
!!! ATTACATTTTCTCTGTTTTT+GGG - chr2_3:56305283-56305302 Msa0300770:intron 20.0%
!! ATTCACACAAAATATTGAAT+CGG + chr2_3:56305339-56305358 None:intergenic 20.0%
!!! CTAACTTTTTATCTTGATTA+TGG - chr2_3:56305361-56305380 Msa0300770:intron 20.0%
!!! TTATGTTGTAATGTTCATTT+TGG + chr2_3:56306015-56306034 None:intergenic 20.0%
!! AAATAAGAATTACAAACTTC+TGG + chr2_3:56306292-56306311 None:intergenic 20.0%
!! AATTTCAAATATATTGTCCA+TGG - chr2_3:56306606-56306625 Msa0300770:intron 20.0%
!! CAAAATAGAATAACATAAGT+AGG + chr2_3:56307079-56307098 None:intergenic 20.0%
!!! CTACTTATGTTATTCTATTT+TGG - chr2_3:56307077-56307096 Msa0300770:intron 20.0%
!!! AAAAAAATCTTGTTTTTTCG+TGG - chr2_3:56307137-56307156 Msa0300770:intron 20.0%
!!! AAAAAATCTTGTTTTTTCGT+GGG - chr2_3:56307138-56307157 Msa0300770:intron 20.0%
!!! AATTTACTTTTGATAAGTGT+TGG - chr2_3:56307170-56307189 Msa0300770:intron 20.0%
!!! ATTTACTTTTGATAAGTGTT+GGG - chr2_3:56307171-56307190 Msa0300770:intron 20.0%
!! ATGTAAAATGTATTTCATTG+AGG + chr2_3:56307300-56307319 None:intergenic 20.0%
! CGATGAAATCAAAAACAATT+AGG + chr2_3:56300336-56300355 None:intergenic 25.0%
!! CATAATCGAGTGATTTATTT+TGG - chr2_3:56300405-56300424 Msa0300770:three_prime_UTR 25.0%
!!! GAGTGATTTATTTTGGATTT+TGG - chr2_3:56300412-56300431 Msa0300770:three_prime_UTR 25.0%
!!! AGTTTTGAACTATTAGGATT+AGG - chr2_3:56300442-56300461 Msa0300770:exon 25.0%
! CTGAATAACGAACTATAAAA+TGG + chr2_3:56300505-56300524 None:intergenic 25.0%
!!! TGATGTATTTTGGATTTTGA+TGG - chr2_3:56300565-56300584 Msa0300770:intron 25.0%
!! TTATTTGTTTGTTGCATTAG+GGG - chr2_3:56301065-56301084 Msa0300770:five_prime_UTR 25.0%
! ACACTATAGAGTAAATATTG+TGG + chr2_3:56301245-56301264 None:intergenic 25.0%
! TTTATTAGGCATTAATCTGA+AGG - chr2_3:56301423-56301442 Msa0300770:five_prime_UTR 25.0%
! AAGGTTTGTATATAATCTGT+TGG - chr2_3:56301442-56301461 Msa0300770:five_prime_UTR 25.0%
! TATTGATCCACAATGAAATT+GGG + chr2_3:56301716-56301735 None:intergenic 25.0%
! TTATTGATCCACAATGAAAT+TGG + chr2_3:56301717-56301736 None:intergenic 25.0%
!! AATAATCGTTTGGATGTTTT+GGG - chr2_3:56301732-56301751 Msa0300770:intron 25.0%
!!! TTTTTATTTCTTGCTGTTTC+AGG - chr2_3:56301884-56301903 Msa0300770:intron 25.0%
! GACTAAGAATAAAAATTGAC+AGG + chr2_3:56302017-56302036 None:intergenic 25.0%
! TTGGTTTACAACAAAATGAA+GGG + chr2_3:56302197-56302216 None:intergenic 25.0%
!! ATTGGTTTACAACAAAATGA+AGG + chr2_3:56302198-56302217 None:intergenic 25.0%
! TGCTCATGAATATAGAAAAT+AGG + chr2_3:56302272-56302291 None:intergenic 25.0%
!! ACAATCTTTTCCTTATCATA+TGG + chr2_3:56302412-56302431 None:intergenic 25.0%
! TATGATAAGGAAAAGATTGT+CGG - chr2_3:56302412-56302431 Msa0300770:five_prime_UTR 25.0%
!! TTTTAACAGTACATTTCTGT+AGG - chr2_3:56302463-56302482 Msa0300770:five_prime_UTR 25.0%
! GCATGCATACATAATTATAA+AGG + chr2_3:56302525-56302544 None:intergenic 25.0%
! AATAAGTTGTTTATCCAAAC+AGG + chr2_3:56302609-56302628 None:intergenic 25.0%
! TTAGAGAACTTATGAAGATA+AGG - chr2_3:56302760-56302779 Msa0300770:five_prime_UTR 25.0%
! TTTATGTTTCAGATAGAACA+AGG - chr2_3:56302928-56302947 Msa0300770:five_prime_UTR 25.0%
!! CATAAACAATCTTTGAAAAC+AGG + chr2_3:56303057-56303076 None:intergenic 25.0%
! CCATGTTTAAAAAATAAGCA+TGG + chr2_3:56303230-56303249 None:intergenic 25.0%
!!! CCATGCTTATTTTTTAAACA+TGG - chr2_3:56303227-56303246 Msa0300770:five_prime_UTR 25.0%
! AATCTAAGCAAGGATATTAT+CGG + chr2_3:56303289-56303308 None:intergenic 25.0%
!! TTTTTCTACTAGATTGCAAT+GGG + chr2_3:56303863-56303882 None:intergenic 25.0%
! TTAAAAATAATGCTTTGTGC+AGG + chr2_3:56303931-56303950 None:intergenic 25.0%
!! ACTTTATAAACTAGTTTGTG+AGG + chr2_3:56304059-56304078 None:intergenic 25.0%
! GATGTATTCAAAATGTACAT+GGG - chr2_3:56304368-56304387 Msa0300770:intron 25.0%
! TTATCAGTTCCTTATGTTAT+TGG - chr2_3:56304477-56304496 Msa0300770:five_prime_UTR 25.0%
!!! GTTATTGGTTTATACATTTC+AGG - chr2_3:56304492-56304511 Msa0300770:five_prime_UTR 25.0%
! GAAAGGGTAAAAATCTATAT+AGG + chr2_3:56304584-56304603 None:intergenic 25.0%
! TTAGTATCACAAAAAAGGTA+AGG + chr2_3:56304889-56304908 None:intergenic 25.0%
! GTTGAGTATGGTTAATTATT+TGG - chr2_3:56304950-56304969 Msa0300770:intron 25.0%
!!! ATAAAAGGGAAGGATTTTTT+AGG - chr2_3:56304997-56305016 Msa0300770:intron 25.0%
!!! TAAAAGGGAAGGATTTTTTA+GGG - chr2_3:56304998-56305017 Msa0300770:intron 25.0%
! AGTCATATTCAACAAATTAC+TGG - chr2_3:56305116-56305135 Msa0300770:intron 25.0%
!!! CTTGAAGAATTTTTTACAGT+GGG + chr2_3:56305224-56305243 None:intergenic 25.0%
!!! ACTTGAAGAATTTTTTACAG+TGG + chr2_3:56305225-56305244 None:intergenic 25.0%
! ATGTAATAGAAAAGAGGTAA+AGG + chr2_3:56305270-56305289 None:intergenic 25.0%
! GAGAAAATGTAATAGAAAAG+AGG + chr2_3:56305276-56305295 None:intergenic 25.0%
!! ATATAGTGTTGGATTTAGAT+TGG - chr2_3:56305466-56305485 Msa0300770:intron 25.0%
!! ACATTTGAATCTGTGTTATT+AGG - chr2_3:56305522-56305541 Msa0300770:five_prime_UTR 25.0%
!! CATTTGAATCTGTGTTATTA+GGG - chr2_3:56305523-56305542 Msa0300770:five_prime_UTR 25.0%
!! ATTTGAATCTGTGTTATTAG+GGG - chr2_3:56305524-56305543 Msa0300770:five_prime_UTR 25.0%
!! CAAATTTTGAATCTCTTCAT+TGG + chr2_3:56305954-56305973 None:intergenic 25.0%
! TAATATGGTCTGTAATTCAA+AGG - chr2_3:56306165-56306184 Msa0300770:intron 25.0%
! AATATGGTCTGTAATTCAAA+GGG - chr2_3:56306166-56306185 Msa0300770:intron 25.0%
! ATTAGTGAAGCAGTTAATAT+TGG - chr2_3:56306547-56306566 Msa0300770:intron 25.0%
! AAAAGAAAATCTCGATTGAT+TGG + chr2_3:56306746-56306765 None:intergenic 25.0%
!! AACCAACAATTTCTAAAAAG+CGG - chr2_3:56306823-56306842 Msa0300770:five_prime_UTR 25.0%
! ATTGAGGAATCTGAAAATAT+AGG - chr2_3:56306931-56306950 Msa0300770:intron 25.0%
! TGCTAAATATAAATCTACAG+TGG + chr2_3:56307026-56307045 None:intergenic 25.0%
! TATTTAGCATCTCTTATGAT+TGG - chr2_3:56307037-56307056 Msa0300770:intron 25.0%
! ATCACTGAAAAAAAGTAGAA+AGG - chr2_3:56307318-56307337 Msa0300770:intron 25.0%
! TTAAAATCAACCAATATTGC+AGG + chr2_3:56307631-56307650 None:intergenic 25.0%
!! TTAATTGTTTTCCTTTTGAC+AGG - chr2_3:56307647-56307666 Msa0300770:intron 25.0%
!! TAATTGTTTTCCTTTTGACA+GGG - chr2_3:56307648-56307667 Msa0300770:intron 25.0%
! AATTTCTCCATAAGAAAGAA+GGG + chr2_3:56307688-56307707 None:intergenic 25.0%
! TCTCAAAGTAATTTAACTGT+GGG + chr2_3:56307850-56307869 None:intergenic 25.0%
! TTCTCAAAGTAATTTAACTG+TGG + chr2_3:56307851-56307870 None:intergenic 25.0%
!! GTTAAATTACTTTGAGAATG+AGG - chr2_3:56307853-56307872 Msa0300770:five_prime_UTR 25.0%
!!! ACTAGTTGAAGATATTTTTG+TGG + chr2_3:56308528-56308547 None:intergenic 25.0%
! TGCTGTGTTCAAATATATAT+TGG + chr2_3:56308557-56308576 None:intergenic 25.0%
! TTGTAAAAAAACAATCACTC+AGG - chr2_3:56308599-56308618 Msa0300770:intron 25.0%
!! AATTTTCTTTACTGAACTTG+TGG - chr2_3:56308810-56308829 Msa0300770:intron 25.0%
AGGATTGAATCGAGAAATTA+GGG + chr2_3:56300300-56300319 None:intergenic 30.0%
TAGGATTGAATCGAGAAATT+AGG + chr2_3:56300301-56300320 None:intergenic 30.0%
AATTAGGGATCTGTGAAATT+AGG + chr2_3:56300320-56300339 None:intergenic 30.0%
GAACTATTAGGATTAGGTAT+TGG - chr2_3:56300448-56300467 Msa0300770:exon 30.0%
! CATAATCCACTGATGTATTT+TGG - chr2_3:56300555-56300574 Msa0300770:intron 30.0%
CAAAATCCAAAATACATCAG+TGG + chr2_3:56300564-56300583 None:intergenic 30.0%
!!! TTGATGGATTTCGATTTTGT+AGG - chr2_3:56300581-56300600 Msa0300770:intron 30.0%
!! TTTGTAGGTATTGAACTGTT+AGG - chr2_3:56300596-56300615 Msa0300770:intron 30.0%
GTGGTACAGTGTTAAATTTA+TGG - chr2_3:56300879-56300898 Msa0300770:five_prime_UTR 30.0%
ACTCATATTTGTGGATTTCT+TGG - chr2_3:56301104-56301123 Msa0300770:five_prime_UTR 30.0%
CTCATATTTGTGGATTTCTT+GGG - chr2_3:56301105-56301124 Msa0300770:five_prime_UTR 30.0%
CTTGGGTAAAATTGTATTGT+TGG - chr2_3:56301122-56301141 Msa0300770:five_prime_UTR 30.0%
TAAAAGAAACTTCCTACACT+CGG + chr2_3:56301152-56301171 None:intergenic 30.0%
AGAGTAAATATTGTGGACAA+AGG + chr2_3:56301238-56301257 None:intergenic 30.0%
!!! AATTGTGTCACTTGGTTTTT+TGG - chr2_3:56301504-56301523 Msa0300770:intron 30.0%
TTATTGTCTGTCAAACCAAT+TGG - chr2_3:56301618-56301637 Msa0300770:five_prime_UTR 30.0%
AAATTGGGTTATATGAATCC+AGG + chr2_3:56301701-56301720 None:intergenic 30.0%
CATATAACCCAATTTCATTG+TGG - chr2_3:56301706-56301725 Msa0300770:intron 30.0%
ATTGTGGATCAATAATCGTT+TGG - chr2_3:56301722-56301741 Msa0300770:intron 30.0%
! CAATAATCGTTTGGATGTTT+TGG - chr2_3:56301731-56301750 Msa0300770:intron 30.0%
! ATAATCGTTTGGATGTTTTG+GGG - chr2_3:56301733-56301752 Msa0300770:intron 30.0%
!!! GCTTTGCTGTTTTTTAAGTT+GGG - chr2_3:56301818-56301837 Msa0300770:intron 30.0%
AATAAAAATTGACAGGGACA+GGG + chr2_3:56302010-56302029 None:intergenic 30.0%
TTCTATATTCATGAGCAATG+AGG - chr2_3:56302275-56302294 Msa0300770:five_prime_UTR 30.0%
ATGATAAGGAAAAGATTGTC+GGG - chr2_3:56302413-56302432 Msa0300770:five_prime_UTR 30.0%
TAATTATAAAGGGGAAGAAG+AGG + chr2_3:56302514-56302533 None:intergenic 30.0%
AAGGTAGATCTCAGTTATTA+TGG - chr2_3:56302947-56302966 Msa0300770:five_prime_UTR 30.0%
AGGTAGATCTCAGTTATTAT+GGG - chr2_3:56302948-56302967 Msa0300770:five_prime_UTR 30.0%
! ACCATGTTTTCACTTCTTTA+CGG + chr2_3:56303106-56303125 None:intergenic 30.0%
CTATAGAATGATAGCTAAAC+AGG - chr2_3:56303151-56303170 Msa0300770:five_prime_UTR 30.0%
! AGCTAAACAGGTTTTACATT+CGG - chr2_3:56303163-56303182 Msa0300770:five_prime_UTR 30.0%
GATAATATCCTTGCTTAGAT+TGG - chr2_3:56303288-56303307 Msa0300770:five_prime_UTR 30.0%
AAATCTTCCACTTAGAACAA+GGG + chr2_3:56303513-56303532 None:intergenic 30.0%
TAAATCTTCCACTTAGAACA+AGG + chr2_3:56303514-56303533 None:intergenic 30.0%
!!! GAGAGTATTTTGGTCAATAT+GGG - chr2_3:56303570-56303589 Msa0300770:five_prime_UTR 30.0%
AAAAGTTTCAATGTCTCGAA+CGG - chr2_3:56303601-56303620 Msa0300770:five_prime_UTR 30.0%
TACACACTACATGTATTGTT+CGG + chr2_3:56303650-56303669 None:intergenic 30.0%
AGAGGTTTAAACAGAGAATT+TGG + chr2_3:56303834-56303853 None:intergenic 30.0%
! CTTTTTCTACTAGATTGCAA+TGG + chr2_3:56303864-56303883 None:intergenic 30.0%
!! TTCATAATTTGTTGGTCTAG+TGG - chr2_3:56303998-56304017 Msa0300770:five_prime_UTR 30.0%
AAAAAAGCAAACTACACGTA+AGG + chr2_3:56304031-56304050 None:intergenic 30.0%
CACACATATTCAAACCATTT+CGG - chr2_3:56304142-56304161 Msa0300770:intron 30.0%
CGATGTATTCAAAATGTACA+TGG - chr2_3:56304367-56304386 Msa0300770:intron 30.0%
!! AAATGTACATGGGTTTGTTT+TGG - chr2_3:56304378-56304397 Msa0300770:intron 30.0%
CAACTAAATATTGTCATGCA+TGG - chr2_3:56304528-56304547 Msa0300770:intron 30.0%
AGTTTAACTAGTCAAGGAAA+GGG + chr2_3:56304600-56304619 None:intergenic 30.0%
AAGTTTAACTAGTCAAGGAA+AGG + chr2_3:56304601-56304620 None:intergenic 30.0%
TCATGAAGATATACACAATC+TGG + chr2_3:56304664-56304683 None:intergenic 30.0%
TGTGTATATCTTCATGAGAT+TGG - chr2_3:56304667-56304686 Msa0300770:intron 30.0%
TTCTGAATTCATGTTGAGTA+TGG - chr2_3:56304938-56304957 Msa0300770:intron 30.0%
ATGATGACTCTGTCATAAAA+GGG - chr2_3:56304983-56305002 Msa0300770:intron 30.0%
! GACATCCACACAATTATTTT+TGG + chr2_3:56305738-56305757 None:intergenic 30.0%
! GGGACAATATGATTTGAAAT+TGG - chr2_3:56306186-56306205 Msa0300770:intron 30.0%
!! TTTTGATAGTCAGAGACTTA+AGG - chr2_3:56306264-56306283 Msa0300770:intron 30.0%
TAACAACTTGGCCAAATTAT+GGG + chr2_3:56306665-56306684 None:intergenic 30.0%
TTAACAACTTGGCCAAATTA+TGG + chr2_3:56306666-56306685 None:intergenic 30.0%
CAAGAACTAGATTTCTTTAG+TGG + chr2_3:56306715-56306734 None:intergenic 30.0%
! ATTTTCTTTTGCAAGACAAG+AGG - chr2_3:56306756-56306775 Msa0300770:five_prime_UTR 30.0%
!!! AACCGCTTTTTAGAAATTGT+TGG + chr2_3:56306828-56306847 None:intergenic 30.0%
! AGAAACAACAGACTTTTCTT+TGG - chr2_3:56306867-56306886 Msa0300770:intron 30.0%
GCTTCTTTCAATAAGATTTC+TGG - chr2_3:56306970-56306989 Msa0300770:intron 30.0%
CATCAAAATTTGTGTTGTCA+TGG - chr2_3:56307257-56307276 Msa0300770:intron 30.0%
AAAAAAGTAGAAAGGTCAAC+TGG - chr2_3:56307326-56307345 Msa0300770:intron 30.0%
TTTACAGTAGAGTAGATAAC+TGG - chr2_3:56307402-56307421 Msa0300770:intron 30.0%
TTATGATAATACCTCCAAGT+TGG - chr2_3:56307425-56307444 Msa0300770:intron 30.0%
! TCATTTCATGTTTTCCAACT+TGG + chr2_3:56307442-56307461 None:intergenic 30.0%
! TTTTTCTTCTCATGAGAGAA+TGG - chr2_3:56307547-56307566 Msa0300770:intron 30.0%
! TTTTCTTCTCATGAGAGAAT+GGG - chr2_3:56307548-56307567 Msa0300770:intron 30.0%
GAATTTCTCCATAAGAAAGA+AGG + chr2_3:56307689-56307708 None:intergenic 30.0%
CTCAAAGTAATTTAACTGTG+GGG + chr2_3:56307849-56307868 None:intergenic 30.0%
TTGCATTAATAACTGAAGTC+TGG + chr2_3:56307879-56307898 None:intergenic 30.0%
!!! ACAACAAAACCATCGATTTT+CGG - chr2_3:56307913-56307932 Msa0300770:intron 30.0%
AGAATCACTAAGATGAGAAA+AGG + chr2_3:56307951-56307970 None:intergenic 30.0%
TCTCATCTTAGTGATTCTTA+TGG - chr2_3:56307953-56307972 Msa0300770:intron 30.0%
AATGCAGAATGGAAATAGTA+TGG - chr2_3:56308093-56308112 Msa0300770:intron 30.0%
ATGCAGAATGGAAATAGTAT+GGG - chr2_3:56308094-56308113 Msa0300770:intron 30.0%
ATCTATACAACAGGACATTT+GGG - chr2_3:56308209-56308228 Msa0300770:intron 30.0%
! CATTTGGGATTTGAATTTGT+TGG - chr2_3:56308224-56308243 Msa0300770:intron 30.0%
! ATCTTTCTCAATTTTTGCCA+TGG - chr2_3:56308256-56308275 Msa0300770:intron 30.0%
! ATATTTTCATGCACACATGA+TGG + chr2_3:56308488-56308507 None:intergenic 30.0%
TTAAGAAATCAACGATGGAT+TGG - chr2_3:56308677-56308696 Msa0300770:intron 30.0%
CTCTTTATAAGTACAGACAA+TGG - chr2_3:56308737-56308756 Msa0300770:intron 30.0%
GAACTTGTGGATATAAATAG+AGG - chr2_3:56308823-56308842 Msa0300770:intron 30.0%
TGTGGATATAAATAGAGGTT+TGG - chr2_3:56308828-56308847 Msa0300770:intron 30.0%
! GATATAAATAGAGGTTTGGT+GGG - chr2_3:56308832-56308851 Msa0300770:intron 30.0%
GAGAAATTAGGGTTAGGAAT+TGG + chr2_3:56300289-56300308 None:intergenic 35.0%
TGAATCGAGAAATTAGGGTT+AGG + chr2_3:56300295-56300314 None:intergenic 35.0%
! GGTATTGAACTGTTAGGATT+AGG - chr2_3:56300602-56300621 Msa0300770:intron 35.0%
TCTGTTTATGTGCGAGTATA+TGG - chr2_3:56300767-56300786 Msa0300770:CDS 35.0%
GAATCATCTTAAAGTGACTG+TGG - chr2_3:56300860-56300879 Msa0300770:exon 35.0%
! GATGTGTGTTTTCTGATCTA+CGG - chr2_3:56301265-56301284 Msa0300770:five_prime_UTR 35.0%
CATAGAAATAGAATCGAACC+TGG + chr2_3:56301398-56301417 None:intergenic 35.0%
! TCTTTAGCAATTGTGTCACT+TGG - chr2_3:56301496-56301515 Msa0300770:intron 35.0%
TCAATGCTCACTATTGTTTG+CGG - chr2_3:56301577-56301596 Msa0300770:intron 35.0%
!! TAATCGTTTGGATGTTTTGG+GGG - chr2_3:56301734-56301753 Msa0300770:intron 35.0%
CTTGGTTGTGAAACAATTAG+TGG - chr2_3:56301760-56301779 Msa0300770:intron 35.0%
GTTGTGAAACAATTAGTGGT+GGG - chr2_3:56301764-56301783 Msa0300770:intron 35.0%
AAAGCCATAAACTAAAACCC+AGG + chr2_3:56301803-56301822 None:intergenic 35.0%
!!! GGCTTTGCTGTTTTTTAAGT+TGG - chr2_3:56301817-56301836 Msa0300770:intron 35.0%
!!! TTTTTTGTTGCCTGTTGTTG+AGG - chr2_3:56301918-56301937 Msa0300770:intron 35.0%
GAATAAAAATTGACAGGGAC+AGG + chr2_3:56302011-56302030 None:intergenic 35.0%
TGTAGCATGTAATCATGCAA+AGG - chr2_3:56302044-56302063 Msa0300770:intron 35.0%
TTACAACAAAATGAAGGGAG+TGG + chr2_3:56302192-56302211 None:intergenic 35.0%
ATAGAAAATAGGCATGTCTC+AGG + chr2_3:56302261-56302280 None:intergenic 35.0%
CAACCAATTACAGATACAAC+CGG + chr2_3:56302305-56302324 None:intergenic 35.0%
ATTGGTTGTAGATTTGTGTC+TGG - chr2_3:56302317-56302336 Msa0300770:five_prime_UTR 35.0%
ATGTCGATCTCCATATGATA+AGG - chr2_3:56302399-56302418 Msa0300770:five_prime_UTR 35.0%
TACTATACTAGCATCCTGTT+TGG - chr2_3:56302592-56302611 Msa0300770:five_prime_UTR 35.0%
CTATACATATAGAGCCTGTT+TGG + chr2_3:56302884-56302903 None:intergenic 35.0%
CAAACAGGCTCTATATGTAT+AGG - chr2_3:56302882-56302901 Msa0300770:five_prime_UTR 35.0%
GGCTCTATATGTATAGGATT+TGG - chr2_3:56302888-56302907 Msa0300770:five_prime_UTR 35.0%
TCAGTTATTATGGGCTTGAT+TGG - chr2_3:56302957-56302976 Msa0300770:five_prime_UTR 35.0%
ACCGTAAAGAAGTGAAAACA+TGG - chr2_3:56303102-56303121 Msa0300770:five_prime_UTR 35.0%
AATATCCTTGCTTAGATTGG+TGG - chr2_3:56303291-56303310 Msa0300770:five_prime_UTR 35.0%
ATGATTTCGACTTTGCTTTC+TGG + chr2_3:56303348-56303367 None:intergenic 35.0%
! CGGAATCTTGTTTACATAGT+GGG - chr2_3:56303409-56303428 Msa0300770:five_prime_UTR 35.0%
! AAATGGAAAGGCATAACTAC+TGG + chr2_3:56303487-56303506 None:intergenic 35.0%
ACTTAGAACAAGGGGAAAAA+TGG + chr2_3:56303504-56303523 None:intergenic 35.0%
!! ATTTTTCCCCTTGTTCTAAG+TGG - chr2_3:56303503-56303522 Msa0300770:five_prime_UTR 35.0%
AATCTTCCACTTAGAACAAG+GGG + chr2_3:56303512-56303531 None:intergenic 35.0%
!!! CGAGAGTATTTTGGTCAATA+TGG - chr2_3:56303569-56303588 Msa0300770:five_prime_UTR 35.0%
!!! GTATTTTGGTCAATATGGGA+AGG - chr2_3:56303574-56303593 Msa0300770:five_prime_UTR 35.0%
!! GCTTAGCTTTTCTTCATTAG+TGG - chr2_3:56303695-56303714 Msa0300770:intron 35.0%
ATGATGGTAGCCACTATAAT+GGG - chr2_3:56303751-56303770 Msa0300770:five_prime_UTR 35.0%
GTAGAAAAAGTTATCAGCCT+CGG - chr2_3:56303874-56303893 Msa0300770:intron 35.0%
! GTCCTTACTAGTTCTTCTAT+GGG - chr2_3:56304112-56304131 Msa0300770:intron 35.0%
CGAAATGGTTTGAATATGTG+TGG + chr2_3:56304144-56304163 None:intergenic 35.0%
! ATTTCGGACATTTTCACTGT+GGG - chr2_3:56304158-56304177 Msa0300770:intron 35.0%
!! TACAATTTTCGGGGAGAATT+GGG + chr2_3:56304189-56304208 None:intergenic 35.0%
!! ATACAATTTTCGGGGAGAAT+TGG + chr2_3:56304190-56304209 None:intergenic 35.0%
TTAAAAGTTGCAGCTCCTAA+AGG - chr2_3:56304292-56304311 Msa0300770:intron 35.0%
AAACCAAAAACCCTTCCTTT+AGG + chr2_3:56304310-56304329 None:intergenic 35.0%
!! TTTTGGAGGATAGACCTTTA+AGG - chr2_3:56304395-56304414 Msa0300770:intron 35.0%
AGTGCACATTGATACCTTAA+AGG + chr2_3:56304412-56304431 None:intergenic 35.0%
TCAATCATCCCATACGTAAA+AGG + chr2_3:56304443-56304462 None:intergenic 35.0%
!! ATACATTTCAGGGCTTGTTT+TGG - chr2_3:56304503-56304522 Msa0300770:five_prime_UTR 35.0%
AAGTAGTTTCAGCATACACT+AGG - chr2_3:56304719-56304738 Msa0300770:intron 35.0%
! TCATATGTTGCAATTGGTTC+AGG - chr2_3:56304796-56304815 Msa0300770:five_prime_UTR 35.0%
TGAAATGCTTACATGACAAG+GGG + chr2_3:56304828-56304847 None:intergenic 35.0%
GTGAAATGCTTACATGACAA+GGG + chr2_3:56304829-56304848 None:intergenic 35.0%
TGTGAAATGCTTACATGACA+AGG + chr2_3:56304830-56304849 None:intergenic 35.0%
CATGATGACTCTGTCATAAA+AGG - chr2_3:56304982-56305001 Msa0300770:intron 35.0%
!!! GAAGGATTTTTTAGGGCAAT+TGG - chr2_3:56305005-56305024 Msa0300770:intron 35.0%
! CTCGTAATTTGTGCTTACAA+TGG - chr2_3:56305057-56305076 Msa0300770:intron 35.0%
!!! TTTTCTCTGTTTTTGGGTGT+TGG - chr2_3:56305289-56305308 Msa0300770:intron 35.0%
CAAAATATTGAATCGGCACA+GGG + chr2_3:56305332-56305351 None:intergenic 35.0%
ACAAAATATTGAATCGGCAC+AGG + chr2_3:56305333-56305352 None:intergenic 35.0%
!!! ACACAATTATTTTTGGCTCC+AGG + chr2_3:56305731-56305750 None:intergenic 35.0%
TGGAGCCAAAAATAATTGTG+TGG - chr2_3:56305730-56305749 Msa0300770:five_prime_UTR 35.0%
AAATAATTGTGTGGATGTCC+TGG - chr2_3:56305739-56305758 Msa0300770:five_prime_UTR 35.0%
GACGTCACAACAAATTCAAT+TGG - chr2_3:56305896-56305915 Msa0300770:intron 35.0%
GATTCAAAATTTGTCCAGTG+AGG - chr2_3:56305961-56305980 Msa0300770:intron 35.0%
TCTATTGACCTTGGTAGAAA+TGG - chr2_3:56305989-56306008 Msa0300770:intron 35.0%
TTAACCAATACATCATCAGG+AGG + chr2_3:56306055-56306074 None:intergenic 35.0%
GACTTAACCAATACATCATC+AGG + chr2_3:56306058-56306077 None:intergenic 35.0%
GTTAAGTCTATGCAATCTCA+AGG - chr2_3:56306070-56306089 Msa0300770:intron 35.0%
AGCCTCTATAGCAGATAATA+TGG - chr2_3:56306150-56306169 Msa0300770:intron 35.0%
GACCATATTATCTGCTATAG+AGG + chr2_3:56306155-56306174 None:intergenic 35.0%
ATCAGGTTATGTTGAAGTAG+AGG - chr2_3:56306228-56306247 Msa0300770:intron 35.0%
CCAGCATTTACAACATTACA+AGG + chr2_3:56306379-56306398 None:intergenic 35.0%
CCTTGTAATGTTGTAAATGC+TGG - chr2_3:56306376-56306395 Msa0300770:intron 35.0%
TTAGCCACAGATAACGAAAT+TGG - chr2_3:56306403-56306422 Msa0300770:intron 35.0%
TAGCCACAGATAACGAAATT+GGG - chr2_3:56306404-56306423 Msa0300770:intron 35.0%
AAACCCAATTTCGTTATCTG+TGG + chr2_3:56306410-56306429 None:intergenic 35.0%
! GGATCTAAAGCATTATGCAA+TGG - chr2_3:56306445-56306464 Msa0300770:intron 35.0%
! CAATGGCTATTCTGAGAAAT+TGG - chr2_3:56306462-56306481 Msa0300770:intron 35.0%
GAAAGGAATGATCATCACAT+TGG - chr2_3:56306517-56306536 Msa0300770:intron 35.0%
AAGTGATGCTGATACAGATA+AGG - chr2_3:56306570-56306589 Msa0300770:intron 35.0%
AGTGATGCTGATACAGATAA+GGG - chr2_3:56306571-56306590 Msa0300770:intron 35.0%
AGTATTGTCACCCCATAATT+TGG - chr2_3:56306651-56306670 Msa0300770:intron 35.0%
AACAACTTGGCCAAATTATG+GGG + chr2_3:56306664-56306683 None:intergenic 35.0%
!! GAAAGCACTGAAAATCAGAA+TGG - chr2_3:56306688-56306707 Msa0300770:intron 35.0%
! CACATCAAAAGCTTGGATTT+TGG + chr2_3:56306785-56306804 None:intergenic 35.0%
ATGGATTCACATCAAAAGCT+TGG + chr2_3:56306792-56306811 None:intergenic 35.0%
TTTGATGTGAATCCATCTCA+TGG - chr2_3:56306796-56306815 Msa0300770:five_prime_UTR 35.0%
!! CTGTTGTTTCTACGAAATCT+TGG + chr2_3:56306858-56306877 None:intergenic 35.0%
! GACTTTTCTTTGGACAAGAT+TGG - chr2_3:56306877-56306896 Msa0300770:intron 35.0%
GACAAGATTGGTATTGCAAA+TGG - chr2_3:56306889-56306908 Msa0300770:intron 35.0%
TCCTGCTACTAATAACATTG+AGG - chr2_3:56306915-56306934 Msa0300770:intron 35.0%
TCCTCAATGTTATTAGTAGC+AGG + chr2_3:56306919-56306938 None:intergenic 35.0%
GAATCTGAAAATATAGGCAG+TGG - chr2_3:56306937-56306956 Msa0300770:intron 35.0%
AGGAATACACTTTCACTAGT+GGG + chr2_3:56307214-56307233 None:intergenic 35.0%
!! CACAAATTTTGATGCTCTAC+AGG + chr2_3:56307251-56307270 None:intergenic 35.0%
TAAATCATCACGCAATTGGA+AGG + chr2_3:56307386-56307405 None:intergenic 35.0%
ACTGTAAATCATCACGCAAT+TGG + chr2_3:56307390-56307409 None:intergenic 35.0%
! TTTCATGTTTTCCAACTTGG+AGG + chr2_3:56307439-56307458 None:intergenic 35.0%
TTGGAACAGCTGAAAAATAG+AGG + chr2_3:56307469-56307488 None:intergenic 35.0%
TTTCTTCTCATGAGAGAATG+GGG - chr2_3:56307549-56307568 Msa0300770:intron 35.0%
!! GTTTATGGATCCTGCTATTT+TGG - chr2_3:56307757-56307776 Msa0300770:intron 35.0%
ATTTAACTGTGGGGAGTAAT+TGG + chr2_3:56307840-56307859 None:intergenic 35.0%
!!! GAAAATCGATGGTTTTGTTG+TGG + chr2_3:56307914-56307933 None:intergenic 35.0%
!!! AACCATCGATTTTCGGAAAT+TGG - chr2_3:56307920-56307939 Msa0300770:intron 35.0%
!!! ACCATCGATTTTCGGAAATT+GGG - chr2_3:56307921-56307940 Msa0300770:intron 35.0%
TCAATCTCAAGCCAGTAATT+TGG - chr2_3:56307994-56308013 Msa0300770:intron 35.0%
AGGAAATGATGCCAAATTAC+TGG + chr2_3:56308008-56308027 None:intergenic 35.0%
TTTGGCATCATTTCCTCAAT+TGG - chr2_3:56308012-56308031 Msa0300770:intron 35.0%
GAATGGAAATAGTATGGGTA+TGG - chr2_3:56308099-56308118 Msa0300770:intron 35.0%
!! CTTTTGAGAAACGAAAGACT+GGG - chr2_3:56308127-56308146 Msa0300770:intron 35.0%
!! TTTTGAGAAACGAAAGACTG+GGG - chr2_3:56308128-56308147 Msa0300770:intron 35.0%
GGGTTTAGTAAGTTTCATAG+AGG - chr2_3:56308148-56308167 Msa0300770:intron 35.0%
TTGTATAGATCCCCAGAATT+CGG + chr2_3:56308199-56308218 None:intergenic 35.0%
GATCTATACAACAGGACATT+TGG - chr2_3:56308208-56308227 Msa0300770:intron 35.0%
AATCTTTCCAGCATTGCTAA+AGG - chr2_3:56308318-56308337 Msa0300770:intron 35.0%
! TCTCGACATGATTTGTCTAA+TGG - chr2_3:56308354-56308373 Msa0300770:intron 35.0%
!! TTTGTCTAATGGACTACCTA+TGG - chr2_3:56308365-56308384 Msa0300770:intron 35.0%
TACTCGAAGAAAACTGTAAC+TGG - chr2_3:56308397-56308416 Msa0300770:intron 35.0%
GGGAATTAAGAAATCAACGA+TGG - chr2_3:56308672-56308691 Msa0300770:intron 35.0%
ATAAAGAGAACACTCGACTA+AGG + chr2_3:56308725-56308744 None:intergenic 35.0%
GGATATAAATAGAGGTTTGG+TGG - chr2_3:56308831-56308850 Msa0300770:intron 35.0%
! GTTTGGTGGGAATAATTCAA+TGG - chr2_3:56308845-56308864 Msa0300770:intron 35.0%
TGTAAAACCCTATTGTCACT+TGG - chr2_3:56308957-56308976 Msa0300770:five_prime_UTR 35.0%
! GTAAAACCCTATTGTCACTT+GGG - chr2_3:56308958-56308977 Msa0300770:five_prime_UTR 35.0%
!!! CACGAGGTGGCTTTTTTATA+AGG + chr2_3:56300154-56300173 None:intergenic 40.0%
AGCGAGAGAGCAAAACAAAA+GGG + chr2_3:56300188-56300207 None:intergenic 40.0%
TTAGGAATTGGAAGTGGATG+AGG + chr2_3:56300277-56300296 None:intergenic 40.0%
TTAGGGTTAGGAATTGGAAG+TGG + chr2_3:56300283-56300302 None:intergenic 40.0%
CAGAACATAAAATCGCACGA+TGG + chr2_3:56300731-56300750 None:intergenic 40.0%
TTCATCACTCATGATTGCTC+TGG + chr2_3:56301298-56301317 None:intergenic 40.0%
AGAGCAATCATGAGTGATGA+AGG - chr2_3:56301297-56301316 Msa0300770:five_prime_UTR 40.0%
TCATGAGTGATGAAGGAGAA+AGG - chr2_3:56301304-56301323 Msa0300770:five_prime_UTR 40.0%
CAATTGAGACCATGCAAATG+CGG - chr2_3:56301369-56301388 Msa0300770:five_prime_UTR 40.0%
!!! TGGATGCTGTGTGTTTTTTG+AGG - chr2_3:56301462-56301481 Msa0300770:five_prime_UTR 40.0%
CAATGCTCACTATTGTTTGC+GGG - chr2_3:56301578-56301597 Msa0300770:intron 40.0%
CTGTCAAACCAATTGGTCAT+AGG - chr2_3:56301625-56301644 Msa0300770:five_prime_UTR 40.0%
! TCTAGGATCCTATGACCAAT+TGG + chr2_3:56301636-56301655 None:intergenic 40.0%
AATTGGTCATAGGATCCTAG+AGG - chr2_3:56301635-56301654 Msa0300770:five_prime_UTR 40.0%
TTGGGTTATATGAATCCAGG+CGG + chr2_3:56301698-56301717 None:intergenic 40.0%
GGTTGTGAAACAATTAGTGG+TGG - chr2_3:56301763-56301782 Msa0300770:intron 40.0%
!!! GTGTCCTGGGTTTTAGTTTA+TGG - chr2_3:56301796-56301815 Msa0300770:intron 40.0%
!! TATTTCTTGCTGTTTCAGGC+AGG - chr2_3:56301888-56301907 Msa0300770:intron 40.0%
CTCTTACCAATCAGTGTACA+GGG + chr2_3:56302140-56302159 None:intergenic 40.0%
ACTCTTACCAATCAGTGTAC+AGG + chr2_3:56302141-56302160 None:intergenic 40.0%
! ATGCCGGTTGTATCTGTAAT+TGG - chr2_3:56302299-56302318 Msa0300770:five_prime_UTR 40.0%
TGTAGATTTGTGTCTGGTGT+TGG - chr2_3:56302323-56302342 Msa0300770:five_prime_UTR 40.0%
!! TTGGCATCACATAATGGACA+TGG - chr2_3:56302342-56302361 Msa0300770:five_prime_UTR 40.0%
TAAGGAAAAGATTGTCGGGA+TGG - chr2_3:56302417-56302436 Msa0300770:five_prime_UTR 40.0%
TCAAACAAGCCAATCCAAAC+AGG - chr2_3:56302867-56302886 Msa0300770:five_prime_UTR 40.0%
CATATAGAGCCTGTTTGGAT+TGG + chr2_3:56302879-56302898 None:intergenic 40.0%
AGCAAGGATATTATCGGTGA+GGG + chr2_3:56303283-56303302 None:intergenic 40.0%
AAGCAAGGATATTATCGGTG+AGG + chr2_3:56303284-56303303 None:intergenic 40.0%
! ATTGGTGGCTGAAGTTCATA+TGG - chr2_3:56303306-56303325 Msa0300770:five_prime_UTR 40.0%
GCAAAGTCGAAATCATCTGA+TGG - chr2_3:56303352-56303371 Msa0300770:five_prime_UTR 40.0%
AGTCGAAATCATCTGATGGA+CGG - chr2_3:56303356-56303375 Msa0300770:five_prime_UTR 40.0%
TCAGCAATGTGCGAGTTATT+CGG - chr2_3:56303386-56303405 Msa0300770:five_prime_UTR 40.0%
! GCGGAATCTTGTTTACATAG+TGG - chr2_3:56303408-56303427 Msa0300770:five_prime_UTR 40.0%
GAACAAGGGGAAAAATGGAA+AGG + chr2_3:56303499-56303518 None:intergenic 40.0%
CATGATTGTCATAACAGCCA+TGG - chr2_3:56303727-56303746 Msa0300770:five_prime_UTR 40.0%
CATGATGGTAGCCACTATAA+TGG - chr2_3:56303750-56303769 Msa0300770:five_prime_UTR 40.0%
GCCAGTTTATCAACTCAGTT+GGG - chr2_3:56303896-56303915 Msa0300770:intron 40.0%
CCAGTTTATCAACTCAGTTG+GGG - chr2_3:56303897-56303916 Msa0300770:intron 40.0%
AGTAAGGACGATTGACAAGA+TGG + chr2_3:56304101-56304120 None:intergenic 40.0%
! CGTCCTTACTAGTTCTTCTA+TGG - chr2_3:56304111-56304130 Msa0300770:intron 40.0%
GACCCATAGAAGAACTAGTA+AGG + chr2_3:56304117-56304136 None:intergenic 40.0%
CACAGTGAAAATGTCCGAAA+TGG + chr2_3:56304159-56304178 None:intergenic 40.0%
! CATTTCGGACATTTTCACTG+TGG - chr2_3:56304157-56304176 Msa0300770:intron 40.0%
AGTATGAGGGATGATTACGA+GGG + chr2_3:56304268-56304287 None:intergenic 40.0%
AAGTATGAGGGATGATTACG+AGG + chr2_3:56304269-56304288 None:intergenic 40.0%
!!! TGTACATGGGTTTGTTTTGG+AGG - chr2_3:56304381-56304400 Msa0300770:intron 40.0%
! GTATCAATGTGCACTTGTTG+AGG - chr2_3:56304417-56304436 Msa0300770:intron 40.0%
! TTGTTGAGGCCTTTTACGTA+TGG - chr2_3:56304431-56304450 Msa0300770:intron 40.0%
! TGTTGAGGCCTTTTACGTAT+GGG - chr2_3:56304432-56304451 Msa0300770:intron 40.0%
AACTGATAAGCAAGAACCAG+AGG + chr2_3:56304466-56304485 None:intergenic 40.0%
TGACTCTGTCATAAAAGGGA+AGG - chr2_3:56304987-56305006 Msa0300770:intron 40.0%
TTGCTTGTGCAATCATCCAA+AGG + chr2_3:56305188-56305207 None:intergenic 40.0%
ATTGCACAAGCAACACTTCA+GGG - chr2_3:56305195-56305214 Msa0300770:intron 40.0%
ACAGGGAATTGATGCTGTAA+CGG + chr2_3:56305315-56305334 None:intergenic 40.0%
TTTGCAGGAATTCCATTAGG+AGG + chr2_3:56305419-56305438 None:intergenic 40.0%
CTATATTACCATGCAGCATG+AGG + chr2_3:56305452-56305471 None:intergenic 40.0%
GCTGCATGGTAATATAGTGT+TGG - chr2_3:56305455-56305474 Msa0300770:intron 40.0%
! TCTGTGTTATTAGGGGTTTG+CGG - chr2_3:56305531-56305550 Msa0300770:five_prime_UTR 40.0%
TGCAGAGTGATACAATGAAG+AGG - chr2_3:56305672-56305691 Msa0300770:intron 40.0%
AACTGGGTGTTCAAATTCAC+AGG + chr2_3:56305809-56305828 None:intergenic 40.0%
GGCTAATGGTAAAGACAACT+GGG + chr2_3:56305825-56305844 None:intergenic 40.0%
TGGCTAATGGTAAAGACAAC+TGG + chr2_3:56305826-56305845 None:intergenic 40.0%
TTGATGTTGTACAACACCCT+CGG + chr2_3:56305859-56305878 None:intergenic 40.0%
!! CATTTTGGCCATTTCTACCA+AGG + chr2_3:56306000-56306019 None:intergenic 40.0%
! TCTCAATCTGAGATAGCATC+AGG - chr2_3:56306211-56306230 Msa0300770:intron 40.0%
! TATTATGACTTGCAACGCGA+GGG + chr2_3:56306330-56306349 None:intergenic 40.0%
! TTATTATGACTTGCAACGCG+AGG + chr2_3:56306331-56306350 None:intergenic 40.0%
! GCTTTAGATCCATGTAACAG+TGG + chr2_3:56306436-56306455 None:intergenic 40.0%
ATTCCAGGCATCAAATTCCA+TGG + chr2_3:56306626-56306645 None:intergenic 40.0%
TGACAATACTGAGTCATTCC+AGG + chr2_3:56306641-56306660 None:intergenic 40.0%
AGTGCTTTCGCTTAACAACT+TGG + chr2_3:56306677-56306696 None:intergenic 40.0%
CAGGAATACACTTTCACTAG+TGG + chr2_3:56307215-56307234 None:intergenic 40.0%
TACAGGCACTCTATTCAATC+AGG + chr2_3:56307234-56307253 None:intergenic 40.0%
!! GGCGCTGAAATTTGTGTTTT+TGG + chr2_3:56307488-56307507 None:intergenic 40.0%
TCATGAGAAGAAAAACCAGG+AGG + chr2_3:56307542-56307561 None:intergenic 40.0%
CTCTCATGAGAAGAAAAACC+AGG + chr2_3:56307545-56307564 None:intergenic 40.0%
GTACCTACTTCCTGCAATAT+TGG - chr2_3:56307618-56307637 Msa0300770:intron 40.0%
CAACCAATATTGCAGGAAGT+AGG + chr2_3:56307624-56307643 None:intergenic 40.0%
GCAATGAATTCCCTGTCAAA+AGG + chr2_3:56307661-56307680 None:intergenic 40.0%
TGCTTGACCCTTCTTTCTTA+TGG - chr2_3:56307678-56307697 Msa0300770:intron 40.0%
TCATATCAGACACCATCAAC+TGG - chr2_3:56307707-56307726 Msa0300770:intron 40.0%
CATATCAGACACCATCAACT+GGG - chr2_3:56307708-56307727 Msa0300770:intron 40.0%
! ACACCATCAACTGGGAATTT+TGG - chr2_3:56307716-56307735 Msa0300770:intron 40.0%
TGCTGGAGACATTGAGTTTA+TGG - chr2_3:56307742-56307761 Msa0300770:intron 40.0%
TTACCAACAGCCAAAATAGC+AGG + chr2_3:56307770-56307789 None:intergenic 40.0%
!!! TGCTATTTTGGCTGTTGGTA+AGG - chr2_3:56307769-56307788 Msa0300770:intron 40.0%
!!! GCTATTTTGGCTGTTGGTAA+GGG - chr2_3:56307770-56307789 Msa0300770:intron 40.0%
!!! CTATTTTGGCTGTTGGTAAG+GGG - chr2_3:56307771-56307790 Msa0300770:intron 40.0%
TGGATTGCATGTCTAGCATT+GGG + chr2_3:56307820-56307839 None:intergenic 40.0%
TTGGATTGCATGTCTAGCAT+TGG + chr2_3:56307821-56307840 None:intergenic 40.0%
TCCCAATTTCCGAAAATCGA+TGG + chr2_3:56307925-56307944 None:intergenic 40.0%
! AGAAATGCGGTCTTGTCAAA+TGG - chr2_3:56308049-56308068 Msa0300770:intron 40.0%
! GGTCTTGTCAAATGGCAATT+GGG - chr2_3:56308057-56308076 Msa0300770:intron 40.0%
TTGTCAAATGGCAATTGGGA+TGG - chr2_3:56308061-56308080 Msa0300770:intron 40.0%
TGTCAAATGGCAATTGGGAT+GGG - chr2_3:56308062-56308081 Msa0300770:intron 40.0%
!! GCTTTTGAGAAACGAAAGAC+TGG - chr2_3:56308126-56308145 Msa0300770:intron 40.0%
AAATACCAGATGCCGAATTC+TGG - chr2_3:56308184-56308203 Msa0300770:intron 40.0%
AATACCAGATGCCGAATTCT+GGG - chr2_3:56308185-56308204 Msa0300770:intron 40.0%
! ATTCTGGGGATCTATACAAC+AGG - chr2_3:56308200-56308219 Msa0300770:intron 40.0%
AGACACAGCTAAGACACAAA+TGG - chr2_3:56308287-56308306 Msa0300770:intron 40.0%
CCAGAACTACACGTAGAAAA+GGG + chr2_3:56308631-56308650 None:intergenic 40.0%
TCCAGAACTACACGTAGAAA+AGG + chr2_3:56308632-56308651 None:intergenic 40.0%
!! TCTACGTGTAGTTCTGGATT+TGG - chr2_3:56308634-56308653 Msa0300770:intron 40.0%
ACCTTTCCCAAGTGACAATA+GGG + chr2_3:56308967-56308986 None:intergenic 40.0%
AAGGGTAAGAGAATTGCACG+AGG + chr2_3:56300170-56300189 None:intergenic 45.0%
GAGCGAGAGAGCAAAACAAA+AGG + chr2_3:56300189-56300208 None:intergenic 45.0%
GGGAAGAATACGAAACTGTG+AGG + chr2_3:56300230-56300249 None:intergenic 45.0%
! ACTTACAGTGGTGGTGAGAT+CGG + chr2_3:56300251-56300270 None:intergenic 45.0%
ATGAGGAAGACTTACAGTGG+TGG + chr2_3:56300260-56300279 None:intergenic 45.0%
TGGATGAGGAAGACTTACAG+TGG + chr2_3:56300263-56300282 None:intergenic 45.0%
!! ATTGTTGGTTCACCGAGTGT+AGG - chr2_3:56301137-56301156 Msa0300770:five_prime_UTR 45.0%
TCCTCTTTGTGCTGAAGAGA+TGG - chr2_3:56301332-56301351 Msa0300770:five_prime_UTR 45.0%
TCCATCTCTTCAGCACAAAG+AGG + chr2_3:56301336-56301355 None:intergenic 45.0%
!!! TGGATGTTTTGGGGGTAACT+TGG - chr2_3:56301742-56301761 Msa0300770:intron 45.0%
TGGGATCTATCATGTGTCCT+GGG - chr2_3:56301783-56301802 Msa0300770:intron 45.0%
AACAAGGAAGCCTCAACAAC+AGG + chr2_3:56301931-56301950 None:intergenic 45.0%
AAAATTGACAGGGACAGGGA+GGG + chr2_3:56302006-56302025 None:intergenic 45.0%
AAAAATTGACAGGGACAGGG+AGG + chr2_3:56302007-56302026 None:intergenic 45.0%
TGGTTACCCTGTACACTGAT+TGG - chr2_3:56302131-56302150 Msa0300770:intron 45.0%
TCATGAGCAATGAGGAATGC+CGG - chr2_3:56302283-56302302 Msa0300770:five_prime_UTR 45.0%
!! CTGGTGTTGGCATCACATAA+TGG - chr2_3:56302336-56302355 Msa0300770:five_prime_UTR 45.0%
!! CATAATGGACATGGCTGAGA+AGG - chr2_3:56302351-56302370 Msa0300770:five_prime_UTR 45.0%
CATATGGAGATCGACATGCA+GGG + chr2_3:56302396-56302415 None:intergenic 45.0%
TCATATGGAGATCGACATGC+AGG + chr2_3:56302397-56302416 None:intergenic 45.0%
TTCAGCCACCAATCTAAGCA+AGG + chr2_3:56303299-56303318 None:intergenic 45.0%
TCATAACAGCCATGGCATGA+TGG - chr2_3:56303735-56303754 Msa0300770:five_prime_UTR 45.0%
CTCTGCTATGCCCATTATAG+TGG + chr2_3:56303764-56303783 None:intergenic 45.0%
! GATTGCAATGGGTTTCAGAG+AGG + chr2_3:56303852-56303871 None:intergenic 45.0%
GGCCAGTTTATCAACTCAGT+TGG - chr2_3:56303895-56303914 Msa0300770:intron 45.0%
!! CCCCAACTGAGTTGATAAAC+TGG + chr2_3:56303900-56303919 None:intergenic 45.0%
AAGTTGCAGCTCCTAAAGGA+AGG - chr2_3:56304296-56304315 Msa0300770:intron 45.0%
AGTTGCAGCTCCTAAAGGAA+GGG - chr2_3:56304297-56304316 Msa0300770:intron 45.0%
! GCTCCTAAAGGAAGGGTTTT+TGG - chr2_3:56304304-56304323 Msa0300770:intron 45.0%
TCATGCATGGCTCAGAAACA+TGG - chr2_3:56304541-56304560 Msa0300770:intron 45.0%
ACACAATCTGGATTGCTGCA+AGG + chr2_3:56304652-56304671 None:intergenic 45.0%
TACTGGCGCTGTAACCAATA+TGG - chr2_3:56305133-56305152 Msa0300770:intron 45.0%
GCGCTGTAACCAATATGGAA+CGG - chr2_3:56305138-56305157 Msa0300770:intron 45.0%
CTGTAACCAATATGGAACGG+CGG - chr2_3:56305141-56305160 Msa0300770:intron 45.0%
GAATGTATTGCCTCCTCCTT+TGG - chr2_3:56305169-56305188 Msa0300770:intron 45.0%
CTTGTGCAATCATCCAAAGG+AGG + chr2_3:56305185-56305204 None:intergenic 45.0%
GATTGCACAAGCAACACTTC+AGG - chr2_3:56305194-56305213 Msa0300770:intron 45.0%
AACTCTGTTAGCACTGCAAG+AGG - chr2_3:56305389-56305408 Msa0300770:intron 45.0%
GGCTTTGCAGGAATTCCATT+AGG + chr2_3:56305422-56305441 None:intergenic 45.0%
TGGAATTCCTGCAAAGCCTA+TGG - chr2_3:56305424-56305443 Msa0300770:intron 45.0%
! CTGTGTTATTAGGGGTTTGC+GGG - chr2_3:56305532-56305551 Msa0300770:five_prime_UTR 45.0%
! CTGCTGATTGAATCAGGCTT+GGG + chr2_3:56305605-56305624 None:intergenic 45.0%
!! AGAGTGCTGCTGATTGAATC+AGG + chr2_3:56305611-56305630 None:intergenic 45.0%
AAGAGGCCTTTGTCAAGTGA+TGG - chr2_3:56305689-56305708 Msa0300770:intron 45.0%
AGAGGCCTTTGTCAAGTGAT+GGG - chr2_3:56305690-56305709 Msa0300770:intron 45.0%
GTGTTCAAATTCACAGGAGC+AGG + chr2_3:56305803-56305822 None:intergenic 45.0%
! TCAATTGGCAGCTTTAGTCG+TGG - chr2_3:56305911-56305930 Msa0300770:intron 45.0%
GTCAATAGAAGACACCTCAC+TGG + chr2_3:56305978-56305997 None:intergenic 45.0%
! GAGGTGTCTTCTATTGACCT+TGG - chr2_3:56305980-56305999 Msa0300770:intron 45.0%
CCAATACATCATCAGGAGGT+GGG + chr2_3:56306051-56306070 None:intergenic 45.0%
ACCAATACATCATCAGGAGG+TGG + chr2_3:56306052-56306071 None:intergenic 45.0%
AATACTCATCCTGTGTCGCA+TGG - chr2_3:56306349-56306368 Msa0300770:intron 45.0%
GGGTTTCAACCACTGTTACA+TGG - chr2_3:56306424-56306443 Msa0300770:intron 45.0%
!! ACAGGTTGGTTCGTGATGAA+AGG - chr2_3:56306500-56306519 Msa0300770:intron 45.0%
TGTCCATGGAATTTGATGCC+TGG - chr2_3:56306620-56306639 Msa0300770:intron 45.0%
! TGTTGGTTAGCACCATGAGA+TGG + chr2_3:56306811-56306830 None:intergenic 45.0%
! ACACTTTCACTAGTGGGCAT+GGG + chr2_3:56307208-56307227 None:intergenic 45.0%
! TACACTTTCACTAGTGGGCA+TGG + chr2_3:56307209-56307228 None:intergenic 45.0%
AGTAGAAAGGTCAACTGGTC+TGG - chr2_3:56307331-56307350 Msa0300770:intron 45.0%
TGCTTGGAGCTGAAAATCCT+GGG + chr2_3:56307511-56307530 None:intergenic 45.0%
TGAGAAGAAAAACCAGGAGG+TGG + chr2_3:56307539-56307558 None:intergenic 45.0%
!! CAGGCTTTTGACTCAACTTC+TGG - chr2_3:56307572-56307591 Msa0300770:intron 45.0%
CCACCAAAATTCCCAGTTGA+TGG + chr2_3:56307722-56307741 None:intergenic 45.0%
! CCATCAACTGGGAATTTTGG+TGG - chr2_3:56307719-56307738 Msa0300770:intron 45.0%
!!! GATCCTGCTATTTTGGCTGT+TGG - chr2_3:56307764-56307783 Msa0300770:intron 45.0%
TCTCCAGCAGTCTAGAAATG+CGG - chr2_3:56308036-56308055 Msa0300770:intron 45.0%
! CGGTCTTGTCAAATGGCAAT+TGG - chr2_3:56308056-56308075 Msa0300770:intron 45.0%
GGGTGGAATGAAATGCAGAA+TGG - chr2_3:56308082-56308101 Msa0300770:intron 45.0%
ATACCAGATGCCGAATTCTG+GGG - chr2_3:56308186-56308205 Msa0300770:intron 45.0%
CTTTCCAGCATTGCTAAAGG+TGG - chr2_3:56308321-56308340 Msa0300770:intron 45.0%
TCGAGTATCATCGTAGCCAT+AGG + chr2_3:56308384-56308403 None:intergenic 45.0%
GAACTACACGTAGAAAAGGG+AGG + chr2_3:56308628-56308647 None:intergenic 45.0%
! CCCTTTTCTACGTGTAGTTC+TGG - chr2_3:56308628-56308647 Msa0300770:intron 45.0%
! ACCCTATTGTCACTTGGGAA+AGG - chr2_3:56308963-56308982 Msa0300770:five_prime_UTR 45.0%
GACCTTTCCCAAGTGACAAT+AGG + chr2_3:56308968-56308987 None:intergenic 45.0%
!! TTTATTAATTTATTATGATT+TGG - chr2_3:56304759-56304778 Msa0300770:five_prime_UTR 5.0%
GGTAAGAGAATTGCACGAGG+TGG + chr2_3:56300167-56300186 None:intergenic 50.0%
! CTTACAGTGGTGGTGAGATC+GGG + chr2_3:56300250-56300269 None:intergenic 50.0%
TGGTCATAGGATCCTAGAGG+TGG - chr2_3:56301638-56301657 Msa0300770:five_prime_UTR 50.0%
GCTAACTCCAAGGTTTGAGC+TGG + chr2_3:56301665-56301684 None:intergenic 50.0%
GTGGGATCTATCATGTGTCC+TGG - chr2_3:56301782-56301801 Msa0300770:intron 50.0%
GCAATGTGCGAGTTATTCGG+CGG - chr2_3:56303389-56303408 Msa0300770:five_prime_UTR 50.0%
TCTTCATCAGCCAGATCGAG+AGG + chr2_3:56303439-56303458 None:intergenic 50.0%
CATTCATGCAGCTTCTCCAG+CGG - chr2_3:56303546-56303565 Msa0300770:five_prime_UTR 50.0%
TAGTGGCTACCATCATGCCA+TGG + chr2_3:56303747-56303766 None:intergenic 50.0%
TGGCGACTCCTGAAAGTTAG+CGG - chr2_3:56303791-56303810 Msa0300770:intron 50.0%
! GAGTAGTGCCGCTAACTTTC+AGG + chr2_3:56303802-56303821 None:intergenic 50.0%
!! CTGAGTTGATAAACTGGCCG+AGG + chr2_3:56303894-56303913 None:intergenic 50.0%
CGTATGGGATGATTGACCTC+TGG - chr2_3:56304447-56304466 Msa0300770:five_prime_UTR 50.0%
GTGCAATCATCCAAAGGAGG+AGG + chr2_3:56305182-56305201 None:intergenic 50.0%
GCAAGAGGTTTGCCTCCTAA+TGG - chr2_3:56305404-56305423 Msa0300770:intron 50.0%
ACAAATTGTCAGCCAGCTGC+TGG - chr2_3:56305557-56305576 Msa0300770:five_prime_UTR 50.0%
GATTGAATCAGGCTTGGGCT+TGG + chr2_3:56305600-56305619 None:intergenic 50.0%
! GCTGCTGATTGAATCAGGCT+TGG + chr2_3:56305606-56305625 None:intergenic 50.0%
TGACGCCCATCACTTGACAA+AGG + chr2_3:56305698-56305717 None:intergenic 50.0%
GGGCGTCATAGTATAATGCC+TGG - chr2_3:56305710-56305729 Msa0300770:intron 50.0%
CGGCAACTATCTCTGGCTAA+TGG + chr2_3:56305839-56305858 None:intergenic 50.0%
TTAGCCAGAGATAGTTGCCG+AGG - chr2_3:56305839-56305858 Msa0300770:five_prime_UTR 50.0%
TAGCCAGAGATAGTTGCCGA+GGG - chr2_3:56305840-56305859 Msa0300770:five_prime_UTR 50.0%
! CCCACCTCCTGATGATGTAT+TGG - chr2_3:56306048-56306067 Msa0300770:intron 50.0%
ACGCGAGGGAAAGATGAGTT+GGG + chr2_3:56306316-56306335 None:intergenic 50.0%
AACGCGAGGGAAAGATGAGT+TGG + chr2_3:56306317-56306336 None:intergenic 50.0%
ACGAACCAACCTGTAAGAGC+TGG + chr2_3:56306494-56306513 None:intergenic 50.0%
CTTGGAGCTGAAAATCCTGG+GGG + chr2_3:56307509-56307528 None:intergenic 50.0%
GCTTGGAGCTGAAAATCCTG+GGG + chr2_3:56307510-56307529 None:intergenic 50.0%
CTGCTTGGAGCTGAAAATCC+TGG + chr2_3:56307512-56307531 None:intergenic 50.0%
! CAGGATTTTCAGCTCCAAGC+AGG - chr2_3:56307510-56307529 Msa0300770:intron 50.0%
GAAGAAAAACCAGGAGGTGG+TGG + chr2_3:56307536-56307555 None:intergenic 50.0%
TTCTCATGAGAGAATGGGGC+AGG - chr2_3:56307553-56307572 Msa0300770:intron 50.0%
!!! ACTGGGAATTTTGGTGGTGC+TGG - chr2_3:56307725-56307744 Msa0300770:intron 50.0%
!! TTTTGGCTGTTGGTAAGGGG+AGG - chr2_3:56307774-56307793 Msa0300770:intron 50.0%
! AGACCGCATTTCTAGACTGC+TGG + chr2_3:56308042-56308061 None:intergenic 50.0%
CAAATGGCAATTGGGATGGG+TGG - chr2_3:56308065-56308084 Msa0300770:intron 50.0%
!! GCTGTGTCTTAGCTTTGCCA+TGG + chr2_3:56308276-56308295 None:intergenic 50.0%
TCGACCACCTTTAGCAATGC+TGG + chr2_3:56308328-56308347 None:intergenic 50.0%
ATTGCTAAAGGTGGTCGAGC+TGG - chr2_3:56308330-56308349 Msa0300770:intron 50.0%
! ATTTGGTGAAGCAAGCTGCG+TGG - chr2_3:56308651-56308670 Msa0300770:intron 50.0%
TTTGGTGAAGCAAGCTGCGT+GGG - chr2_3:56308652-56308671 Msa0300770:intron 50.0%
ACCATGCAAATGCGGCTACC+AGG - chr2_3:56301377-56301396 Msa0300770:five_prime_UTR 55.0%
ACCTGGTAGCCGCATTTGCA+TGG + chr2_3:56301381-56301400 None:intergenic 55.0%
GTTTGAGCTGGACCACCTCT+AGG + chr2_3:56301653-56301672 None:intergenic 55.0%
AGGTGGTCCAGCTCAAACCT+TGG - chr2_3:56301655-56301674 Msa0300770:five_prime_UTR 55.0%
CTTGCGCTTGGCTAACTCCA+AGG + chr2_3:56301675-56301694 None:intergenic 55.0%
GCTGAGAAGGACGACACAGA+GGG - chr2_3:56302364-56302383 Msa0300770:five_prime_UTR 55.0%
AGAAGGACGACACAGAGGGA+CGG - chr2_3:56302368-56302387 Msa0300770:five_prime_UTR 55.0%
GGATGGCTGCAAACTGTGAG+AGG - chr2_3:56302434-56302453 Msa0300770:five_prime_UTR 55.0%
AGTGGGATTGCCTCTCGATC+TGG - chr2_3:56303426-56303445 Msa0300770:five_prime_UTR 55.0%
!!! CTCCAGCGGCGAGAGTATTT+TGG - chr2_3:56303560-56303579 Msa0300770:five_prime_UTR 55.0%
GACCAAAATACTCTCGCCGC+TGG + chr2_3:56303565-56303584 None:intergenic 55.0%
TCAATGTCTCGAACGGCAGC+TGG - chr2_3:56303608-56303627 Msa0300770:five_prime_UTR 55.0%
GGGCATAGCAGAGTTGCTCT+TGG - chr2_3:56303771-56303790 Msa0300770:intron 55.0%
ACCAATATGGAACGGCGGTC+AGG - chr2_3:56305146-56305165 Msa0300770:intron 55.0%
CCAATATGGAACGGCGGTCA+GGG - chr2_3:56305147-56305166 Msa0300770:intron 55.0%
TGAGGAGCCATAGGCTTTGC+AGG + chr2_3:56305434-56305453 None:intergenic 55.0%
CATGCAGCATGAGGAGCCAT+AGG + chr2_3:56305443-56305462 None:intergenic 55.0%
CTATGGCTCCTCATGCTGCA+TGG - chr2_3:56305441-56305460 Msa0300770:intron 55.0%
AATTGTCAGCCAGCTGCTGG+CGG - chr2_3:56305560-56305579 Msa0300770:five_prime_UTR 55.0%
TGTGTGGATGTCCTGGCGAA+CGG - chr2_3:56305746-56305765 Msa0300770:five_prime_UTR 55.0%
GAACGGGGGCGAAAAAACAC+TGG - chr2_3:56305763-56305782 Msa0300770:five_prime_UTR 55.0%
ACACCCTCGGCAACTATCTC+TGG + chr2_3:56305846-56305865 None:intergenic 55.0%
CAAGGTTCACCATGCGACAC+AGG + chr2_3:56306361-56306380 None:intergenic 55.0%
TGGACAGCACCAGCTCTTAC+AGG - chr2_3:56306482-56306501 Msa0300770:intron 55.0%
CAGCACCAGCTCTTACAGGT+TGG - chr2_3:56306486-56306505 Msa0300770:intron 55.0%
ACACAAATTTCAGCGCCCCC+AGG - chr2_3:56307491-56307510 Msa0300770:intron 55.0%
! GTTGGTAAGGGGAGGCTTCA+AGG - chr2_3:56307782-56307801 Msa0300770:five_prime_UTR 55.0%
GACTGCTGGAGAGCCAATTG+AGG + chr2_3:56308028-56308047 None:intergenic 55.0%
GATCCCCAGAATTCGGCATC+TGG + chr2_3:56308192-56308211 None:intergenic 55.0%
GGCTGAGAAGGACGACACAG+AGG - chr2_3:56302363-56302382 Msa0300770:five_prime_UTR 60.0%
CCCTGACCGCCGTTCCATAT+TGG + chr2_3:56305150-56305169 None:intergenic 60.0%
TTGGGCTTGGACAGTCCGGT+TGG + chr2_3:56305587-56305606 None:intergenic 60.0%
AGGCTTGGGCTTGGACAGTC+CGG + chr2_3:56305591-56305610 None:intergenic 60.0%
AACTGTGCCTCCAACAGCCG+AGG + chr2_3:56305642-56305661 None:intergenic 60.0%
GTGTGGATGTCCTGGCGAAC+GGG - chr2_3:56305747-56305766 Msa0300770:five_prime_UTR 60.0%
TGTGGATGTCCTGGCGAACG+GGG - chr2_3:56305748-56305767 Msa0300770:five_prime_UTR 60.0%
!!! TTTTTTCGCCCCCGTTCGCC+AGG + chr2_3:56305760-56305779 None:intergenic 60.0%
!! AGGAGGTGGGCTGCTAGGTT+TGG + chr2_3:56306038-56306057 None:intergenic 60.0%
!! TCATCAGGAGGTGGGCTGCT+AGG + chr2_3:56306043-56306062 None:intergenic 60.0%
TTAGCCAAGCGCAAGCCGCC+TGG - chr2_3:56301680-56301699 Msa0300770:intron 65.0%
GAATCCAGGCGGCTTGCGCT+TGG + chr2_3:56301687-56301706 None:intergenic 65.0%
GTGGATGTCCTGGCGAACGG+GGG - chr2_3:56305749-56305768 Msa0300770:five_prime_UTR 65.0%
CCAGCTGCTGGCGGTCCAAC+CGG - chr2_3:56305569-56305588 Msa0300770:five_prime_UTR 70.0%
! CCAGGAGGTGGTGGCCTGCT+TGG + chr2_3:56307527-56307546 None:intergenic 70.0%
CCAAGCAGGCCACCACCTCC+TGG - chr2_3:56307524-56307543 Msa0300770:intron 70.0%
CCGGTTGGACCGCCAGCAGC+TGG + chr2_3:56305572-56305591 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 56300138 56309035 56300138 ID=Msa0300770;Name=Msa0300770
chr2_3 mRNA 56300138 56309035 56300138 ID=Msa0300770-mRNA-1;Parent=Msa0300770;Name=Msa0300770-mRNA-1;_AED=0.06;_eAED=0.06;_QI=3247|1|1|1|0.84|0.78|14|315|62
chr2_3 exon 56300138 56300528 56300138 ID=Msa0300770-mRNA-1:exon:18067;Parent=Msa0300770-mRNA-1
chr2_3 exon 56300755 56301504 56300755 ID=Msa0300770-mRNA-1:exon:18066;Parent=Msa0300770-mRNA-1
chr2_3 exon 56301580 56301693 56301580 ID=Msa0300770-mRNA-1:exon:18065;Parent=Msa0300770-mRNA-1
chr2_3 exon 56302182 56303629 56302182 ID=Msa0300770-mRNA-1:exon:18064;Parent=Msa0300770-mRNA-1
chr2_3 exon 56303711 56303784 56303711 ID=Msa0300770-mRNA-1:exon:18063;Parent=Msa0300770-mRNA-1
chr2_3 exon 56303929 56304058 56303929 ID=Msa0300770-mRNA-1:exon:18062;Parent=Msa0300770-mRNA-1
chr2_3 exon 56304433 56304524 56304433 ID=Msa0300770-mRNA-1:exon:18061;Parent=Msa0300770-mRNA-1
chr2_3 exon 56304611 56304659 56304611 ID=Msa0300770-mRNA-1:exon:18060;Parent=Msa0300770-mRNA-1
chr2_3 exon 56304757 56304840 56304757 ID=Msa0300770-mRNA-1:exon:18059;Parent=Msa0300770-mRNA-1
chr2_3 exon 56305507 56305616 56305507 ID=Msa0300770-mRNA-1:exon:18058;Parent=Msa0300770-mRNA-1
chr2_3 exon 56305714 56305867 56305714 ID=Msa0300770-mRNA-1:exon:18057;Parent=Msa0300770-mRNA-1
chr2_3 exon 56306718 56306845 56306718 ID=Msa0300770-mRNA-1:exon:18056;Parent=Msa0300770-mRNA-1
chr2_3 exon 56307775 56307874 56307775 ID=Msa0300770-mRNA-1:exon:18055;Parent=Msa0300770-mRNA-1
chr2_3 exon 56308909 56309035 56308909 ID=Msa0300770-mRNA-1:exon:18054;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56308909 56309035 56308909 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56307775 56307874 56307775 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56306718 56306845 56306718 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56305714 56305867 56305714 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56305507 56305616 56305507 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56304757 56304840 56304757 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56304611 56304659 56304611 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56304433 56304524 56304433 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56303929 56304058 56303929 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56303711 56303784 56303711 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56302182 56303629 56302182 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56301580 56301693 56301580 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 five_prime_UTR 56300868 56301504 56300868 ID=Msa0300770-mRNA-1:five_prime_utr;Parent=Msa0300770-mRNA-1
chr2_3 CDS 56300755 56300867 56300755 ID=Msa0300770-mRNA-1:cds;Parent=Msa0300770-mRNA-1
chr2_3 CDS 56300453 56300528 56300453 ID=Msa0300770-mRNA-1:cds;Parent=Msa0300770-mRNA-1
chr2_3 three_prime_UTR 56300138 56300452 56300138 ID=Msa0300770-mRNA-1:three_prime_utr;Parent=Msa0300770-mRNA-1
Gene Sequence

>Msa0300770

ATGGAAAAGCTCAATCTTTCCAGCATTGCTAAAGGTGGTCGAGCTGGCTCTCGACATGATTTGTCTAATGGACTACCTATGGCTACGATGATACTCGAAGAAAACTGTAACTGTTCTGGATTTGGTGAAGCAAGCTGCGTGGGAATTAAGAAATCAACGATGGATTGGAACAAGATCATTAGCACATAG
Protein sequence

>Msa0300770

MEKLNLSSIAKGGRAGSRHDLSNGLPMATMILEENCNCSGFGEASCVGIKKSTMDWNKIIST*