AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0303290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0303290 MtrunA17_Chr2g0330191 84.424 642 54 5 1 603 60 694 0.0 1098
Msa0303290 MtrunA17_Chr8g0372421 33.136 338 176 11 5 331 38 336 4.15e-38 150
Msa0303290 MtrunA17_Chr1g0155701 32.425 367 195 11 5 357 39 366 8.04e-38 149
Msa0303290 MtrunA17_Chr8g0342001 32.884 371 198 12 5 362 35 367 1.50e-37 149
Msa0303290 MtrunA17_Chr2g0330291 32.181 376 194 11 5 362 38 370 2.66e-37 148
Msa0303290 MtrunA17_Chr2g0301001 31.657 338 181 13 5 331 37 335 1.86e-36 145
Msa0303290 MtrunA17_Chr5g0404841 31.953 338 180 10 5 331 36 334 4.31e-36 144
Msa0303290 MtrunA17_Chr3g0077531 31.157 337 184 10 5 331 36 334 6.49e-36 143
Msa0303290 MtrunA17_Chr3g0142001 32.055 365 199 12 5 357 38 365 1.95e-35 142
Msa0303290 MtrunA17_Chr1g0152571 32.537 335 182 10 5 331 41 339 1.58e-34 139
Msa0303290 MtrunA17_Chr5g0406921 31.503 346 171 13 5 331 38 336 2.88e-34 139
Msa0303290 MtrunA17_Chr2g0326481 31.548 336 184 9 5 331 32 330 3.85e-34 138
Msa0303290 MtrunA17_Chr4g0029301 30.423 355 194 11 5 345 36 351 3.75e-33 135
Msa0303290 MtrunA17_Chr2g0299161 30.081 369 209 11 5 361 38 369 5.18e-33 134
Msa0303290 MtrunA17_Chr8g0378221 31.487 343 171 11 5 329 60 356 7.88e-33 134
Msa0303290 MtrunA17_Chr5g0408371 29.745 353 190 11 5 337 38 352 8.12e-33 134
Msa0303290 MtrunA17_Chr2g0326491 32.407 324 171 10 5 318 32 317 5.36e-31 127
Msa0303290 MtrunA17_Chr4g0037031 28.244 393 222 12 5 378 46 397 4.92e-30 125
Msa0303290 MtrunA17_Chr3g0145581 27.990 393 215 11 5 374 45 392 1.69e-29 124
Msa0303290 MtrunA17_Chr2g0326441 40.351 171 94 4 5 168 32 201 1.31e-28 116
Msa0303290 MtrunA17_Chr3g0124931 25.285 526 290 18 11 509 42 491 4.48e-28 119
Msa0303290 MtrunA17_Chr3g0130721 29.226 349 190 9 5 338 37 343 1.29e-27 118
Msa0303290 MtrunA17_Chr3g0130711 28.615 325 182 10 5 318 37 322 2.41e-22 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0303290 AT1G72990.1 57.453 644 216 5 2 603 70 697 0.0 754
Msa0303290 AT1G72990.4 57.453 644 216 5 2 603 70 697 0.0 754
Msa0303290 AT1G72990.3 57.453 644 216 5 2 603 15 642 0.0 753
Msa0303290 AT1G72990.2 56.230 626 216 5 20 603 26 635 0.0 714
Msa0303290 AT4G36360.2 33.918 342 168 10 5 331 43 341 2.53e-37 149
Msa0303290 AT4G36360.1 33.918 342 168 10 5 331 43 341 2.56e-37 149
Msa0303290 AT3G13750.1 32.432 370 201 10 5 362 44 376 6.63e-36 144
Msa0303290 AT4G26140.4 30.060 336 188 8 5 331 39 336 4.57e-35 140
Msa0303290 AT4G26140.5 30.060 336 188 8 5 331 39 336 4.57e-35 140
Msa0303290 AT4G26140.8 30.060 336 188 8 5 331 39 336 4.96e-35 140
Msa0303290 AT4G26140.6 30.060 336 188 8 5 331 39 336 1.10e-34 139
Msa0303290 AT4G26140.3 30.060 336 188 8 5 331 39 336 1.24e-34 139
Msa0303290 AT4G26140.2 30.060 336 188 8 5 331 39 336 1.24e-34 139
Msa0303290 AT4G26140.9 30.060 336 188 8 5 331 39 336 1.48e-34 139
Msa0303290 AT4G26140.7 30.060 336 188 8 5 331 39 336 1.90e-34 139
Msa0303290 AT4G26140.1 30.060 336 188 8 5 331 39 336 2.07e-34 139
Msa0303290 AT1G31740.1 29.942 344 179 12 5 331 32 330 6.49e-34 138
Msa0303290 AT5G20710.1 30.194 361 196 13 5 355 38 352 7.60e-34 138
Msa0303290 AT1G45130.1 30.914 372 182 12 11 357 47 368 1.27e-33 137
Msa0303290 AT3G52840.2 30.655 336 186 8 5 331 93 390 7.61e-33 135
Msa0303290 AT3G52840.1 30.655 336 186 8 5 331 39 336 9.52e-33 134
Msa0303290 AT2G28470.1 32.059 340 173 11 5 329 42 338 2.56e-32 133
Msa0303290 AT2G28470.3 32.059 340 173 11 5 329 42 338 2.56e-32 133
Msa0303290 AT2G28470.2 32.059 340 173 11 5 329 36 332 2.85e-32 133
Msa0303290 AT2G28470.4 32.059 340 173 11 5 329 36 332 2.85e-32 133
Msa0303290 AT2G28470.5 32.059 340 173 11 5 329 42 338 3.64e-32 132
Msa0303290 AT2G32810.1 32.143 336 176 11 6 329 49 344 4.06e-32 132
Msa0303290 AT2G32810.2 32.143 336 176 11 6 329 49 344 5.03e-32 132
Msa0303290 AT2G16730.1 31.902 326 185 8 11 331 60 353 7.76e-32 132
Msa0303290 AT4G35010.1 31.657 338 182 9 5 331 51 350 1.12e-31 131
Msa0303290 AT5G56870.1 30.357 336 187 9 5 331 39 336 1.15e-31 131
Msa0303290 AT5G63810.1 31.447 318 170 10 11 318 48 327 3.58e-29 123
Msa0303290 AT1G77410.1 29.377 337 191 9 5 331 35 334 1.30e-28 122
Msa0303290 AT4G38590.2 31.193 327 172 9 17 331 63 348 1.27e-27 119
Msa0303290 AT4G38590.1 31.132 318 168 8 26 331 2 280 1.30e-27 119
Msa0303290 AT5G63800.1 28.022 364 211 9 5 356 42 366 1.46e-27 118
Msa0303290 AT1G77410.3 28.947 342 191 10 5 331 35 339 1.13e-26 115

Find 179 sgRNAs with CRISPR-Local

Find 655 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCTGTCTTCTGTTTATC+TGG 0.148143 2_3:-60446964 Msa0303290:CDS
TATAGGAGAGGAACAAATTT+TGG 0.185723 2_3:+60452216 None:intergenic
AACATGGGTCGTGTAAATTA+TGG 0.218923 2_3:-60447087 Msa0303290:CDS
GGATCAGATGATCTTGGTTT+TGG 0.260886 2_3:+60452857 None:intergenic
GACATACACACCACAATCTT+TGG 0.274241 2_3:+60445762 None:intergenic
CACTGGGTGGCTTACACATT+GGG 0.274315 2_3:-60450195 Msa0303290:CDS
GAGAATGAGTATGGTTCTTA+TGG 0.274714 2_3:-60451532 Msa0303290:CDS
GACAACAATTGAATGGATTC+AGG 0.295028 2_3:-60445616 Msa0303290:three_prime_UTR
ATAACAACAATGATTGTAAC+TGG 0.297091 2_3:+60445853 None:intergenic
CATACCTGAACCATTATTAT+AGG 0.305200 2_3:+60452180 None:intergenic
TTTAGATTGTGCAGAGGAAT+AGG 0.311741 2_3:+60446909 None:intergenic
CAAAATTATCTCCTTGCTTA+AGG 0.324600 2_3:+60446334 None:intergenic
GAAGAGGTGCAGAGCTATAT+CGG 0.346204 2_3:+60448389 None:intergenic
CTGTCTTCTGTTTATCTGGA+TGG 0.346308 2_3:-60446960 Msa0303290:CDS
TTTAAAAGTGTTGGAGGAAT+TGG 0.351478 2_3:+60448279 None:intergenic
AAAACGGCTAACGGCCTGTT+TGG 0.355837 2_3:+60454398 None:intergenic
ACACAGATTGAGAATGAGTA+TGG 0.358995 2_3:-60451541 Msa0303290:intron
AGATTGCAAATGATATGTTT+TGG 0.369178 2_3:-60454240 Msa0303290:exon
TTTAATATGTTTCAGCAATT+CGG 0.372768 2_3:-60448423 Msa0303290:intron
GTTTGGATTGGCTTATCTAC+TGG 0.375939 2_3:+60454415 None:intergenic
CGTCACCAGCTTCCCTGATC+GGG 0.385521 2_3:+60449817 None:intergenic
TGGTCTTGTACCCCTTCCTT+TGG 0.387134 2_3:+60447904 None:intergenic
AGCTAACCTGCACATATATA+TGG 0.387274 2_3:+60453561 None:intergenic
TCATTATAAGAGGGAATAGA+TGG 0.389020 2_3:+60448367 None:intergenic
AACTGTGTGCACCACAAGAT+TGG 0.390292 2_3:+60446018 None:intergenic
TCCTTCTGTAACTTGAATAT+AGG 0.391806 2_3:+60450332 None:intergenic
GCGCATGGTGGTTCAAACTT+TGG 0.397605 2_3:-60450002 Msa0303290:CDS
CAACGGAGGCCCTATAATAA+TGG 0.398981 2_3:-60452190 Msa0303290:CDS
TATAATGAAAAGACAACATA+TGG 0.399898 2_3:-60448352 Msa0303290:CDS
ACACTGGGTGGCTTACACAT+TGG 0.408168 2_3:-60450196 Msa0303290:CDS
GACTTCACATGTGGCTTTAG+TGG 0.409408 2_3:-60445986 Msa0303290:CDS
ACTTCAATCTAGGAAGATAT+TGG 0.410691 2_3:-60446525 Msa0303290:CDS
TTGTTAAAAGCCAAGGCATT+GGG 0.411271 2_3:-60453726 Msa0303290:CDS
ATACCTGAACCATTATTATA+GGG 0.412312 2_3:+60452181 None:intergenic
TGTCTTCTGTTTATCTGGAT+GGG 0.414843 2_3:-60446959 Msa0303290:CDS
AAGAAGACCGTCTTTGTAAG+TGG 0.419778 2_3:+60448323 None:intergenic
AGGCCCTATAATAATGGTTC+AGG 0.421563 2_3:-60452184 Msa0303290:intron
ACATGGGTCGTGTAAATTAT+GGG 0.425290 2_3:-60447086 Msa0303290:CDS
TTAGATTGTGCAGAGGAATA+GGG 0.428113 2_3:+60446910 None:intergenic
CTCACTTCATATGATTATGT+TGG 0.428575 2_3:-60449927 Msa0303290:CDS
ATATGCAGGATGCCCCGATC+AGG 0.430904 2_3:-60449830 Msa0303290:intron
TCACTTCATATGATTATGTT+GGG 0.434171 2_3:-60449926 Msa0303290:CDS
TCAGCTCGTGATGGATCCTT+TGG 0.434660 2_3:+60445685 None:intergenic
TAGGGCCTCCGTTGTCATAT+AGG 0.436256 2_3:+60452199 None:intergenic
TTTGTTAATGACTTCAATCT+AGG 0.437104 2_3:-60446535 Msa0303290:CDS
TGACATCATATTACAACTGA+TGG 0.438614 2_3:+60445954 None:intergenic
TTCAAATAGCACCTTTGGTA+TGG 0.441059 2_3:+60448081 None:intergenic
CAATTCAGACATATGTTCCT+TGG 0.447925 2_3:-60453695 Msa0303290:CDS
AAAACGAGCTTTCCTGGTGC+TGG 0.448104 2_3:+60453660 None:intergenic
TCATTGTTGTTATGTTTGTA+AGG 0.449076 2_3:-60445843 Msa0303290:three_prime_UTR
GACCTCTAGCTAGTGTGATC+AGG 0.451187 2_3:+60451485 None:intergenic
ACCTGCACATATATATGGTC+CGG 0.451719 2_3:+60453566 None:intergenic
GTTGACAATTCAAAATTCAA+TGG 0.452366 2_3:-60449795 Msa0303290:intron
TGTGGAATCAGCATCGGTCT+TGG 0.453327 2_3:+60450160 None:intergenic
AAAGCAGGATCAGATGATCT+TGG 0.453723 2_3:+60452851 None:intergenic
CCCACATTCTCCATTGACAT+TGG 0.454372 2_3:+60448247 None:intergenic
GTCAATGGAGAATGTGGGCC+AGG 0.455453 2_3:-60448242 Msa0303290:intron
CAGATCAAACTATCTCAAAT+CGG 0.456962 2_3:+60454331 None:intergenic
GATATATTTCAGAGTGGGAC+TGG 0.457922 2_3:-60452919 Msa0303290:intron
GTAGCTGTTGACTTCACTAC+TGG 0.461313 2_3:-60450368 Msa0303290:intron
ATCAGAAAATCCAATGTCAA+TGG 0.465833 2_3:-60448257 Msa0303290:CDS
CCTTATGTAGGTTGAAAACA+TGG 0.467680 2_3:-60447103 Msa0303290:intron
CTTAATTGATAAAACAAGTC+AGG 0.468122 2_3:-60446605 Msa0303290:CDS
ACTGTGTGCACCACAAGATT+GGG 0.468708 2_3:+60446019 None:intergenic
TTCTGATTTAAAAGTGTTGG+AGG 0.470344 2_3:+60448273 None:intergenic
TCACTACTGGTGATGATCCT+TGG 0.470878 2_3:-60450355 Msa0303290:CDS
GGCTAACGGCCTGTTTGGAT+TGG 0.471267 2_3:+60454403 None:intergenic
GATGCCCCGATCAGGGAAGC+TGG 0.471702 2_3:-60449822 Msa0303290:CDS
CTAAAGCCACATGTGAAGTC+TGG 0.472504 2_3:+60445989 None:intergenic
CTGGATGGGAATAGAGTACA+AGG 0.472701 2_3:-60446945 Msa0303290:CDS
ACGTCACCAGCTTCCCTGAT+CGG 0.476072 2_3:+60449816 None:intergenic
CTTGAGAAAGGAACTATTCG+TGG 0.476211 2_3:-60450665 Msa0303290:CDS
CTTGTGTGACAACAATTGAA+TGG 0.477311 2_3:-60445623 Msa0303290:three_prime_UTR
CAAGCTGCATATTCTGCATT+CGG 0.482767 2_3:-60446858 Msa0303290:CDS
TGGCAAATTACAATCACATA+AGG 0.485275 2_3:-60446881 Msa0303290:CDS
AAATATCAACCTCCAGGAAA+AGG 0.485794 2_3:-60446833 Msa0303290:CDS
ATTGTTAAAAGCCAAGGCAT+TGG 0.488829 2_3:-60453727 Msa0303290:CDS
TTATCTCCTTGCTTAAGGAC+TGG 0.489821 2_3:+60446339 None:intergenic
TGTGTTCAAGCCCAATGCCT+TGG 0.493204 2_3:+60453716 None:intergenic
ATATATTTCAGAGTGGGACT+GGG 0.500189 2_3:-60452918 Msa0303290:intron
TCCAATGTCAATGGAGAATG+TGG 0.502269 2_3:-60448248 Msa0303290:CDS
GACCGTCTTTGTAAGTGGAT+TGG 0.503198 2_3:+60448328 None:intergenic
ACACTACAGATGGAGGGTCC+AGG 0.506447 2_3:-60450694 Msa0303290:CDS
GTAGATAAGCCAATCCAAAC+AGG 0.508303 2_3:-60454412 Msa0303290:five_prime_UTR
TGGTATTTCAGGTTGAAAGA+TGG 0.510123 2_3:-60452254 Msa0303290:intron
CATACCAGTTTAAGAAAAGC+AGG 0.518308 2_3:+60452836 None:intergenic
TAATCATATGAAGTGAGATC+AGG 0.519237 2_3:+60449933 None:intergenic
CTGAATACGAAGCGAGGAGA+GGG 0.522505 2_3:-60448117 Msa0303290:intron
TTCTTCAAGAGCAGCTGCTG+TGG 0.523128 2_3:+60450142 None:intergenic
GAGCTGACCTCTTCCTGCTA+TGG 0.523433 2_3:-60445669 Msa0303290:three_prime_UTR
AATCTGCATGAACCAGCACC+AGG 0.527584 2_3:-60453672 Msa0303290:CDS
TCCACAGTACCAACATAAGT+TGG 0.528596 2_3:+60447884 None:intergenic
AAAACATGGAGAGAAGATGT+AGG 0.530118 2_3:-60445910 Msa0303290:three_prime_UTR
CCCGGACCATATATATGTGC+AGG 0.530979 2_3:-60453567 Msa0303290:intron
AGCTAGAGGTCATCTCGGGC+AGG 0.531354 2_3:-60451473 Msa0303290:CDS
ACCTTCCTATCGAAGATGAA+AGG 0.533955 2_3:+60447063 None:intergenic
TCCAGGGAAAATCTTGAGAA+AGG 0.534887 2_3:-60450677 Msa0303290:CDS
AGCAAATACCGGTGCAGATG+AGG 0.534973 2_3:-60449967 Msa0303290:CDS
TTCATGGAAAATAACCAACT+TGG 0.535334 2_3:+60452887 None:intergenic
ACACTAGCTAGAGGTCATCT+CGG 0.535816 2_3:-60451478 Msa0303290:CDS
CGAGTTTGTGACAAAGGTTG+AGG 0.536732 2_3:+60453610 None:intergenic
ACTTCACATGTGGCTTTAGT+GGG 0.538816 2_3:-60445985 Msa0303290:CDS
TGTCACACAAGAATAGTTGT+CGG 0.540518 2_3:+60445635 None:intergenic
ATCAGGCTTACCAAAGATTG+TGG 0.540566 2_3:-60445772 Msa0303290:three_prime_UTR
CCTTGCTTAAGGACTGGAGC+AGG 0.543889 2_3:+60446345 None:intergenic
AAAAGGTTGATGAATAAAGC+TGG 0.544019 2_3:-60446816 Msa0303290:intron
ACAACAATTGAATGGATTCA+GGG 0.544644 2_3:-60445615 Msa0303290:three_prime_UTR
TGCACCACAAGATTGGGATC+TGG 0.544881 2_3:+60446025 None:intergenic
TAAGAGGGAATAGATGGAAG+AGG 0.547676 2_3:+60448373 None:intergenic
ACTGGGGTGGTATCCCAAGT+TGG 0.548882 2_3:-60452901 Msa0303290:CDS
GCCTTTCATCTTCGATAGGA+AGG 0.550132 2_3:-60447064 Msa0303290:intron
TATTTCAGGTTGAAAGATGG+TGG 0.551926 2_3:-60452251 Msa0303290:intron
CACTAGCTAGAGGTCATCTC+GGG 0.555465 2_3:-60451477 Msa0303290:CDS
CAGAAGGAGTTCAATGCCCC+AGG 0.556200 2_3:-60450317 Msa0303290:CDS
TCGGTGAAATATCAACCTCC+AGG 0.557299 2_3:-60446839 Msa0303290:CDS
GCCTATATTCAAGTTACAGA+AGG 0.558771 2_3:-60450333 Msa0303290:CDS
TGTGCAGGTAATACTCGAGT+TGG 0.558787 2_3:-60446053 Msa0303290:intron
ATTTCAGGTTGAAAGATGGT+GGG 0.562271 2_3:-60452250 Msa0303290:intron
CACTACAGATGGAGGGTCCA+GGG 0.562447 2_3:-60450693 Msa0303290:CDS
AAGAGGTGCAGAGCTATATC+GGG 0.563972 2_3:+60448390 None:intergenic
TCACCACCGATGATCCGAAA+AGG 0.565666 2_3:+60454205 None:intergenic
AGATAGATTGTTAAAAGCCA+AGG 0.566985 2_3:-60453733 Msa0303290:CDS
CCGGCTCTTTAATAGTTGAG+AGG 0.568725 2_3:-60446390 Msa0303290:intron
ATGGGCCTTTCATCTTCGAT+AGG 0.569902 2_3:-60447068 Msa0303290:CDS
CCTGCACATATATATGGTCC+GGG 0.572355 2_3:+60453567 None:intergenic
AGCTGCTGTGGAATCAGCAT+CGG 0.572595 2_3:+60450154 None:intergenic
AATATGTTTCAGCAATTCGG+AGG 0.573373 2_3:-60448420 Msa0303290:intron
AGGTTTAGAGTTTACCCGTA+CGG 0.573643 2_3:-60445890 Msa0303290:three_prime_UTR
TCATGGAAAATAACCAACTT+GGG 0.575084 2_3:+60452888 None:intergenic
TGATAAAACAAGTCAGGTCA+AGG 0.579296 2_3:-60446599 Msa0303290:CDS
TAGCTAGTGTGATCAGGTGA+TGG 0.580534 2_3:+60451491 None:intergenic
TAACCTGATTAAAACAATCA+CGG 0.580759 2_3:+60454275 None:intergenic
CAATCTAGGAAGATATTGGC+CGG 0.581426 2_3:-60446521 Msa0303290:intron
GGTTCGTAACAATAACCGTA+CGG 0.581595 2_3:+60445875 None:intergenic
TATGCAGGATGCCCCGATCA+GGG 0.583274 2_3:-60449829 Msa0303290:intron
GCTGGTTCATGCAGATTCCA+AGG 0.584376 2_3:+60453678 None:intergenic
ATCTCCAGATCCCAATCTTG+TGG 0.587162 2_3:-60446029 Msa0303290:CDS
GGAGATCGAGTTTGTGACAA+AGG 0.587523 2_3:+60453604 None:intergenic
CTCCTTGTGATGGTTCGACC+CGG 0.589278 2_3:-60453585 Msa0303290:CDS
TGTAACTTGAATATAGGCCA+AGG 0.599370 2_3:+60450338 None:intergenic
GTTCGTAACAATAACCGTAC+GGG 0.603770 2_3:+60445876 None:intergenic
ATAGTCAGCCTCATCTGCAC+CGG 0.606320 2_3:+60449959 None:intergenic
GGTACAAGACCAACTTATGT+TGG 0.608399 2_3:-60447893 Msa0303290:intron
TTTCAGGTTGAAAGATGGTG+GGG 0.609152 2_3:-60452249 Msa0303290:intron
GAATACGAAGCGAGGAGAGG+GGG 0.610586 2_3:-60448115 Msa0303290:intron
AATCTTGTGGTGCACACAGT+TGG 0.613467 2_3:-60446016 Msa0303290:CDS
GTCACCAGCTTCCCTGATCG+GGG 0.614366 2_3:+60449818 None:intergenic
GTTGTCAGATACACTACAGA+TGG 0.618620 2_3:-60450704 Msa0303290:intron
AAGAATCTTGTCCATACCAA+AGG 0.619762 2_3:-60448092 Msa0303290:intron
GACCAATCCACTTACAAAGA+CGG 0.620994 2_3:-60448330 Msa0303290:CDS
CAAACTCGATCTCCTTGTGA+TGG 0.622066 2_3:-60453595 Msa0303290:CDS
AAATAAACTTACGTCGACAA+AGG 0.623330 2_3:+60450284 None:intergenic
ACTGGGTGGCTTACACATTG+GGG 0.633275 2_3:-60450194 Msa0303290:CDS
GTCAGATACACTACAGATGG+AGG 0.634994 2_3:-60450701 Msa0303290:intron
AGGAAGAGGTCAGCTCGTGA+TGG 0.635593 2_3:+60445676 None:intergenic
GTCCGGGTCGAACCATCACA+AGG 0.637531 2_3:+60453583 None:intergenic
TAAACTTACGTCGACAAAGG+TGG 0.639307 2_3:+60450287 None:intergenic
CCTGCTCCAGTCCTTAAGCA+AGG 0.639457 2_3:-60446345 Msa0303290:CDS
ACGACAATGTCTATAACCAA+AGG 0.646276 2_3:-60445701 Msa0303290:three_prime_UTR
TCTGCACAATCTAAACGAAG+TGG 0.647709 2_3:-60446901 Msa0303290:CDS
ATATGTTTCAGCAATTCGGA+GGG 0.648199 2_3:-60448419 Msa0303290:intron
TGAATACGAAGCGAGGAGAG+GGG 0.649015 2_3:-60448116 Msa0303290:intron
GTTCCTCTCCTATATGACAA+CGG 0.650170 2_3:-60452207 Msa0303290:CDS
TATATTTCAGAGTGGGACTG+GGG 0.656299 2_3:-60452917 Msa0303290:intron
ACTTCGTTTAGATTGTGCAG+AGG 0.656774 2_3:+60446903 None:intergenic
ACTGAATACGAAGCGAGGAG+AGG 0.657124 2_3:-60448118 Msa0303290:intron
GGTGAGCCAGACTTCACATG+TGG 0.658024 2_3:-60445995 Msa0303290:CDS
CACCTGATCACACTAGCTAG+AGG 0.658720 2_3:-60451487 Msa0303290:CDS
TAACAACAATGATTGTAACT+GGG 0.661473 2_3:+60445854 None:intergenic
ATTTCAGAGTGGGACTGGGG+TGG 0.663732 2_3:-60452914 Msa0303290:intron
CCAATGTCAATGGAGAATGT+GGG 0.667450 2_3:-60448247 Msa0303290:CDS
CCTCCGTTGTCATATAGGAG+AGG 0.673614 2_3:+60452204 None:intergenic
TCAGATACACTACAGATGGA+GGG 0.694830 2_3:-60450700 Msa0303290:intron
ATGGGAATAGAGTACAAGGG+TGG 0.696927 2_3:-60446941 Msa0303290:CDS
CTTATGTAGGTTGAAAACAT+GGG 0.721813 2_3:-60447102 Msa0303290:intron
GGACTGGAGCAGGAACGTAG+AGG 0.738953 2_3:+60446355 None:intergenic
CCTCTCCTATATGACAACGG+AGG 0.758778 2_3:-60452204 Msa0303290:CDS
TGGATGGGAATAGAGTACAA+GGG 0.765881 2_3:-60446944 Msa0303290:CDS
GGAACGTAGAGGTTGCACTG+TGG 0.792113 2_3:+60446366 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTCAATTTCAATAAAAA+CGG + chr2_3:60445622-60445641 None:intergenic 10.0%
!!! TTAAATCATATTTTAGTTAT+GGG - chr2_3:60447290-60447309 Msa0303290:intron 10.0%
!!! TAATGTATTGAATTTTTTAA+TGG - chr2_3:60449115-60449134 Msa0303290:intron 10.0%
!!! AATGTATTGAATTTTTTAAT+GGG - chr2_3:60449116-60449135 Msa0303290:intron 10.0%
!! AAAATAGAAAAATAAAAAAC+AGG + chr2_3:60452220-60452239 None:intergenic 10.0%
!!! TTTTAATATTTCTTATTTCA+TGG - chr2_3:60452848-60452867 Msa0303290:CDS 10.0%
!!! TTTAATATTTCTTATTTCAT+GGG - chr2_3:60452849-60452868 Msa0303290:CDS 10.0%
!!! ATTTTTGTCATTAAAAAATT+GGG - chr2_3:60453429-60453448 Msa0303290:intron 10.0%
!!! TTTTTTGAAATGTTTTCATA+TGG - chr2_3:60446210-60446229 Msa0303290:intron 15.0%
!!! GCAATTAAATTTTAAGTTAT+GGG + chr2_3:60446468-60446487 None:intergenic 15.0%
!! ATTTAGAAATATCATTCTTT+AGG + chr2_3:60446746-60446765 None:intergenic 15.0%
!!! GATAGTTATATGAAATTTTA+TGG - chr2_3:60446819-60446838 Msa0303290:CDS 15.0%
!! AAATAGGATATCAAAATATA+AGG + chr2_3:60446954-60446973 None:intergenic 15.0%
!!! GTTAAATCATATTTTAGTTA+TGG - chr2_3:60447289-60447308 Msa0303290:intron 15.0%
!! AAAAATAGTAATATTGCATT+GGG + chr2_3:60447432-60447451 None:intergenic 15.0%
!! TAAAAATAGTAATATTGCAT+TGG + chr2_3:60447433-60447452 None:intergenic 15.0%
!! ATTATTAGTAATAGGTATTA+GGG + chr2_3:60448073-60448092 None:intergenic 15.0%
!!! AATATACATAATTCAAGTTT+TGG + chr2_3:60448232-60448251 None:intergenic 15.0%
!!! TATATTTTGTTAACATTTAG+TGG - chr2_3:60448246-60448265 Msa0303290:CDS 15.0%
!!! AGCTTAAATTTAAGATTTTT+GGG + chr2_3:60449201-60449220 None:intergenic 15.0%
!! AGAAAGAAAAAAAATAAGAA+AGG + chr2_3:60449268-60449287 None:intergenic 15.0%
!! ATTAACATCACTTATAAAAT+TGG + chr2_3:60449387-60449406 None:intergenic 15.0%
!!! TTTTATAAGTGATGTTAATA+AGG - chr2_3:60449388-60449407 Msa0303290:intron 15.0%
!!! AAGAAATTTTGAGAAAAAAT+GGG - chr2_3:60449877-60449896 Msa0303290:intron 15.0%
!!! ATTTTAATGACTTTTAGTTT+AGG - chr2_3:60451031-60451050 Msa0303290:intron 15.0%
!!! TTTTAATGACTTTTAGTTTA+GGG - chr2_3:60451032-60451051 Msa0303290:intron 15.0%
!!! AGGAAAAATAATATTAGTTT+GGG + chr2_3:60451487-60451506 None:intergenic 15.0%
!! AAATAATTGAATAAAAAGAC+GGG + chr2_3:60451510-60451529 None:intergenic 15.0%
!! CAAATAATTGAATAAAAAGA+CGG + chr2_3:60451511-60451530 None:intergenic 15.0%
!!! TAAGATCAACTTATATATTT+TGG - chr2_3:60452188-60452207 Msa0303290:CDS 15.0%
!!! TTGTACAAAGAAAAATATTT+TGG - chr2_3:60452260-60452279 Msa0303290:intron 15.0%
!!! ATATTTAATTTGCATGATTT+GGG + chr2_3:60452561-60452580 None:intergenic 15.0%
!!! AATATTTAATTTGCATGATT+TGG + chr2_3:60452562-60452581 None:intergenic 15.0%
!!! CATTTTTGTCATTAAAAAAT+TGG - chr2_3:60453428-60453447 Msa0303290:intron 15.0%
!!! TTTTTGTCATTAAAAAATTG+GGG - chr2_3:60453430-60453449 Msa0303290:intron 15.0%
!! GCAAAAATAATTTATTCAAT+AGG + chr2_3:60453523-60453542 None:intergenic 15.0%
!!! GGCAATTAAATTTTAAGTTA+TGG + chr2_3:60446469-60446488 None:intergenic 20.0%
!! AATGAATAGAAAAATTCCAT+GGG + chr2_3:60446772-60446791 None:intergenic 20.0%
!! TAATGAATAGAAAAATTCCA+TGG + chr2_3:60446773-60446792 None:intergenic 20.0%
!! AATCGTAAAAAAGAGAAAAT+AGG + chr2_3:60446970-60446989 None:intergenic 20.0%
!! CGTTATCATAAGATATAATA+AGG + chr2_3:60447195-60447214 None:intergenic 20.0%
!! AATCAGCACAATAATTATAA+GGG + chr2_3:60447590-60447609 None:intergenic 20.0%
!! TAATCAGCACAATAATTATA+AGG + chr2_3:60447591-60447610 None:intergenic 20.0%
!!! TTTTTACATTTCTATCATTG+AGG - chr2_3:60447706-60447725 Msa0303290:intron 20.0%
!! TTATTATAGTTTGGTATTTC+AGG - chr2_3:60447736-60447755 Msa0303290:intron 20.0%
!!! AATCCCTATAATTTTAGTAT+GGG + chr2_3:60447989-60448008 None:intergenic 20.0%
!!! AAATCCCTATAATTTTAGTA+TGG + chr2_3:60447990-60448009 None:intergenic 20.0%
!! AACTAATATTTCATATGATG+TGG - chr2_3:60448037-60448056 Msa0303290:intron 20.0%
!! GATTATTAGTAATAGGTATT+AGG + chr2_3:60448074-60448093 None:intergenic 20.0%
!! ATACCTATTACTAATAATCT+AGG - chr2_3:60448075-60448094 Msa0303290:intron 20.0%
!!! ATCTTAAAAGTATTCAAACA+CGG + chr2_3:60448360-60448379 None:intergenic 20.0%
!! TTAACCATTTATCTTATGTA+AGG - chr2_3:60448405-60448424 Msa0303290:CDS 20.0%
!! TAACCATTTATCTTATGTAA+GGG - chr2_3:60448406-60448425 Msa0303290:CDS 20.0%
!!! TCTCATATTTTCTAGTTAAA+TGG - chr2_3:60448777-60448796 Msa0303290:intron 20.0%
!!! CAGCTTAAATTTAAGATTTT+TGG + chr2_3:60449202-60449221 None:intergenic 20.0%
!! AGAAACGAAATATTAATGTT+CGG + chr2_3:60449467-60449486 None:intergenic 20.0%
!! TATGTTGTTACAGTTAAAAT+AGG + chr2_3:60449540-60449559 None:intergenic 20.0%
!! TTAGGTTATAGAATCAAATA+TGG + chr2_3:60449597-60449616 None:intergenic 20.0%
!!! GAAGAAATTTTGAGAAAAAA+TGG - chr2_3:60449876-60449895 Msa0303290:intron 20.0%
!!! TCAAACTTTGGATTTTATAA+TGG - chr2_3:60450011-60450030 Msa0303290:intron 20.0%
!!! ATATCATGAAAACATGTTTT+GGG + chr2_3:60450349-60450368 None:intergenic 20.0%
!!! AATATCATGAAAACATGTTT+TGG + chr2_3:60450350-60450369 None:intergenic 20.0%
!! GAGGAAAAATAATATTAGTT+TGG + chr2_3:60451488-60451507 None:intergenic 20.0%
!! TTTAATATGTTTCAGCAATT+CGG - chr2_3:60451578-60451597 Msa0303290:intron 20.0%
!! TATAATGAAAAGACAACATA+TGG - chr2_3:60451649-60451668 Msa0303290:intron 20.0%
!!! ATTTTCTGATTTAAAAGTGT+TGG + chr2_3:60451734-60451753 None:intergenic 20.0%
!!! TATATAAGTTGATCTTAGAA+TGG + chr2_3:60452185-60452204 None:intergenic 20.0%
!!! TACAAAGAAAAATATTTTGG+AGG - chr2_3:60452263-60452282 Msa0303290:intron 20.0%
!!! ACAAAGAAAAATATTTTGGA+GGG - chr2_3:60452264-60452283 Msa0303290:intron 20.0%
!!! ATTTTTTCAACATTTTCACT+AGG - chr2_3:60452334-60452353 Msa0303290:intron 20.0%
!! TAAAAAAAGCAAATAGTTGT+TGG + chr2_3:60452421-60452440 None:intergenic 20.0%
!!! TTCTTTAAAAAAGAAGTATC+AGG - chr2_3:60452619-60452638 Msa0303290:intron 20.0%
!!! CATGAATTTTGTTATATAGT+TGG - chr2_3:60452698-60452717 Msa0303290:intron 20.0%
!!! TTTTCTTTCCATATGTAATT+TGG + chr2_3:60453217-60453236 None:intergenic 20.0%
!!! TTTTGTCATTAAAAAATTGG+GGG - chr2_3:60453431-60453450 Msa0303290:intron 20.0%
!! TTAATACTCAGTTATCTATA+TGG - chr2_3:60453562-60453581 Msa0303290:intron 20.0%
!! TTCCTTCAAATATTAATTTC+CGG - chr2_3:60453592-60453611 Msa0303290:CDS 20.0%
!!! TAGTAATTTGATTTGAGTTT+TGG - chr2_3:60453853-60453872 Msa0303290:intron 20.0%
!!! TGATTCAATTGTTTTTTATC+AGG - chr2_3:60454212-60454231 Msa0303290:CDS 20.0%
! ATTTCAATAAAAACGGCTAA+CGG + chr2_3:60445615-60445634 None:intergenic 25.0%
! TAACCTGATTAAAACAATCA+CGG + chr2_3:60445729-60445748 None:intergenic 25.0%
!! AGATTGCAAATGATATGTTT+TGG - chr2_3:60445761-60445780 Msa0303290:three_prime_UTR 25.0%
!!! AATGATATGTTTTGGAAAGA+TGG - chr2_3:60445769-60445788 Msa0303290:three_prime_UTR 25.0%
! CTAACTTCTCTTAATTTAGT+GGG - chr2_3:60445859-60445878 Msa0303290:three_prime_UTR 25.0%
! CATAATTGCATTGTAATCAA+TGG - chr2_3:60445913-60445932 Msa0303290:three_prime_UTR 25.0%
! ATCTCATCAAAACAAAATGT+TGG + chr2_3:60446007-60446026 None:intergenic 25.0%
! AGATATAAGTGAAATGCTAA+AGG - chr2_3:60446023-60446042 Msa0303290:CDS 25.0%
! TATGATGTCTCAAAGAATAA+CGG + chr2_3:60446184-60446203 None:intergenic 25.0%
!! CAGTGAATAATGTATGTTTT+TGG - chr2_3:60446556-60446575 Msa0303290:CDS 25.0%
!! TTTTCAACACACTCTTTTAT+TGG - chr2_3:60446627-60446646 Msa0303290:CDS 25.0%
!!! GATATTTCTAAATTTTCCCA+TGG - chr2_3:60446753-60446772 Msa0303290:intron 25.0%
! TAGTATCTAACTAGAATTTG+AGG - chr2_3:60446791-60446810 Msa0303290:intron 25.0%
! TTAAGAAGCAAAAGATCATT+TGG - chr2_3:60446883-60446902 Msa0303290:CDS 25.0%
! AAGATTAGCAATTACTAAGT+TGG + chr2_3:60447234-60447253 None:intergenic 25.0%
! TTGTTAAGGAAACTAAAAGT+AGG - chr2_3:60447340-60447359 Msa0303290:intron 25.0%
! GGTTTGTACTTATTATAGTT+TGG - chr2_3:60447727-60447746 Msa0303290:intron 25.0%
! ATACCTGAACCATTATTATA+GGG + chr2_3:60447823-60447842 None:intergenic 25.0%
! AGTTCCCATACTAAAATTAT+AGG - chr2_3:60447982-60448001 Msa0303290:intron 25.0%
! GTTCCCATACTAAAATTATA+GGG - chr2_3:60447983-60448002 Msa0303290:intron 25.0%
! CTAAAATTATAGGGATTTGA+TGG - chr2_3:60447992-60448011 Msa0303290:intron 25.0%
! TGACCTAGATTATTAGTAAT+AGG + chr2_3:60448081-60448100 None:intergenic 25.0%
!! TTTTGTTAACATTTAGTGGA+AGG - chr2_3:60448250-60448269 Msa0303290:CDS 25.0%
! ATTTAGGAAATCACAACAAT+AGG + chr2_3:60448302-60448321 None:intergenic 25.0%
! ATTACATAATTCCAGCATTT+AGG + chr2_3:60448318-60448337 None:intergenic 25.0%
! TAAATGCTGGAATTATGTAA+TGG - chr2_3:60448317-60448336 Msa0303290:CDS 25.0%
! GTAGATGTTATAATAGAAGA+CGG - chr2_3:60448632-60448651 Msa0303290:intron 25.0%
! AAGTGTACATATAGATAAGA+GGG + chr2_3:60448682-60448701 None:intergenic 25.0%
! AAAGTGTACATATAGATAAG+AGG + chr2_3:60448683-60448702 None:intergenic 25.0%
!! CTATATGTACACTTTTATAG+TGG - chr2_3:60448688-60448707 Msa0303290:intron 25.0%
!!! GATATTTTAAAATCCCACAT+CGG - chr2_3:60448724-60448743 Msa0303290:intron 25.0%
!!! TTTCTTGTTGAAAGTTTTGA+GGG + chr2_3:60449052-60449071 None:intergenic 25.0%
! ATAAATCAGATAATGTTCAC+TGG - chr2_3:60449073-60449092 Msa0303290:intron 25.0%
!!! GAATTTTTTAATGGGTACAT+TGG - chr2_3:60449124-60449143 Msa0303290:intron 25.0%
! TCTTAAATTTAAGCTGACAA+TGG - chr2_3:60449206-60449225 Msa0303290:intron 25.0%
!!! TTTTTTTCTTTCTGTGTTTC+CGG - chr2_3:60449275-60449294 Msa0303290:intron 25.0%
! TTAATATTTCGTTTCTCTAG+TGG - chr2_3:60449471-60449490 Msa0303290:intron 25.0%
! TCAAATATGGTCAAAACAAT+GGG + chr2_3:60449584-60449603 None:intergenic 25.0%
! ATCAAATATGGTCAAAACAA+TGG + chr2_3:60449585-60449604 None:intergenic 25.0%
! ACAAAAGGAGAATATGTATT+AGG + chr2_3:60449615-60449634 None:intergenic 25.0%
!!! TTTTATAATGGAGCAAATAC+CGG - chr2_3:60450023-60450042 Msa0303290:intron 25.0%
! TCACTTCATATGATTATGTT+GGG - chr2_3:60450075-60450094 Msa0303290:intron 25.0%
! AACTTGATTATTTCATATGC+AGG - chr2_3:60450157-60450176 Msa0303290:CDS 25.0%
! GTTGACAATTCAAAATTCAA+TGG - chr2_3:60450206-60450225 Msa0303290:CDS 25.0%
! ATAACCAACAAACTAAAAAG+TGG + chr2_3:60450276-60450295 None:intergenic 25.0%
!! TATCATGAAAACATGTTTTG+GGG + chr2_3:60450348-60450367 None:intergenic 25.0%
! TCTGACTCAATTACTAAATA+TGG + chr2_3:60450378-60450397 None:intergenic 25.0%
! TAATTGAGTCAGATAGATAA+TGG - chr2_3:60450385-60450404 Msa0303290:intron 25.0%
! AACTAAATATTAGTGGTTCA+AGG + chr2_3:60450589-60450608 None:intergenic 25.0%
!! CAAGTTGAACTAAATATTAG+TGG + chr2_3:60450596-60450615 None:intergenic 25.0%
!!! TTGCAAATTTTTTGCAATCA+TGG + chr2_3:60450648-60450667 None:intergenic 25.0%
! TAGTACAGATAACTAGAAAA+GGG - chr2_3:60450726-60450745 Msa0303290:intron 25.0%
! TGTATTCATTACATGCTAAT+AGG + chr2_3:60450946-60450965 None:intergenic 25.0%
! AGTCCTTATAACTTAGTATT+TGG - chr2_3:60451191-60451210 Msa0303290:intron 25.0%
! AGTCCAAATACTAAGTTATA+AGG + chr2_3:60451197-60451216 None:intergenic 25.0%
! TTGAATAGTGGTTATAAGAA+GGG + chr2_3:60451267-60451286 None:intergenic 25.0%
!! GAACTTATCATTTTATATGC+CGG + chr2_3:60451427-60451446 None:intergenic 25.0%
! TACTGCTGAATATCTTATAT+TGG - chr2_3:60451461-60451480 Msa0303290:intron 25.0%
! TTGCTGAAACATATTAAACA+CGG + chr2_3:60451576-60451595 None:intergenic 25.0%
!! GTTGTCTTTTCATTATAAGA+GGG + chr2_3:60451646-60451665 None:intergenic 25.0%
!! TGTTGTCTTTTCATTATAAG+AGG + chr2_3:60451647-60451666 None:intergenic 25.0%
! ATGAACAAAAATAACATACC+TGG + chr2_3:60451780-60451799 None:intergenic 25.0%
! TTCAATAATATACCAGTTAG+GGG + chr2_3:60451815-60451834 None:intergenic 25.0%
! CTTCAATAATATACCAGTTA+GGG + chr2_3:60451816-60451835 None:intergenic 25.0%
! AATAAGAAACCAAAAAACTG+AGG + chr2_3:60451856-60451875 None:intergenic 25.0%
!! TTCTAGATATACAAGACTTT+TGG + chr2_3:60452000-60452019 None:intergenic 25.0%
! AAAAGAGAAGTTATAGGAAA+AGG + chr2_3:60453248-60453267 None:intergenic 25.0%
! ACATACAAAAGAGAAGTTAT+AGG + chr2_3:60453254-60453273 None:intergenic 25.0%
! CTTAATTGATAAAACAAGTC+AGG - chr2_3:60453396-60453415 Msa0303290:intron 25.0%
! TTTGTTAATGACTTCAATCT+AGG - chr2_3:60453466-60453485 Msa0303290:intron 25.0%
!! GGAATAAGATAGTATTTTAC+CGG + chr2_3:60453502-60453521 None:intergenic 25.0%
! TATCTATCTTAAGTCATCAT+CGG - chr2_3:60453763-60453782 Msa0303290:intron 25.0%
! TAACAACAATGATTGTAACT+GGG + chr2_3:60454150-60454169 None:intergenic 25.0%
! ATAACAACAATGATTGTAAC+TGG + chr2_3:60454151-60454170 None:intergenic 25.0%
!! TCATTGTTGTTATGTTTGTA+AGG - chr2_3:60454158-60454177 Msa0303290:intron 25.0%
CAGATCAAACTATCTCAAAT+CGG + chr2_3:60445673-60445692 None:intergenic 30.0%
GCTAACTTCTCTTAATTTAG+TGG - chr2_3:60445858-60445877 Msa0303290:three_prime_UTR 30.0%
!! ACACTTCCTCATTTTTAAAC+AGG - chr2_3:60445949-60445968 Msa0303290:exon 30.0%
CCAAAACCTGTTTAAAAATG+AGG + chr2_3:60445958-60445977 None:intergenic 30.0%
!! CCTCATTTTTAAACAGGTTT+TGG - chr2_3:60445955-60445974 Msa0303290:exon 30.0%
CTCTTGTAATCTTTCTCATA+AGG - chr2_3:60446136-60446155 Msa0303290:intron 30.0%
ATGATGTCTCAAAGAATAAC+GGG + chr2_3:60446183-60446202 None:intergenic 30.0%
! TTCCTTCTAATTTGCAGTAT+TGG - chr2_3:60446243-60446262 Msa0303290:intron 30.0%
! TCCTTCTAATTTGCAGTATT+GGG - chr2_3:60446244-60446263 Msa0303290:intron 30.0%
AGATAGATTGTTAAAAGCCA+AGG - chr2_3:60446268-60446287 Msa0303290:intron 30.0%
! CAAATGAACTTTAGGAAATC+TGG + chr2_3:60446713-60446732 None:intergenic 30.0%
CAGATTTCCTAAAGTTCATT+TGG - chr2_3:60446711-60446730 Msa0303290:intron 30.0%
TTTCCTAAAGTTCATTTGGA+TGG - chr2_3:60446715-60446734 Msa0303290:intron 30.0%
TCATGCCAAAAGATGATAAT+GGG + chr2_3:60446848-60446867 None:intergenic 30.0%
ATCATGCCAAAAGATGATAA+TGG + chr2_3:60446849-60446868 None:intergenic 30.0%
AATGCAGATGGAAATTGTAA+GGG + chr2_3:60447004-60447023 None:intergenic 30.0%
TACAGTGATATATTTCAGAG+TGG - chr2_3:60447076-60447095 Msa0303290:CDS 30.0%
ACAGTGATATATTTCAGAGT+GGG - chr2_3:60447077-60447096 Msa0303290:CDS 30.0%
TCATGGAAAATAACCAACTT+GGG + chr2_3:60447116-60447135 None:intergenic 30.0%
TTCATGGAAAATAACCAACT+TGG + chr2_3:60447117-60447136 None:intergenic 30.0%
CTTAGTAATTGCTAATCTTG+TGG - chr2_3:60447235-60447254 Msa0303290:intron 30.0%
ATTTAACTAATCTGTGACAG+CGG + chr2_3:60447276-60447295 None:intergenic 30.0%
TAAAAGTAGGATGTTTGCAT+TGG - chr2_3:60447353-60447372 Msa0303290:intron 30.0%
AGTAATATTGCATTGGGAAA+TGG + chr2_3:60447426-60447445 None:intergenic 30.0%
AATGCTAAAGAATGCTCTTA+GGG + chr2_3:60447471-60447490 None:intergenic 30.0%
AAATGCTAAAGAATGCTCTT+AGG + chr2_3:60447472-60447491 None:intergenic 30.0%
!! CTTTGGGGTAAATAACTAAA+GGG + chr2_3:60447495-60447514 None:intergenic 30.0%
!!! TTTGGTGTTTTACATGGATT+AGG - chr2_3:60447555-60447574 Msa0303290:intron 30.0%
! TATAGGAGAGGAACAAATTT+TGG + chr2_3:60447788-60447807 None:intergenic 30.0%
CATACCTGAACCATTATTAT+AGG + chr2_3:60447824-60447843 None:intergenic 30.0%
! ATGCTGTTTGTTTGTTGAAT+TGG - chr2_3:60447841-60447860 Msa0303290:intron 30.0%
! GTTGATTCTATCTGATTGAT+GGG - chr2_3:60447863-60447882 Msa0303290:intron 30.0%
! GAAAGTATATGTACTGATGT+TGG - chr2_3:60447949-60447968 Msa0303290:intron 30.0%
! ATGTACTGATGTTGGAAAAT+TGG - chr2_3:60447957-60447976 Msa0303290:intron 30.0%
TATAGGGATTTGATGGAAAA+TGG - chr2_3:60447999-60448018 Msa0303290:intron 30.0%
CTGGAATTATGTAATGGTAT+AGG - chr2_3:60448323-60448342 Msa0303290:CDS 30.0%
TCTCCCTTACATAAGATAAA+TGG + chr2_3:60448412-60448431 None:intergenic 30.0%
! ACATAAAAGCACATACAGAA+TGG + chr2_3:60448557-60448576 None:intergenic 30.0%
GTTAAATAACCATGAGAGAT+AGG + chr2_3:60448588-60448607 None:intergenic 30.0%
AGTGTACATATAGATAAGAG+GGG + chr2_3:60448681-60448700 None:intergenic 30.0%
TTTCCCAAGTCTTTATACTT+GGG + chr2_3:60448803-60448822 None:intergenic 30.0%
ATTTCCCAAGTCTTTATACT+TGG + chr2_3:60448804-60448823 None:intergenic 30.0%
TTATCCCTATTTGAAAAGCA+GGG - chr2_3:60448854-60448873 Msa0303290:intron 30.0%
!! ACTTGTGGTTTGTTATTACT+TGG + chr2_3:60448897-60448916 None:intergenic 30.0%
AGTAATAACAAACCACAAGT+AGG - chr2_3:60448897-60448916 Msa0303290:intron 30.0%
CTTAGCACAAAAAAGGAATT+CGG - chr2_3:60448935-60448954 Msa0303290:intron 30.0%
GTTTGTGGTTTGATATTACT+TGG - chr2_3:60448994-60449013 Msa0303290:intron 30.0%
TTTGATATTACTTGGACCAT+TGG - chr2_3:60449002-60449021 Msa0303290:intron 30.0%
! CTTTCTTGTTGAAAGTTTTG+AGG + chr2_3:60449053-60449072 None:intergenic 30.0%
ATACTTGTACAGTAAAGTAG+AGG + chr2_3:60449175-60449194 None:intergenic 30.0%
ATGGAGATGTGCAATATTTA+TGG - chr2_3:60449225-60449244 Msa0303290:intron 30.0%
AATATTAATGTTCGGAAGGA+GGG + chr2_3:60449459-60449478 None:intergenic 30.0%
AAATATTAATGTTCGGAAGG+AGG + chr2_3:60449460-60449479 None:intergenic 30.0%
ACGAAATATTAATGTTCGGA+AGG + chr2_3:60449463-60449482 None:intergenic 30.0%
! TGGCTCATTTTGTTACATTT+GGG - chr2_3:60449491-60449510 Msa0303290:intron 30.0%
TCCTTCTGTAACTTGAATAT+AGG + chr2_3:60449672-60449691 None:intergenic 30.0%
AAATAAACTTACGTCGACAA+AGG + chr2_3:60449720-60449739 None:intergenic 30.0%
TCGACGTAAGTTTATTTGTA+TGG - chr2_3:60449723-60449742 Msa0303290:intron 30.0%
! TTATCAGCGAATTTTACACT+GGG - chr2_3:60449790-60449809 Msa0303290:intron 30.0%
! ATAGGTTGAGACATACATAT+AGG + chr2_3:60449911-60449930 None:intergenic 30.0%
! ATCATAATGCGGTTTTCAAA+CGG + chr2_3:60449943-60449962 None:intergenic 30.0%
! TATGATTGACCCTTTTGAAT+TGG - chr2_3:60449957-60449976 Msa0303290:CDS 30.0%
! ATGATTGACCCTTTTGAATT+GGG - chr2_3:60449958-60449977 Msa0303290:CDS 30.0%
TTAGAAGACCCAATTCAAAA+GGG + chr2_3:60449969-60449988 None:intergenic 30.0%
ATTAGAAGACCCAATTCAAA+AGG + chr2_3:60449970-60449989 None:intergenic 30.0%
TAATCATATGAAGTGAGATC+AGG + chr2_3:60450071-60450090 None:intergenic 30.0%
CTCACTTCATATGATTATGT+TGG - chr2_3:60450074-60450093 Msa0303290:intron 30.0%
!!! TACTCCACTTTTTAGTTTGT+TGG - chr2_3:60450269-60450288 Msa0303290:intron 30.0%
TCTTATGACAGATTTCACTT+GGG + chr2_3:60450507-60450526 None:intergenic 30.0%
TCTATCTGTTACATCATACT+AGG - chr2_3:60450552-60450571 Msa0303290:intron 30.0%
CTATCTGTTACATCATACTA+GGG - chr2_3:60450553-60450572 Msa0303290:intron 30.0%
!! TTGAGTTGCAAACTTTTTAC+AGG - chr2_3:60450613-60450632 Msa0303290:intron 30.0%
ATTTGCAAATGTTATGTGCA+TGG - chr2_3:60450660-60450679 Msa0303290:CDS 30.0%
TTTGCAAATGTTATGTGCAT+GGG - chr2_3:60450661-60450680 Msa0303290:CDS 30.0%
ATAAAGGTGGATATTACACT+AGG - chr2_3:60450694-60450713 Msa0303290:CDS 30.0%
GTAGTACAGATAACTAGAAA+AGG - chr2_3:60450725-60450744 Msa0303290:intron 30.0%
ACACATTTCTCATTTGTAGA+AGG - chr2_3:60450813-60450832 Msa0303290:intron 30.0%
CACATTTCTCATTTGTAGAA+GGG - chr2_3:60450814-60450833 Msa0303290:intron 30.0%
! TCGTACAAATTCTTTAGCTT+AGG - chr2_3:60450919-60450938 Msa0303290:intron 30.0%
CTGTTAAGATCTCTGTTATT+AGG - chr2_3:60451079-60451098 Msa0303290:intron 30.0%
TGAATAGTGGTTATAAGAAG+GGG + chr2_3:60451266-60451285 None:intergenic 30.0%
CTTGAATAGTGGTTATAAGA+AGG + chr2_3:60451268-60451287 None:intergenic 30.0%
ACTCATATTGGAAAGTGATA+TGG + chr2_3:60451291-60451310 None:intergenic 30.0%
TAATTGAATAAAAAGACGGG+AGG + chr2_3:60451507-60451526 None:intergenic 30.0%
TCATTATAAGAGGGAATAGA+TGG + chr2_3:60451637-60451656 None:intergenic 30.0%
!! TTTAAAAGTGTTGGAGGAAT+TGG + chr2_3:60451725-60451744 None:intergenic 30.0%
!! TTCTGATTTAAAAGTGTTGG+AGG + chr2_3:60451731-60451750 None:intergenic 30.0%
ATCAGAAAATCCAATGTCAA+TGG - chr2_3:60451744-60451763 Msa0303290:intron 30.0%
TCAATAATATACCAGTTAGG+GGG + chr2_3:60451814-60451833 None:intergenic 30.0%
GCTTCAATAATATACCAGTT+AGG + chr2_3:60451817-60451836 None:intergenic 30.0%
AAGTATTCAAATAGCACCTT+TGG + chr2_3:60451928-60451947 None:intergenic 30.0%
!! TAGTTGTTTTCATCGTGTTT+CGG - chr2_3:60451970-60451989 Msa0303290:intron 30.0%
! TTCATCTCATGTTTTTCCAA+AGG - chr2_3:60452081-60452100 Msa0303290:intron 30.0%
!! TAGAATGGCATTGATATTCA+GGG + chr2_3:60452170-60452189 None:intergenic 30.0%
!! TTAGAATGGCATTGATATTC+AGG + chr2_3:60452171-60452190 None:intergenic 30.0%
! TTTTCAACATTTTCACTAGG+TGG - chr2_3:60452337-60452356 Msa0303290:intron 30.0%
CTGATACTAACTATGCTATT+AGG + chr2_3:60452588-60452607 None:intergenic 30.0%
CTAATAGCATAGTTAGTATC+AGG - chr2_3:60452586-60452605 Msa0303290:intron 30.0%
! CTTATGTAGGTTGAAAACAT+GGG - chr2_3:60452899-60452918 Msa0303290:CDS 30.0%
! CTCTTCTAAAAGTTTGATTG+TGG - chr2_3:60452983-60453002 Msa0303290:intron 30.0%
TCTAAAAGTTTGATTGTGGT+TGG - chr2_3:60452987-60453006 Msa0303290:intron 30.0%
TGGCAAATTACAATCACATA+AGG - chr2_3:60453120-60453139 Msa0303290:intron 30.0%
! TTTATTCATCAACCTTTTCC+TGG + chr2_3:60453183-60453202 None:intergenic 30.0%
!! AAAAGGTTGATGAATAAAGC+TGG - chr2_3:60453185-60453204 Msa0303290:intron 30.0%
GAAATACTTTGATCACAGAT+TGG + chr2_3:60453324-60453343 None:intergenic 30.0%
!! AAAAAAAGCTGGTTCTTTTG+AGG + chr2_3:60453365-60453384 None:intergenic 30.0%
!!! AAAGAACCAGCTTTTTTTTC+TGG - chr2_3:60453367-60453386 Msa0303290:intron 30.0%
TCATTAAAAAATTGGGGGAA+AGG - chr2_3:60453436-60453455 Msa0303290:intron 30.0%
ACTTCAATCTAGGAAGATAT+TGG - chr2_3:60453476-60453495 Msa0303290:intron 30.0%
AGCCGGAAATTAATATTTGA+AGG + chr2_3:60453597-60453616 None:intergenic 30.0%
CAAAATTATCTCCTTGCTTA+AGG + chr2_3:60453670-60453689 None:intergenic 30.0%
! TAAGCAAGGAGATAATTTTG+TGG - chr2_3:60453670-60453689 Msa0303290:CDS 30.0%
! GATAATTTTGTGGTATGACA+TGG - chr2_3:60453680-60453699 Msa0303290:CDS 30.0%
!! TAAGTGTTACTTCAACTTCA+AGG - chr2_3:60453792-60453811 Msa0303290:intron 30.0%
TAAATGACAACTAGAAGCAA+AGG + chr2_3:60453835-60453854 None:intergenic 30.0%
TGACATCATATTACAACTGA+TGG + chr2_3:60454050-60454069 None:intergenic 30.0%
! ACAACAATTGAATGGATTCA+GGG - chr2_3:60454386-60454405 Msa0303290:five_prime_UTR 30.0%
!!! CTTCCGTGATTGTTTTAATC+AGG - chr2_3:60445723-60445742 Msa0303290:three_prime_UTR 35.0%
TGCAATTATGATGTGCACTA+TGG + chr2_3:60445903-60445922 None:intergenic 35.0%
TGAAATGCTAAAGGAGTTAC+TGG - chr2_3:60446032-60446051 Msa0303290:CDS 35.0%
! AGGAGTTACTGGTTAGAATT+CGG - chr2_3:60446043-60446062 Msa0303290:CDS 35.0%
TGATGTCTCAAAGAATAACG+GGG + chr2_3:60446182-60446201 None:intergenic 35.0%
TCCCAATACTGCAAATTAGA+AGG + chr2_3:60446248-60446267 None:intergenic 35.0%
ATTGTTAAAAGCCAAGGCAT+TGG - chr2_3:60446274-60446293 Msa0303290:intron 35.0%
! TTGTTAAAAGCCAAGGCATT+GGG - chr2_3:60446275-60446294 Msa0303290:intron 35.0%
CAATTCAGACATATGTTCCT+TGG - chr2_3:60446306-60446325 Msa0303290:intron 35.0%
AGCTAACCTGCACATATATA+TGG + chr2_3:60446443-60446462 None:intergenic 35.0%
TAAAAGCTCAGTGGTAAAGT+GGG + chr2_3:60446490-60446509 None:intergenic 35.0%
CAAACAAACTAAAAGCTCAG+TGG + chr2_3:60446499-60446518 None:intergenic 35.0%
!!! CACTGAGCTTTTAGTTTGTT+TGG - chr2_3:60446497-60446516 Msa0303290:intron 35.0%
ACATACATTATTCACTGCCA+TGG + chr2_3:60446553-60446572 None:intergenic 35.0%
CAACCATCCAAATGAACTTT+AGG + chr2_3:60446721-60446740 None:intergenic 35.0%
!! AAGATCATTTGGCTTGCATA+TGG - chr2_3:60446894-60446913 Msa0303290:CDS 35.0%
CAATGCAGATGGAAATTGTA+AGG + chr2_3:60447005-60447024 None:intergenic 35.0%
CTTACAATTTCCATCTGCAT+TGG - chr2_3:60447003-60447022 Msa0303290:intron 35.0%
AATATCAACACCAATGCAGA+TGG + chr2_3:60447016-60447035 None:intergenic 35.0%
ATATATTTCAGAGTGGGACT+GGG - chr2_3:60447083-60447102 Msa0303290:CDS 35.0%
!!! ATGATCTTGGTTTTGGAGTT+GGG + chr2_3:60447140-60447159 None:intergenic 35.0%
!! TGATCCTGCTTTTCTTAAAC+TGG - chr2_3:60447161-60447180 Msa0303290:intron 35.0%
CATACCAGTTTAAGAAAAGC+AGG + chr2_3:60447168-60447187 None:intergenic 35.0%
TTATGCTAACAAATGCCCTA+AGG - chr2_3:60447313-60447332 Msa0303290:intron 35.0%
TATGCTAACAAATGCCCTAA+GGG - chr2_3:60447314-60447333 Msa0303290:intron 35.0%
AAAGAATGCTCTTAGGGTAT+TGG + chr2_3:60447465-60447484 None:intergenic 35.0%
!! CCTTTGGGGTAAATAACTAA+AGG + chr2_3:60447496-60447515 None:intergenic 35.0%
CCTTTAGTTATTTACCCCAA+AGG - chr2_3:60447493-60447512 Msa0303290:intron 35.0%
GTTATTTACCCCAAAGGAAA+AGG - chr2_3:60447499-60447518 Msa0303290:intron 35.0%
! AAAGTTCACCTTTTCCTTTG+GGG + chr2_3:60447510-60447529 None:intergenic 35.0%
! CAAAGTTCACCTTTTCCTTT+GGG + chr2_3:60447511-60447530 None:intergenic 35.0%
! ACAAAGTTCACCTTTTCCTT+TGG + chr2_3:60447512-60447531 None:intergenic 35.0%
! GAAAAGGTGAACTTTGTTTG+TGG - chr2_3:60447515-60447534 Msa0303290:intron 35.0%
!!! GGATGTTTTGGTGTTTTACA+TGG - chr2_3:60447549-60447568 Msa0303290:intron 35.0%
!! CATATGCAGATGTTTTCAAG+CGG + chr2_3:60447674-60447693 None:intergenic 35.0%
!! TGGTATTTCAGGTTGAAAGA+TGG - chr2_3:60447747-60447766 Msa0303290:intron 35.0%
!! TATTTCAGGTTGAAAGATGG+TGG - chr2_3:60447750-60447769 Msa0303290:intron 35.0%
!! ATTTCAGGTTGAAAGATGGT+GGG - chr2_3:60447751-60447770 Msa0303290:intron 35.0%
! GGTTGATTCTATCTGATTGA+TGG - chr2_3:60447862-60447881 Msa0303290:intron 35.0%
!! TTTCTGAAATCAGAACTGAC+AGG + chr2_3:60447927-60447946 None:intergenic 35.0%
TATTTCATATGATGTGGCAG+AGG - chr2_3:60448043-60448062 Msa0303290:intron 35.0%
TGATAGCAATCTTAATGCAC+TGG + chr2_3:60448142-60448161 None:intergenic 35.0%
! AAGACTCGAAAAAGTACAAC+AGG - chr2_3:60448166-60448185 Msa0303290:intron 35.0%
TGTTGTGATTTCCTAAATGC+TGG - chr2_3:60448304-60448323 Msa0303290:CDS 35.0%
ACACAGATTGAGAATGAGTA+TGG - chr2_3:60448460-60448479 Msa0303290:intron 35.0%
GAGAATGAGTATGGTTCTTA+TGG - chr2_3:60448469-60448488 Msa0303290:intron 35.0%
!!! TTTTTGAAGCCTATCTCTCA+TGG - chr2_3:60448576-60448595 Msa0303290:intron 35.0%
GTTATCCCTATTTGAAAAGC+AGG - chr2_3:60448853-60448872 Msa0303290:intron 35.0%
TATCCCTATTTGAAAAGCAG+GGG - chr2_3:60448855-60448874 Msa0303290:intron 35.0%
!! TTTGTTATTACTTGGCCCAT+TGG + chr2_3:60448889-60448908 None:intergenic 35.0%
ATCGCATCTTAGCACAAAAA+AGG - chr2_3:60448928-60448947 Msa0303290:intron 35.0%
AGAACTTGACTTCATGTTTG+TGG - chr2_3:60448979-60448998 Msa0303290:intron 35.0%
GAGATGTGCAATATTTATGG+TGG - chr2_3:60449228-60449247 Msa0303290:intron 35.0%
! GTGGCTCATTTTGTTACATT+TGG - chr2_3:60449490-60449509 Msa0303290:intron 35.0%
! GGCTCATTTTGTTACATTTG+GGG - chr2_3:60449492-60449511 Msa0303290:intron 35.0%
! GCTCATTTTGTTACATTTGG+GGG - chr2_3:60449493-60449512 Msa0303290:intron 35.0%
TATGGTCAAAACAATGGGTA+TGG + chr2_3:60449579-60449598 None:intergenic 35.0%
TGTAACTTGAATATAGGCCA+AGG + chr2_3:60449666-60449685 None:intergenic 35.0%
! GCCTATATTCAAGTTACAGA+AGG - chr2_3:60449668-60449687 Msa0303290:intron 35.0%
! CTTATCAGCGAATTTTACAC+TGG - chr2_3:60449789-60449808 Msa0303290:intron 35.0%
CAAAAGGGTCAATCATAATG+CGG + chr2_3:60449954-60449973 None:intergenic 35.0%
! TGGGTCTTCTAATTTTCAGA+TGG - chr2_3:60449977-60449996 Msa0303290:CDS 35.0%
ATGCATACCACAATTCACAA+TGG + chr2_3:60450127-60450146 None:intergenic 35.0%
GCAAGTACTCACAAGAAAAA+GGG + chr2_3:60450316-60450335 None:intergenic 35.0%
AGCAAGTACTCACAAGAAAA+AGG + chr2_3:60450317-60450336 None:intergenic 35.0%
!!! TGAAAACATGTTTTGGGGTA+AGG + chr2_3:60450343-60450362 None:intergenic 35.0%
GAAGATGACATCCATATCAA+TGG + chr2_3:60450460-60450479 None:intergenic 35.0%
! TGGATGTCATCTTCTAAGAA+AGG - chr2_3:60450466-60450485 Msa0303290:intron 35.0%
! GGATGTCATCTTCTAAGAAA+GGG - chr2_3:60450467-60450486 Msa0303290:intron 35.0%
CTCTTATGACAGATTTCACT+TGG + chr2_3:60450508-60450527 None:intergenic 35.0%
! GCAAACTTTTTACAGGATAC+CGG - chr2_3:60450620-60450639 Msa0303290:intron 35.0%
!!! ATTTTTTGCAATCATGGTGC+CGG + chr2_3:60450642-60450661 None:intergenic 35.0%
! CATGGGTTACTGATCAATAA+AGG - chr2_3:60450678-60450697 Msa0303290:CDS 35.0%
TGGATATTACACTAGGAAGA+AGG - chr2_3:60450701-60450720 Msa0303290:intron 35.0%
GGATATTACACTAGGAAGAA+GGG - chr2_3:60450702-60450721 Msa0303290:intron 35.0%
GATATTACACTAGGAAGAAG+GGG - chr2_3:60450703-60450722 Msa0303290:intron 35.0%
TCTAGTTGAGACAAATAGGA+AGG - chr2_3:60450749-60450768 Msa0303290:intron 35.0%
! CAGAATGCTTTATTACTCAG+AGG + chr2_3:60450884-60450903 None:intergenic 35.0%
AAGGGGAAATTCTTACACTA+GGG + chr2_3:60451249-60451268 None:intergenic 35.0%
AAGTGATATGGCTTGAATAG+TGG + chr2_3:60451279-60451298 None:intergenic 35.0%
GAGAGTCTTGAAACTCATAT+TGG + chr2_3:60451303-60451322 None:intergenic 35.0%
ATACTTTAACCACTTTGTGC+CGG - chr2_3:60451405-60451424 Msa0303290:intron 35.0%
AATATGTTTCAGCAATTCGG+AGG - chr2_3:60451581-60451600 Msa0303290:intron 35.0%
ATATGTTTCAGCAATTCGGA+GGG - chr2_3:60451582-60451601 Msa0303290:intron 35.0%
!!! ATGTGTGTTCCTCAGTTTTT+TGG - chr2_3:60451844-60451863 Msa0303290:intron 35.0%
AAGAATCTTGTCCATACCAA+AGG - chr2_3:60451909-60451928 Msa0303290:intron 35.0%
TTCAAATAGCACCTTTGGTA+TGG + chr2_3:60451923-60451942 None:intergenic 35.0%
TATTAGACTTGTGAATGTGC+AGG - chr2_3:60452038-60452057 Msa0303290:intron 35.0%
! TCTCATGTTTTTCCAAAGGA+AGG - chr2_3:60452085-60452104 Msa0303290:intron 35.0%
! CTCATGTTTTTCCAAAGGAA+GGG - chr2_3:60452086-60452105 Msa0303290:intron 35.0%
! TCATGTTTTTCCAAAGGAAG+GGG - chr2_3:60452087-60452106 Msa0303290:intron 35.0%
! TTGGTTAGCTATGACTATGT+AGG - chr2_3:60452717-60452736 Msa0303290:intron 35.0%
! GTTTTCAACCTACATAAGGT+GGG + chr2_3:60452897-60452916 None:intergenic 35.0%
! TGTTTTCAACCTACATAAGG+TGG + chr2_3:60452898-60452917 None:intergenic 35.0%
! CCATGTTTTCAACCTACATA+AGG + chr2_3:60452901-60452920 None:intergenic 35.0%
! CCTTATGTAGGTTGAAAACA+TGG - chr2_3:60452898-60452917 Msa0303290:CDS 35.0%
AACATGGGTCGTGTAAATTA+TGG - chr2_3:60452914-60452933 Msa0303290:intron 35.0%
ACATGGGTCGTGTAAATTAT+GGG - chr2_3:60452915-60452934 Msa0303290:intron 35.0%
CATTCTGTCTTCTGTTTATC+TGG - chr2_3:60453037-60453056 Msa0303290:intron 35.0%
TGTCTTCTGTTTATCTGGAT+GGG - chr2_3:60453042-60453061 Msa0303290:intron 35.0%
TTAGATTGTGCAGAGGAATA+GGG + chr2_3:60453094-60453113 None:intergenic 35.0%
TTTAGATTGTGCAGAGGAAT+AGG + chr2_3:60453095-60453114 None:intergenic 35.0%
AAATATCAACCTCCAGGAAA+AGG - chr2_3:60453168-60453187 Msa0303290:intron 35.0%
GGTATGTGCCAAATTACATA+TGG - chr2_3:60453206-60453225 Msa0303290:intron 35.0%
ATGCTCAATCATCGTTTCAT+TGG - chr2_3:60453278-60453297 Msa0303290:intron 35.0%
AAGTGTCCAGAAAAAAAAGC+TGG + chr2_3:60453376-60453395 None:intergenic 35.0%
TGATAAAACAAGTCAGGTCA+AGG - chr2_3:60453402-60453421 Msa0303290:intron 35.0%
!! GTGCTTGACTTTTGAAAACA+TGG - chr2_3:60454077-60454096 Msa0303290:intron 35.0%
AAAACATGGAGAGAAGATGT+AGG - chr2_3:60454091-60454110 Msa0303290:intron 35.0%
ACGACAATGTCTATAACCAA+AGG - chr2_3:60454300-60454319 Msa0303290:five_prime_UTR 35.0%
TGTCACACAAGAATAGTTGT+CGG + chr2_3:60454369-60454388 None:intergenic 35.0%
CTTGTGTGACAACAATTGAA+TGG - chr2_3:60454378-60454397 Msa0303290:five_prime_UTR 35.0%
! GACAACAATTGAATGGATTC+AGG - chr2_3:60454385-60454404 Msa0303290:five_prime_UTR 35.0%
!! GTTTGGATTGGCTTATCTAC+TGG + chr2_3:60445589-60445608 None:intergenic 40.0%
GTAGATAAGCCAATCCAAAC+AGG - chr2_3:60445589-60445608 Msa0303290:three_prime_UTR 40.0%
! GGAAAGATGGTGAACCTTTT+CGG - chr2_3:60445782-60445801 Msa0303290:three_prime_UTR 40.0%
!!! TTATTTTCGAGTGCATCCTG+AGG - chr2_3:60445825-60445844 Msa0303290:three_prime_UTR 40.0%
GTTAGCAAGATGTATACCTC+AGG + chr2_3:60445844-60445863 None:intergenic 40.0%
! GACTTAGCTGTCATTTCATC+TGG - chr2_3:60446110-60446129 Msa0303290:intron 40.0%
ACCTGCACATATATATGGTC+CGG + chr2_3:60446438-60446457 None:intergenic 40.0%
CTAAAAGCTCAGTGGTAAAG+TGG + chr2_3:60446491-60446510 None:intergenic 40.0%
!! GCTGATTTTCATGTATGCCA+TGG - chr2_3:60446533-60446552 Msa0303290:CDS 40.0%
! TTTAGGAAATCTGGCTTCAC+AGG + chr2_3:60446704-60446723 None:intergenic 40.0%
! GGCTTCCCATTATCATCTTT+TGG - chr2_3:60446840-60446859 Msa0303290:CDS 40.0%
GATATATTTCAGAGTGGGAC+TGG - chr2_3:60447082-60447101 Msa0303290:CDS 40.0%
TATATTTCAGAGTGGGACTG+GGG - chr2_3:60447084-60447103 Msa0303290:CDS 40.0%
!!! GATGATCTTGGTTTTGGAGT+TGG + chr2_3:60447141-60447160 None:intergenic 40.0%
! GGATCAGATGATCTTGGTTT+TGG + chr2_3:60447147-60447166 None:intergenic 40.0%
AAAGCAGGATCAGATGATCT+TGG + chr2_3:60447153-60447172 None:intergenic 40.0%
TTCCTTAACAAGTGCCCTTA+GGG + chr2_3:60447331-60447350 None:intergenic 40.0%
TTTCCTTAACAAGTGCCCTT+AGG + chr2_3:60447332-60447351 None:intergenic 40.0%
!! CTCTTAGGGTATTGGTTAAG+AGG + chr2_3:60447457-60447476 None:intergenic 40.0%
TTGTTTGTGGCTTCACTGTA+AGG - chr2_3:60447528-60447547 Msa0303290:intron 40.0%
! GCTTCACTGTAAGGATGTTT+TGG - chr2_3:60447537-60447556 Msa0303290:intron 40.0%
!! TTTCAGGTTGAAAGATGGTG+GGG - chr2_3:60447752-60447771 Msa0303290:intron 40.0%
!! GAGGAACAAATTTTGGAAGC+AGG + chr2_3:60447781-60447800 None:intergenic 40.0%
GTTCCTCTCCTATATGACAA+CGG - chr2_3:60447794-60447813 Msa0303290:intron 40.0%
AGGCCCTATAATAATGGTTC+AGG - chr2_3:60447817-60447836 Msa0303290:intron 40.0%
TGTTGTATGCAGAACTAGAC+TGG - chr2_3:60448109-60448128 Msa0303290:intron 40.0%
ATAGATAAGAGGGGAGTAGA+GGG + chr2_3:60448672-60448691 None:intergenic 40.0%
TATAGATAAGAGGGGAGTAG+AGG + chr2_3:60448673-60448692 None:intergenic 40.0%
ATCGGCTAGACATATGGTTA+AGG - chr2_3:60448742-60448761 Msa0303290:intron 40.0%
ATGGCCCAAGTATAAAGACT+TGG - chr2_3:60448796-60448815 Msa0303290:intron 40.0%
TGGCCCAAGTATAAAGACTT+GGG - chr2_3:60448797-60448816 Msa0303290:intron 40.0%
TAGGGATAACTCAACCACAA+GGG + chr2_3:60448843-60448862 None:intergenic 40.0%
ATAGGGATAACTCAACCACA+AGG + chr2_3:60448844-60448863 None:intergenic 40.0%
ATCCCTATTTGAAAAGCAGG+GGG - chr2_3:60448856-60448875 Msa0303290:intron 40.0%
GCAATATTTATGGTGGTCAG+AGG - chr2_3:60449235-60449254 Msa0303290:intron 40.0%
TCTGTAGTGTATCTGACAAC+CGG + chr2_3:60449297-60449316 None:intergenic 40.0%
GTTGTCAGATACACTACAGA+TGG - chr2_3:60449297-60449316 Msa0303290:intron 40.0%
TCAGATACACTACAGATGGA+GGG - chr2_3:60449301-60449320 Msa0303290:intron 40.0%
TCCAGGGAAAATCTTGAGAA+AGG - chr2_3:60449324-60449343 Msa0303290:intron 40.0%
! TCCTTTCTCAAGATTTTCCC+TGG + chr2_3:60449328-60449347 None:intergenic 40.0%
CTTGAGAAAGGAACTATTCG+TGG - chr2_3:60449336-60449355 Msa0303290:intron 40.0%
GTGAAGTCAACAGCTACAAA+AGG + chr2_3:60449630-60449649 None:intergenic 40.0%
! ACAAAGGTGGTGATTTTCCT+GGG + chr2_3:60449704-60449723 None:intergenic 40.0%
TAAACTTACGTCGACAAAGG+TGG + chr2_3:60449717-60449736 None:intergenic 40.0%
! TTCAAACGGTACAAAGGCAT+AGG + chr2_3:60449929-60449948 None:intergenic 40.0%
! TCTAATTTTCAGATGGCGCA+TGG - chr2_3:60449984-60450003 Msa0303290:CDS 40.0%
GCATCTTCCATTGTGAATTG+TGG - chr2_3:60450117-60450136 Msa0303290:CDS 40.0%
CAGAAATAGAAATCCAGCTC+AGG + chr2_3:60450414-60450433 None:intergenic 40.0%
! TTAGTGGTTCAAGGTCTTGT+GGG + chr2_3:60450580-60450599 None:intergenic 40.0%
ATTAGTGGTTCAAGGTCTTG+TGG + chr2_3:60450581-60450600 None:intergenic 40.0%
GGGTTACTGATCAATAAAGG+TGG - chr2_3:60450681-60450700 Msa0303290:CDS 40.0%
AGGGTCTAGTTGAGACAAAT+AGG - chr2_3:60450745-60450764 Msa0303290:intron 40.0%
TGTAGAAGGGAATATTGCCA+TGG - chr2_3:60450827-60450846 Msa0303290:intron 40.0%
ATTACACATGCAGCTTCTAC+AGG + chr2_3:60450972-60450991 None:intergenic 40.0%
! TACACTAGGGGATAGCTTTT+GGG + chr2_3:60451236-60451255 None:intergenic 40.0%
! TTACACTAGGGGATAGCTTT+TGG + chr2_3:60451237-60451256 None:intergenic 40.0%
AGGGGAAATTCTTACACTAG+GGG + chr2_3:60451248-60451267 None:intergenic 40.0%
GAAGGGGAAATTCTTACACT+AGG + chr2_3:60451250-60451269 None:intergenic 40.0%
! ATTTGGGGCATGAAGTTTGA+AGG - chr2_3:60451351-60451370 Msa0303290:intron 40.0%
! TTTTATATGCCGGCACAAAG+TGG + chr2_3:60451417-60451436 None:intergenic 40.0%
TAAGAGGGAATAGATGGAAG+AGG + chr2_3:60451631-60451650 None:intergenic 40.0%
GACCAATCCACTTACAAAGA+CGG - chr2_3:60451671-60451690 Msa0303290:intron 40.0%
AAGAAGACCGTCTTTGTAAG+TGG + chr2_3:60451681-60451700 None:intergenic 40.0%
TCCAATGTCAATGGAGAATG+TGG - chr2_3:60451753-60451772 Msa0303290:intron 40.0%
CCAATGTCAATGGAGAATGT+GGG - chr2_3:60451754-60451773 Msa0303290:intron 40.0%
GGTACAAGACCAACTTATGT+TGG - chr2_3:60452108-60452127 Msa0303290:intron 40.0%
ACCAACTTATGTTGGTACTG+TGG - chr2_3:60452116-60452135 Msa0303290:intron 40.0%
TCCACAGTACCAACATAAGT+TGG + chr2_3:60452120-60452139 None:intergenic 40.0%
ATGTTGGTACTGTGGAAAGA+TGG - chr2_3:60452124-60452143 Msa0303290:intron 40.0%
GCACTTGAGCTGAAATTTCA+AGG - chr2_3:60452296-60452315 Msa0303290:intron 40.0%
TACCTTATCCCCACAATGAA+AGG + chr2_3:60452386-60452405 None:intergenic 40.0%
CTATTCTTCCCACCTTATGT+AGG - chr2_3:60452886-60452905 Msa0303290:CDS 40.0%
ACCTTCCTATCGAAGATGAA+AGG + chr2_3:60452941-60452960 None:intergenic 40.0%
CGATAGGAAGGTAAAAGTCA+TGG - chr2_3:60452949-60452968 Msa0303290:intron 40.0%
ATCTTTGTCGCAACTTCTAC+AGG - chr2_3:60453013-60453032 Msa0303290:intron 40.0%
TCTTTGTCGCAACTTCTACA+GGG - chr2_3:60453014-60453033 Msa0303290:intron 40.0%
CTGTCTTCTGTTTATCTGGA+TGG - chr2_3:60453041-60453060 Msa0303290:intron 40.0%
TGGATGGGAATAGAGTACAA+GGG - chr2_3:60453057-60453076 Msa0303290:intron 40.0%
ACTTCGTTTAGATTGTGCAG+AGG + chr2_3:60453101-60453120 None:intergenic 40.0%
TCTGCACAATCTAAACGAAG+TGG - chr2_3:60453100-60453119 Msa0303290:intron 40.0%
CAAGCTGCATATTCTGCATT+CGG - chr2_3:60453143-60453162 Msa0303290:intron 40.0%
! ATTCATCAACCTTTTCCTGG+AGG + chr2_3:60453180-60453199 None:intergenic 40.0%
CAATCTAGGAAGATATTGGC+CGG - chr2_3:60453480-60453499 Msa0303290:intron 40.0%
CCTCTCAACTATTAAAGAGC+CGG + chr2_3:60453614-60453633 None:intergenic 40.0%
TTATCTCCTTGCTTAAGGAC+TGG + chr2_3:60453665-60453684 None:intergenic 40.0%
ACCTTTGTAAACCAATGTGC+AGG - chr2_3:60453933-60453952 Msa0303290:intron 40.0%
!! ACCTGCACATTGGTTTACAA+AGG + chr2_3:60453937-60453956 None:intergenic 40.0%
!! ACTTCACATGTGGCTTTAGT+GGG - chr2_3:60454016-60454035 Msa0303290:intron 40.0%
! AGGTTTAGAGTTTACCCGTA+CGG - chr2_3:60454111-60454130 Msa0303290:intron 40.0%
GTTCGTAACAATAACCGTAC+GGG + chr2_3:60454128-60454147 None:intergenic 40.0%
GGTTCGTAACAATAACCGTA+CGG + chr2_3:60454129-60454148 None:intergenic 40.0%
ATCAGGCTTACCAAAGATTG+TGG - chr2_3:60454229-60454248 Msa0303290:CDS 40.0%
GACATACACACCACAATCTT+TGG + chr2_3:60454242-60454261 None:intergenic 40.0%
GAAAAATCCATAGCAGGAAG+AGG + chr2_3:60454342-60454361 None:intergenic 40.0%
GGAAGAGAAAAATCCATAGC+AGG + chr2_3:60454348-60454367 None:intergenic 40.0%
! GGTGAACCTTTTCGGATCAT+CGG - chr2_3:60445790-60445809 Msa0303290:three_prime_UTR 45.0%
GCAAAAGCAGAACGACAAAG+TGG - chr2_3:60446088-60446107 Msa0303290:intron 45.0%
!! ACCAGGAAAGCTCGTTTTTG+AGG - chr2_3:60446346-60446365 Msa0303290:CDS 45.0%
!! CCAGGAAAGCTCGTTTTTGA+GGG - chr2_3:60446347-60446366 Msa0303290:CDS 45.0%
CGAGTTTGTGACAAAGGTTG+AGG + chr2_3:60446394-60446413 None:intergenic 45.0%
GGAGATCGAGTTTGTGACAA+AGG + chr2_3:60446400-60446419 None:intergenic 45.0%
CAAACTCGATCTCCTTGTGA+TGG - chr2_3:60446406-60446425 Msa0303290:intron 45.0%
CCTGCACATATATATGGTCC+GGG + chr2_3:60446437-60446456 None:intergenic 45.0%
!!! TGGTTTTGGAGTTGGGTTCA+TGG + chr2_3:60447133-60447152 None:intergenic 45.0%
CAACGGAGGCCCTATAATAA+TGG - chr2_3:60447811-60447830 Msa0303290:intron 45.0%
TGCAGAACTAGACTGGTACA+AGG - chr2_3:60448116-60448135 Msa0303290:intron 45.0%
TAGCTAGTGTGATCAGGTGA+TGG + chr2_3:60448513-60448532 None:intergenic 45.0%
ACACTAGCTAGAGGTCATCT+CGG - chr2_3:60448523-60448542 Msa0303290:intron 45.0%
TAGATAAGAGGGGAGTAGAG+GGG + chr2_3:60448671-60448690 None:intergenic 45.0%
ACCATATGTCTAGCCGATGT+GGG + chr2_3:60448740-60448759 None:intergenic 45.0%
AACCATATGTCTAGCCGATG+TGG + chr2_3:60448741-60448760 None:intergenic 45.0%
AGGGATAACTCAACCACAAG+GGG + chr2_3:60448842-60448861 None:intergenic 45.0%
TCCCTATTTGAAAAGCAGGG+GGG - chr2_3:60448857-60448876 Msa0303290:intron 45.0%
CGATGTCAAGTTCCTACTTG+TGG + chr2_3:60448912-60448931 None:intergenic 45.0%
GTCAGATACACTACAGATGG+AGG - chr2_3:60449300-60449319 Msa0303290:intron 45.0%
TTAATGTTCGGAAGGAGGGA+GGG + chr2_3:60449455-60449474 None:intergenic 45.0%
ATTAATGTTCGGAAGGAGGG+AGG + chr2_3:60449456-60449475 None:intergenic 45.0%
!! GTAGCTGTTGACTTCACTAC+TGG - chr2_3:60449633-60449652 Msa0303290:intron 45.0%
! TCACTACTGGTGATGATCCT+TGG - chr2_3:60449646-60449665 Msa0303290:intron 45.0%
! CAAAGGTGGTGATTTTCCTG+GGG + chr2_3:60449703-60449722 None:intergenic 45.0%
! GACAAAGGTGGTGATTTTCC+TGG + chr2_3:60449705-60449724 None:intergenic 45.0%
! TCAGCGAATTTTACACTGGG+TGG - chr2_3:60449793-60449812 Msa0303290:intron 45.0%
! GCGGTTTTCAAACGGTACAA+AGG + chr2_3:60449935-60449954 None:intergenic 45.0%
! AATTTTCAGATGGCGCATGG+TGG - chr2_3:60449987-60450006 Msa0303290:CDS 45.0%
!! TAGATAATGGAAGCCTGAGC+TGG - chr2_3:60450398-60450417 Msa0303290:intron 45.0%
CATATCAATGGAATGCCCTC+GGG + chr2_3:60450448-60450467 None:intergenic 45.0%
CCATATCAATGGAATGCCCT+CGG + chr2_3:60450449-60450468 None:intergenic 45.0%
!! TTATTACTCAGAGGCGTCAG+AGG + chr2_3:60450875-60450894 None:intergenic 45.0%
! ACACTAGGGGATAGCTTTTG+GGG + chr2_3:60451235-60451254 None:intergenic 45.0%
ATGCCCAGAACCAAGTGTTA+GGG + chr2_3:60451333-60451352 None:intergenic 45.0%
AATGCCCAGAACCAAGTGTT+AGG + chr2_3:60451334-60451353 None:intergenic 45.0%
!! AACACTTGGTTCTGGGCATT+TGG - chr2_3:60451334-60451353 Msa0303290:intron 45.0%
!! ACACTTGGTTCTGGGCATTT+GGG - chr2_3:60451335-60451354 Msa0303290:intron 45.0%
! AAGAGGTGCAGAGCTATATC+GGG + chr2_3:60451614-60451633 None:intergenic 45.0%
! GAAGAGGTGCAGAGCTATAT+CGG + chr2_3:60451615-60451634 None:intergenic 45.0%
GACCGTCTTTGTAAGTGGAT+TGG + chr2_3:60451676-60451695 None:intergenic 45.0%
CCCACATTCTCCATTGACAT+TGG + chr2_3:60451757-60451776 None:intergenic 45.0%
ATGTCACTGAATACGAAGCG+AGG - chr2_3:60451878-60451897 Msa0303290:intron 45.0%
TATCCCCTTGCCTTTCATTG+TGG - chr2_3:60452373-60452392 Msa0303290:intron 45.0%
ATCCCCTTGCCTTTCATTGT+GGG - chr2_3:60452374-60452393 Msa0303290:intron 45.0%
ATCCCCACAATGAAAGGCAA+GGG + chr2_3:60452380-60452399 None:intergenic 45.0%
TATCCCCACAATGAAAGGCA+AGG + chr2_3:60452381-60452400 None:intergenic 45.0%
TGCCTTTCATTGTGGGGATA+AGG - chr2_3:60452381-60452400 Msa0303290:intron 45.0%
TTGTGGGGATAAGGTAGTAC+AGG - chr2_3:60452390-60452409 Msa0303290:intron 45.0%
TGTGGGGATAAGGTAGTACA+GGG - chr2_3:60452391-60452410 Msa0303290:intron 45.0%
AGTATCAGGAGTTGTGAAGC+TGG - chr2_3:60452633-60452652 Msa0303290:intron 45.0%
ATGGGCCTTTCATCTTCGAT+AGG - chr2_3:60452933-60452952 Msa0303290:intron 45.0%
GCCTTTCATCTTCGATAGGA+AGG - chr2_3:60452937-60452956 Msa0303290:intron 45.0%
CTGGATGGGAATAGAGTACA+AGG - chr2_3:60453056-60453075 Msa0303290:intron 45.0%
ATGGGAATAGAGTACAAGGG+TGG - chr2_3:60453060-60453079 Msa0303290:intron 45.0%
TCGGTGAAATATCAACCTCC+AGG - chr2_3:60453162-60453181 Msa0303290:intron 45.0%
CCGGCTCTTTAATAGTTGAG+AGG - chr2_3:60453611-60453630 Msa0303290:CDS 45.0%
CTCGAGTATTACCTGCACAT+TGG + chr2_3:60453947-60453966 None:intergenic 45.0%
TGTGCAGGTAATACTCGAGT+TGG - chr2_3:60453948-60453967 Msa0303290:intron 45.0%
ATCTCCAGATCCCAATCTTG+TGG - chr2_3:60453972-60453991 Msa0303290:intron 45.0%
ACTGTGTGCACCACAAGATT+GGG + chr2_3:60453985-60454004 None:intergenic 45.0%
AACTGTGTGCACCACAAGAT+TGG + chr2_3:60453986-60454005 None:intergenic 45.0%
AATCTTGTGGTGCACACAGT+TGG - chr2_3:60453985-60454004 Msa0303290:intron 45.0%
CTAAAGCCACATGTGAAGTC+TGG + chr2_3:60454015-60454034 None:intergenic 45.0%
!! GACTTCACATGTGGCTTTAG+TGG - chr2_3:60454015-60454034 Msa0303290:intron 45.0%
!! TATATATATATATATAAAGA+TGG - chr2_3:60452797-60452816 Msa0303290:intron 5.0%
AAAACGGCTAACGGCCTGTT+TGG + chr2_3:60445606-60445625 None:intergenic 50.0%
! GAACCTTTTCGGATCATCGG+TGG - chr2_3:60445793-60445812 Msa0303290:three_prime_UTR 50.0%
TCACCACCGATGATCCGAAA+AGG + chr2_3:60445799-60445818 None:intergenic 50.0%
TGTGTTCAAGCCCAATGCCT+TGG + chr2_3:60446288-60446307 None:intergenic 50.0%
! GCTGGTTCATGCAGATTCCA+AGG + chr2_3:60446326-60446345 None:intergenic 50.0%
AATCTGCATGAACCAGCACC+AGG - chr2_3:60446329-60446348 Msa0303290:intron 50.0%
AAAACGAGCTTTCCTGGTGC+TGG + chr2_3:60446344-60446363 None:intergenic 50.0%
CCCTCAAAAACGAGCTTTCC+TGG + chr2_3:60446350-60446369 None:intergenic 50.0%
CCCGGACCATATATATGTGC+AGG - chr2_3:60446434-60446453 Msa0303290:intron 50.0%
!! TGCCCTAAGGGCACTTGTTA+AGG - chr2_3:60447326-60447345 Msa0303290:intron 50.0%
CCTCCGTTGTCATATAGGAG+AGG + chr2_3:60447800-60447819 None:intergenic 50.0%
CCTCTCCTATATGACAACGG+AGG - chr2_3:60447797-60447816 Msa0303290:intron 50.0%
TAGGGCCTCCGTTGTCATAT+AGG + chr2_3:60447805-60447824 None:intergenic 50.0%
CACCTGATCACACTAGCTAG+AGG - chr2_3:60448514-60448533 Msa0303290:intron 50.0%
GACCTCTAGCTAGTGTGATC+AGG + chr2_3:60448519-60448538 None:intergenic 50.0%
CACTAGCTAGAGGTCATCTC+GGG - chr2_3:60448524-60448543 Msa0303290:intron 50.0%
AGATAAGAGGGGAGTAGAGG+GGG + chr2_3:60448670-60448689 None:intergenic 50.0%
! TCCCACATCGGCTAGACATA+TGG - chr2_3:60448736-60448755 Msa0303290:intron 50.0%
TCAACCACAAGGGGTAGCTT+GGG + chr2_3:60448833-60448852 None:intergenic 50.0%
!! GCCCCCCTGCTTTTCAAATA+GGG + chr2_3:60448861-60448880 None:intergenic 50.0%
ATTACTTGGCCCATTGGTGC+AGG + chr2_3:60448883-60448902 None:intergenic 50.0%
TTTGAGGGACCCCAAAAGCA+GGG + chr2_3:60449037-60449056 None:intergenic 50.0%
!! TTTTGAGGGACCCCAAAAGC+AGG + chr2_3:60449038-60449057 None:intergenic 50.0%
! CGTGGAGCTACTGTCTTTTC+AGG - chr2_3:60449354-60449373 Msa0303290:intron 50.0%
ACACTGGGTGGCTTACACAT+TGG - chr2_3:60449805-60449824 Msa0303290:CDS 50.0%
CACTGGGTGGCTTACACATT+GGG - chr2_3:60449806-60449825 Msa0303290:CDS 50.0%
ACTGGGTGGCTTACACATTG+GGG - chr2_3:60449807-60449826 Msa0303290:CDS 50.0%
!! TGTGGAATCAGCATCGGTCT+TGG + chr2_3:60449844-60449863 None:intergenic 50.0%
AGCTGCTGTGGAATCAGCAT+CGG + chr2_3:60449850-60449869 None:intergenic 50.0%
TTCTTCAAGAGCAGCTGCTG+TGG + chr2_3:60449862-60449881 None:intergenic 50.0%
GCGCATGGTGGTTCAAACTT+TGG - chr2_3:60449999-60450018 Msa0303290:CDS 50.0%
AGCAAATACCGGTGCAGATG+AGG - chr2_3:60450034-60450053 Msa0303290:intron 50.0%
ATAGTCAGCCTCATCTGCAC+CGG + chr2_3:60450045-60450064 None:intergenic 50.0%
TTCTGAATCCTCTTCACCCG+AGG - chr2_3:60450429-60450448 Msa0303290:intron 50.0%
TCTGAATCCTCTTCACCCGA+GGG - chr2_3:60450430-60450449 Msa0303290:intron 50.0%
!! CCGAGGGCATTCCATTGATA+TGG - chr2_3:60450446-60450465 Msa0303290:intron 50.0%
AAATAGGAAGGCCCCCAAGA+AGG - chr2_3:60450761-60450780 Msa0303290:intron 50.0%
AGTCAAAGCAAGCTCTGCCA+TGG + chr2_3:60450847-60450866 None:intergenic 50.0%
GATCTCTGTTATTAGGCCGC+TGG - chr2_3:60451086-60451105 Msa0303290:intron 50.0%
AGGACTTGTCATCTGATGCG+TGG + chr2_3:60451119-60451138 None:intergenic 50.0%
ATGACAAGTCCTACGCGTGA+GGG - chr2_3:60451127-60451146 Msa0303290:intron 50.0%
TGCCCAGAACCAAGTGTTAG+GGG + chr2_3:60451332-60451351 None:intergenic 50.0%
!! CACTTGGTTCTGGGCATTTG+GGG - chr2_3:60451336-60451355 Msa0303290:intron 50.0%
ACTGAATACGAAGCGAGGAG+AGG - chr2_3:60451883-60451902 Msa0303290:intron 50.0%
CTGAATACGAAGCGAGGAGA+GGG - chr2_3:60451884-60451903 Msa0303290:intron 50.0%
TGAATACGAAGCGAGGAGAG+GGG - chr2_3:60451885-60451904 Msa0303290:intron 50.0%
!! TGGTCTTGTACCCCTTCCTT+TGG + chr2_3:60452100-60452119 None:intergenic 50.0%
TCCCCTTGCCTTTCATTGTG+GGG - chr2_3:60452375-60452394 Msa0303290:intron 50.0%
TCCCCACAATGAAAGGCAAG+GGG + chr2_3:60452379-60452398 None:intergenic 50.0%
TGCACCACAAGATTGGGATC+TGG + chr2_3:60453979-60453998 None:intergenic 50.0%
!! TCAGCTCGTGATGGATCCTT+TGG + chr2_3:60454319-60454338 None:intergenic 50.0%
GGCTAACGGCCTGTTTGGAT+TGG + chr2_3:60445601-60445620 None:intergenic 55.0%
CTCCTTGTGATGGTTCGACC+CGG - chr2_3:60446416-60446435 Msa0303290:intron 55.0%
CTGGCTTCACAGGACTTTGC+AGG + chr2_3:60446694-60446713 None:intergenic 55.0%
ATTTCAGAGTGGGACTGGGG+TGG - chr2_3:60447087-60447106 Msa0303290:CDS 55.0%
ACTGGGGTGGTATCCCAAGT+TGG - chr2_3:60447100-60447119 Msa0303290:intron 55.0%
GATAAGAGGGGAGTAGAGGG+GGG + chr2_3:60448669-60448688 None:intergenic 55.0%
CTCAACCACAAGGGGTAGCT+TGG + chr2_3:60448834-60448853 None:intergenic 55.0%
!! GGCCCCCCTGCTTTTCAAAT+AGG + chr2_3:60448862-60448881 None:intergenic 55.0%
!! GTACAAGCCCCCCTGCTTTT+GGG - chr2_3:60449024-60449043 Msa0303290:intron 55.0%
!! TACAAGCCCCCCTGCTTTTG+GGG - chr2_3:60449025-60449044 Msa0303290:intron 55.0%
TTGAGGGACCCCAAAAGCAG+GGG + chr2_3:60449036-60449055 None:intergenic 55.0%
ACACTACAGATGGAGGGTCC+AGG - chr2_3:60449307-60449326 Msa0303290:intron 55.0%
CACTACAGATGGAGGGTCCA+GGG - chr2_3:60449308-60449327 Msa0303290:intron 55.0%
GAGGGAGGGAGAGAAAGATC+AGG + chr2_3:60449441-60449460 None:intergenic 55.0%
CAGAAGGAGTTCAATGCCCC+AGG - chr2_3:60449684-60449703 Msa0303290:intron 55.0%
ATATGCAGGATGCCCCGATC+AGG - chr2_3:60450171-60450190 Msa0303290:CDS 55.0%
TATGCAGGATGCCCCGATCA+GGG - chr2_3:60450172-60450191 Msa0303290:CDS 55.0%
ACGTCACCAGCTTCCCTGAT+CGG + chr2_3:60450188-60450207 None:intergenic 55.0%
AAACACGCCCCTCCTTCTTG+GGG + chr2_3:60450776-60450795 None:intergenic 55.0%
CAAACACGCCCCTCCTTCTT+GGG + chr2_3:60450777-60450796 None:intergenic 55.0%
GATGCGTGGACAAATGCCAG+CGG + chr2_3:60451105-60451124 None:intergenic 55.0%
GATGACAAGTCCTACGCGTG+AGG - chr2_3:60451126-60451145 Msa0303290:intron 55.0%
TCAACACATCCCTCACGCGT+AGG + chr2_3:60451139-60451158 None:intergenic 55.0%
CTCAACACCCCCCTAACACT+TGG - chr2_3:60451320-60451339 Msa0303290:intron 55.0%
ACCCCCCTAACACTTGGTTC+TGG - chr2_3:60451326-60451345 Msa0303290:intron 55.0%
CCCAGAACCAAGTGTTAGGG+GGG + chr2_3:60451330-60451349 None:intergenic 55.0%
! CCCCCCTAACACTTGGTTCT+GGG - chr2_3:60451327-60451346 Msa0303290:intron 55.0%
GCCCAGAACCAAGTGTTAGG+GGG + chr2_3:60451331-60451350 None:intergenic 55.0%
GTCAATGGAGAATGTGGGCC+AGG - chr2_3:60451759-60451778 Msa0303290:intron 55.0%
GATAGTGCAAGCCCCCTAAC+TGG - chr2_3:60451800-60451819 Msa0303290:intron 55.0%
GAATACGAAGCGAGGAGAGG+GGG - chr2_3:60451886-60451905 Msa0303290:intron 55.0%
GGAACGTAGAGGTTGCACTG+TGG + chr2_3:60453638-60453657 None:intergenic 55.0%
CCTTGCTTAAGGACTGGAGC+AGG + chr2_3:60453659-60453678 None:intergenic 55.0%
CCTGCTCCAGTCCTTAAGCA+AGG - chr2_3:60453656-60453675 Msa0303290:CDS 55.0%
GGTGAGCCAGACTTCACATG+TGG - chr2_3:60454006-60454025 Msa0303290:intron 55.0%
AGGAAGAGGTCAGCTCGTGA+TGG + chr2_3:60454328-60454347 None:intergenic 55.0%
GAGCTGACCTCTTCCTGCTA+TGG - chr2_3:60454332-60454351 Msa0303290:five_prime_UTR 55.0%
GTCCGGGTCGAACCATCACA+AGG + chr2_3:60446421-60446440 None:intergenic 60.0%
AGCTAGAGGTCATCTCGGGC+AGG - chr2_3:60448528-60448547 Msa0303290:intron 60.0%
ACAAGGGGTAGCTTGGGTGG+AGG + chr2_3:60448827-60448846 None:intergenic 60.0%
TCCACCCAAGCTACCCCTTG+TGG - chr2_3:60448826-60448845 Msa0303290:intron 60.0%
ACCACAAGGGGTAGCTTGGG+TGG + chr2_3:60448830-60448849 None:intergenic 60.0%
AGCAGGGGGGCTTGTACCAA+TGG + chr2_3:60449021-60449040 None:intergenic 60.0%
! GGTACAAGCCCCCCTGCTTT+TGG - chr2_3:60449023-60449042 Msa0303290:intron 60.0%
TGAGGGACCCCAAAAGCAGG+GGG + chr2_3:60449035-60449054 None:intergenic 60.0%
GTCACCAGCTTCCCTGATCG+GGG + chr2_3:60450186-60450205 None:intergenic 60.0%
CGTCACCAGCTTCCCTGATC+GGG + chr2_3:60450187-60450206 None:intergenic 60.0%
TGGAATGCCCTCGGGTGAAG+AGG + chr2_3:60450440-60450459 None:intergenic 60.0%
TAGGAAGGCCCCCAAGAAGG+AGG - chr2_3:60450764-60450783 Msa0303290:intron 60.0%
AGGAAGGCCCCCAAGAAGGA+GGG - chr2_3:60450765-60450784 Msa0303290:intron 60.0%
AACACGCCCCTCCTTCTTGG+GGG + chr2_3:60450775-60450794 None:intergenic 60.0%
CCAAACACGCCCCTCCTTCT+TGG + chr2_3:60450778-60450797 None:intergenic 60.0%
! CCAAGAAGGAGGGGCGTGTT+TGG - chr2_3:60450775-60450794 Msa0303290:intron 60.0%
GGACTGGAGCAGGAACGTAG+AGG + chr2_3:60453649-60453668 None:intergenic 60.0%
GAGGGACCCCAAAAGCAGGG+GGG + chr2_3:60449034-60449053 None:intergenic 65.0%
GATGCCCCGATCAGGGAAGC+TGG - chr2_3:60450179-60450198 Msa0303290:CDS 65.0%
GGAAGGCCCCCAAGAAGGAG+GGG - chr2_3:60450766-60450785 Msa0303290:intron 65.0%
AGCAGGGGGGCCTGCACCAA+TGG - chr2_3:60448870-60448889 Msa0303290:intron 70.0%
GCAGGGGGGCCTGCACCAAT+GGG - chr2_3:60448871-60448890 Msa0303290:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 60445573 60454450 60445573 ID=Msa0303290;Name=Msa0303290
chr2_3 mRNA 60445573 60454450 60445573 ID=Msa0303290-mRNA-1;Parent=Msa0303290;Name=Msa0303290-mRNA-1;_AED=0.12;_eAED=0.12;_QI=202|0.88|0.88|1|1|1|18|391|603
chr2_3 exon 60445573 60446068 60445573 ID=Msa0303290-mRNA-1:exon:19716;Parent=Msa0303290-mRNA-1
chr2_3 exon 60446332 60446397 60446332 ID=Msa0303290-mRNA-1:exon:19715;Parent=Msa0303290-mRNA-1
chr2_3 exon 60446522 60446667 60446522 ID=Msa0303290-mRNA-1:exon:19714;Parent=Msa0303290-mRNA-1
chr2_3 exon 60446817 60446988 60446817 ID=Msa0303290-mRNA-1:exon:19713;Parent=Msa0303290-mRNA-1
chr2_3 exon 60447065 60447115 60447065 ID=Msa0303290-mRNA-1:exon:19712;Parent=Msa0303290-mRNA-1
chr2_3 exon 60447894 60447963 60447894 ID=Msa0303290-mRNA-1:exon:19711;Parent=Msa0303290-mRNA-1
chr2_3 exon 60448093 60448127 60448093 ID=Msa0303290-mRNA-1:exon:19710;Parent=Msa0303290-mRNA-1
chr2_3 exon 60448243 60448430 60448243 ID=Msa0303290-mRNA-1:exon:19709;Parent=Msa0303290-mRNA-1
chr2_3 exon 60449796 60449844 60449796 ID=Msa0303290-mRNA-1:exon:19708;Parent=Msa0303290-mRNA-1
chr2_3 exon 60449911 60450027 60449911 ID=Msa0303290-mRNA-1:exon:19707;Parent=Msa0303290-mRNA-1
chr2_3 exon 60450109 60450226 60450109 ID=Msa0303290-mRNA-1:exon:19706;Parent=Msa0303290-mRNA-1
chr2_3 exon 60450296 60450386 60450296 ID=Msa0303290-mRNA-1:exon:19705;Parent=Msa0303290-mRNA-1
chr2_3 exon 60450648 60450718 60450648 ID=Msa0303290-mRNA-1:exon:19704;Parent=Msa0303290-mRNA-1
chr2_3 exon 60451463 60451557 60451463 ID=Msa0303290-mRNA-1:exon:19703;Parent=Msa0303290-mRNA-1
chr2_3 exon 60452185 60452265 60452185 ID=Msa0303290-mRNA-1:exon:19702;Parent=Msa0303290-mRNA-1
chr2_3 exon 60452841 60452929 60452841 ID=Msa0303290-mRNA-1:exon:19701;Parent=Msa0303290-mRNA-1
chr2_3 exon 60453568 60453763 60453568 ID=Msa0303290-mRNA-1:exon:19700;Parent=Msa0303290-mRNA-1
chr2_3 exon 60454177 60454450 60454177 ID=Msa0303290-mRNA-1:exon:19699;Parent=Msa0303290-mRNA-1
chr2_3 five_prime_UTR 60454249 60454450 60454249 ID=Msa0303290-mRNA-1:five_prime_utr;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60454177 60454248 60454177 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60453568 60453763 60453568 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60452841 60452929 60452841 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60452185 60452265 60452185 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60451463 60451557 60451463 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60450648 60450718 60450648 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60450296 60450386 60450296 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60450109 60450226 60450109 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60449911 60450027 60449911 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60449796 60449844 60449796 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60448243 60448430 60448243 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60448093 60448127 60448093 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60447894 60447963 60447894 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60447065 60447115 60447065 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60446817 60446988 60446817 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60446522 60446667 60446522 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60446332 60446397 60446332 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 CDS 60445964 60446068 60445964 ID=Msa0303290-mRNA-1:cds;Parent=Msa0303290-mRNA-1
chr2_3 three_prime_UTR 60445573 60445963 60445573 ID=Msa0303290-mRNA-1:three_prime_utr;Parent=Msa0303290-mRNA-1
Gene Sequence

>Msa0303290

ATGTTTTGGAAAGATGGTGAACCTTTTCGGATCATCGGTGGTGACTTGCATTATTTTCGAGTGCATCCTGAGTATTGGGAAGATAGATTGTTAAAAGCCAAGGCATTGGGCTTGAACACAATTCAGACATATGTTCCTTGGAATCTGCATGAACCAGCACCAGGAAAGCTCGTTTTTGAGGGTATTGCAAATATACAATCATTCCTCAACCTTTGTCACAAACTCGATCTCCTTGTGATGGTTCGACCCGGACCATATATATGTGCAGAGTGGGACTGGGGTGGTATCCCAAGTTGGTTATTTTCCATGAACCCAACTCCAAAACCAAGATCATCTGATCCTGCTTTTCTTAAACTGGTTGAAAGATGGTGGGGCAACCTGCTTCCAAAATTTGTTCCTCTCCTATATGACAACGGAGGCCCTATAATAATGGTTCAGATTGAGAATGAGTATGGTTCTTATGGAGATGACAAATCATATCTCCATCACCTGATCACACTAGCTAGAGGTCATCTCGGGCAGGATGCCATTCTATACACTACAGATGGAGGGTCCAGGGAAAATCTTGAGAAAGGAACTATTCGTGGAGCTACTGTCTTTTCAGCTGTTGACTTCACTACTGGTGATGATCCTTGGCCTATATTCAAGTTACAGAAGGAGTTCAATGCCCCAGGAAAATCACCACCTTTGTCGACCGAATTTTACACTGGGTGGCTTACACATTGGGGAGAGAAAAATGCCAAGACCGATGCTGATTCCACAGCAGCTGCTCTTGAAGAAATTTTGAGAAAAAATGGGTCTGCAGTCCTATATATGGCGCATGGTGGTTCAAACTTTGGATTTTATAATGGAGCAAATACCGGTGCAGATGAGGCTGACTATAAACCTGATCTCACTTCATATGATTATGTTGGGAATTCTTTAACTGATGATGCCCCGATCAGGGAAGCTGGTGACGTTGACAATTCAAAATTCAATGCAATTCGGAGGGTTATATCCCGATATAGCTCTGCACCTCTTCCATCTATTCCCTCTTATAATGAAAAGACAACATATGGACCAATCCACTTACAAAGACGGTCTTCTTTATTTGATATGTTTGATTTCACCAATTCCTCCAACACTTTTAAATCAGAAAATCCAATGTCAATGGAGAATGTGGGCCAGCGAGGAGAGGGGGAAGAATCTTGTCCATACCAAAGGTGCATGATAGAGCTCAAGTATTCATCTCATGTTTTTCCAAAGGAAGGGGTACAAGACCAACTTATGTTGGTTGAAAACATGGGTCGTGTAAATTATGGGCCTTTCATCTTCGATAGGAAGGGCATTCTGTCTTCTGTTTATCTGGATGGGAATAGAGTACAAGGGTGGAAAATGTTCCCTATTCCTCTGCACAATCTAAACGAAGTGGCAAATTACAATCACATAAGGCAAGCTGCATATTCTGCATTCGGTGAAATATCAACCTCCAGGAAAAGGTTGATGAATAAAGCTGAAAATACCTCAAAAGAACCAGCTTTTTTTTCTGGACACTTCTTAATTGATAAAACAAGTCAGGTCAAGGATACATTTTTGTCATTAAAAAATTGGGGGAAAGGCGTTGTGTTTGTTAATGACTTCAATCTAGGAAGATATTGGCCGTTGAGAGGACCACAGTGCAACCTCTACGTTCCTGCTCCAGTCCTTAAGCAAGGAGATAATTTTGTGGTAATACTCGAGTTGGAATCTCCAGATCCCAATCTTGTGGTGCACACAGTTGGTGAGCCAGACTTCACATGTGGCTTTAGTGGGATGAAGATCCATCAGTTGTAA
Protein sequence

>Msa0303290

MFWKDGEPFRIIGGDLHYFRVHPEYWEDRLLKAKALGLNTIQTYVPWNLHEPAPGKLVFEGIANIQSFLNLCHKLDLLVMVRPGPYICAEWDWGGIPSWLFSMNPTPKPRSSDPAFLKLVERWWGNLLPKFVPLLYDNGGPIIMVQIENEYGSYGDDKSYLHHLITLARGHLGQDAILYTTDGGSRENLEKGTIRGATVFSAVDFTTGDDPWPIFKLQKEFNAPGKSPPLSTEFYTGWLTHWGEKNAKTDADSTAAALEEILRKNGSAVLYMAHGGSNFGFYNGANTGADEADYKPDLTSYDYVGNSLTDDAPIREAGDVDNSKFNAIRRVISRYSSAPLPSIPSYNEKTTYGPIHLQRRSSLFDMFDFTNSSNTFKSENPMSMENVGQRGEGEESCPYQRCMIELKYSSHVFPKEGVQDQLMLVENMGRVNYGPFIFDRKGILSSVYLDGNRVQGWKMFPIPLHNLNEVANYNHIRQAAYSAFGEISTSRKRLMNKAENTSKEPAFFSGHFLIDKTSQVKDTFLSLKNWGKGVVFVNDFNLGRYWPLRGPQCNLYVPAPVLKQGDNFVVILELESPDPNLVVHTVGEPDFTCGFSGMKIHQL*