AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0307400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0307400 MtrunA17_Chr8g0382831 98.429 191 3 0 1 191 1 191 7.71e-126 352
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 85 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTCTCTCCTTTGGTTAT+AGG 0.171653 2_4:+320920 None:intergenic
AGAAGAAGCTTCATACATTT+TGG 0.197326 2_4:+325985 None:intergenic
CTTTGAGTTGCTCTTGTTGT+TGG 0.256568 2_4:+320751 None:intergenic
TAATTTCTCAGCGAAGTTTC+GGG 0.272563 2_4:+326106 None:intergenic
CAGCGAAGTTTCGGGTAGTT+TGG 0.278679 2_4:+326114 None:intergenic
ATGTTGCTTGTCTTGACTTT+GGG 0.296941 2_4:+320895 None:intergenic
GTAATTTCTCAGCGAAGTTT+CGG 0.313368 2_4:+326105 None:intergenic
CATGTTGCTTGTCTTGACTT+TGG 0.323819 2_4:+320894 None:intergenic
CTTGTCCTTACTTACATCTT+CGG 0.341835 2_4:-326176 Msa0307400:five_prime_UTR
GCCCCACCAGCACCACCTTC+AGG 0.352873 2_4:+320722 None:intergenic
TGTATTGTTGTGTTCAGATT+TGG 0.353499 2_4:-320475 Msa0307400:three_prime_UTR
GCTGGTGGGGCAGATGAAAA+TGG 0.354321 2_4:-320710 Msa0307400:CDS
AGCGAAGTTTCGGGTAGTTT+GGG 0.362092 2_4:+326115 None:intergenic
GACGATGGAGATGGTGCATT+TGG 0.394570 2_4:-320827 Msa0307400:CDS
TATTGTCAAAGCCACGCTTT+TGG 0.395450 2_4:-325222 Msa0307400:CDS
TTGTCCTTACTTACATCTTC+GGG 0.402303 2_4:-326175 Msa0307400:five_prime_UTR
ATGGACGCCACGCTCCGTTT+TGG 0.402730 2_4:-325293 Msa0307400:CDS
AGAAATTACGAACCAGTACC+TGG 0.411802 2_4:-326091 Msa0307400:five_prime_UTR
TCCTGAAGGTGGTGCTGGTG+GGG 0.411941 2_4:-320723 Msa0307400:CDS
GCTCCTGAAGGTGGTGCTGG+TGG 0.414345 2_4:-320725 Msa0307400:CDS
TGTTTGTTTGTCGTACGAAA+TGG 0.424889 2_4:-325339 Msa0307400:exon
AGTCTCTAGATCTTCCTTCC+TGG 0.429424 2_4:-325913 Msa0307400:intron
GGAGAAGAGGACGAGGAGGA+AGG 0.430641 2_4:-320605 Msa0307400:CDS
CTCCTGAAGGTGGTGCTGGT+GGG 0.473479 2_4:-320724 Msa0307400:CDS
GAGATGGTGCATTTGGAGAA+GGG 0.480248 2_4:-320820 Msa0307400:CDS
CTTTATAAGGAGGCCTATGT+AGG 0.483502 2_4:-320401 Msa0307400:three_prime_UTR
GAGAGGAGAGACCCAGGTAC+TGG 0.483911 2_4:+326079 None:intergenic
AGAAGACAATGAAGAGGAAG+AGG 0.484704 2_4:-320573 Msa0307400:CDS
CTTGACTTTCCGGTGAAGAC+CGG 0.487926 2_4:-326255 None:intergenic
CTTTGCAGCCACCAAAGAAA+AGG 0.492171 2_4:-320532 Msa0307400:CDS
GACTGAGAAGCAAGATCTGA+GGG 0.492606 2_4:+325932 None:intergenic
CCTCATCGTCATCCTCGTCT+TGG 0.494393 2_4:+320657 None:intergenic
GGTGAGTGAGAGAGAAAGAG+AGG 0.494792 2_4:+326062 None:intergenic
GTTCATTACCCGGTCTTCAC+CGG 0.498994 2_4:+326246 None:intergenic
GGATGACGACGATGAGGAAG+AGG 0.500878 2_4:-320630 Msa0307400:CDS
AGAGGGTGGAGAAGAGGACG+AGG 0.509661 2_4:-320612 Msa0307400:CDS
AAAGCTCCTGAAGGTGGTGC+TGG 0.510556 2_4:-320728 Msa0307400:CDS
AGACAATGAAGAGGAAGAGG+AGG 0.514365 2_4:-320570 Msa0307400:CDS
GAGAAAGAGAGGAGAGACCC+AGG 0.515720 2_4:+326073 None:intergenic
GGAAGAGGAGGATGAAGATG+AGG 0.522929 2_4:-320558 Msa0307400:CDS
GATGAATTGTCATCTGAAGA+TGG 0.523962 2_4:-320794 Msa0307400:CDS
CATGATGCTGAAGGAGAAGA+TGG 0.525643 2_4:-320875 Msa0307400:CDS
GTTTCGGGTAGTTTGGGCAG+TGG 0.527588 2_4:+326121 None:intergenic
GGAGATGGTGCATTTGGAGA+AGG 0.529378 2_4:-320821 Msa0307400:CDS
TCCTTTGGTTATAGGCATGT+CGG 0.535637 2_4:+320928 None:intergenic
AATTAAAACATGTCCTACAT+AGG 0.536097 2_4:+320388 None:intergenic
TCTGAAGATGGAGCTGGATA+CGG 0.537126 2_4:-320782 Msa0307400:CDS
CGTACGTTAACGCGCCAAAA+CGG 0.542030 2_4:+325279 None:intergenic
TTGACTTTCCGGTGAAGACC+GGG 0.543075 2_4:-326254 None:intergenic
GGGTGGAGAAGAGGACGAGG+AGG 0.543759 2_4:-320609 Msa0307400:CDS
CGAGGATGACGATGAGGACG+AGG 0.544157 2_4:-320651 Msa0307400:CDS
TGAACAACAGAGTTCGATGA+TGG 0.546158 2_4:-325312 Msa0307400:CDS
CATGGTTACAAGAGCTTCTG+CGG 0.550270 2_4:+325256 None:intergenic
AGACTGAGAAGCAAGATCTG+AGG 0.550910 2_4:+325931 None:intergenic
TGAGGAAGAGGGTGGAGAAG+AGG 0.553351 2_4:-320618 Msa0307400:CDS
GATGAGAGAGGTTACCAGGA+AGG 0.553877 2_4:+325899 None:intergenic
GACAATAGCAGAAGCTAACA+TGG 0.555250 2_4:+325238 None:intergenic
GCTGCCCGAAGATGTAAGTA+AGG 0.555785 2_4:+326171 None:intergenic
TTGTCATCTGAAGATGGAGC+TGG 0.560808 2_4:-320788 Msa0307400:CDS
GGCAGATGAAAATGGAGAAG+AGG 0.564151 2_4:-320702 Msa0307400:CDS
AGATGGTGCATTTGGAGAAG+GGG 0.569589 2_4:-320819 Msa0307400:CDS
GAAGAGGAAGATGATGAAGA+CGG 0.572055 2_4:-320686 Msa0307400:CDS
TGATGAAGAAGACAATGAAG+AGG 0.577160 2_4:-320579 Msa0307400:CDS
AACTCAAAGAAAGCTCCTGA+AGG 0.580770 2_4:-320737 Msa0307400:CDS
GAAGAAGATGACGATGGAGA+TGG 0.589363 2_4:-320836 Msa0307400:CDS
ATGTAAGTAAGGACAAGTGT+GGG 0.601552 2_4:+326182 None:intergenic
TCAAAGAAAGCTCCTGAAGG+TGG 0.613002 2_4:-320734 Msa0307400:CDS
GACAAGCAACATGATGCTGA+AGG 0.614183 2_4:-320884 Msa0307400:CDS
GTAGCATTCTAATTACGCAA+TGG 0.625317 2_4:+320351 None:intergenic
GAATAGTCGAGTTTAAAACT+AGG 0.626041 2_4:+320281 None:intergenic
GGACGAGGATGACGACGATG+AGG 0.626052 2_4:-320636 Msa0307400:CDS
ACCGACATGCCTATAACCAA+AGG 0.632185 2_4:-320929 Msa0307400:CDS
GATGTAAGTAAGGACAAGTG+TGG 0.640222 2_4:+326181 None:intergenic
TCGAAATATAGAAATATCAG+AGG 0.642378 2_4:+326041 None:intergenic
TAACGCGCCAAAACGGAGCG+TGG 0.645536 2_4:+325286 None:intergenic
GATGACGACGATGAGGAAGA+GGG 0.650173 2_4:-320629 Msa0307400:CDS
TCGTGATCGTAGAAACGTTG+AGG 0.653318 2_4:+326017 None:intergenic
GACGACGATGAGGAAGAGGG+TGG 0.671206 2_4:-320626 Msa0307400:CDS
GAAATTACGAACCAGTACCT+GGG 0.673866 2_4:-326090 Msa0307400:five_prime_UTR
ACTAACCGGAGCCAAAAGCG+TGG 0.690363 2_4:+325211 None:intergenic
TTTCTACGATCACGATCCAA+CGG 0.690950 2_4:-326009 Msa0307400:five_prime_UTR
GAAGACGAAGAAGATGACGA+TGG 0.695068 2_4:-320842 Msa0307400:CDS
CCAAGACGAGGATGACGATG+AGG 0.711949 2_4:-320657 Msa0307400:CDS
AGACGGTGATGACCAAGACG+AGG 0.728787 2_4:-320669 Msa0307400:CDS
AACACAACAATACAAATACG+AGG 0.737767 2_4:+320484 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTTATTTTTTTAT+TGG - chr2_4:323870-323889 Msa0307400:intron 0.0%
!! ATAATTTATGTATTATTCTA+AGG - chr2_4:320962-320981 Msa0307400:intron 10.0%
!! AAAAAAAACAAAGTAATAAT+TGG - chr2_4:321020-321039 Msa0307400:intron 10.0%
!! AAAATACTTCAAATTATATT+AGG + chr2_4:322018-322037 None:intergenic 10.0%
!! AAAGAAAAATTAATAAATCT+GGG + chr2_4:322255-322274 None:intergenic 10.0%
!! AAAAGAAAAATTAATAAATC+TGG + chr2_4:322256-322275 None:intergenic 10.0%
!!! TATTGATAGTAAAAAATAAA+GGG + chr2_4:322722-322741 None:intergenic 10.0%
!!! ATATTGATAGTAAAAAATAA+AGG + chr2_4:322723-322742 None:intergenic 10.0%
!! TATAAAAAAATGTAGTTATT+TGG + chr2_4:323512-323531 None:intergenic 10.0%
!!! CAAATTTTTTTTATAGTTTT+TGG - chr2_4:324008-324027 Msa0307400:intron 10.0%
!! TTAAAAAAATTAAAAAATCC+TGG - chr2_4:324176-324195 Msa0307400:intron 10.0%
!!! AATTTTCATTAGTATTTTTT+CGG - chr2_4:324712-324731 Msa0307400:intron 10.0%
!! AATGAAAAAAATTGAAAAAA+CGG + chr2_4:325002-325021 None:intergenic 10.0%
!! AAAAAAATATTAAAACATTC+TGG + chr2_4:325045-325064 None:intergenic 10.0%
!! AAAAAATTATAAAAGATTTG+CGG - chr2_4:325252-325271 Msa0307400:CDS 10.0%
!! ACATATCATAAAAATAAAAA+AGG + chr2_4:325513-325532 None:intergenic 10.0%
!!! TTTTTCATAACATTATTAAA+TGG - chr2_4:325542-325561 Msa0307400:intron 10.0%
!!! TTTTCATAACATTATTAAAT+GGG - chr2_4:325543-325562 Msa0307400:intron 10.0%
!!! TTGCTTTTTTTTTTTTTTAG+AGG + chr2_4:320849-320868 None:intergenic 15.0%
!!! ACTTCAAAGTTTTATTTTTT+TGG - chr2_4:321501-321520 Msa0307400:intron 15.0%
!! AAAAAAAGAATAAAAGTGAA+AGG + chr2_4:321759-321778 None:intergenic 15.0%
!!! TTTACAAACTTGTTTTTTAA+AGG - chr2_4:321830-321849 Msa0307400:intron 15.0%
!!! TTACAAACTTGTTTTTTAAA+GGG - chr2_4:321831-321850 Msa0307400:intron 15.0%
!! ATTCTAATTCTATAAGAATA+AGG + chr2_4:321876-321895 None:intergenic 15.0%
!!! AATAGTGAATATTTTCAAAT+AGG + chr2_4:321993-322012 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr2_4:322383-322402 Msa0307400:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr2_4:322407-322426 Msa0307400:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - chr2_4:322853-322872 Msa0307400:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - chr2_4:322854-322873 Msa0307400:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr2_4:322918-322937 Msa0307400:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr2_4:322919-322938 Msa0307400:intron 15.0%
!!! AAAACGAATAGTTTTTTTAA+AGG - chr2_4:323259-323278 Msa0307400:intron 15.0%
!! CTTCAAAAAAAAAAAATTAG+TGG + chr2_4:323555-323574 None:intergenic 15.0%
!!! TTTTTTTATTGGCTAAAATA+TGG - chr2_4:323881-323900 Msa0307400:intron 15.0%
!!! CAAAAAAAATTTATAGCTTT+TGG - chr2_4:323947-323966 Msa0307400:intron 15.0%
!! AACTATAAAAAAAATTTGCA+GGG + chr2_4:324006-324025 None:intergenic 15.0%
!! AAACTATAAAAAAAATTTGC+AGG + chr2_4:324007-324026 None:intergenic 15.0%
!! AAAATTATAAAAGATTTGCA+TGG + chr2_4:324067-324086 None:intergenic 15.0%
!!! ATATTTTTTTCAATTTTTCC+AGG + chr2_4:324197-324216 None:intergenic 15.0%
!! TAAAAAAGATGAAAAAATTC+TGG - chr2_4:324332-324351 Msa0307400:intron 15.0%
!!! AATTCTGAAAATAAAAATTC+TGG - chr2_4:324435-324454 Msa0307400:intron 15.0%
!!! ATTTTCATTAGTATTTTTTC+GGG - chr2_4:324713-324732 Msa0307400:intron 15.0%
!!! ATTTTTGTGTATTTATAAAG+CGG - chr2_4:324738-324757 Msa0307400:intron 15.0%
!! AAAAATTATAAAAGATTTGC+GGG - chr2_4:325253-325272 Msa0307400:CDS 15.0%
!! AACTATAAAAAAAAAATTGC+AGG - chr2_4:325315-325334 Msa0307400:CDS 15.0%
!! ACTATAAAAAAAAAATTGCA+GGG - chr2_4:325316-325335 Msa0307400:CDS 15.0%
!!! CAAATTTTTTTTATAGCTTT+TGG + chr2_4:325375-325394 None:intergenic 15.0%
!!! GTGTTTTTATTTACTTTATA+AGG - chr2_4:326107-326126 Msa0307400:five_prime_UTR 15.0%
!!! TTTTTATTTACTTTATAAGG+AGG - chr2_4:326110-326129 Msa0307400:five_prime_UTR 15.0%
!! AAAGTGTAAAAATGGAATTA+CGG + chr2_4:320376-320395 None:intergenic 20.0%
!!! ATGTATTATTCTAAGGTTTA+TGG - chr2_4:320969-320988 Msa0307400:intron 20.0%
!! ATAGTCTATAATCAATTATG+AGG - chr2_4:321528-321547 Msa0307400:intron 20.0%
!! TAGTCTATAATCAATTATGA+GGG - chr2_4:321529-321548 Msa0307400:intron 20.0%
!!! ATATTGTTGATAAAGACAAA+AGG + chr2_4:321559-321578 None:intergenic 20.0%
!!! AAGGCTATTTTTTATAGAAA+AGG + chr2_4:321740-321759 None:intergenic 20.0%
!! AAGGCTATTATTTATAGAAA+AGG + chr2_4:321796-321815 None:intergenic 20.0%
!! GTAAAAAGAATAAAAGTGAA+AGG + chr2_4:321815-321834 None:intergenic 20.0%
!!! TACAAACTTGTTTTTTAAAG+GGG - chr2_4:321832-321851 Msa0307400:intron 20.0%
!!! ATAAAAGTGAAGAATTTTAG+AGG - chr2_4:321921-321940 Msa0307400:intron 20.0%
!! AATATCATATAAGATTTCGT+TGG - chr2_4:322061-322080 Msa0307400:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - chr2_4:322350-322369 Msa0307400:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr2_4:322393-322412 None:intergenic 20.0%
!!! CACTTTTTAAGCATTTTAAA+AGG + chr2_4:322614-322633 None:intergenic 20.0%
!! GAAAGAATTAAACATAACAT+GGG + chr2_4:322660-322679 None:intergenic 20.0%
!! ATGAAAAAAAGTTAACAAGT+TGG + chr2_4:322697-322716 None:intergenic 20.0%
!!! TAAAATGATTTTTTGTCACT+CGG - chr2_4:322744-322763 Msa0307400:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - chr2_4:322855-322874 Msa0307400:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr2_4:322878-322897 Msa0307400:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+AGG - chr2_4:322988-323007 Msa0307400:intron 20.0%
!! TTAAAAAATAATTGTCCCTA+AGG - chr2_4:323474-323493 Msa0307400:intron 20.0%
!! TAAAAAATAATTGTCCCTAA+GGG - chr2_4:323475-323494 Msa0307400:intron 20.0%
!! AGAATTACAAAACAAATTAG+CGG + chr2_4:323581-323600 None:intergenic 20.0%
!! TTGTTCTTAACTTAAAATAC+TGG - chr2_4:323625-323644 Msa0307400:intron 20.0%
!! ATACTACATTAACTATACTA+TGG - chr2_4:323696-323715 Msa0307400:intron 20.0%
!!! AGCTATAAATTTTTTTTGCA+GGG + chr2_4:323945-323964 None:intergenic 20.0%
!!! AAGCTATAAATTTTTTTTGC+AGG + chr2_4:323946-323965 None:intergenic 20.0%
!! CGAAAATAAAAATGAAATTC+TGG - chr2_4:324488-324507 Msa0307400:intron 20.0%
!!! AGTATTTCTCAAAAATTTTC+CGG - chr2_4:324551-324570 Msa0307400:intron 20.0%
!! TATAAATACACAAAAATTCC+CGG + chr2_4:324573-324592 None:intergenic 20.0%
!! TATAAATACACAAAAATTCC+CGG + chr2_4:324573-324592 None:intergenic 20.0%
!! TATTTATAAACCGAGAATAA+GGG - chr2_4:324585-324604 Msa0307400:intron 20.0%
!!! TTTTCATTAGTATTTTTTCG+GGG - chr2_4:324714-324733 Msa0307400:intron 20.0%
!!! TGTATTTTTTTCCTTATTCT+CGG + chr2_4:324785-324804 None:intergenic 20.0%
!! CGGAAAAAATTAAAAAAATC+TGG + chr2_4:324982-325001 None:intergenic 20.0%
!! AAAATTATAAAAGATTTGCG+GGG - chr2_4:325254-325273 Msa0307400:CDS 20.0%
!! AAGCTATAAAAAAAATTTGC+AGG - chr2_4:325376-325395 Msa0307400:intron 20.0%
!! AGCTATAAAAAAAATTTGCA+GGG - chr2_4:325377-325396 Msa0307400:intron 20.0%
!! AAGCTATAAAAAAAATTTGC+AGG - chr2_4:325376-325395 Msa0307400:intron 20.0%
!! AGCTATAAAAAAAATTTGCA+GGG - chr2_4:325377-325396 Msa0307400:intron 20.0%
!! AATGAATTTTGTTCATTACC+CGG + chr2_4:320288-320307 None:intergenic 25.0%
!!! GGGTTTTTGTTAATTTGATA+TGG + chr2_4:320322-320341 None:intergenic 25.0%
! AAGTGTAAAAATGGAATTAC+GGG + chr2_4:320375-320394 None:intergenic 25.0%
! TCGAAATATAGAAATATCAG+AGG + chr2_4:320483-320502 None:intergenic 25.0%
!! AACTAAAACCTCTGAAAAAT+GGG + chr2_4:320562-320581 None:intergenic 25.0%
! ACGAAGAATTCAAACTAATT+AGG + chr2_4:320903-320922 None:intergenic 25.0%
! TTCAATCAAAAGATAGTACA+TGG + chr2_4:321461-321480 None:intergenic 25.0%
!!! ACTTGAACTTTTTTTGGTTT+AGG - chr2_4:321695-321714 Msa0307400:intron 25.0%
!!! CTTGAACTTTTTTTGGTTTA+GGG - chr2_4:321696-321715 Msa0307400:intron 25.0%
! CTGTATCATTTAATATGAGA+CGG - chr2_4:322175-322194 Msa0307400:intron 25.0%
! CGAAAGAATTAAACATAACA+TGG + chr2_4:322661-322680 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr2_4:322877-322896 Msa0307400:intron 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG - chr2_4:322965-322984 Msa0307400:intron 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - chr2_4:322966-322985 Msa0307400:intron 25.0%
! AAAGTAAAAGTGAAAAGAAG+CGG - chr2_4:323065-323084 Msa0307400:intron 25.0%
! GTGAGAAATAAATGACAAAT+AGG + chr2_4:323379-323398 None:intergenic 25.0%
!!! TTGTTTTGTAATTCTTGAGT+TGG - chr2_4:323586-323605 Msa0307400:intron 25.0%
! ATTAACTATACTATGGCTTA+TGG - chr2_4:323703-323722 Msa0307400:intron 25.0%
! TTTAAGTGAAACAAACAAAG+CGG + chr2_4:323826-323845 None:intergenic 25.0%
!!! TATTGGCTAAAATATGGTTT+TGG - chr2_4:323887-323906 Msa0307400:intron 25.0%
!! GTATTTCTCAAAAATTTTCC+GGG - chr2_4:324552-324571 Msa0307400:intron 25.0%
! GTATTTATAAACCGAGAATA+AGG - chr2_4:324584-324603 Msa0307400:intron 25.0%
! GTATTTATAAACCGAGAATA+AGG - chr2_4:324584-324603 Msa0307400:intron 25.0%
!!! CATATTTTTTCCCTTATTCT+CGG + chr2_4:324642-324661 None:intergenic 25.0%
! ATACATAAAAAACCTAAGCT+CGG + chr2_4:324677-324696 None:intergenic 25.0%
!! ATTTATAAAGCGGAAACTTT+TGG - chr2_4:324748-324767 Msa0307400:intron 25.0%
!! TTTATAAAGCGGAAACTTTT+GGG - chr2_4:324749-324768 Msa0307400:intron 25.0%
! GTATTTATAAACCGAGAATA+AGG - chr2_4:324584-324603 Msa0307400:intron 25.0%
! TAACATTATTAAATGGGTGT+AGG - chr2_4:325549-325568 Msa0307400:intron 25.0%
!! TTAGTACTGAAAAAACAACA+TGG + chr2_4:326081-326100 None:intergenic 25.0%
! AATTAAAACATGTCCTACAT+AGG + chr2_4:326136-326155 None:intergenic 25.0%
!! ATTAGAATGCTACATTTTAC+TGG - chr2_4:326180-326199 Msa0307400:five_prime_UTR 25.0%
!! TTAGAATGCTACATTTTACT+GGG - chr2_4:326181-326200 Msa0307400:five_prime_UTR 25.0%
! AGAAGAAGCTTCATACATTT+TGG + chr2_4:320539-320558 None:intergenic 30.0%
! GAACTAAAACCTCTGAAAAA+TGG + chr2_4:320563-320582 None:intergenic 30.0%
AAGTGTTTGAGCAAAAAAGA+GGG + chr2_4:320766-320785 None:intergenic 30.0%
!!! ATTCGTTTTGTTGTTTGAGA+AGG - chr2_4:321155-321174 Msa0307400:intron 30.0%
!!! TTCGTTTTGTTGTTTGAGAA+GGG - chr2_4:321156-321175 Msa0307400:intron 30.0%
!! ACGAAGAAAAAAGTACTAAC+CGG + chr2_4:321327-321346 None:intergenic 30.0%
GATAAGATTAGATCTAGTCA+AGG + chr2_4:321432-321451 None:intergenic 30.0%
!!! TGTGCAATTTTTAGGGTAAA+CGG - chr2_4:321648-321667 Msa0307400:intron 30.0%
!!! ATTTTTAGGGTAAACGGATA+TGG - chr2_4:321654-321673 Msa0307400:intron 30.0%
!!! GGCTTAACTTGAACTTTTTT+TGG - chr2_4:321689-321708 Msa0307400:intron 30.0%
TCAAATAGGTCATCTATTGT+AGG + chr2_4:321979-321998 None:intergenic 30.0%
TATCATTTAATATGAGACGG+AGG - chr2_4:322178-322197 Msa0307400:intron 30.0%
ATCATTTAATATGAGACGGA+GGG - chr2_4:322179-322198 Msa0307400:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr2_4:322301-322320 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr2_4:322302-322321 Msa0307400:intron 30.0%
! TGTGTAGAGTATTAATTGGA+GGG - chr2_4:322436-322455 Msa0307400:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr2_4:322862-322881 Msa0307400:intron 30.0%
AGAAAATAGGTCAGTTATTC+CGG - chr2_4:323001-323020 Msa0307400:intron 30.0%
!!! CTTGTGTGAACTTTTTTTAG+AGG - chr2_4:323194-323213 Msa0307400:intron 30.0%
!!! TGAACTTTTTTTAGAGGACT+TGG - chr2_4:323200-323219 Msa0307400:intron 30.0%
CACAAATTCTTCATCAACAT+GGG + chr2_4:323299-323318 None:intergenic 30.0%
ACACAAATTCTTCATCAACA+TGG + chr2_4:323300-323319 None:intergenic 30.0%
TCTTCACAAAATTAACTGCT+TGG - chr2_4:323339-323358 Msa0307400:intron 30.0%
TAACTGCTTGGCTAATTATT+AGG - chr2_4:323351-323370 Msa0307400:intron 30.0%
! TTCTTTGAAAACATTCTTCG+AGG - chr2_4:323735-323754 Msa0307400:intron 30.0%
! TCTTTGAAAACATTCTTCGA+GGG - chr2_4:323736-323755 Msa0307400:intron 30.0%
!!! AAAACTAGCCTATTTTTGCA+GGG + chr2_4:323974-323993 None:intergenic 30.0%
!! AAAACTGGCATATTTTTGCA+AGG + chr2_4:325286-325305 None:intergenic 30.0%
TGTATTTATAAACCGAGCTT+AGG - chr2_4:324662-324681 Msa0307400:intron 30.0%
TTAGTATATATGTCGAGCTT+AGG + chr2_4:324817-324836 None:intergenic 30.0%
ATGTCGAAATTTCGAAATTC+TGG + chr2_4:324874-324893 None:intergenic 30.0%
! TTGCAAAAATAGGTCAGTTT+TGG + chr2_4:325410-325429 None:intergenic 30.0%
!!! AAAACTGACCTATTTTTGCA+AGG - chr2_4:325409-325428 Msa0307400:intron 30.0%
! CTTTTGATCCTTGCAAAAAT+AGG + chr2_4:325420-325439 None:intergenic 30.0%
! ATTCACTTCTTCCTTTTCTT+TGG + chr2_4:326003-326022 None:intergenic 30.0%
AACACAACAATACAAATACG+AGG + chr2_4:326040-326059 None:intergenic 30.0%
TGTATTGTTGTGTTCAGATT+TGG - chr2_4:326046-326065 Msa0307400:five_prime_UTR 30.0%
! GAATAGTCGAGTTTAAAACT+AGG + chr2_4:326243-326262 None:intergenic 30.0%
ATGTAAGTAAGGACAAGTGT+GGG + chr2_4:320342-320361 None:intergenic 35.0%
CTTGTCCTTACTTACATCTT+CGG - chr2_4:320345-320364 Msa0307400:three_prime_UTR 35.0%
TTGTCCTTACTTACATCTTC+GGG - chr2_4:320346-320365 Msa0307400:three_prime_UTR 35.0%
! GTGGAGAGAAAGTGTAAAAA+TGG + chr2_4:320384-320403 None:intergenic 35.0%
TAATTTCTCAGCGAAGTTTC+GGG + chr2_4:320418-320437 None:intergenic 35.0%
GTAATTTCTCAGCGAAGTTT+CGG + chr2_4:320419-320438 None:intergenic 35.0%
! GAAGTGTTTGAGCAAAAAAG+AGG + chr2_4:320767-320786 None:intergenic 35.0%
GCTAAACAACTCACAAAAAG+TGG + chr2_4:320789-320808 None:intergenic 35.0%
!! TTCTGAGATGATCTAACGAA+CGG - chr2_4:321082-321101 Msa0307400:intron 35.0%
TGTTTGTTTGTCGTACGAAA+TGG - chr2_4:321182-321201 Msa0307400:intron 35.0%
GTTTACCCTAAAAATTGCAC+AGG + chr2_4:321649-321668 None:intergenic 35.0%
ATAGGTCATCTATTGTAGGA+CGG + chr2_4:321975-321994 None:intergenic 35.0%
! GCAGTGTGTAGAGTATTAAT+TGG - chr2_4:322432-322451 Msa0307400:intron 35.0%
! GTGTGTAGAGTATTAATTGG+AGG - chr2_4:322435-322454 Msa0307400:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr2_4:322536-322555 Msa0307400:intron 35.0%
AAAAGTTAACGAGAAGCTCT+CGG + chr2_4:322637-322656 None:intergenic 35.0%
!!! ATGATTTTTTGTCACTCGGA+CGG - chr2_4:322748-322767 Msa0307400:intron 35.0%
! GAACATAGTAAAGGTGTGTT+GGG - chr2_4:322770-322789 Msa0307400:intron 35.0%
CAAAGTAGGTCAATTAAACC+GGG + chr2_4:322818-322837 None:intergenic 35.0%
CCAAAGTAGGTCAATTAAAC+CGG + chr2_4:322819-322838 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + chr2_4:322832-322851 None:intergenic 35.0%
GAAAATAGGTCAGTTATTCC+GGG - chr2_4:323002-323021 Msa0307400:intron 35.0%
!!! CAAAACTAGCCTATTTTTGC+AGG + chr2_4:323975-323994 None:intergenic 35.0%
!!! CTGCAAAAATAGGCTAGTTT+TGG - chr2_4:323973-323992 Msa0307400:intron 35.0%
CCGGAAAATTTCCTTATTCT+CGG + chr2_4:324598-324617 None:intergenic 35.0%
! CCGAGAATAAGGAAATTTTC+CGG - chr2_4:324595-324614 Msa0307400:intron 35.0%
! CGAGAATAAGGAAATTTTCC+GGG - chr2_4:324596-324615 Msa0307400:intron 35.0%
!!! AAAACTGGCCTATTTTTGCA+GGG - chr2_4:325348-325367 Msa0307400:five_prime_UTR 35.0%
! CAAAACTGACCTATTTTGCA+GGG - chr2_4:325469-325488 Msa0307400:intron 35.0%
!! GATTTTGATCCCTGCAAAAT+AGG + chr2_4:325481-325500 None:intergenic 35.0%
TTACTCTCTCCTTTGGTTAT+AGG + chr2_4:325604-325623 None:intergenic 35.0%
! ATGTTGCTTGTCTTGACTTT+GGG + chr2_4:325629-325648 None:intergenic 35.0%
GATGAATTGTCATCTGAAGA+TGG - chr2_4:325727-325746 Msa0307400:intron 35.0%
TGATGAAGAAGACAATGAAG+AGG - chr2_4:325942-325961 Msa0307400:five_prime_UTR 35.0%
GTAGCATTCTAATTACGCAA+TGG + chr2_4:326173-326192 None:intergenic 35.0%
GATGTAAGTAAGGACAAGTG+TGG + chr2_4:320343-320362 None:intergenic 40.0%
AGAAATTACGAACCAGTACC+TGG - chr2_4:320430-320449 Msa0307400:three_prime_UTR 40.0%
GAAATTACGAACCAGTACCT+GGG - chr2_4:320431-320450 Msa0307400:three_prime_UTR 40.0%
TTTCTACGATCACGATCCAA+CGG - chr2_4:320512-320531 Msa0307400:exon 40.0%
! CTTCATACATTTTGGACCGT+TGG + chr2_4:320531-320550 None:intergenic 40.0%
!! CTTCTTCTCCCATTTTTCAG+AGG - chr2_4:320551-320570 Msa0307400:CDS 40.0%
GAAGAGAAGAAAGATGAGAG+AGG + chr2_4:320637-320656 None:intergenic 40.0%
ATCATCTCAGAAATCACGAC+AGG + chr2_4:321074-321093 None:intergenic 40.0%
TGAACAACAGAGTTCGATGA+TGG - chr2_4:321209-321228 Msa0307400:intron 40.0%
GACAATAGCAGAAGCTAACA+TGG + chr2_4:321286-321305 None:intergenic 40.0%
! TATTGTCAAAGCCACGCTTT+TGG - chr2_4:321299-321318 Msa0307400:intron 40.0%
ATTAGCATTAGTCGTGGCTT+AGG + chr2_4:321593-321612 None:intergenic 40.0%
! ACGGAGGGAGTTTGTTTAAT+GGG - chr2_4:322194-322213 Msa0307400:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_4:322540-322559 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+AGG - chr2_4:322540-322559 Msa0307400:intron 40.0%
! GGAACATAGTAAAGGTGTGT+TGG - chr2_4:322769-322788 Msa0307400:intron 40.0%
CCGGTTTAATTGACCTACTT+TGG - chr2_4:322816-322835 Msa0307400:intron 40.0%
!! TGTTTTTGTCGTGTGTGTGA+AGG - chr2_4:323040-323059 Msa0307400:intron 40.0%
! AAGCGGATTCGTGGATTATT+CGG - chr2_4:323082-323101 Msa0307400:intron 40.0%
! GATTCGTGGATTATTCGGTT+TGG - chr2_4:323087-323106 Msa0307400:intron 40.0%
GGCACACTATTAAGCTATGT+CGG - chr2_4:323167-323186 Msa0307400:intron 40.0%
TCACTTTCTGATTCACTACG+TGG - chr2_4:323395-323414 Msa0307400:intron 40.0%
TGGAAAAAGACTTGCCCTTA+GGG + chr2_4:323492-323511 None:intergenic 40.0%
TTGGAAAAAGACTTGCCCTT+AGG + chr2_4:323493-323512 None:intergenic 40.0%
CAAAGCGGATAGTAATACAG+AGG + chr2_4:323811-323830 None:intergenic 40.0%
!! CAAAACTGGCCTATTTTGCA+GGG + chr2_4:323914-323933 None:intergenic 40.0%
! CTTTTGGTCCCTGCAAAAAT+AGG - chr2_4:323963-323982 Msa0307400:intron 40.0%
! GCATGGACTAAAAGCAAAAC+TGG + chr2_4:324050-324069 None:intergenic 40.0%
! CTGCAAAAATAGGCCAGTTT+TGG + chr2_4:325349-325368 None:intergenic 40.0%
!!! CAAAACTGGCCTATTTTTGC+AGG - chr2_4:325347-325366 Msa0307400:five_prime_UTR 40.0%
! CTTTTGGTCCCTGCAAAAAT+AGG + chr2_4:323963-323982 None:intergenic 40.0%
! CCTGCAAAATAGGTCAGTTT+TGG + chr2_4:325471-325490 None:intergenic 40.0%
! CCAAAACTGACCTATTTTGC+AGG - chr2_4:325468-325487 Msa0307400:intron 40.0%
TCCTTTGGTTATAGGCATGT+CGG + chr2_4:325596-325615 None:intergenic 40.0%
! TTGGGTTTTACTCTCTCCTT+TGG + chr2_4:325611-325630 None:intergenic 40.0%
! CATGTTGCTTGTCTTGACTT+TGG + chr2_4:325630-325649 None:intergenic 40.0%
!! CTTTGAGTTGCTCTTGTTGT+TGG + chr2_4:325773-325792 None:intergenic 40.0%
AACTCAAAGAAAGCTCCTGA+AGG - chr2_4:325784-325803 Msa0307400:intron 40.0%
GAAGAGGAAGATGATGAAGA+CGG - chr2_4:325835-325854 Msa0307400:intron 40.0%
AGAAGACAATGAAGAGGAAG+AGG - chr2_4:325948-325967 Msa0307400:five_prime_UTR 40.0%
! CACTTCTTCCTTTTCTTTGG+TGG + chr2_4:326000-326019 None:intergenic 40.0%
CTTTATAAGGAGGCCTATGT+AGG - chr2_4:326120-326139 Msa0307400:five_prime_UTR 40.0%
! AGCGAAGTTTCGGGTAGTTT+GGG + chr2_4:320409-320428 None:intergenic 45.0%
TCGTGATCGTAGAAACGTTG+AGG + chr2_4:320507-320526 None:intergenic 45.0%
GACTGAGAAGCAAGATCTGA+GGG + chr2_4:320592-320611 None:intergenic 45.0%
AGACTGAGAAGCAAGATCTG+AGG + chr2_4:320593-320612 None:intergenic 45.0%
AGTCTCTAGATCTTCCTTCC+TGG - chr2_4:320608-320627 Msa0307400:CDS 45.0%
GAAAGATGAGAGAGGTTACC+AGG + chr2_4:320629-320648 None:intergenic 45.0%
CATGGTTACAAGAGCTTCTG+CGG + chr2_4:321268-321287 None:intergenic 45.0%
GCGCAAATTAGCATTAGTCG+TGG + chr2_4:321599-321618 None:intergenic 45.0%
TGCGCATGTTCACGAGTTAT+AGG - chr2_4:321614-321633 Msa0307400:intron 45.0%
TGTTCACGAGTTATAGGCCA+TGG - chr2_4:321620-321639 Msa0307400:intron 45.0%
AAAAATTGCACAGGCCACCA+TGG + chr2_4:321640-321659 None:intergenic 45.0%
! TGGTGGCCTGTGCAATTTTT+AGG - chr2_4:321640-321659 Msa0307400:intron 45.0%
! GGTGGCCTGTGCAATTTTTA+GGG - chr2_4:321641-321660 Msa0307400:intron 45.0%
GTCATCTATTGTAGGACGGA+GGG + chr2_4:321971-321990 None:intergenic 45.0%
! GACGGAGGGAGTTTGTTTAA+TGG - chr2_4:322193-322212 Msa0307400:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr2_4:322539-322558 None:intergenic 45.0%
ACTCGGACGGAACATAGTAA+AGG - chr2_4:322761-322780 Msa0307400:intron 45.0%
GTAGGTCAATTAAACCGGGA+CGG + chr2_4:322814-322833 None:intergenic 45.0%
ATAGGTCAGTTATTCCGGGA+CGG - chr2_4:323006-323025 Msa0307400:intron 45.0%
! AGTGAAAAGAAGCGGATTCG+TGG - chr2_4:323073-323092 Msa0307400:intron 45.0%
ATCAAAACGACACGCGTTAG+AGG + chr2_4:323139-323158 None:intergenic 45.0%
!!! TCTAACGCGTGTCGTTTTGA+TGG - chr2_4:323138-323157 Msa0307400:intron 45.0%
!!! CTAACGCGTGTCGTTTTGAT+GGG - chr2_4:323139-323158 Msa0307400:intron 45.0%
!! GGTTTTGGTCCCTGCAAAAT+AGG - chr2_4:323902-323921 Msa0307400:intron 45.0%
!! CCAAAACTGGCCTATTTTGC+AGG + chr2_4:323915-323934 None:intergenic 45.0%
! CCTGCAAAATAGGCCAGTTT+TGG - chr2_4:323912-323931 Msa0307400:intron 45.0%
GCAGGGACTAAAACCAAAAC+TGG + chr2_4:325333-325352 None:intergenic 45.0%
GCAGGGACTAAAACCAAAAC+TGG - chr2_4:325333-325352 Msa0307400:exon 45.0%
ACCGACATGCCTATAACCAA+AGG - chr2_4:325592-325611 Msa0307400:intron 45.0%
GACAAGCAACATGATGCTGA+AGG - chr2_4:325637-325656 Msa0307400:intron 45.0%
CATGATGCTGAAGGAGAAGA+TGG - chr2_4:325646-325665 Msa0307400:intron 45.0%
GAAGACGAAGAAGATGACGA+TGG - chr2_4:325679-325698 Msa0307400:intron 45.0%
GAAGAAGATGACGATGGAGA+TGG - chr2_4:325685-325704 Msa0307400:intron 45.0%
GAGATGGTGCATTTGGAGAA+GGG - chr2_4:325701-325720 Msa0307400:intron 45.0%
AGATGGTGCATTTGGAGAAG+GGG - chr2_4:325702-325721 Msa0307400:intron 45.0%
TTGTCATCTGAAGATGGAGC+TGG - chr2_4:325733-325752 Msa0307400:intron 45.0%
TCTGAAGATGGAGCTGGATA+CGG - chr2_4:325739-325758 Msa0307400:intron 45.0%
TCAAAGAAAGCTCCTGAAGG+TGG - chr2_4:325787-325806 Msa0307400:intron 45.0%
GGCAGATGAAAATGGAGAAG+AGG - chr2_4:325819-325838 Msa0307400:intron 45.0%
AGACAATGAAGAGGAAGAGG+AGG - chr2_4:325951-325970 Msa0307400:five_prime_UTR 45.0%
CTTTGCAGCCACCAAAGAAA+AGG - chr2_4:325989-326008 Msa0307400:five_prime_UTR 45.0%
!! ATTATTAATTAATTATTTAC+AGG - chr2_4:321127-321146 Msa0307400:intron 5.0%
!! AAAAATAAACAAATAAATAT+TGG - chr2_4:323235-323254 Msa0307400:intron 5.0%
!! AAAAAAATATAAAAAAATTC+TGG - chr2_4:324137-324156 Msa0307400:intron 5.0%
!! AAAAAAAGATTAAAAAATTA+TGG - chr2_4:324249-324268 Msa0307400:intron 5.0%
!! ATTAATAAAAATGAAAAAAA+AGG - chr2_4:324283-324302 Msa0307400:intron 5.0%
!!! TTTTAAAAAAATTAAAATTC+TGG - chr2_4:324377-324396 Msa0307400:intron 5.0%
!! AAAAAAAAATTTAAAAATTC+TGG + chr2_4:325097-325116 None:intergenic 5.0%
!!! AATATTTTTTTTTAAAATTC+TGG + chr2_4:325146-325165 None:intergenic 5.0%
!!! GAAAAAATATTAAAATTTTT+TGG + chr2_4:325183-325202 None:intergenic 5.0%
!! ATAAATAAATTAAAAAATTC+TGG + chr2_4:325231-325250 None:intergenic 5.0%
!!! AATTTTTTTTTTATAGTTTT+TGG + chr2_4:325313-325332 None:intergenic 5.0%
GCTGCCCGAAGATGTAAGTA+AGG + chr2_4:320353-320372 None:intergenic 50.0%
! CAGCGAAGTTTCGGGTAGTT+TGG + chr2_4:320410-320429 None:intergenic 50.0%
GGTGAGTGAGAGAGAAAGAG+AGG + chr2_4:320462-320481 None:intergenic 50.0%
GATGAGAGAGGTTACCAGGA+AGG + chr2_4:320625-320644 None:intergenic 50.0%
CGTACGTTAACGCGCCAAAA+CGG + chr2_4:321245-321264 None:intergenic 50.0%
TCACGAGTTATAGGCCATGG+TGG - chr2_4:321623-321642 Msa0307400:intron 50.0%
CGGATATGGTGTGACTGAGA+AGG - chr2_4:321668-321687 Msa0307400:intron 50.0%
GGTCATCTATTGTAGGACGG+AGG + chr2_4:321972-321991 None:intergenic 50.0%
! GTCTTGTTAACGAGTGCCAC+TGG - chr2_4:322216-322235 Msa0307400:intron 50.0%
AAATACTACTCCCTCCGTCC+CGG - chr2_4:322797-322816 Msa0307400:intron 50.0%
GTCAATTAAACCGGGACGGA+GGG + chr2_4:322810-322829 None:intergenic 50.0%
GGTACGTGCTTTACGCTCAA+TGG + chr2_4:323118-323137 None:intergenic 50.0%
!!! CGTGTCGTTTTGATGGGTGT+GGG - chr2_4:323145-323164 Msa0307400:intron 50.0%
!!! GTGTCGTTTTGATGGGTGTG+GGG - chr2_4:323146-323165 Msa0307400:intron 50.0%
GACGATGGAGATGGTGCATT+TGG - chr2_4:325694-325713 Msa0307400:intron 50.0%
GGAGATGGTGCATTTGGAGA+AGG - chr2_4:325700-325719 Msa0307400:intron 50.0%
GATGACGACGATGAGGAAGA+GGG - chr2_4:325892-325911 Msa0307400:intron 50.0%
GGAAGAGGAGGATGAAGATG+AGG - chr2_4:325963-325982 Msa0307400:five_prime_UTR 50.0%
! GTTTCGGGTAGTTTGGGCAG+TGG + chr2_4:320403-320422 None:intergenic 55.0%
GAGAAAGAGAGGAGAGACCC+AGG + chr2_4:320451-320470 None:intergenic 55.0%
!!! CAAAGCCACGCTTTTGGCTC+CGG - chr2_4:321305-321324 Msa0307400:intron 55.0%
ACTAACCGGAGCCAAAAGCG+TGG + chr2_4:321313-321332 None:intergenic 55.0%
!! GGGATGCTAAGAGTGTCCAG+TGG + chr2_4:322235-322254 None:intergenic 55.0%
GGTCAATTAAACCGGGACGG+AGG + chr2_4:322811-322830 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr2_4:323010-323029 Msa0307400:intron 55.0%
ACATAGTACTCCCTCCGTCC+CGG + chr2_4:323023-323042 None:intergenic 55.0%
!!! GCGTGTCGTTTTGATGGGTG+TGG - chr2_4:323144-323163 Msa0307400:intron 55.0%
AAAGCTCCTGAAGGTGGTGC+TGG - chr2_4:325793-325812 Msa0307400:intron 55.0%
GCTGGTGGGGCAGATGAAAA+TGG - chr2_4:325811-325830 Msa0307400:intron 55.0%
AGACGGTGATGACCAAGACG+AGG - chr2_4:325852-325871 Msa0307400:intron 55.0%
CCTCATCGTCATCCTCGTCT+TGG + chr2_4:325867-325886 None:intergenic 55.0%
CCAAGACGAGGATGACGATG+AGG - chr2_4:325864-325883 Msa0307400:intron 55.0%
GGATGACGACGATGAGGAAG+AGG - chr2_4:325891-325910 Msa0307400:intron 55.0%
TGAGGAAGAGGGTGGAGAAG+AGG - chr2_4:325903-325922 Msa0307400:intron 55.0%
GAGAGGAGAGACCCAGGTAC+TGG + chr2_4:320445-320464 None:intergenic 60.0%
! ATGGACGCCACGCTCCGTTT+TGG - chr2_4:321228-321247 Msa0307400:intron 60.0%
TAACGCGCCAAAACGGAGCG+TGG + chr2_4:321238-321257 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr2_4:323009-323028 Msa0307400:intron 60.0%
!! CTCCTGAAGGTGGTGCTGGT+GGG - chr2_4:325797-325816 Msa0307400:intron 60.0%
!! TCCTGAAGGTGGTGCTGGTG+GGG - chr2_4:325798-325817 Msa0307400:intron 60.0%
CGAGGATGACGATGAGGACG+AGG - chr2_4:325870-325889 Msa0307400:intron 60.0%
GGACGAGGATGACGACGATG+AGG - chr2_4:325885-325904 Msa0307400:intron 60.0%
GACGACGATGAGGAAGAGGG+TGG - chr2_4:325895-325914 Msa0307400:intron 60.0%
AGAGGGTGGAGAAGAGGACG+AGG - chr2_4:325909-325928 Msa0307400:intron 60.0%
GGAGAAGAGGACGAGGAGGA+AGG - chr2_4:325916-325935 Msa0307400:five_prime_UTR 60.0%
! GCTCCTGAAGGTGGTGCTGG+TGG - chr2_4:325796-325815 Msa0307400:intron 65.0%
GGGTGGAGAAGAGGACGAGG+AGG - chr2_4:325912-325931 Msa0307400:intron 65.0%
GCCCCACCAGCACCACCTTC+AGG + chr2_4:325802-325821 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 320278 326265 320278 ID=Msa0307400;Name=Msa0307400
chr2_4 mRNA 320278 326265 320278 ID=Msa0307400-mRNA-1;Parent=Msa0307400;Name=Msa0307400-mRNA-1;_AED=0.00;_eAED=0.00;_QI=404|1|1|1|0.5|0.33|3|245|191
chr2_4 exon 320278 320972 320278 ID=Msa0307400-mRNA-1:exon:104;Parent=Msa0307400-mRNA-1
chr2_4 exon 325217 325394 325217 ID=Msa0307400-mRNA-1:exon:103;Parent=Msa0307400-mRNA-1
chr2_4 exon 325914 326265 325914 ID=Msa0307400-mRNA-1:exon:102;Parent=Msa0307400-mRNA-1
chr2_4 five_prime_UTR 325914 326265 325914 ID=Msa0307400-mRNA-1:five_prime_utr;Parent=Msa0307400-mRNA-1
chr2_4 five_prime_UTR 325343 325394 325343 ID=Msa0307400-mRNA-1:five_prime_utr;Parent=Msa0307400-mRNA-1
chr2_4 CDS 325217 325342 325217 ID=Msa0307400-mRNA-1:cds;Parent=Msa0307400-mRNA-1
chr2_4 CDS 320523 320972 320523 ID=Msa0307400-mRNA-1:cds;Parent=Msa0307400-mRNA-1
chr2_4 three_prime_UTR 320278 320522 320278 ID=Msa0307400-mRNA-1:three_prime_utr;Parent=Msa0307400-mRNA-1
Gene Sequence

>Msa0307400

ATGGAAACTGAACAACAGAGTTCGATGATGGACGCCACGCTCCGTTTTGGCGCGTTAACGTACGCCGCAGAAGCTCTTGTAACCATGTTAGCTTCTGCTATTGTCAAAGCCACGCTTTTGGCTCCGGAACTCTATGCTTTAATGTTAACCGACATGCCTATAACCAAAGGAGAGAGTAAAACCCAAAGTCAAGACAAGCAACATGATGCTGAAGGAGAAGATGGCAATGATGATGAAGACGAAGAAGATGACGATGGAGATGGTGCATTTGGAGAAGGGGAAGATGAATTGTCATCTGAAGATGGAGCTGGATACGGCAACAATTCCAACAACAAGAGCAACTCAAAGAAAGCTCCTGAAGGTGGTGCTGGTGGGGCAGATGAAAATGGAGAAGAGGAAGATGATGAAGACGGTGATGACCAAGACGAGGATGACGATGAGGACGAGGATGACGACGATGAGGAAGAGGGTGGAGAAGAGGACGAGGAGGAAGGTGTTGATGAAGAAGACAATGAAGAGGAAGAGGAGGATGAAGATGAGGAAGCTTTGCAGCCACCAAAGAAAAGGAAGAAGTGA
Protein sequence

>Msa0307400

METEQQSSMMDATLRFGALTYAAEALVTMLASAIVKATLLAPELYALMLTDMPITKGESKTQSQDKQHDAEGEDGNDDEDEEDDDGDGAFGEGEDELSSEDGAGYGNNSNNKSNSKKAPEGGAGGADENGEEEDDEDGDDQDEDDDEDEDDDDEEEGGEEDEEEGVDEEDNEEEEEDEDEEALQPPKKRKK*