Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316620 | RHN72573.1 | 98.308 | 532 | 9 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1069 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316620 | sp|O95822|DCMC_HUMAN | 40.603 | 431 | 218 | 6 | 97 | 522 | 83 | 480 | 7.31e-94 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0197040 | Msa0316620 | 0.849573 | 2.965141e-60 | -8.615850e-47 |
| Msa0276600 | Msa0316620 | 0.849162 | 3.858552e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316620 | MtrunA17_Chr2g0289151 | 98.308 | 532 | 9 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1069 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316620 | AT4G04320.1 | 67.300 | 526 | 158 | 4 | 1 | 523 | 1 | 515 | 0.0 | 702 |
| Msa0316620 | AT4G04320.2 | 67.300 | 526 | 157 | 4 | 1 | 523 | 1 | 514 | 0.0 | 702 |
Find 142 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACTTGTTGCCTCACTTTC+AGG | 0.127574 | 2_4:+13770972 | None:intergenic |
| TATGGAACTGTTTACATATA+TGG | 0.138756 | 2_4:+13774995 | None:intergenic |
| TTGTTTGTTGTATCATTATT+TGG | 0.184858 | 2_4:+13775116 | None:intergenic |
| GCAACTTCAATGAAAATTAA+AGG | 0.210725 | 2_4:+13771129 | None:intergenic |
| AGAAAACAAGCCTTCTTCTT+TGG | 0.239154 | 2_4:+13773421 | None:intergenic |
| GATCTAAAAGGTTGCTTATA+GGG | 0.246771 | 2_4:+13772672 | None:intergenic |
| ACAAAATAACATGGAAGTTT+AGG | 0.271106 | 2_4:+13767599 | None:intergenic |
| TTTAATGCTGACGAAATTTC+CGG | 0.279448 | 2_4:+13768984 | None:intergenic |
| ATCCAATTCGTTGGTGAAAT+AGG | 0.290053 | 2_4:-13767636 | Msa0316620:three_prime_UTR |
| AAGGTTAGGCTTGTTCATTC+TGG | 0.291209 | 2_4:+13774932 | None:intergenic |
| GGAATTGGCCGTCGTTGTTT+TGG | 0.293227 | 2_4:-13772635 | Msa0316620:CDS |
| CAGGATCATCCCATGTAATT+TGG | 0.301343 | 2_4:+13772822 | None:intergenic |
| GTGTGATTGAAATTCAAATT+TGG | 0.310656 | 2_4:-13767435 | Msa0316620:three_prime_UTR |
| ACCTTCTCTTAAGATCTAAA+AGG | 0.314143 | 2_4:+13772660 | None:intergenic |
| AGATCTAAAAGGTTGCTTAT+AGG | 0.321737 | 2_4:+13772671 | None:intergenic |
| TATCAAACGTGTTGTAAAAC+TGG | 0.322632 | 2_4:-13770618 | Msa0316620:CDS |
| GAGAGATTGAATACAGTTAG+AGG | 0.328746 | 2_4:+13774894 | None:intergenic |
| ATGGAACTGTTTACATATAT+GGG | 0.331348 | 2_4:+13774996 | None:intergenic |
| GAAGCTGAATTTCCATCTTC+AGG | 0.332460 | 2_4:+13774692 | None:intergenic |
| AACTGCTGACCAGGAATTGC+TGG | 0.334898 | 2_4:+13772602 | None:intergenic |
| AGATGGTTGAAAGAATAAAT+TGG | 0.337796 | 2_4:-13768492 | Msa0316620:CDS |
| ATCCTATTTCACCAACGAAT+TGG | 0.348692 | 2_4:+13767634 | None:intergenic |
| TGTAATTTGGTGTAGCTCTA+AGG | 0.361646 | 2_4:+13772835 | None:intergenic |
| ATGGCAGACCTGTCAGAAAA+AGG | 0.373776 | 2_4:-13768469 | Msa0316620:CDS |
| ATAAGTGCTTCTTCTTCATC+AGG | 0.383084 | 2_4:+13769857 | None:intergenic |
| TCAAAGAGAACTTCATAAAC+TGG | 0.383550 | 2_4:+13773356 | None:intergenic |
| GAGGGAGAGGAGAGAGAGAA+AGG | 0.385298 | 2_4:+13774913 | None:intergenic |
| GGATGATCCTGCCTCCCTGC+TGG | 0.391993 | 2_4:-13772810 | Msa0316620:CDS |
| CGGTGAATGAATCCATTTGT+AGG | 0.397648 | 2_4:+13769004 | None:intergenic |
| TTGAATACAGTTAGAGGGAG+AGG | 0.398135 | 2_4:+13774900 | None:intergenic |
| TCATGGTGAACTATGTATAT+AGG | 0.401137 | 2_4:-13768426 | Msa0316620:intron |
| CAACCAGTGGCCGAGGGATC+TGG | 0.401400 | 2_4:-13769908 | Msa0316620:CDS |
| CTTTGATGCGCTTATGTGCC+AGG | 0.402153 | 2_4:-13768956 | Msa0316620:intron |
| GAAGAAGAGAGGAAAAGCTT+TGG | 0.405389 | 2_4:-13768761 | Msa0316620:CDS |
| TTAGATCTTAAGAGAAGGTT+GGG | 0.406886 | 2_4:-13772656 | Msa0316620:CDS |
| TAGTCTTACACGGGGTATAT+AGG | 0.411791 | 2_4:-13767564 | Msa0316620:three_prime_UTR |
| TAACAACCTCTCAGAGTTGC+CGG | 0.414194 | 2_4:+13774658 | None:intergenic |
| TATTGCTTCTTTGAGAGCAT+TGG | 0.417799 | 2_4:-13772903 | Msa0316620:CDS |
| CTTAAGAGAAGGTTGGGAAT+TGG | 0.426670 | 2_4:-13772650 | Msa0316620:CDS |
| GAGATCAATGAACAAAGTAT+TGG | 0.433413 | 2_4:-13767409 | Msa0316620:three_prime_UTR |
| TATTTACATCCAGCAATTCC+TGG | 0.439855 | 2_4:-13772611 | Msa0316620:intron |
| CACTGTTTGAGATGCCAACT+TGG | 0.442491 | 2_4:+13769952 | None:intergenic |
| TGTTGCAGAGATATTGCAAC+GGG | 0.443227 | 2_4:-13769071 | Msa0316620:intron |
| CTCTCTTCTTCTCTTTCAGT+AGG | 0.448470 | 2_4:+13768773 | None:intergenic |
| AAGAGCCACATCATGAATCC+TGG | 0.449090 | 2_4:+13769977 | None:intergenic |
| CCTCCAATCCTGGATGTTCA+AGG | 0.463608 | 2_4:+13767366 | None:intergenic |
| AATCACACACTCTTCATTGA+GGG | 0.471848 | 2_4:+13767450 | None:intergenic |
| TTTAGATCTTAAGAGAAGGT+TGG | 0.473354 | 2_4:-13772657 | Msa0316620:CDS |
| CAGGATATTTGCTCGAAGAA+TGG | 0.474521 | 2_4:+13773295 | None:intergenic |
| GATTGAAATTCAAATTTGGT+TGG | 0.474619 | 2_4:-13767431 | Msa0316620:three_prime_UTR |
| AAGTTGATCCCTGCTAAGCC+TGG | 0.476969 | 2_4:+13770653 | None:intergenic |
| GAATGTGGCTCAAACTATAC+AGG | 0.478281 | 2_4:-13771097 | Msa0316620:intron |
| GTTGCCTCACTTTCAGGTAT+CGG | 0.481314 | 2_4:+13770978 | None:intergenic |
| TGTAGGTTGTAGAAGTAAGC+AGG | 0.482342 | 2_4:+13769021 | None:intergenic |
| CTACAAATGGATTCATTCAC+CGG | 0.483764 | 2_4:-13769003 | Msa0316620:CDS |
| ACGAGTATTACCTCCAATCC+TGG | 0.484890 | 2_4:+13767356 | None:intergenic |
| TTACTTCTACAACCTACAAA+TGG | 0.485584 | 2_4:-13769016 | Msa0316620:CDS |
| GATCGTCTCAACACTCATCC+TGG | 0.497302 | 2_4:-13773335 | Msa0316620:CDS |
| AGAGGAGAGAGAGAAAGGTT+AGG | 0.497572 | 2_4:+13774918 | None:intergenic |
| GAACCAGATCCCTCGGCCAC+TGG | 0.497877 | 2_4:+13769905 | None:intergenic |
| AGAATAGGTTACACTCAAAT+CGG | 0.498283 | 2_4:-13767294 | Msa0316620:three_prime_UTR |
| ATATCACATTGTACTGGTTG+CGG | 0.500928 | 2_4:+13767506 | None:intergenic |
| CACACTCTTCATTGAGGGAT+AGG | 0.501352 | 2_4:+13767455 | None:intergenic |
| CTGGCACATAAGCGCATCAA+AGG | 0.501926 | 2_4:+13768957 | None:intergenic |
| CAATCACACACTCTTCATTG+AGG | 0.503075 | 2_4:+13767449 | None:intergenic |
| AAATTTGTCCTTGAACATCC+AGG | 0.508460 | 2_4:-13767374 | Msa0316620:three_prime_UTR |
| CATGTCACAACCAGTGGCCG+AGG | 0.509305 | 2_4:-13769915 | Msa0316620:CDS |
| TGGCACATAAGCGCATCAAA+GGG | 0.510004 | 2_4:+13768958 | None:intergenic |
| TGTCCTTGAACATCCAGGAT+TGG | 0.512728 | 2_4:-13767369 | Msa0316620:three_prime_UTR |
| TAGAGCTACACCAAATTACA+TGG | 0.513481 | 2_4:-13772832 | Msa0316620:CDS |
| ACAATCCTCACTAAACGAAA+AGG | 0.513762 | 2_4:-13775097 | Msa0316620:five_prime_UTR |
| TGATGCCTCCACTTTGAGAA+AGG | 0.513988 | 2_4:+13768446 | None:intergenic |
| TCACAGAAATCACCTGAAGA+TGG | 0.515200 | 2_4:-13774704 | Msa0316620:CDS |
| GCAACTCTCAGTCCCATCCC+AGG | 0.518470 | 2_4:-13769995 | Msa0316620:CDS |
| AACTTCATAAACTGGCTGAA+TGG | 0.519383 | 2_4:+13773364 | None:intergenic |
| ATCGCATTGAGTGGAATTTG+AGG | 0.521626 | 2_4:-13773391 | Msa0316620:CDS |
| CATTCTTCGAGCAAATATCC+TGG | 0.529527 | 2_4:-13773294 | Msa0316620:CDS |
| TGGTGTAGCTCTAAGGCAGC+AGG | 0.532979 | 2_4:+13772842 | None:intergenic |
| GATGAAGATCACTTGAAGCT+TGG | 0.537972 | 2_4:+13768018 | None:intergenic |
| GGCTTAGCAGGGATCAACTT+GGG | 0.537991 | 2_4:-13770650 | Msa0316620:CDS |
| AGGCTTAGCAGGGATCAACT+TGG | 0.540053 | 2_4:-13770651 | Msa0316620:CDS |
| TTCTCAAAGTGGAGGCATCA+TGG | 0.541050 | 2_4:-13768443 | Msa0316620:CDS |
| TATCAACAATTAAAAGTACA+AGG | 0.544231 | 2_4:+13767700 | None:intergenic |
| ATCACAATATCACATTGTAC+TGG | 0.548121 | 2_4:+13767500 | None:intergenic |
| AGAGATTGAATACAGTTAGA+GGG | 0.548387 | 2_4:+13774895 | None:intergenic |
| GTGAGTGGATCCAAAGAAGA+AGG | 0.548810 | 2_4:-13773431 | Msa0316620:CDS |
| TAACTTACGCGAGAATATCC+AGG | 0.550780 | 2_4:+13773276 | None:intergenic |
| CCGATGATGCTAGTCTTACA+CGG | 0.554436 | 2_4:-13767574 | Msa0316620:three_prime_UTR |
| CTTCTTTCTATCGCATTGAG+TGG | 0.555818 | 2_4:-13773400 | Msa0316620:CDS |
| CCTTGAACATCCAGGATTGG+AGG | 0.556096 | 2_4:-13767366 | Msa0316620:three_prime_UTR |
| GAGAAATCGAAATCAGTGTT+CGG | 0.566474 | 2_4:+13775053 | None:intergenic |
| TCTCAAACAGTGCTTGCTGA+AGG | 0.571269 | 2_4:-13769941 | Msa0316620:CDS |
| AAAATACTTACAGAAATATG+TGG | 0.572317 | 2_4:+13770581 | None:intergenic |
| CTTGGACTTGAACTTCCAGC+TGG | 0.573230 | 2_4:-13773570 | Msa0316620:intron |
| AGAGCCACATCATGAATCCT+GGG | 0.573493 | 2_4:+13769978 | None:intergenic |
| CACATCATGAATCCTGGGAT+GGG | 0.574822 | 2_4:+13769983 | None:intergenic |
| GCTCATTCATACTTCAGCAA+CGG | 0.576758 | 2_4:-13768047 | Msa0316620:CDS |
| AAGTATGTTCTCATAGAATG+TGG | 0.578509 | 2_4:+13769883 | None:intergenic |
| GCCTCACTTTCAGGTATCGG+AGG | 0.579979 | 2_4:+13770981 | None:intergenic |
| GATAAGAATCTCAAACCTCC+AGG | 0.581548 | 2_4:+13773317 | None:intergenic |
| GAATGTGGAACCAGATCCCT+CGG | 0.584295 | 2_4:+13769898 | None:intergenic |
| CATAGTCTCTAGCAAGGACA+AGG | 0.584709 | 2_4:+13773634 | None:intergenic |
| CCACATCATGAATCCTGGGA+TGG | 0.585187 | 2_4:+13769982 | None:intergenic |
| CCATCCCAGGATTCATGATG+TGG | 0.586521 | 2_4:-13769982 | Msa0316620:CDS |
| ACACTCTTCATTGAGGGATA+GGG | 0.587651 | 2_4:+13767456 | None:intergenic |
| ATTCGTTGGTGAAATAGGAT+AGG | 0.587782 | 2_4:-13767631 | Msa0316620:three_prime_UTR |
| GATGTGGCTCTTATCCAAGT+TGG | 0.588173 | 2_4:-13769966 | Msa0316620:CDS |
| CCGTGTAAGACTAGCATCAT+CGG | 0.590646 | 2_4:+13767574 | None:intergenic |
| ACATATCTAATCCAATTCGT+TGG | 0.596305 | 2_4:-13767645 | Msa0316620:three_prime_UTR |
| GGTTGAAAGAATAAATTGGA+TGG | 0.598776 | 2_4:-13768488 | Msa0316620:CDS |
| GCAGACAAAGCTCAAGTGAG+TGG | 0.600093 | 2_4:-13773446 | Msa0316620:intron |
| CTACTCTATATCATCAACTC+AGG | 0.603114 | 2_4:-13770943 | Msa0316620:intron |
| CGATGATGCTAGTCTTACAC+GGG | 0.607662 | 2_4:-13767573 | Msa0316620:three_prime_UTR |
| TGATCTTCATCGCCATGTTG+AGG | 0.608391 | 2_4:-13768006 | Msa0316620:intron |
| CAGCTGGAAGTTCAAGTCCA+AGG | 0.616110 | 2_4:+13773571 | None:intergenic |
| GATGGGACTGAGAGTTGCAA+AGG | 0.617350 | 2_4:+13770000 | None:intergenic |
| TCCTCCGATACCTGAAAGTG+AGG | 0.618435 | 2_4:-13770982 | Msa0316620:CDS |
| TCTTCTGAGAGCATACCTGA+TGG | 0.620253 | 2_4:-13767771 | Msa0316620:three_prime_UTR |
| ATTTATGTACAGATAATACA+AGG | 0.622911 | 2_4:-13767677 | Msa0316620:three_prime_UTR |
| CTACTGAAAGAGAAGAAGAG+AGG | 0.624913 | 2_4:-13768772 | Msa0316620:CDS |
| ATCACTCCGGCAACTCTGAG+AGG | 0.625330 | 2_4:-13774664 | Msa0316620:intron |
| GTAACCTATTCTCCCTCCGA+GGG | 0.625509 | 2_4:+13767305 | None:intergenic |
| GGACAAGGAGCAACTTGCGA+CGG | 0.640127 | 2_4:+13773649 | None:intergenic |
| AAAGGCCTTTCTCAAAGTGG+AGG | 0.647344 | 2_4:-13768451 | Msa0316620:CDS |
| TCATCGGTGACAAAATAACA+TGG | 0.648946 | 2_4:+13767590 | None:intergenic |
| TGAGATCATAGTCTCTAGCA+AGG | 0.650095 | 2_4:+13773628 | None:intergenic |
| TCAGCTTCGAATAATCACTC+CGG | 0.658136 | 2_4:-13774677 | Msa0316620:CDS |
| GAACTGATAAAGCAGTACCT+TGG | 0.658471 | 2_4:-13773588 | Msa0316620:CDS |
| ATGTCACAACCAGTGGCCGA+GGG | 0.659444 | 2_4:-13769914 | Msa0316620:CDS |
| GTAAATATCCAAAACAACGA+CGG | 0.660248 | 2_4:+13772627 | None:intergenic |
| GTGTTGCAGAGATATTGCAA+CGG | 0.661225 | 2_4:-13769072 | Msa0316620:intron |
| AAGAAGCCATTACCTCAACA+TGG | 0.671130 | 2_4:+13767994 | None:intergenic |
| AGGAGACATGTCACAACCAG+TGG | 0.673132 | 2_4:-13769921 | Msa0316620:CDS |
| TGTAACCTATTCTCCCTCCG+AGG | 0.676460 | 2_4:+13767304 | None:intergenic |
| AGAGCTACACCAAATTACAT+GGG | 0.690843 | 2_4:-13772831 | Msa0316620:CDS |
| CGTCTCAACACTCATCCTGG+AGG | 0.701858 | 2_4:-13773332 | Msa0316620:CDS |
| GGCACATAAGCGCATCAAAG+GGG | 0.706430 | 2_4:+13768959 | None:intergenic |
| TGTGCTTAATAACTTCTCTG+AGG | 0.713844 | 2_4:-13774424 | Msa0316620:intron |
| AGTTGCACTAATGAAGAATG+TGG | 0.715148 | 2_4:-13771112 | Msa0316620:CDS |
| TAAACGAAAAGGAAGCACAG+TGG | 0.792516 | 2_4:-13775086 | Msa0316620:five_prime_UTR |
| GATGATGCTAGTCTTACACG+GGG | 0.805150 | 2_4:-13767572 | Msa0316620:three_prime_UTR |
| GTTGCAGAGATATTGCAACG+GGG | 0.857538 | 2_4:-13769070 | Msa0316620:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTCAATTAAGATAA+CGG | - | chr2_4:13768281-13768300 | Msa0316620:intron | 10.0% |
| !!! | CAAATAAATATTGATTAAAA+AGG | + | chr2_4:13771318-13771337 | None:intergenic | 10.0% |
| !!! | TAATTTTATTAATCTTTTCT+TGG | - | chr2_4:13771900-13771919 | Msa0316620:intron | 10.0% |
| !! | GATTGTTAAATTATAAATTA+TGG | + | chr2_4:13773518-13773537 | None:intergenic | 10.0% |
| !! | TATTGACATAAAAAATAAAA+TGG | + | chr2_4:13774002-13774021 | None:intergenic | 10.0% |
| !!! | TTTCTTGTTCATTTTTTTTA+TGG | + | chr2_4:13767371-13767390 | None:intergenic | 15.0% |
| !!! | CTTTTAATTTGTTTATTTGT+TGG | - | chr2_4:13767813-13767832 | Msa0316620:intron | 15.0% |
| !!! | ATTTTTTCAATTAAGATAAC+GGG | - | chr2_4:13768282-13768301 | Msa0316620:intron | 15.0% |
| !!! | ACATTTATACTTTTATTTGA+AGG | + | chr2_4:13769290-13769309 | None:intergenic | 15.0% |
| !!! | TATAATTATTTGAAATGCTT+TGG | + | chr2_4:13769932-13769951 | None:intergenic | 15.0% |
| !! | TAATTATAAGCATATTTGAT+TGG | - | chr2_4:13769944-13769963 | Msa0316620:CDS | 15.0% |
| !! | AATTATAAGCATATTTGATT+GGG | - | chr2_4:13769945-13769964 | Msa0316620:CDS | 15.0% |
| !! | TAAAACATTAAAGAGAAAAT+CGG | - | chr2_4:13769971-13769990 | Msa0316620:CDS | 15.0% |
| !! | CAATAAATCTCTTAATAATA+TGG | + | chr2_4:13770148-13770167 | None:intergenic | 15.0% |
| !! | CATATTATTAAGAGATTTAT+TGG | - | chr2_4:13770146-13770165 | Msa0316620:intron | 15.0% |
| !!! | TCAAATTTTTATTTGTTTGT+TGG | - | chr2_4:13770901-13770920 | Msa0316620:intron | 15.0% |
| !!! | TTTTACATATATCAATTTCA+AGG | - | chr2_4:13771058-13771077 | Msa0316620:intron | 15.0% |
| !! | ATGTAATGAAAAGTTATAAA+TGG | - | chr2_4:13771439-13771458 | Msa0316620:intron | 15.0% |
| !!! | TTTAATTTTGATTCAGTATA+GGG | + | chr2_4:13773048-13773067 | None:intergenic | 15.0% |
| !!! | TTTTAATTTTGATTCAGTAT+AGG | + | chr2_4:13773049-13773068 | None:intergenic | 15.0% |
| !! | TTGTATTAATAATTTCCATA+TGG | - | chr2_4:13774167-13774186 | Msa0316620:intron | 15.0% |
| !!! | TTGTTTGTTGTATCATTATT+TGG | + | chr2_4:13767232-13767251 | None:intergenic | 20.0% |
| !!! | ATTTTCATTTTCAAATGCTT+TGG | - | chr2_4:13767735-13767754 | Msa0316620:three_prime_UTR | 20.0% |
| !! | TTTGATTCTGTTATTATTGT+TGG | - | chr2_4:13767984-13768003 | Msa0316620:intron | 20.0% |
| !!! | TTTTTTCAATTAAGATAACG+GGG | - | chr2_4:13768283-13768302 | Msa0316620:intron | 20.0% |
| !!! | TCTAATCTCAAAATTTTGTT+TGG | - | chr2_4:13768459-13768478 | Msa0316620:CDS | 20.0% |
| !!! | TATAATGATGTTAGCTTAAT+TGG | + | chr2_4:13768523-13768542 | None:intergenic | 20.0% |
| !!! | ATTTTTCATACATACACTTA+TGG | + | chr2_4:13768617-13768636 | None:intergenic | 20.0% |
| !!! | AACTTTTCAAACAAAACATA+TGG | + | chr2_4:13769107-13769126 | None:intergenic | 20.0% |
| !! | ATAAAAGAAAGATAAGACAA+GGG | - | chr2_4:13769353-13769372 | Msa0316620:intron | 20.0% |
| !! | TGAAAATTCAAGAGATTAAA+AGG | + | chr2_4:13769591-13769610 | None:intergenic | 20.0% |
| !! | ATTGAATATTATGCATACAA+CGG | + | chr2_4:13769634-13769653 | None:intergenic | 20.0% |
| !! | TAATATTCAATATCTTGTGT+AGG | - | chr2_4:13769643-13769662 | Msa0316620:intron | 20.0% |
| !! | AAAACATTAAAGAGAAAATC+GGG | - | chr2_4:13769972-13769991 | Msa0316620:CDS | 20.0% |
| !! | CAAAAATACAAATAGAACAA+TGG | - | chr2_4:13770406-13770425 | Msa0316620:intron | 20.0% |
| !!! | ATATGATTTTTCAAGTTACA+TGG | + | chr2_4:13770491-13770510 | None:intergenic | 20.0% |
| !! | GTAACTTGAAAAATCATATT+TGG | - | chr2_4:13770492-13770511 | Msa0316620:intron | 20.0% |
| !! | TCAATATTTATTTGTTTCAC+AGG | - | chr2_4:13771324-13771343 | Msa0316620:intron | 20.0% |
| !! | TAATGAAAAGTTATAAATGG+TGG | - | chr2_4:13771442-13771461 | Msa0316620:intron | 20.0% |
| !! | TTAATTCTATTATTTCGTCA+TGG | - | chr2_4:13771491-13771510 | Msa0316620:intron | 20.0% |
| !! | ATTAAAAAAACCCAAGAATA+AGG | + | chr2_4:13771558-13771577 | None:intergenic | 20.0% |
| !! | ACAGAATAAAGAAGAAAAAA+AGG | + | chr2_4:13771619-13771638 | None:intergenic | 20.0% |
| !! | AATTATGAAAATCAGATCTA+AGG | + | chr2_4:13771657-13771676 | None:intergenic | 20.0% |
| !! | AAAATACTTACAGAAATATG+TGG | + | chr2_4:13771767-13771786 | None:intergenic | 20.0% |
| !!! | AAGTATTTTTACCAATTTTG+TGG | - | chr2_4:13771778-13771797 | Msa0316620:intron | 20.0% |
| !! | AAATGAAATTTATTGCTTCA+TGG | - | chr2_4:13771824-13771843 | Msa0316620:intron | 20.0% |
| !!! | GGTTTCATTTTTTAAATTCT+TGG | - | chr2_4:13772006-13772025 | Msa0316620:intron | 20.0% |
| !!! | AGAAAAAACATATTTTGTGA+AGG | + | chr2_4:13772244-13772263 | None:intergenic | 20.0% |
| !! | AAACAAAAAAGTAAACTAAG+TGG | + | chr2_4:13772956-13772975 | None:intergenic | 20.0% |
| !!! | TTAATTTTGATTCAGTATAG+GGG | + | chr2_4:13773047-13773066 | None:intergenic | 20.0% |
| !!! | GCATTTTATAGAATGAAAAA+TGG | - | chr2_4:13773073-13773092 | Msa0316620:intron | 20.0% |
| !! | ACATTATTTGTCATCATTAA+TGG | + | chr2_4:13773183-13773202 | None:intergenic | 20.0% |
| !! | ATTTAACAATCAGAAAACTT+TGG | - | chr2_4:13773527-13773546 | Msa0316620:intron | 20.0% |
| !! | CAATTGTAATTTGAACAAAA+TGG | - | chr2_4:13773798-13773817 | Msa0316620:intron | 20.0% |
| !!! | TATCAACAATTAAAAGTACA+AGG | + | chr2_4:13774648-13774667 | None:intergenic | 20.0% |
| !! | ATTTATGTACAGATAATACA+AGG | - | chr2_4:13774668-13774687 | Msa0316620:CDS | 20.0% |
| !!! | TATAGTGATGCATTTTTTTA+AGG | + | chr2_4:13775088-13775107 | None:intergenic | 20.0% |
| ! | ATGGAACTGTTTACATATAT+GGG | + | chr2_4:13767352-13767371 | None:intergenic | 25.0% |
| ! | TATGGAACTGTTTACATATA+TGG | + | chr2_4:13767353-13767372 | None:intergenic | 25.0% |
| ! | GAGATTAGATGAAATTGAAT+TGG | + | chr2_4:13767489-13767508 | None:intergenic | 25.0% |
| !!! | ATTTTCAAATGCTTTGGAAT+TGG | - | chr2_4:13767741-13767760 | Msa0316620:three_prime_UTR | 25.0% |
| ! | TCAAATAAGAAATTTGATCG+CGG | + | chr2_4:13767969-13767988 | None:intergenic | 25.0% |
| !! | ATTTGATTTACATAACGCAA+CGG | - | chr2_4:13768009-13768028 | Msa0316620:CDS | 25.0% |
| !!! | GTACTTTTTTTTGGTGTTTA+TGG | - | chr2_4:13768097-13768116 | Msa0316620:intron | 25.0% |
| !!! | TTTTTCAATTAAGATAACGG+GGG | - | chr2_4:13768284-13768303 | Msa0316620:intron | 25.0% |
| ! | GAGAAAAATTATTACCAAAC+AGG | - | chr2_4:13768394-13768413 | Msa0316620:intron | 25.0% |
| ! | TCTATAGTGAACTTGTATAT+AGG | + | chr2_4:13768495-13768514 | None:intergenic | 25.0% |
| ! | GATAAAAGAAAGATAAGACA+AGG | - | chr2_4:13769352-13769371 | Msa0316620:intron | 25.0% |
| ! | TAAAAGAAAAACTTAGTACG+TGG | - | chr2_4:13769474-13769493 | Msa0316620:intron | 25.0% |
| ! | ACTGAACTTGATTATATACA+TGG | - | chr2_4:13769781-13769800 | Msa0316620:intron | 25.0% |
| ! | ATTATATACATGGCTAAATC+TGG | - | chr2_4:13769791-13769810 | Msa0316620:intron | 25.0% |
| ! | CCAAACAAAAACAAATTTGA+TGG | + | chr2_4:13769818-13769837 | None:intergenic | 25.0% |
| !!! | CCATCAAATTTGTTTTTGTT+TGG | - | chr2_4:13769815-13769834 | Msa0316620:intron | 25.0% |
| ! | CTTAAATAGTTTGACAAGTA+TGG | - | chr2_4:13770030-13770049 | Msa0316620:intron | 25.0% |
| !! | AGAGATTTATTGGATTTTGA+TGG | - | chr2_4:13770156-13770175 | Msa0316620:intron | 25.0% |
| !! | ATCTATTTAGTTGACTCATT+TGG | - | chr2_4:13770233-13770252 | Msa0316620:intron | 25.0% |
| ! | TGAGAGTAATGAAATATGAT+TGG | + | chr2_4:13770466-13770485 | None:intergenic | 25.0% |
| ! | AAAAATTTCATGACTTTCTC+GGG | + | chr2_4:13770625-13770644 | None:intergenic | 25.0% |
| ! | CAAAAATTTCATGACTTTCT+CGG | + | chr2_4:13770626-13770645 | None:intergenic | 25.0% |
| ! | TCATAGATCAGACATTAAAT+AGG | - | chr2_4:13770659-13770678 | Msa0316620:intron | 25.0% |
| !! | AAGCATTCAGACATTTTTAT+GGG | + | chr2_4:13770691-13770710 | None:intergenic | 25.0% |
| !! | TAAGCATTCAGACATTTTTA+TGG | + | chr2_4:13770692-13770711 | None:intergenic | 25.0% |
| !! | TTAGTAGATTTTCACATGAA+AGG | + | chr2_4:13770752-13770771 | None:intergenic | 25.0% |
| ! | TATCTATCTCTTCAAAAGAA+TGG | + | chr2_4:13770786-13770805 | None:intergenic | 25.0% |
| ! | ATTGAAAAGATTAGGATCAT+AGG | - | chr2_4:13770983-13771002 | Msa0316620:CDS | 25.0% |
| ! | GCAACTTCAATGAAAATTAA+AGG | + | chr2_4:13771219-13771238 | None:intergenic | 25.0% |
| !!! | TTAAAAAGGGTACTGAAAAA+GGG | + | chr2_4:13771304-13771323 | None:intergenic | 25.0% |
| !!! | ATTAAAAAGGGTACTGAAAA+AGG | + | chr2_4:13771305-13771324 | None:intergenic | 25.0% |
| ! | AAGGAAAATTAAGCAAAAAG+TGG | + | chr2_4:13771600-13771619 | None:intergenic | 25.0% |
| !!! | ATTTTTTAAATTCTTGGCCT+TGG | - | chr2_4:13772012-13772031 | Msa0316620:intron | 25.0% |
| ! | TTGAGATATAAATGTCTTGT+TGG | + | chr2_4:13772121-13772140 | None:intergenic | 25.0% |
| !! | ATATTCTTTTCCAATTCCAT+TGG | - | chr2_4:13772571-13772590 | Msa0316620:intron | 25.0% |
| ! | ATATAACTTACCAATGGAAT+TGG | + | chr2_4:13772584-13772603 | None:intergenic | 25.0% |
| ! | AATTCCATTGGTAAGTTATA+TGG | - | chr2_4:13772583-13772602 | Msa0316620:intron | 25.0% |
| ! | ATGTATTGAAACAGTTTACA+AGG | + | chr2_4:13772625-13772644 | None:intergenic | 25.0% |
| !! | TTTTGAACTTAAGCATGATA+AGG | + | chr2_4:13772708-13772727 | None:intergenic | 25.0% |
| ! | TAAGTTCAAAAATAGTCAGT+TGG | - | chr2_4:13772717-13772736 | Msa0316620:intron | 25.0% |
| ! | ATTAACCAATATAGAGAAGT+TGG | + | chr2_4:13772770-13772789 | None:intergenic | 25.0% |
| !!! | AAAATGAATCTCATTTTTGG+TGG | + | chr2_4:13772828-13772847 | None:intergenic | 25.0% |
| !! | GGAAAAATGAATCTCATTTT+TGG | + | chr2_4:13772831-13772850 | None:intergenic | 25.0% |
| ! | CTATTACTAGAGAGAAAATT+AGG | + | chr2_4:13772873-13772892 | None:intergenic | 25.0% |
| !!! | TAATTTTGATTCAGTATAGG+GGG | + | chr2_4:13773046-13773065 | None:intergenic | 25.0% |
| ! | AAGATAATAACCCCTAATAT+AGG | + | chr2_4:13773704-13773723 | None:intergenic | 25.0% |
| ! | TATATTAGGGGTTATTATCT+TGG | - | chr2_4:13773703-13773722 | Msa0316620:intron | 25.0% |
| ! | AATTGTGAGTTATTTGTGAT+AGG | + | chr2_4:13773783-13773802 | None:intergenic | 25.0% |
| ! | AGATGGTTGAAAGAATAAAT+TGG | - | chr2_4:13773853-13773872 | Msa0316620:intron | 25.0% |
| ! | ATAAAATGGTGAACATACTT+AGG | + | chr2_4:13773988-13774007 | None:intergenic | 25.0% |
| ! | AAAAGAATCTTTCCATTGAA+AGG | - | chr2_4:13774104-13774123 | Msa0316620:intron | 25.0% |
| ! | AATAGCAATAAGGTTGTTTA+CGG | + | chr2_4:13774468-13774487 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGATAAAACCATC+AGG | + | chr2_4:13774592-13774611 | None:intergenic | 25.0% |
| !!! | TGATGGTTTTATCAAAACAA+TGG | - | chr2_4:13774591-13774610 | Msa0316620:intron | 25.0% |
| ! | ACAAAATAACATGGAAGTTT+AGG | + | chr2_4:13774749-13774768 | None:intergenic | 25.0% |
| ! | GTGTGATTGAAATTCAAATT+TGG | - | chr2_4:13774910-13774929 | Msa0316620:CDS | 25.0% |
| ! | GATTGAAATTCAAATTTGGT+TGG | - | chr2_4:13774914-13774933 | Msa0316620:CDS | 25.0% |
| AGAGATTGAATACAGTTAGA+GGG | + | chr2_4:13767453-13767472 | None:intergenic | 30.0% | |
| GTGATGAATACATAACAGAA+CGG | - | chr2_4:13767593-13767612 | Msa0316620:three_prime_UTR | 30.0% | |
| !! | CTTTGGAATTGGAATTTGTA+TGG | - | chr2_4:13767752-13767771 | Msa0316620:three_prime_UTR | 30.0% |
| !!! | GACTCTAGAGTACTTTTTTT+TGG | - | chr2_4:13768088-13768107 | Msa0316620:intron | 30.0% |
| TTATATCTGATAACTGACAG+TGG | - | chr2_4:13768160-13768179 | Msa0316620:intron | 30.0% | |
| ! | ATTACCAAACAGGTCTATTT+TGG | - | chr2_4:13768404-13768423 | Msa0316620:intron | 30.0% |
| TTATTACCAGCTTATGTGTT+AGG | + | chr2_4:13768645-13768664 | None:intergenic | 30.0% | |
| ACATAAGCTGGTAATAATGT+AGG | - | chr2_4:13768648-13768667 | Msa0316620:intron | 30.0% | |
| CATAAGCTGGTAATAATGTA+GGG | - | chr2_4:13768649-13768668 | Msa0316620:intron | 30.0% | |
| TCAAAGAGAACTTCATAAAC+TGG | + | chr2_4:13768992-13769011 | None:intergenic | 30.0% | |
| ! | GTTGCTACTTCAAAATTTAG+TGG | - | chr2_4:13769194-13769213 | Msa0316620:intron | 30.0% |
| !! | TACAGTTGATGAAATTCCTA+CGG | - | chr2_4:13769325-13769344 | Msa0316620:intron | 30.0% |
| ! | CTTTCTTTTATCTTTTCCGT+AGG | + | chr2_4:13769344-13769363 | None:intergenic | 30.0% |
| AATATTATGCATACAACGGA+AGG | + | chr2_4:13769630-13769649 | None:intergenic | 30.0% | |
| GATCTAAAAGGTTGCTTATA+GGG | + | chr2_4:13769676-13769695 | None:intergenic | 30.0% | |
| AGATCTAAAAGGTTGCTTAT+AGG | + | chr2_4:13769677-13769696 | None:intergenic | 30.0% | |
| ! | ACCTTTTAGATCTTAAGAGA+AGG | - | chr2_4:13769684-13769703 | Msa0316620:intron | 30.0% |
| ACCTTCTCTTAAGATCTAAA+AGG | + | chr2_4:13769688-13769707 | None:intergenic | 30.0% | |
| TTTAGATCTTAAGAGAAGGT+TGG | - | chr2_4:13769688-13769707 | Msa0316620:intron | 30.0% | |
| TTAGATCTTAAGAGAAGGTT+GGG | - | chr2_4:13769689-13769708 | Msa0316620:intron | 30.0% | |
| GTAAATATCCAAAACAACGA+CGG | + | chr2_4:13769721-13769740 | None:intergenic | 30.0% | |
| AGCATTTATTGTGGAAAAGA+AGG | - | chr2_4:13769996-13770015 | Msa0316620:CDS | 30.0% | |
| ATCCTTATTATTGCTTCTGT+GGG | + | chr2_4:13770062-13770081 | None:intergenic | 30.0% | |
| GTCCATTAGTTAGAGATAAA+AGG | - | chr2_4:13770102-13770121 | Msa0316620:intron | 30.0% | |
| ! | CTCCTTTTATCTCTAACTAA+TGG | + | chr2_4:13770107-13770126 | None:intergenic | 30.0% |
| TTAGAGATAAAAGGAGAAAG+AGG | - | chr2_4:13770111-13770130 | Msa0316620:intron | 30.0% | |
| AGACTCATAATATTGAATCC+AGG | + | chr2_4:13770367-13770386 | None:intergenic | 30.0% | |
| !! | ATTTTTGTCACTTGCTTACT+TGG | + | chr2_4:13770393-13770412 | None:intergenic | 30.0% |
| ! | AAAGTCATGAAATTTTTGCG+TGG | - | chr2_4:13770628-13770647 | Msa0316620:CDS | 30.0% |
| TAGATCAGACATTAAATAGG+TGG | - | chr2_4:13770662-13770681 | Msa0316620:intron | 30.0% | |
| AGATCAGACATTAAATAGGT+GGG | - | chr2_4:13770663-13770682 | Msa0316620:intron | 30.0% | |
| GAATGCTTATGAAGAGAAAA+AGG | - | chr2_4:13770703-13770722 | Msa0316620:intron | 30.0% | |
| TGAAAATCTACTAACTTGAG+AGG | - | chr2_4:13770758-13770777 | Msa0316620:intron | 30.0% | |
| AGCGTATCATTGAAAAGATT+AGG | - | chr2_4:13770975-13770994 | Msa0316620:CDS | 30.0% | |
| AGAAGTTCTGTGAATTGTTT+GGG | + | chr2_4:13771106-13771125 | None:intergenic | 30.0% | |
| TATCAAACGTGTTGTAAAAC+TGG | - | chr2_4:13771727-13771746 | Msa0316620:intron | 30.0% | |
| TTATTGCTTCATGGAATTTG+CGG | - | chr2_4:13771833-13771852 | Msa0316620:intron | 30.0% | |
| !! | AAAAAGTGTGTCTGTTTTGA+TGG | - | chr2_4:13771951-13771970 | Msa0316620:intron | 30.0% |
| !! | GAAGTTTTTCAGAGTACAAT+AGG | - | chr2_4:13771973-13771992 | Msa0316620:intron | 30.0% |
| AAAAGAGGACTAGAAGTAAA+AGG | - | chr2_4:13772082-13772101 | Msa0316620:intron | 30.0% | |
| ATCAAAGTCGAACAACTATT+GGG | + | chr2_4:13772209-13772228 | None:intergenic | 30.0% | |
| AAGTATGTTCTCATAGAATG+TGG | + | chr2_4:13772465-13772484 | None:intergenic | 30.0% | |
| AAACAATATGTGGCTTACTT+AGG | + | chr2_4:13772521-13772540 | None:intergenic | 30.0% | |
| CCACAAGATAAAACAATATG+TGG | + | chr2_4:13772531-13772550 | None:intergenic | 30.0% | |
| !! | CCACATATTGTTTTATCTTG+TGG | - | chr2_4:13772528-13772547 | Msa0316620:intron | 30.0% |
| !!! | TGGTTTTATGTTACCATTCT+TGG | - | chr2_4:13772548-13772567 | Msa0316620:intron | 30.0% |
| TGGAAAAGAATATCCAAGAA+TGG | + | chr2_4:13772564-13772583 | None:intergenic | 30.0% | |
| GGTCTCTAAATATCTCTTAA+TGG | - | chr2_4:13772738-13772757 | Msa0316620:intron | 30.0% | |
| TTGAACCAACTTCTCTATAT+TGG | - | chr2_4:13772762-13772781 | Msa0316620:intron | 30.0% | |
| CTTCTTTCTTTCTCCTTTAA+TGG | - | chr2_4:13773005-13773024 | Msa0316620:intron | 30.0% | |
| TTACTTCTACAACCTACAAA+TGG | - | chr2_4:13773329-13773348 | Msa0316620:CDS | 30.0% | |
| TTTAATGCTGACGAAATTTC+CGG | + | chr2_4:13773364-13773383 | None:intergenic | 30.0% | |
| ! | GCAAATTTTCACTTGCAAAA+TGG | - | chr2_4:13773615-13773634 | Msa0316620:CDS | 30.0% |
| CAATTTCCAATGATAGATTC+AGG | + | chr2_4:13773651-13773670 | None:intergenic | 30.0% | |
| TAATATAGGACAGAAACTGT+TGG | + | chr2_4:13773690-13773709 | None:intergenic | 30.0% | |
| AACAGTTTCTGTCCTATATT+AGG | - | chr2_4:13773689-13773708 | Msa0316620:intron | 30.0% | |
| ACAGTTTCTGTCCTATATTA+GGG | - | chr2_4:13773690-13773709 | Msa0316620:intron | 30.0% | |
| GGTTGAAAGAATAAATTGGA+TGG | - | chr2_4:13773857-13773876 | Msa0316620:intron | 30.0% | |
| TCATGGTGAACTATGTATAT+AGG | - | chr2_4:13773919-13773938 | Msa0316620:intron | 30.0% | |
| !!! | AAGTTCTGGAACTTAGTTTT+TGG | - | chr2_4:13773957-13773976 | Msa0316620:intron | 30.0% |
| CTTATTCAAAGCAATCCATA+TGG | + | chr2_4:13774185-13774204 | None:intergenic | 30.0% | |
| ! | TTTTATTATTTGTCGCTGTG+TGG | + | chr2_4:13774545-13774564 | None:intergenic | 30.0% |
| ACATATCTAATCCAATTCGT+TGG | - | chr2_4:13774700-13774719 | Msa0316620:CDS | 30.0% | |
| GGGTATATAGGAAAAAAACT+AGG | - | chr2_4:13774793-13774812 | Msa0316620:intron | 30.0% | |
| ATCACAATATCACATTGTAC+TGG | + | chr2_4:13774848-13774867 | None:intergenic | 30.0% | |
| GAGATCAATGAACAAAGTAT+TGG | - | chr2_4:13774936-13774955 | Msa0316620:CDS | 30.0% | |
| AGAATAGGTTACACTCAAAT+CGG | - | chr2_4:13775051-13775070 | Msa0316620:five_prime_UTR | 30.0% | |
| ACAATCCTCACTAAACGAAA+AGG | - | chr2_4:13767248-13767267 | Msa0316620:three_prime_UTR | 35.0% | |
| GAGAAATCGAAATCAGTGTT+CGG | + | chr2_4:13767295-13767314 | None:intergenic | 35.0% | |
| GAGAGATTGAATACAGTTAG+AGG | + | chr2_4:13767454-13767473 | None:intergenic | 35.0% | |
| TGTGCTTAATAACTTCTCTG+AGG | - | chr2_4:13767921-13767940 | Msa0316620:intron | 35.0% | |
| ! | TTACATAACGCAACGGATTT+AGG | - | chr2_4:13768016-13768035 | Msa0316620:CDS | 35.0% |
| ACGGATTTAGGTAGTTTGAA+TGG | - | chr2_4:13768028-13768047 | Msa0316620:CDS | 35.0% | |
| AGCTTATCAAAAAACGCTAC+AGG | - | chr2_4:13768350-13768369 | Msa0316620:intron | 35.0% | |
| ATGACCAAAATAGACCTGTT+TGG | + | chr2_4:13768411-13768430 | None:intergenic | 35.0% | |
| TATGATCCTAACACATAAGC+TGG | - | chr2_4:13768636-13768655 | Msa0316620:intron | 35.0% | |
| AGAAAACAAGCCTTCTTCTT+TGG | + | chr2_4:13768927-13768946 | None:intergenic | 35.0% | |
| AACTTCATAAACTGGCTGAA+TGG | + | chr2_4:13768984-13769003 | None:intergenic | 35.0% | |
| GATATTCTCGCGTAAGTTAA+TGG | - | chr2_4:13769073-13769092 | Msa0316620:intron | 35.0% | |
| ! | TATTGCTTCTTTGAGAGCAT+TGG | - | chr2_4:13769442-13769461 | Msa0316620:intron | 35.0% |
| !! | TGTAATTTGGTGTAGCTCTA+AGG | + | chr2_4:13769513-13769532 | None:intergenic | 35.0% |
| TAGAGCTACACCAAATTACA+TGG | - | chr2_4:13769513-13769532 | Msa0316620:intron | 35.0% | |
| AGAGCTACACCAAATTACAT+GGG | - | chr2_4:13769514-13769533 | Msa0316620:intron | 35.0% | |
| TATTTACATCCAGCAATTCC+TGG | - | chr2_4:13769734-13769753 | Msa0316620:intron | 35.0% | |
| ! | GTTTGGTTTCTCTTCAAGTT+AGG | - | chr2_4:13769832-13769851 | Msa0316620:intron | 35.0% |
| AAATCGGGTAGCATTTATTG+TGG | - | chr2_4:13769987-13770006 | Msa0316620:CDS | 35.0% | |
| CATCCTTATTATTGCTTCTG+TGG | + | chr2_4:13770063-13770082 | None:intergenic | 35.0% | |
| CACAGAAGCAATAATAAGGA+TGG | - | chr2_4:13770061-13770080 | Msa0316620:intron | 35.0% | |
| ! | TTGACTCATTTGGTGAGAAA+AGG | - | chr2_4:13770243-13770262 | Msa0316620:intron | 35.0% |
| !! | CCTTTTAACTAACATCTCAG+CGG | - | chr2_4:13770330-13770349 | Msa0316620:intron | 35.0% |
| !! | AGAACAATGGTTAGCTTACA+TGG | - | chr2_4:13770419-13770438 | Msa0316620:intron | 35.0% |
| TTTGACCCAATGAATTTCAG+TGG | - | chr2_4:13770555-13770574 | Msa0316620:intron | 35.0% | |
| CTCGGGTGAAAATATAACAT+GGG | + | chr2_4:13770608-13770627 | None:intergenic | 35.0% | |
| TCTCGGGTGAAAATATAACA+TGG | + | chr2_4:13770609-13770628 | None:intergenic | 35.0% | |
| ! | CACAAAATTTTCACATGTCC+TGG | - | chr2_4:13770808-13770827 | Msa0316620:intron | 35.0% |
| ! | AACCCTTCTAAGTTCTAACT+TGG | - | chr2_4:13770839-13770858 | Msa0316620:intron | 35.0% |
| ! | ACCCTTCTAAGTTCTAACTT+GGG | - | chr2_4:13770840-13770859 | Msa0316620:intron | 35.0% |
| TCCCAAGTTAGAACTTAGAA+GGG | + | chr2_4:13770844-13770863 | None:intergenic | 35.0% | |
| !!! | TCAGTGCTTATTTTGCGATT+AGG | - | chr2_4:13770939-13770958 | Msa0316620:intron | 35.0% |
| TGGGACAAAGAAAAATCACT+CGG | + | chr2_4:13771087-13771106 | None:intergenic | 35.0% | |
| CAGAAGTTCTGTGAATTGTT+TGG | + | chr2_4:13771107-13771126 | None:intergenic | 35.0% | |
| !!! | CTGTTTTTATGTTTCTCCTC+AGG | - | chr2_4:13771189-13771208 | Msa0316620:intron | 35.0% |
| AGTTGCACTAATGAAGAATG+TGG | - | chr2_4:13771233-13771252 | Msa0316620:intron | 35.0% | |
| ! | TTGTTTCACAGGAAGTTTTG+TGG | - | chr2_4:13771335-13771354 | Msa0316620:intron | 35.0% |
| !! | TGTTTCACAGGAAGTTTTGT+GGG | - | chr2_4:13771336-13771355 | Msa0316620:intron | 35.0% |
| CTACTCTATATCATCAACTC+AGG | - | chr2_4:13771402-13771421 | Msa0316620:intron | 35.0% | |
| !! | ATTCTGAAAATTTTCCAGCC+AGG | - | chr2_4:13771674-13771693 | Msa0316620:intron | 35.0% |
| AGTACAATAGGACAACTTTC+TGG | - | chr2_4:13771985-13772004 | Msa0316620:intron | 35.0% | |
| GACTAGAAGTAAAAGGAACA+TGG | - | chr2_4:13772089-13772108 | Msa0316620:intron | 35.0% | |
| ! | TCTTGTTTCCATCATTCTAG+AGG | - | chr2_4:13772148-13772167 | Msa0316620:intron | 35.0% |
| !! | TTTCTACTCCTCTAGAATGA+TGG | + | chr2_4:13772159-13772178 | None:intergenic | 35.0% |
| CATCAAAGTCGAACAACTAT+TGG | + | chr2_4:13772210-13772229 | None:intergenic | 35.0% | |
| TTGATCGGCAATCATAGATA+CGG | + | chr2_4:13772313-13772332 | None:intergenic | 35.0% | |
| AGGTCTACACACAAATTGAT+CGG | + | chr2_4:13772328-13772347 | None:intergenic | 35.0% | |
| ATAAGTGCTTCTTCTTCATC+AGG | + | chr2_4:13772491-13772510 | None:intergenic | 35.0% | |
| TCCATTGGTAAGTTATATGG+AGG | - | chr2_4:13772586-13772605 | Msa0316620:intron | 35.0% | |
| ACCTCCATATAACTTACCAA+TGG | + | chr2_4:13772590-13772609 | None:intergenic | 35.0% | |
| TGATGATATGTCCACATAGT+GGG | + | chr2_4:13772671-13772690 | None:intergenic | 35.0% | |
| ATGATGATATGTCCACATAG+TGG | + | chr2_4:13772672-13772691 | None:intergenic | 35.0% | |
| ACTATGTGGACATATCATCA+TGG | - | chr2_4:13772671-13772690 | Msa0316620:CDS | 35.0% | |
| AGCATGATAAGGAATCATAG+TGG | + | chr2_4:13772697-13772716 | None:intergenic | 35.0% | |
| !! | TCATTTTTCCCCCCTTAAAA+TGG | - | chr2_4:13772841-13772860 | Msa0316620:CDS | 35.0% |
| ! | TTAGGCAGCTACCATTTTAA+GGG | + | chr2_4:13772855-13772874 | None:intergenic | 35.0% |
| ! | ATTAGGCAGCTACCATTTTA+AGG | + | chr2_4:13772856-13772875 | None:intergenic | 35.0% |
| ! | AGAGAAGCACAAGACAAAAT+AGG | + | chr2_4:13772906-13772925 | None:intergenic | 35.0% |
| GCAAAGATGAGAATGTAAGA+TGG | + | chr2_4:13772932-13772951 | None:intergenic | 35.0% | |
| CCAATTGTGTTCACCATTAA+AGG | + | chr2_4:13773021-13773040 | None:intergenic | 35.0% | |
| CCTTTAATGGTGAACACAAT+TGG | - | chr2_4:13773018-13773037 | Msa0316620:intron | 35.0% | |
| TTTGTCATCATTAATGGCCA+AGG | + | chr2_4:13773177-13773196 | None:intergenic | 35.0% | |
| ! | CTACAAATGGATTCATTCAC+CGG | - | chr2_4:13773342-13773361 | Msa0316620:CDS | 35.0% |
| CATTACATGTTTGCAATACC+TGG | + | chr2_4:13773410-13773429 | None:intergenic | 35.0% | |
| ! | TTTTCACTTGCAAAATGGAG+CGG | - | chr2_4:13773620-13773639 | Msa0316620:CDS | 35.0% |
| GTATGTCCTGAATCTATCAT+TGG | - | chr2_4:13773642-13773661 | Msa0316620:CDS | 35.0% | |
| CAGTTTCTGTCCTATATTAG+GGG | - | chr2_4:13773691-13773710 | Msa0316620:intron | 35.0% | |
| CTTCTTTCTGCATACTAAAG+TGG | - | chr2_4:13773732-13773751 | Msa0316620:intron | 35.0% | |
| TCACTTCTTGCTTCTCAATA+TGG | - | chr2_4:13773827-13773846 | Msa0316620:intron | 35.0% | |
| CACTTCTTGCTTCTCAATAT+GGG | - | chr2_4:13773828-13773847 | Msa0316620:intron | 35.0% | |
| AATCATGCTCTTGAAAGTTC+TGG | - | chr2_4:13773943-13773962 | Msa0316620:intron | 35.0% | |
| ! | TTGTTACTCTACCCATTTTC+TGG | - | chr2_4:13774068-13774087 | Msa0316620:intron | 35.0% |
| TTACTTCACAGCCAGAAAAT+GGG | + | chr2_4:13774082-13774101 | None:intergenic | 35.0% | |
| !! | CTTGTCATTTCATGCTTTTG+TGG | - | chr2_4:13774140-13774159 | Msa0316620:intron | 35.0% |
| ! | ATCCAATTCGTTGGTGAAAT+AGG | - | chr2_4:13774709-13774728 | Msa0316620:CDS | 35.0% |
| ATCCTATTTCACCAACGAAT+TGG | + | chr2_4:13774714-13774733 | None:intergenic | 35.0% | |
| ! | ATTCGTTGGTGAAATAGGAT+AGG | - | chr2_4:13774714-13774733 | Msa0316620:CDS | 35.0% |
| TCATCGGTGACAAAATAACA+TGG | + | chr2_4:13774758-13774777 | None:intergenic | 35.0% | |
| !! | ATATCACATTGTACTGGTTG+CGG | + | chr2_4:13774842-13774861 | None:intergenic | 35.0% |
| AATCACACACTCTTCATTGA+GGG | + | chr2_4:13774898-13774917 | None:intergenic | 35.0% | |
| !!! | CAAAGTATTGGATTTTGCAG+AGG | - | chr2_4:13774948-13774967 | Msa0316620:CDS | 35.0% |
| AAATTTGTCCTTGAACATCC+AGG | - | chr2_4:13774971-13774990 | Msa0316620:exon | 35.0% | |
| ! | TTCACAAGTTTTTGCAGAGT+GGG | + | chr2_4:13775117-13775136 | None:intergenic | 35.0% |
| ! | TTTCACAAGTTTTTGCAGAG+TGG | + | chr2_4:13775118-13775137 | None:intergenic | 35.0% |
| ! | TGCTTCCTTTTCGTTTAGTG+AGG | + | chr2_4:13767256-13767275 | None:intergenic | 40.0% |
| ! | TAAACGAAAAGGAAGCACAG+TGG | - | chr2_4:13767259-13767278 | Msa0316620:three_prime_UTR | 40.0% |
| ! | AAGGTTAGGCTTGTTCATTC+TGG | + | chr2_4:13767416-13767435 | None:intergenic | 40.0% |
| TTGAATACAGTTAGAGGGAG+AGG | + | chr2_4:13767448-13767467 | None:intergenic | 40.0% | |
| ! | ATTCTGCTGCTGCATTTTAC+TGG | + | chr2_4:13767621-13767640 | None:intergenic | 40.0% |
| TCACAGAAATCACCTGAAGA+TGG | - | chr2_4:13767641-13767660 | Msa0316620:three_prime_UTR | 40.0% | |
| GAAGCTGAATTTCCATCTTC+AGG | + | chr2_4:13767656-13767675 | None:intergenic | 40.0% | |
| TCAGCTTCGAATAATCACTC+CGG | - | chr2_4:13767668-13767687 | Msa0316620:three_prime_UTR | 40.0% | |
| ! | TTGGTGTTTATGGCTCTGTT+AGG | - | chr2_4:13768107-13768126 | Msa0316620:intron | 40.0% |
| CTCTGTTAGGCACAAAATAG+CGG | - | chr2_4:13768120-13768139 | Msa0316620:intron | 40.0% | |
| TGAGATCATAGTCTCTAGCA+AGG | + | chr2_4:13768720-13768739 | None:intergenic | 40.0% | |
| GAACTGATAAAGCAGTACCT+TGG | - | chr2_4:13768757-13768776 | Msa0316620:CDS | 40.0% | |
| CATACAAATCACTTACCAGC+TGG | + | chr2_4:13768793-13768812 | None:intergenic | 40.0% | |
| TGTATGAGTGTGAATGTGCA+TGG | - | chr2_4:13768807-13768826 | Msa0316620:intron | 40.0% | |
| GTATGAGTGTGAATGTGCAT+GGG | - | chr2_4:13768808-13768827 | Msa0316620:intron | 40.0% | |
| CTTCTTTCTATCGCATTGAG+TGG | - | chr2_4:13768945-13768964 | Msa0316620:intron | 40.0% | |
| ATCGCATTGAGTGGAATTTG+AGG | - | chr2_4:13768954-13768973 | Msa0316620:intron | 40.0% | |
| GATAAGAATCTCAAACCTCC+AGG | + | chr2_4:13769031-13769050 | None:intergenic | 40.0% | |
| CAGGATATTTGCTCGAAGAA+TGG | + | chr2_4:13769053-13769072 | None:intergenic | 40.0% | |
| CATTCTTCGAGCAAATATCC+TGG | - | chr2_4:13769051-13769070 | Msa0316620:CDS | 40.0% | |
| TAACTTACGCGAGAATATCC+AGG | + | chr2_4:13769072-13769091 | None:intergenic | 40.0% | |
| !! | CTCAAGTCCTTTTTGCTATG+AGG | - | chr2_4:13769263-13769282 | Msa0316620:intron | 40.0% |
| TGAAGGTCCTCATAGCAAAA+AGG | + | chr2_4:13769273-13769292 | None:intergenic | 40.0% | |
| !! | AGGGTTCTACTTTGCTTTTC+TGG | - | chr2_4:13769372-13769391 | Msa0316620:intron | 40.0% |
| ! | GACTTTTCAATTACGCAGAG+AGG | - | chr2_4:13769415-13769434 | Msa0316620:intron | 40.0% |
| CAGGATCATCCCATGTAATT+TGG | + | chr2_4:13769526-13769545 | None:intergenic | 40.0% | |
| ! | AGCAACAATTTTCTCCAGCA+GGG | + | chr2_4:13769552-13769571 | None:intergenic | 40.0% |
| ! | AAGCAACAATTTTCTCCAGC+AGG | + | chr2_4:13769553-13769572 | None:intergenic | 40.0% |
| CTTAAGAGAAGGTTGGGAAT+TGG | - | chr2_4:13769695-13769714 | Msa0316620:intron | 40.0% | |
| GACCCACAGAAGCAATAATA+AGG | - | chr2_4:13770057-13770076 | Msa0316620:intron | 40.0% | |
| AAGGATGGTAGACTAGATAG+AGG | - | chr2_4:13770076-13770095 | Msa0316620:intron | 40.0% | |
| ! | TCATTTGGTGAGAAAAGGCT+TGG | - | chr2_4:13770248-13770267 | Msa0316620:intron | 40.0% |
| CCGCTGAGATGTTAGTTAAA+AGG | + | chr2_4:13770333-13770352 | None:intergenic | 40.0% | |
| GAGATCCATTCCCACAATAT+TGG | + | chr2_4:13770584-13770603 | None:intergenic | 40.0% | |
| CTCCCAAGTTAGAACTTAGA+AGG | + | chr2_4:13770845-13770864 | None:intergenic | 40.0% | |
| TATGTGACACAACAGTAGTG+GGG | + | chr2_4:13770874-13770893 | None:intergenic | 40.0% | |
| GTATGTGACACAACAGTAGT+GGG | + | chr2_4:13770875-13770894 | None:intergenic | 40.0% | |
| AGTATGTGACACAACAGTAG+TGG | + | chr2_4:13770876-13770895 | None:intergenic | 40.0% | |
| GAAAATTAAAGGTTCGCCTG+AGG | + | chr2_4:13771208-13771227 | None:intergenic | 40.0% | |
| GAATGTGGCTCAAACTATAC+AGG | - | chr2_4:13771248-13771267 | Msa0316620:intron | 40.0% | |
| ! | TATTTCGTCATGGTGACGTT+AGG | - | chr2_4:13771501-13771520 | Msa0316620:intron | 40.0% |
| !!! | GGGTTTTTTTAATCCCTCTC+TGG | - | chr2_4:13771565-13771584 | Msa0316620:intron | 40.0% |
| GTGGCAATAAATTCCAGAGA+GGG | + | chr2_4:13771581-13771600 | None:intergenic | 40.0% | |
| AGTGGCAATAAATTCCAGAG+AGG | + | chr2_4:13771582-13771601 | None:intergenic | 40.0% | |
| TTCAGAGAGCTCCACAAAAT+TGG | + | chr2_4:13771792-13771811 | None:intergenic | 40.0% | |
| TGGAGCTCTCTGAATTTGAA+GGG | - | chr2_4:13771798-13771817 | Msa0316620:intron | 40.0% | |
| !!! | GAATCTCATTTTTGGTGGCT+TGG | + | chr2_4:13772823-13772842 | None:intergenic | 40.0% |
| ! | TAGGCAGCTACCATTTTAAG+GGG | + | chr2_4:13772854-13772873 | None:intergenic | 40.0% |
| GTGTTGCAGAGATATTGCAA+CGG | - | chr2_4:13773273-13773292 | Msa0316620:intron | 40.0% | |
| TGTTGCAGAGATATTGCAAC+GGG | - | chr2_4:13773274-13773293 | Msa0316620:intron | 40.0% | |
| GATATTGCAACGGGGAAAAA+CGG | - | chr2_4:13773283-13773302 | Msa0316620:intron | 40.0% | |
| TGTAGGTTGTAGAAGTAAGC+AGG | + | chr2_4:13773327-13773346 | None:intergenic | 40.0% | |
| CGGTGAATGAATCCATTTGT+AGG | + | chr2_4:13773344-13773363 | None:intergenic | 40.0% | |
| CTCTCTTCTTCTCTTTCAGT+AGG | + | chr2_4:13773575-13773594 | None:intergenic | 40.0% | |
| CTACTGAAAGAGAAGAAGAG+AGG | - | chr2_4:13773573-13773592 | Msa0316620:CDS | 40.0% | |
| GAAGAAGAGAGGAAAAGCTT+TGG | - | chr2_4:13773584-13773603 | Msa0316620:CDS | 40.0% | |
| GAAAAAGGCCTTTCTCAAAG+TGG | - | chr2_4:13773891-13773910 | Msa0316620:intron | 40.0% | |
| CTTACTTCACAGCCAGAAAA+TGG | + | chr2_4:13774083-13774102 | None:intergenic | 40.0% | |
| !!! | CATTTTCTGGCTGTGAAGTA+AGG | - | chr2_4:13774081-13774100 | Msa0316620:intron | 40.0% |
| ACAGTCATTGCTCCTTTCAA+TGG | + | chr2_4:13774119-13774138 | None:intergenic | 40.0% | |
| TATGTTATCCAGACTGCAGT+AGG | + | chr2_4:13774269-13774288 | None:intergenic | 40.0% | |
| GCTCATTCATACTTCAGCAA+CGG | - | chr2_4:13774298-13774317 | Msa0316620:intron | 40.0% | |
| GATGAAGATCACTTGAAGCT+TGG | + | chr2_4:13774330-13774349 | None:intergenic | 40.0% | |
| AAGAAGCCATTACCTCAACA+TGG | + | chr2_4:13774354-13774373 | None:intergenic | 40.0% | |
| GGGCAAAGCTAATAGCAATA+AGG | + | chr2_4:13774478-13774497 | None:intergenic | 40.0% | |
| AGACTTGAGAGAGGTAAGAA+GGG | + | chr2_4:13774498-13774517 | None:intergenic | 40.0% | |
| AAGACTTGAGAGAGGTAAGA+AGG | + | chr2_4:13774499-13774518 | None:intergenic | 40.0% | |
| ! | TAGTCTTACACGGGGTATAT+AGG | - | chr2_4:13774781-13774800 | Msa0316620:intron | 40.0% |
| ACACTCTTCATTGAGGGATA+GGG | + | chr2_4:13774892-13774911 | None:intergenic | 40.0% | |
| CAATCACACACTCTTCATTG+AGG | + | chr2_4:13774899-13774918 | None:intergenic | 40.0% | |
| AGAGGAGAGAGAGAAAGGTT+AGG | + | chr2_4:13767430-13767449 | None:intergenic | 45.0% | |
| TAACAACCTCTCAGAGTTGC+CGG | + | chr2_4:13767690-13767709 | None:intergenic | 45.0% | |
| CATAGTCTCTAGCAAGGACA+AGG | + | chr2_4:13768714-13768733 | None:intergenic | 45.0% | |
| TGTGCTGTGAGAGAACTGTT+TGG | - | chr2_4:13768871-13768890 | Msa0316620:intron | 45.0% | |
| GTGCTGTGAGAGAACTGTTT+GGG | - | chr2_4:13768872-13768891 | Msa0316620:intron | 45.0% | |
| ! | GTGAGAGAACTGTTTGGGTT+TGG | - | chr2_4:13768877-13768896 | Msa0316620:intron | 45.0% |
| GTGAGTGGATCCAAAGAAGA+AGG | - | chr2_4:13768914-13768933 | Msa0316620:intron | 45.0% | |
| ! | AACAATTTTCTCCAGCAGGG+AGG | + | chr2_4:13769549-13769568 | None:intergenic | 45.0% |
| TCAGCGGACACTATTTAACC+TGG | - | chr2_4:13770346-13770365 | Msa0316620:intron | 45.0% | |
| GGCGACCACTGAAATTCATT+GGG | + | chr2_4:13770563-13770582 | None:intergenic | 45.0% | |
| TGGCGACCACTGAAATTCAT+TGG | + | chr2_4:13770564-13770583 | None:intergenic | 45.0% | |
| TTCAGTGGTCGCCAATATTG+TGG | - | chr2_4:13770570-13770589 | Msa0316620:intron | 45.0% | |
| TCAGTGGTCGCCAATATTGT+GGG | - | chr2_4:13770571-13770590 | Msa0316620:intron | 45.0% | |
| ! | TAGAAGGGTTTTGCATGACC+AGG | + | chr2_4:13770829-13770848 | None:intergenic | 45.0% |
| ! | GTTGCCTCACTTTCAGGTAT+CGG | + | chr2_4:13771370-13771389 | None:intergenic | 45.0% |
| GTGGAGCTCTCTGAATTTGA+AGG | - | chr2_4:13771797-13771816 | Msa0316620:intron | 45.0% | |
| AGCTCTCTGAATTTGAAGGG+TGG | - | chr2_4:13771801-13771820 | Msa0316620:intron | 45.0% | |
| TACCCAAAGCTGCAGCTTTA+TGG | - | chr2_4:13772046-13772065 | Msa0316620:intron | 45.0% | |
| AGCCATAAAGCTGCAGCTTT+GGG | + | chr2_4:13772051-13772070 | None:intergenic | 45.0% | |
| AAGCCATAAAGCTGCAGCTT+TGG | + | chr2_4:13772052-13772071 | None:intergenic | 45.0% | |
| GGCTTCAGTGTTCTCAAAAG+AGG | - | chr2_4:13772067-13772086 | Msa0316620:intron | 45.0% | |
| TCGGCAATCATAGATACGGA+GGG | + | chr2_4:13772309-13772328 | None:intergenic | 45.0% | |
| ATCGGCAATCATAGATACGG+AGG | + | chr2_4:13772310-13772329 | None:intergenic | 45.0% | |
| CACATCATGAATCCTGGGAT+GGG | + | chr2_4:13772365-13772384 | None:intergenic | 45.0% | |
| AGAGCCACATCATGAATCCT+GGG | + | chr2_4:13772370-13772389 | None:intergenic | 45.0% | |
| AAGAGCCACATCATGAATCC+TGG | + | chr2_4:13772371-13772390 | None:intergenic | 45.0% | |
| GATGTGGCTCTTATCCAAGT+TGG | - | chr2_4:13772379-13772398 | Msa0316620:intron | 45.0% | |
| ! | CACTGTTTGAGATGCCAACT+TGG | + | chr2_4:13772396-13772415 | None:intergenic | 45.0% |
| ! | TCTCAAACAGTGCTTGCTGA+AGG | - | chr2_4:13772404-13772423 | Msa0316620:intron | 45.0% |
| ! | CCACATAGTGGGAAAACGTT+TGG | + | chr2_4:13772660-13772679 | None:intergenic | 45.0% |
| ! | CCAAACGTTTTCCCACTATG+TGG | - | chr2_4:13772657-13772676 | Msa0316620:CDS | 45.0% |
| !! | AGGCAGCTACCATTTTAAGG+GGG | + | chr2_4:13772853-13772872 | None:intergenic | 45.0% |
| GTTGCAGAGATATTGCAACG+GGG | - | chr2_4:13773275-13773294 | Msa0316620:intron | 45.0% | |
| TGGCACATAAGCGCATCAAA+GGG | + | chr2_4:13773390-13773409 | None:intergenic | 45.0% | |
| GCTTCTCAATATGGGACAGA+TGG | - | chr2_4:13773836-13773855 | Msa0316620:intron | 45.0% | |
| ATGGCAGACCTGTCAGAAAA+AGG | - | chr2_4:13773876-13773895 | Msa0316620:intron | 45.0% | |
| ! | GAGAAAGGCCTTTTTCTGAC+AGG | + | chr2_4:13773887-13773906 | None:intergenic | 45.0% |
| AAAGGCCTTTCTCAAAGTGG+AGG | - | chr2_4:13773894-13773913 | Msa0316620:intron | 45.0% | |
| ! | TGATGCCTCCACTTTGAGAA+AGG | + | chr2_4:13773902-13773921 | None:intergenic | 45.0% |
| !! | TTCTCAAAGTGGAGGCATCA+TGG | - | chr2_4:13773902-13773921 | Msa0316620:intron | 45.0% |
| TGATCTTCATCGCCATGTTG+AGG | - | chr2_4:13774339-13774358 | Msa0316620:intron | 45.0% | |
| TCATCGCCATGTTGAGGTAA+TGG | - | chr2_4:13774345-13774364 | Msa0316620:intron | 45.0% | |
| ACGAGGTTAAGACTTGAGAG+AGG | + | chr2_4:13774507-13774526 | None:intergenic | 45.0% | |
| ! | TCTTCTGAGAGCATACCTGA+TGG | - | chr2_4:13774574-13774593 | Msa0316620:intron | 45.0% |
| CCGTGTAAGACTAGCATCAT+CGG | + | chr2_4:13774774-13774793 | None:intergenic | 45.0% | |
| !! | CCGATGATGCTAGTCTTACA+CGG | - | chr2_4:13774771-13774790 | Msa0316620:intron | 45.0% |
| !! | CGATGATGCTAGTCTTACAC+GGG | - | chr2_4:13774772-13774791 | Msa0316620:intron | 45.0% |
| !! | GATGATGCTAGTCTTACACG+GGG | - | chr2_4:13774773-13774792 | Msa0316620:intron | 45.0% |
| ! | TGGTTGCGGTTTTCTAAGCA+CGG | + | chr2_4:13774828-13774847 | None:intergenic | 45.0% |
| CACACTCTTCATTGAGGGAT+AGG | + | chr2_4:13774893-13774912 | None:intergenic | 45.0% | |
| TGTCCTTGAACATCCAGGAT+TGG | - | chr2_4:13774976-13774995 | Msa0316620:exon | 45.0% | |
| ACGAGTATTACCTCCAATCC+TGG | + | chr2_4:13774992-13775011 | None:intergenic | 45.0% | |
| ! | CTCTGTTTAGCGTTTTCCCT+CGG | - | chr2_4:13775024-13775043 | Msa0316620:five_prime_UTR | 45.0% |
| !!! | AAATAAATATTGATTAAAAA+GGG | + | chr2_4:13771317-13771336 | None:intergenic | 5.0% |
| !! | ATTGTTAAATTATAAATTAT+GGG | + | chr2_4:13773517-13773536 | None:intergenic | 5.0% |
| CAGCTGGAAGTTCAAGTCCA+AGG | + | chr2_4:13768777-13768796 | None:intergenic | 50.0% | |
| CTTGGACTTGAACTTCCAGC+TGG | - | chr2_4:13768775-13768794 | Msa0316620:CDS | 50.0% | |
| GCAGACAAAGCTCAAGTGAG+TGG | - | chr2_4:13768899-13768918 | Msa0316620:intron | 50.0% | |
| GATCGTCTCAACACTCATCC+TGG | - | chr2_4:13769010-13769029 | Msa0316620:CDS | 50.0% | |
| ! | GGAATTGGCCGTCGTTGTTT+TGG | - | chr2_4:13769710-13769729 | Msa0316620:intron | 50.0% |
| AACTGCTGACCAGGAATTGC+TGG | + | chr2_4:13769746-13769765 | None:intergenic | 50.0% | |
| GTGTTAGAGAACTGCTGACC+AGG | + | chr2_4:13769755-13769774 | None:intergenic | 50.0% | |
| GGTCGCCAATATTGTGGGAA+TGG | - | chr2_4:13770576-13770595 | Msa0316620:intron | 50.0% | |
| TCCTCCGATACCTGAAAGTG+AGG | - | chr2_4:13771363-13771382 | Msa0316620:intron | 50.0% | |
| ! | GCACTTGTTGCCTCACTTTC+AGG | + | chr2_4:13771376-13771395 | None:intergenic | 50.0% |
| ! | ATCCCCAGTGAAAAGCACAC+TGG | - | chr2_4:13771531-13771550 | Msa0316620:intron | 50.0% |
| ! | TCCCCAGTGAAAAGCACACT+GGG | - | chr2_4:13771532-13771551 | Msa0316620:intron | 50.0% |
| !! | AGCACACTGGGCCTTATTCT+TGG | - | chr2_4:13771544-13771563 | Msa0316620:intron | 50.0% |
| !! | GCACACTGGGCCTTATTCTT+GGG | - | chr2_4:13771545-13771564 | Msa0316620:intron | 50.0% |
| ! | ATTTTCCAGCCAGGCTTAGC+AGG | - | chr2_4:13771683-13771702 | Msa0316620:intron | 50.0% |
| ! | TTTTCCAGCCAGGCTTAGCA+GGG | - | chr2_4:13771684-13771703 | Msa0316620:intron | 50.0% |
| ! | AAGTTGATCCCTGCTAAGCC+TGG | + | chr2_4:13771695-13771714 | None:intergenic | 50.0% |
| AGGCTTAGCAGGGATCAACT+TGG | - | chr2_4:13771694-13771713 | Msa0316620:intron | 50.0% | |
| GGCTTAGCAGGGATCAACTT+GGG | - | chr2_4:13771695-13771714 | Msa0316620:intron | 50.0% | |
| TGGGTAGAGGAAAAGGTCCA+AGG | + | chr2_4:13772032-13772051 | None:intergenic | 50.0% | |
| !! | GCAGCTTTGGGTAGAGGAAA+AGG | + | chr2_4:13772039-13772058 | None:intergenic | 50.0% |
| !! | AAAGCTGCAGCTTTGGGTAG+AGG | + | chr2_4:13772045-13772064 | None:intergenic | 50.0% |
| GATGGGACTGAGAGTTGCAA+AGG | + | chr2_4:13772348-13772367 | None:intergenic | 50.0% | |
| CCACATCATGAATCCTGGGA+TGG | + | chr2_4:13772366-13772385 | None:intergenic | 50.0% | |
| CCATCCCAGGATTCATGATG+TGG | - | chr2_4:13772363-13772382 | Msa0316620:intron | 50.0% | |
| AGGAGACATGTCACAACCAG+TGG | - | chr2_4:13772424-13772443 | Msa0316620:intron | 50.0% | |
| GAATGTGGAACCAGATCCCT+CGG | + | chr2_4:13772450-13772469 | None:intergenic | 50.0% | |
| !! | GGCAGCTACCATTTTAAGGG+GGG | + | chr2_4:13772852-13772871 | None:intergenic | 50.0% |
| AGCACGACTCAAACATGCCT+TGG | - | chr2_4:13773157-13773176 | Msa0316620:intron | 50.0% | |
| TGCAACGGGGAAAAACGGAA+TGG | - | chr2_4:13773288-13773307 | Msa0316620:CDS | 50.0% | |
| GGCACATAAGCGCATCAAAG+GGG | + | chr2_4:13773389-13773408 | None:intergenic | 50.0% | |
| CTGGCACATAAGCGCATCAA+AGG | + | chr2_4:13773391-13773410 | None:intergenic | 50.0% | |
| CTTTGATGCGCTTATGTGCC+AGG | - | chr2_4:13773389-13773408 | Msa0316620:CDS | 50.0% | |
| TGACAACACCTACTGCAGTC+TGG | - | chr2_4:13774258-13774277 | Msa0316620:intron | 50.0% | |
| ! | GGTTGCGGTTTTCTAAGCAC+GGG | + | chr2_4:13774827-13774846 | None:intergenic | 50.0% |
| CCTCCAATCCTGGATGTTCA+AGG | + | chr2_4:13774982-13775001 | None:intergenic | 50.0% | |
| CCTTGAACATCCAGGATTGG+AGG | - | chr2_4:13774979-13774998 | Msa0316620:exon | 50.0% | |
| ! | TGTTTAGCGTTTTCCCTCGG+AGG | - | chr2_4:13775027-13775046 | Msa0316620:five_prime_UTR | 50.0% |
| ! | GTTTAGCGTTTTCCCTCGGA+GGG | - | chr2_4:13775028-13775047 | Msa0316620:five_prime_UTR | 50.0% |
| ! | TTTTCCCTCGGAGGGAGAAT+AGG | - | chr2_4:13775036-13775055 | Msa0316620:five_prime_UTR | 50.0% |
| GTAACCTATTCTCCCTCCGA+GGG | + | chr2_4:13775043-13775062 | None:intergenic | 50.0% | |
| TGTAACCTATTCTCCCTCCG+AGG | + | chr2_4:13775044-13775063 | None:intergenic | 50.0% | |
| GAGGGAGAGGAGAGAGAGAA+AGG | + | chr2_4:13767435-13767454 | None:intergenic | 55.0% | |
| ATCACTCCGGCAACTCTGAG+AGG | - | chr2_4:13767681-13767700 | Msa0316620:three_prime_UTR | 55.0% | |
| GGACAAGGAGCAACTTGCGA+CGG | + | chr2_4:13768699-13768718 | None:intergenic | 55.0% | |
| CGTCTCAACACTCATCCTGG+AGG | - | chr2_4:13769013-13769032 | Msa0316620:CDS | 55.0% | |
| !! | TGGTGTAGCTCTAAGGCAGC+AGG | + | chr2_4:13769506-13769525 | None:intergenic | 55.0% |
| ! | ATTTTCTCCAGCAGGGAGGC+AGG | + | chr2_4:13769545-13769564 | None:intergenic | 55.0% |
| !! | GCCTCACTTTCAGGTATCGG+AGG | + | chr2_4:13771367-13771386 | None:intergenic | 55.0% |
| ! | GCCCAGTGTGCTTTTCACTG+GGG | + | chr2_4:13771536-13771555 | None:intergenic | 55.0% |
| ! | GGCCCAGTGTGCTTTTCACT+GGG | + | chr2_4:13771537-13771556 | None:intergenic | 55.0% |
| ! | AGGCCCAGTGTGCTTTTCAC+TGG | + | chr2_4:13771538-13771557 | None:intergenic | 55.0% |
| ATGTCACAACCAGTGGCCGA+GGG | - | chr2_4:13772431-13772450 | Msa0316620:intron | 55.0% | |
| GGCTGCAAACAATGGCAACG+AGG | + | chr2_4:13774524-13774543 | None:intergenic | 55.0% | |
| CGCTGTGTGGCTGCAAACAA+TGG | + | chr2_4:13774532-13774551 | None:intergenic | 55.0% | |
| TGATCCCTGCTAAGCCTGGC+TGG | + | chr2_4:13771691-13771710 | None:intergenic | 60.0% | |
| GCAACTCTCAGTCCCATCCC+AGG | - | chr2_4:13772350-13772369 | Msa0316620:intron | 60.0% | |
| CATGTCACAACCAGTGGCCG+AGG | - | chr2_4:13772430-13772449 | Msa0316620:intron | 60.0% | |
| GGATGATCCTGCCTCCCTGC+TGG | - | chr2_4:13769535-13769554 | Msa0316620:intron | 65.0% | |
| CAACCAGTGGCCGAGGGATC+TGG | - | chr2_4:13772437-13772456 | Msa0316620:intron | 65.0% | |
| GAACCAGATCCCTCGGCCAC+TGG | + | chr2_4:13772443-13772462 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 13767200 | 13775167 | 13767200 | ID=Msa0316620;Name=Msa0316620 |
| chr2_4 | mRNA | 13767200 | 13775167 | 13767200 | ID=Msa0316620-mRNA-1;Parent=Msa0316620;Name=Msa0316620-mRNA-1;_AED=0.16;_eAED=0.16;_QI=179|1|1|1|0.86|0.81|16|608|532 |
| chr2_4 | exon | 13767200 | 13767825 | 13767200 | ID=Msa0316620-mRNA-1:exon:5220;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13768007 | 13768091 | 13768007 | ID=Msa0316620-mRNA-1:exon:5219;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13768427 | 13768512 | 13768427 | ID=Msa0316620-mRNA-1:exon:5218;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13768726 | 13768798 | 13768726 | ID=Msa0316620-mRNA-1:exon:5217;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13768957 | 13769085 | 13768957 | ID=Msa0316620-mRNA-1:exon:5216;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13769845 | 13770023 | 13769845 | ID=Msa0316620-mRNA-1:exon:5215;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13770592 | 13770675 | 13770592 | ID=Msa0316620-mRNA-1:exon:5214;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13770944 | 13771021 | 13770944 | ID=Msa0316620-mRNA-1:exon:5213;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13771098 | 13771156 | 13771098 | ID=Msa0316620-mRNA-1:exon:5212;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13772612 | 13772702 | 13772612 | ID=Msa0316620-mRNA-1:exon:5211;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13772790 | 13772934 | 13772790 | ID=Msa0316620-mRNA-1:exon:5210;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13773284 | 13773464 | 13773284 | ID=Msa0316620-mRNA-1:exon:5209;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13773571 | 13773697 | 13773571 | ID=Msa0316620-mRNA-1:exon:5208;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13774425 | 13774515 | 13774425 | ID=Msa0316620-mRNA-1:exon:5207;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13774665 | 13774756 | 13774665 | ID=Msa0316620-mRNA-1:exon:5206;Parent=Msa0316620-mRNA-1 |
| chr2_4 | exon | 13774908 | 13775167 | 13774908 | ID=Msa0316620-mRNA-1:exon:5205;Parent=Msa0316620-mRNA-1 |
| chr2_4 | five_prime_UTR | 13774989 | 13775167 | 13774989 | ID=Msa0316620-mRNA-1:five_prime_utr;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13774908 | 13774988 | 13774908 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13774665 | 13774756 | 13774665 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13774425 | 13774515 | 13774425 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13773571 | 13773697 | 13773571 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13773284 | 13773464 | 13773284 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13772790 | 13772934 | 13772790 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13772612 | 13772702 | 13772612 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13771098 | 13771156 | 13771098 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13770944 | 13771021 | 13770944 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13770592 | 13770675 | 13770592 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13769845 | 13770023 | 13769845 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13768957 | 13769085 | 13768957 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13768726 | 13768798 | 13768726 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13768427 | 13768512 | 13768427 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13768007 | 13768091 | 13768007 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | CDS | 13767808 | 13767825 | 13767808 | ID=Msa0316620-mRNA-1:cds;Parent=Msa0316620-mRNA-1 |
| chr2_4 | three_prime_UTR | 13767200 | 13767807 | 13767200 | ID=Msa0316620-mRNA-1:three_prime_utr;Parent=Msa0316620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
