AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0319450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0319450 MtrunA17_Chr2g0293881 90.865 208 17 1 1 208 1 206 7.19e-134 395
Msa0319450 MtrunA17_Chr2g0293841 86.747 166 22 0 43 208 1 166 4.72e-94 295
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0319450 AT3G17205.2 55.952 168 74 0 43 210 1 168 5.15e-55 189
Msa0319450 AT3G17205.1 55.952 168 74 0 43 210 1 168 5.39e-55 189
Msa0319450 AT3G17205.3 55.952 168 74 0 43 210 1 168 5.39e-55 189

Find 36 sgRNAs with CRISPR-Local

Find 498 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGCTGCACTTCAGATTC+AGG 0.180118 2_4:-19166166 Msa0319450:intron
AGTTCTTTCCATAGATATTA+AGG 0.233308 2_4:+19164188 None:intergenic
CAGAAATTCCTTAATATCTA+TGG 0.249440 2_4:-19164196 Msa0319450:CDS
CTCTGATACTCTCAGGATTC+AGG 0.256323 2_4:-19167573 Msa0319450:intron
GAATCATAAATGCGTTGATT+TGG 0.286902 2_4:-19166280 Msa0319450:CDS
TCTTCTTGAACAAGCTCAAT+TGG 0.325823 2_4:-19167603 Msa0319450:CDS
TTTCTGCATTAAAGAAATAT+AGG 0.326786 2_4:+19163958 None:intergenic
AATCATAAATGCGTTGATTT+GGG 0.334053 2_4:-19166279 Msa0319450:CDS
TGTGCATTCAGGAAAGCTTT+TGG 0.337771 2_4:-19164008 Msa0319450:intron
TCTTTCGAATCAACGCGTAT+AGG 0.337856 2_4:+19167641 None:intergenic
AACATCACCTGTCAACATTA+AGG 0.359774 2_4:+19164164 None:intergenic
TTGATTCGAAAGAAAGAGAT+TGG 0.375124 2_4:-19167631 Msa0319450:CDS
TCTTCTTAAACAAACGCAAT+TGG 0.407848 2_4:-19166223 Msa0319450:CDS
TGAACAAGCTCAATTGGAAC+AGG 0.424624 2_4:-19167597 Msa0319450:CDS
GAACAAACTGTAGAAGTAAT+CGG 0.426123 2_4:+19163901 None:intergenic
TTCGTGCAGTACATCATAAT+AGG 0.427477 2_4:-19162620 Msa0319450:intron
GTAGTTGCAAGGAAATTGAT+AGG 0.427587 2_4:-19166251 Msa0319450:CDS
CATTAAAGAAATATAGGAAC+TGG 0.447367 2_4:+19163964 None:intergenic
TGGCAGAGGAAATCAGAATC+TGG 0.474499 2_4:+19163984 None:intergenic
ATTTGAAGGATCGCTATTGA+AGG 0.513363 2_4:+19167664 None:intergenic
TCAACGCGTATAGGATTTGA+AGG 0.514359 2_4:+19167650 None:intergenic
TTTGGGAGGTTGTAGTTGCA+AGG 0.521355 2_4:-19166262 Msa0319450:CDS
GCGCGAGAAGGCAGTAGGGT+GGG 0.530302 2_4:-19160234 Msa0319450:CDS
CTACAGTTTGTTCAAGAGAG+TGG 0.538470 2_4:-19163891 Msa0319450:intron
AGGGTGCGCGAGAAGGCAGT+AGG 0.542073 2_4:-19160239 Msa0319450:CDS
AGAACTGCCTTAATGTTGAC+AGG 0.553263 2_4:-19164171 Msa0319450:intron
AACAGGACTCTGATACTCTC+AGG 0.557080 2_4:-19167580 Msa0319450:CDS
CATAAATGCGTTGATTTGGG+AGG 0.564824 2_4:-19166276 Msa0319450:CDS
GTCAAATACATGTTCTTCGA+TGG 0.565903 2_4:-19166312 Msa0319450:CDS
TGCGCGAGAAGGCAGTAGGG+TGG 0.568426 2_4:-19160235 Msa0319450:CDS
TATATGCAAGTTTCTTCACT+CGG 0.578760 2_4:+19162649 None:intergenic
AGAAATATAGGAACTGGCAG+AGG 0.582042 2_4:+19163970 None:intergenic
GGGTGCGCGAGAAGGCAGTA+GGG 0.584887 2_4:-19160238 Msa0319450:CDS
TTAAACAAACGCAATTGGAG+CGG 0.604379 2_4:-19166218 Msa0319450:CDS
TGGAGCGGAATCAACGCTTG+TGG 0.626347 2_4:-19166203 Msa0319450:CDS
CACTCGGTAGTTCACAAAAG+CGG 0.638435 2_4:+19162665 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATAATAAATATAATAT+TGG - chr2_4:19165731-19165750 Msa0319450:intron 0.0%
!!! TTTTTTTTTTATGAATTGTT+TGG - chr2_4:19161844-19161863 Msa0319450:intron 10.0%
!!! AATATTATTTGAAATCTTTA+GGG + chr2_4:19164283-19164302 None:intergenic 10.0%
!!! TAATATTATTTGAAATCTTT+AGG + chr2_4:19164284-19164303 None:intergenic 10.0%
!! TTCCAAAAAAATAAAAATAA+AGG + chr2_4:19164436-19164455 None:intergenic 10.0%
!! TAGATTATATTTAAATGTAT+AGG - chr2_4:19164948-19164967 Msa0319450:intron 10.0%
!! AGATTATATTTAAATGTATA+GGG - chr2_4:19164949-19164968 Msa0319450:intron 10.0%
!! NNNNNNNNAATTTCCAATAA+AGG + chr2_4:19167011-19167030 None:intergenic 10.0%
!!! TTCTTTTTTGGATTTTAAAA+TGG + chr2_4:19161192-19161211 None:intergenic 15.0%
!!! CATAAAATTTTGTTCTTTTT+TGG + chr2_4:19161204-19161223 None:intergenic 15.0%
!!! TTATTTTTCAAAGAAACTTA+AGG + chr2_4:19161322-19161341 None:intergenic 15.0%
!!! TTATTTTTTGAAGAAACTTA+AGG + chr2_4:19162383-19162402 None:intergenic 15.0%
!!! GTCCTTTATTTTTATTTTTT+TGG - chr2_4:19164431-19164450 Msa0319450:intron 15.0%
!! AGTAAAAAAAATTATGTGAA+GGG - chr2_4:19164680-19164699 Msa0319450:intron 15.0%
!! AATTATATACAATCATCATA+AGG + chr2_4:19165143-19165162 None:intergenic 15.0%
!! TGTTCTTCTATTAAAAAATT+GGG + chr2_4:19166056-19166075 None:intergenic 15.0%
!! TTGTTCTTCTATTAAAAAAT+TGG + chr2_4:19165930-19165949 None:intergenic 15.0%
!! ATAAATTTCAAAAAACTGTA+GGG + chr2_4:19166130-19166149 None:intergenic 15.0%
!!! TATCTTTTATTTAGAAGAAT+AGG - chr2_4:19166147-19166166 Msa0319450:intron 15.0%
!! AAAGTTATTTGTATTGTATT+AGG - chr2_4:19166405-19166424 Msa0319450:intron 15.0%
!! AAGTTATTTGTATTGTATTA+GGG - chr2_4:19166406-19166425 Msa0319450:intron 15.0%
!! AGAAAAAATTAATCTATTCA+GGG + chr2_4:19166646-19166665 None:intergenic 15.0%
!! AAGAAAAAATTAATCTATTC+AGG + chr2_4:19166647-19166666 None:intergenic 15.0%
!!! TCAAATGTTTTTAGTTTTTT+AGG - chr2_4:19167412-19167431 Msa0319450:intron 15.0%
!!! CAAATGTTTTTAGTTTTTTA+GGG - chr2_4:19167413-19167432 Msa0319450:intron 15.0%
!!! GAAAAAAAGTATCAAATCAA+AGG + chr2_4:19160368-19160387 None:intergenic 20.0%
!!! TCATTTTCTTATATTGTTAC+CGG + chr2_4:19160421-19160440 None:intergenic 20.0%
!!! AAGTTACTTTTAAACCAAAT+TGG - chr2_4:19160820-19160839 Msa0319450:intron 20.0%
!! TTTCTAGATCAATTTATCTA+GGG + chr2_4:19161008-19161027 None:intergenic 20.0%
!!! TTTTCTAGATCAATTTATCT+AGG + chr2_4:19161009-19161028 None:intergenic 20.0%
!!! GGATTTTAAAATGGTTATAT+GGG + chr2_4:19161183-19161202 None:intergenic 20.0%
!!! TGGATTTTAAAATGGTTATA+TGG + chr2_4:19161184-19161203 None:intergenic 20.0%
!!! CTTTTCATTTCAATTCTAAA+AGG + chr2_4:19162133-19162152 None:intergenic 20.0%
!! GAATTGAAATGAAAAGAATT+AGG - chr2_4:19162137-19162156 Msa0319450:intron 20.0%
!!! TATTGGCAGAATATTTTTAT+AGG - chr2_4:19162209-19162228 Msa0319450:intron 20.0%
!!! CATTGAATAATTGATTTGTT+TGG - chr2_4:19162749-19162768 Msa0319450:intron 20.0%
!!! AGTTAGTTTTACTGTATATA+GGG - chr2_4:19163024-19163043 Msa0319450:intron 20.0%
!! TTTCTGCATTAAAGAAATAT+AGG + chr2_4:19163939-19163958 None:intergenic 20.0%
!!! TTGTTTAGTGGAATTTTTTT+TGG + chr2_4:19164183-19164202 None:intergenic 20.0%
!! TATGGAAATCCTATATTATT+TGG + chr2_4:19164247-19164266 None:intergenic 20.0%
!!! TTCCTTTTCATAAAGATTTA+TGG - chr2_4:19164341-19164360 Msa0319450:intron 20.0%
!!! ACATTATTTGATTTCAGATA+AGG + chr2_4:19164367-19164386 None:intergenic 20.0%
!!! TTATCTGAAATCAAATAATG+TGG - chr2_4:19164366-19164385 Msa0319450:intron 20.0%
!!! TATCTGAAATCAAATAATGT+GGG - chr2_4:19164367-19164386 Msa0319450:intron 20.0%
!! TTGATGCTAGTATTATATAA+TGG + chr2_4:19164550-19164569 None:intergenic 20.0%
!! AATTATTTGATTGGTATGAA+AGG - chr2_4:19164650-19164669 Msa0319450:intron 20.0%
!! ATTATTTGATTGGTATGAAA+GGG - chr2_4:19164651-19164670 Msa0319450:intron 20.0%
!! CAGTAAAAAAAATTATGTGA+AGG - chr2_4:19164679-19164698 Msa0319450:intron 20.0%
!! TATAATCTACCTTTATGTAT+TGG + chr2_4:19164937-19164956 None:intergenic 20.0%
!! TGAATTTAAATATATGCAAC+AGG - chr2_4:19165162-19165181 Msa0319450:intron 20.0%
!! GAATTTAAATATATGCAACA+GGG - chr2_4:19165163-19165182 Msa0319450:intron 20.0%
!! AATTTAAATATATGCAACAG+GGG - chr2_4:19165164-19165183 Msa0319450:intron 20.0%
!!! TACTTTAATTTCACTAATTC+TGG - chr2_4:19165312-19165331 Msa0319450:intron 20.0%
!!! ACTTTAATTTCACTAATTCT+GGG - chr2_4:19165313-19165332 Msa0319450:intron 20.0%
!! AAGAAAATAAGAAAAACCAA+AGG + chr2_4:19165339-19165358 None:intergenic 20.0%
!! TTAATGAATGAGAAAAGTAA+CGG + chr2_4:19165363-19165382 None:intergenic 20.0%
!!! ATCTCTTTTCCTTATATATT+TGG + chr2_4:19165459-19165478 None:intergenic 20.0%
!! ATATATAAGGAAAAGAGATA+TGG - chr2_4:19165460-19165479 Msa0319450:intron 20.0%
!! TGGATTAATTATGAATAAGA+CGG + chr2_4:19165625-19165644 None:intergenic 20.0%
!! CTATTAAAAAATAGCACAAA+GGG + chr2_4:19165922-19165941 None:intergenic 20.0%
!! TCTATTAAAAAATAGCACAA+AGG + chr2_4:19165923-19165942 None:intergenic 20.0%
!! TTCTTCTATTAAAAAATTGG+GGG + chr2_4:19166054-19166073 None:intergenic 20.0%
!! GTTCTTCTATTAAAAAATTG+GGG + chr2_4:19166055-19166074 None:intergenic 20.0%
!! GATAAATTTCAAAAAACTGT+AGG + chr2_4:19166131-19166150 None:intergenic 20.0%
!! AGTTATTTGTATTGTATTAG+GGG - chr2_4:19166407-19166426 Msa0319450:intron 20.0%
!!! TTGACTTGAAAACTTAAAAA+AGG - chr2_4:19166557-19166576 Msa0319450:intron 20.0%
!! TCTTATAATTAAGATAGTTC+AGG + chr2_4:19166847-19166866 None:intergenic 20.0%
!! ACTATCTTAATTATAAGACT+AGG - chr2_4:19166849-19166868 Msa0319450:intron 20.0%
!! CTATCTTAATTATAAGACTA+GGG - chr2_4:19166850-19166869 Msa0319450:intron 20.0%
!! TATCTTAATTATAAGACTAG+GGG - chr2_4:19166851-19166870 Msa0319450:intron 20.0%
!!! ACTTGTTTAAGACTATAAAT+TGG - chr2_4:19167332-19167351 Msa0319450:intron 20.0%
! TACAGAGTAAATCAAAACTA+GGG - chr2_4:19160522-19160541 Msa0319450:intron 25.0%
! TATTGAAGTGTGGTAAAAAA+AGG + chr2_4:19160867-19160886 None:intergenic 25.0%
!!! TAGTGTTTTTTATTGAAGTG+TGG + chr2_4:19160877-19160896 None:intergenic 25.0%
!!! ATCAATTTATCTAGGGTTTT+TGG + chr2_4:19161001-19161020 None:intergenic 25.0%
!!! GTTTGATTTGCTTAAATATG+AGG + chr2_4:19161229-19161248 None:intergenic 25.0%
! ACTTCGATTCTTTAATGAAA+AGG - chr2_4:19161371-19161390 Msa0319450:intron 25.0%
! ATAGAGTTTGATATCAGTAA+AGG - chr2_4:19161400-19161419 Msa0319450:intron 25.0%
!!! TTATTGCTTTTAATTGAGAC+CGG + chr2_4:19161505-19161524 None:intergenic 25.0%
! CATTGAATAACTGATGTATT+TGG - chr2_4:19161547-19161566 Msa0319450:intron 25.0%
! ATGTATTTGGTCTATATTAC+AGG - chr2_4:19161560-19161579 Msa0319450:intron 25.0%
!!! AATCATAAATGCGTTGATTT+GGG - chr2_4:19161615-19161634 Msa0319450:intron 25.0%
!! TTTGGTAATTATTGAAGTGT+AGG - chr2_4:19161862-19161881 Msa0319450:intron 25.0%
!!! AAGTGTAGGTTATTTTCTTA+TGG - chr2_4:19161876-19161895 Msa0319450:intron 25.0%
!!! TATTGATAGTGTGAAATTGT+TGG - chr2_4:19161927-19161946 Msa0319450:intron 25.0%
!!! TTGTTGCTTTTTGAAGTATT+AGG - chr2_4:19161963-19161982 Msa0319450:intron 25.0%
! AAGAATTAGGCAATGTAAAT+TGG - chr2_4:19162150-19162169 Msa0319450:intron 25.0%
!! TCTTACAATTTTGAGCATAT+TGG - chr2_4:19162192-19162211 Msa0319450:intron 25.0%
!! GGATTTTACAATGGTTATAT+AGG + chr2_4:19162245-19162264 None:intergenic 25.0%
!! ATAGAAATTTTGTTCGTCTT+TGG + chr2_4:19162266-19162285 None:intergenic 25.0%
!!! GTTTGATTTGCTTAAATATG+AGG + chr2_4:19161229-19161248 None:intergenic 25.0%
!!! CTATTTTTAGTTACTCTCTT+TGG - chr2_4:19162692-19162711 Msa0319450:CDS 25.0%
! ATTTGTTTGGTCTATATTAC+AGG - chr2_4:19162762-19162781 Msa0319450:intron 25.0%
! CTATTCAAAATTGAAAGTTC+CGG + chr2_4:19162933-19162952 None:intergenic 25.0%
!! TCAATTTTGAATAGGATAGT+AGG - chr2_4:19162939-19162958 Msa0319450:intron 25.0%
!!! CAGTTAGTTTTACTGTATAT+AGG - chr2_4:19163023-19163042 Msa0319450:intron 25.0%
! AAAATGTATACAATTCTGCA+GGG + chr2_4:19163100-19163119 None:intergenic 25.0%
! AAATATCTGTCATAATTCAC+AGG + chr2_4:19163371-19163390 None:intergenic 25.0%
! AATTAGGAAATGCTAAATCA+TGG + chr2_4:19163484-19163503 None:intergenic 25.0%
! ATAAAATGTACACTTACAAC+CGG - chr2_4:19163549-19163568 Msa0319450:intron 25.0%
! CAGAAATTCCTTAATATCTA+TGG - chr2_4:19163698-19163717 Msa0319450:intron 25.0%
! AGTTCTTTCCATAGATATTA+AGG + chr2_4:19163709-19163728 None:intergenic 25.0%
! CATTAAAGAAATATAGGAAC+TGG + chr2_4:19163933-19163952 None:intergenic 25.0%
! CAAGAACTAAAAAATCATCA+TGG + chr2_4:19163963-19163982 None:intergenic 25.0%
!!! AGTTTTTGTTGTTTGTTTAG+TGG + chr2_4:19164195-19164214 None:intergenic 25.0%
! ACAACAAAAACTAAAAGTCA+TGG - chr2_4:19164203-19164222 Msa0319450:CDS 25.0%
! TCCTATATGCCAAATAATAT+AGG - chr2_4:19164235-19164254 Msa0319450:CDS 25.0%
! TCCTATATTATTTGGCATAT+AGG + chr2_4:19164239-19164258 None:intergenic 25.0%
! TAGGGAAAAAAACAACATTA+TGG + chr2_4:19164265-19164284 None:intergenic 25.0%
! TATACGTTAATCATATTAGC+AGG - chr2_4:19164456-19164475 Msa0319450:intron 25.0%
!!! GCAACTTGTGTTATTTTTAT+TGG + chr2_4:19164597-19164616 None:intergenic 25.0%
! TTACTATTTAACTCACTAAG+AGG - chr2_4:19165094-19165113 Msa0319450:intron 25.0%
! ATCACTTGAATGATTTAGAA+TGG - chr2_4:19165418-19165437 Msa0319450:intron 25.0%
!!! TTATATATTTGGTGTAACAC+AGG + chr2_4:19165448-19165467 None:intergenic 25.0%
! TGTGTTACACCAAATATATA+AGG - chr2_4:19165447-19165466 Msa0319450:intron 25.0%
!!! CCAAATTTTAATGACTCAAA+AGG + chr2_4:19165506-19165525 None:intergenic 25.0%
!!! CCTTTTGAGTCATTAAAATT+TGG - chr2_4:19165503-19165522 Msa0319450:intron 25.0%
! AAGCTTAAGTTATTTGATCA+AGG + chr2_4:19165565-19165584 None:intergenic 25.0%
! GATCAAATAACTTAAGCTTT+CGG - chr2_4:19165566-19165585 Msa0319450:intron 25.0%
! ATCAAATAACTTAAGCTTTC+GGG - chr2_4:19165567-19165586 Msa0319450:intron 25.0%
! GGTTATTTATAGATTCTCTT+CGG + chr2_4:19165810-19165829 None:intergenic 25.0%
! AATATTATCTAATGGAGTTG+AGG + chr2_4:19165831-19165850 None:intergenic 25.0%
! GCATCTACAATATTATCTAA+TGG + chr2_4:19165839-19165858 None:intergenic 25.0%
! AGATAATATTGTAGATGCAT+TGG - chr2_4:19165841-19165860 Msa0319450:intron 25.0%
! GATAATATTGTAGATGCATT+GGG - chr2_4:19165842-19165861 Msa0319450:intron 25.0%
! AATAGAAGAACAATGCTATT+AGG - chr2_4:19165937-19165956 Msa0319450:intron 25.0%
! TCTTCTATTAAAAAATTGGG+GGG + chr2_4:19166053-19166072 None:intergenic 25.0%
! TATGAAATATTCGAATTTCG+AGG - chr2_4:19166481-19166500 Msa0319450:intron 25.0%
! AAATTAGAGAATGAGAAAGA+AGG + chr2_4:19166739-19166758 None:intergenic 25.0%
! GAAATACACATACAGTAAAA+AGG + chr2_4:19166775-19166794 None:intergenic 25.0%
! ACATTCCGTAATATAAAATC+CGG - chr2_4:19167209-19167228 Msa0319450:intron 25.0%
!! TCTTTCCGGATTTTATATTA+CGG + chr2_4:19167217-19167236 None:intergenic 25.0%
! TGAAGAAAATTGAAGAAAAG+AGG + chr2_4:19167395-19167414 None:intergenic 25.0%
!!! TTTTAGTTTTTTAGGGATGT+CGG - chr2_4:19167420-19167439 Msa0319450:intron 25.0%
!!! TGTATTTTTGGAAATTTTGC+AGG - chr2_4:19167635-19167654 Msa0319450:CDS 25.0%
!!! GTATTTTTGGAAATTTTGCA+GGG - chr2_4:19167636-19167655 Msa0319450:CDS 25.0%
! TTGATTCGAAAGAAAGAGAT+TGG - chr2_4:19160263-19160282 Msa0319450:intron 30.0%
CTACAGAGTAAATCAAAACT+AGG - chr2_4:19160521-19160540 Msa0319450:intron 30.0%
TGAAAAAACATTTAGCCTAG+TGG - chr2_4:19160582-19160601 Msa0319450:intron 30.0%
! GATGATGATGATAGATGAAA+TGG - chr2_4:19160703-19160722 Msa0319450:intron 30.0%
TGACATGATAATCATTGCAA+AGG - chr2_4:19160743-19160762 Msa0319450:intron 30.0%
GTAAAAAAAGGACTCTTCTT+CGG + chr2_4:19160855-19160874 None:intergenic 30.0%
TCCTTGCAATGCTTAAATAA+AGG - chr2_4:19161036-19161055 Msa0319450:intron 30.0%
CCTTGCAATGCTTAAATAAA+GGG - chr2_4:19161037-19161056 Msa0319450:intron 30.0%
CTTGCAATGCTTAAATAAAG+GGG - chr2_4:19161038-19161057 Msa0319450:intron 30.0%
TCAAAATAAGACTGAACGTA+TGG - chr2_4:19161071-19161090 Msa0319450:intron 30.0%
! TTTTCCTGTACCTCATTTAT+AGG - chr2_4:19161147-19161166 Msa0319450:intron 30.0%
ACAGAACATACCTATAAATG+AGG + chr2_4:19161160-19161179 None:intergenic 30.0%
TTGTCTAATCAAACTGTGAA+GGG + chr2_4:19161296-19161315 None:intergenic 30.0%
TTTGTCTAATCAAACTGTGA+AGG + chr2_4:19161297-19161316 None:intergenic 30.0%
!! GAATCATAAATGCGTTGATT+TGG - chr2_4:19161614-19161633 Msa0319450:intron 30.0%
TCTTCTTAAACAAACGCAAT+TGG - chr2_4:19161671-19161690 Msa0319450:intron 30.0%
TGCTCAAAATTGTAAGAACT+TGG + chr2_4:19162189-19162208 None:intergenic 30.0%
! TTCGTCTTTGGATTTTACAA+TGG + chr2_4:19162254-19162273 None:intergenic 30.0%
! AAGTTTAAAACTCGCTGTAA+TGG + chr2_4:19162316-19162335 None:intergenic 30.0%
TTCATCATACCTTTCATTTC+CGG - chr2_4:19162911-19162930 Msa0319450:intron 30.0%
! CGGAACTTTCAATTTTGAAT+AGG - chr2_4:19162931-19162950 Msa0319450:intron 30.0%
! GTATAGACCCTTTTCATTAT+GGG + chr2_4:19162965-19162984 None:intergenic 30.0%
! AGTATAGACCCTTTTCATTA+TGG + chr2_4:19162966-19162985 None:intergenic 30.0%
AATGAAAAGGGTCTATACTA+AGG - chr2_4:19162967-19162986 Msa0319450:intron 30.0%
GAAGGATTGGAAAAATAGTT+AGG - chr2_4:19163050-19163069 Msa0319450:intron 30.0%
TTGGAAAAATAGTTAGGAAG+AGG - chr2_4:19163056-19163075 Msa0319450:intron 30.0%
GAAAATGTATACAATTCTGC+AGG + chr2_4:19163101-19163120 None:intergenic 30.0%
ATCATTCCCCTAAAAATGTT+GGG + chr2_4:19163269-19163288 None:intergenic 30.0%
! TTTCGAGTCTTTGACTAAAA+AGG + chr2_4:19163404-19163423 None:intergenic 30.0%
!! GGTCAGTAAACTCTAAAATT+AGG + chr2_4:19163500-19163519 None:intergenic 30.0%
GCACATCTTGAAACAAATAT+AGG + chr2_4:19163521-19163540 None:intergenic 30.0%
TAAAATGTACACTTACAACC+GGG - chr2_4:19163550-19163569 Msa0319450:intron 30.0%
TTCATGGAATAATACAGAGA+TGG + chr2_4:19163762-19163781 None:intergenic 30.0%
GAACAAACTGTAGAAGTAAT+CGG + chr2_4:19163996-19164015 None:intergenic 30.0%
GTAAAAGCAATGACAAATGT+CGG + chr2_4:19164039-19164058 None:intergenic 30.0%
!! GTTTATTTTCTACTGCACTT+TGG - chr2_4:19164060-19164079 Msa0319450:intron 30.0%
AAAACTAAAAGTCATGGAGT+AGG - chr2_4:19164209-19164228 Msa0319450:CDS 30.0%
GGCCATAAATCTTTATGAAA+AGG + chr2_4:19164346-19164365 None:intergenic 30.0%
GTGTTTAGTCCAATACATAA+AGG - chr2_4:19164925-19164944 Msa0319450:intron 30.0%
AGTTAGTAAAACAGCATGAT+AGG + chr2_4:19165069-19165088 None:intergenic 30.0%
TATATGCAAGTTTCTTCACT+CGG + chr2_4:19165248-19165267 None:intergenic 30.0%
! GTCATTAAAATTTGGTGAGT+TGG - chr2_4:19165511-19165530 Msa0319450:intron 30.0%
ATAGAAGAACAATGCTATCA+TGG - chr2_4:19166065-19166084 Msa0319450:intron 30.0%
ATTTCAAAAAACTGTAGGGT+GGG + chr2_4:19166126-19166145 None:intergenic 30.0%
AATTTCAAAAAACTGTAGGG+TGG + chr2_4:19166127-19166146 None:intergenic 30.0%
TTAGAAGAATAGGAGTAACA+AGG - chr2_4:19166157-19166176 Msa0319450:intron 30.0%
! ACCCAACAACTTAAGATTTT+GGG + chr2_4:19166239-19166258 None:intergenic 30.0%
! TACCCAACAACTTAAGATTT+TGG + chr2_4:19166240-19166259 None:intergenic 30.0%
AGAAAAGAAAACAAAACCGT+TGG - chr2_4:19166304-19166323 Msa0319450:CDS 30.0%
GAAAAGAAAACAAAACCGTT+GGG - chr2_4:19166305-19166324 Msa0319450:CDS 30.0%
! TATAATGTGAGAGTTGCTTT+AGG - chr2_4:19166367-19166386 Msa0319450:intron 30.0%
TTCGAATTTCGAGGTTATTA+TGG - chr2_4:19166490-19166509 Msa0319450:intron 30.0%
CACAATAATCACTGGAAATT+AGG - chr2_4:19166531-19166550 Msa0319450:intron 30.0%
AAGTGAAAGTTCCAAGAATT+AGG - chr2_4:19166619-19166638 Msa0319450:intron 30.0%
! AATAAGAAAGCTTTAGCTAC+CGG + chr2_4:19166697-19166716 None:intergenic 30.0%
! TTAATCCGGAAAGTATATTC+CGG + chr2_4:19167139-19167158 None:intergenic 30.0%
AATCCAATTCTGAATCTTTC+CGG + chr2_4:19167231-19167250 None:intergenic 30.0%
ATTGACTGTATTAATGACCT+AGG - chr2_4:19167309-19167328 Msa0319450:intron 30.0%
! TATAGTCTTAAACAAGTCCT+AGG + chr2_4:19167329-19167348 None:intergenic 30.0%
ACCATATTGTTAGTGATTTC+CGG + chr2_4:19167591-19167610 None:intergenic 30.0%
AAATCACTAACAATATGGTC+CGG - chr2_4:19167592-19167611 Msa0319450:CDS 30.0%
CTAGTCTGGATTATATAATC+CGG + chr2_4:19167614-19167633 None:intergenic 30.0%
ATTTGAAGGATCGCTATTGA+AGG + chr2_4:19160233-19160252 None:intergenic 35.0%
TCTTCTTGAACAAGCTCAAT+TGG - chr2_4:19160291-19160310 Msa0319450:intron 35.0%
GATGATGATAGAATTGACAC+CGG - chr2_4:19160399-19160418 Msa0319450:intron 35.0%
CATTGCAAAGGAACTACATA+AGG - chr2_4:19160755-19160774 Msa0319450:intron 35.0%
!!! TAGGGTTTTTGGTGAAACAT+GGG + chr2_4:19160990-19161009 None:intergenic 35.0%
! CCCTTTATTTAAGCATTGCA+AGG + chr2_4:19161040-19161059 None:intergenic 35.0%
AACGTATGGCGCATTTAATA+TGG - chr2_4:19161085-19161104 Msa0319450:intron 35.0%
CATACCTATAAATGAGGTAC+AGG + chr2_4:19161154-19161173 None:intergenic 35.0%
GTAAAACTCACTGTAAGGTT+CGG + chr2_4:19161251-19161270 None:intergenic 35.0%
GAAGTGTAAAACTCACTGTA+AGG + chr2_4:19161256-19161275 None:intergenic 35.0%
AAGGGTTTGACAAACTCATT+TGG + chr2_4:19161278-19161297 None:intergenic 35.0%
GTCAAATACATGTTCTTCGA+TGG - chr2_4:19161582-19161601 Msa0319450:intron 35.0%
GTAGTTGCAAGGAAATTGAT+AGG - chr2_4:19161643-19161662 Msa0319450:intron 35.0%
TTAAACAAACGCAATTGGAG+CGG - chr2_4:19161676-19161695 Msa0319450:intron 35.0%
! GGAAATGAAAGGTATGATGA+AGG + chr2_4:19162912-19162931 None:intergenic 35.0%
TTGAAAGTTCCGGAAATGAA+AGG + chr2_4:19162923-19162942 None:intergenic 35.0%
ATAGTAGGCCCATAATGAAA+AGG - chr2_4:19162954-19162973 Msa0319450:intron 35.0%
TAGTAGGCCCATAATGAAAA+GGG - chr2_4:19162955-19162974 Msa0319450:intron 35.0%
GTCTATACTAAGGAGAATAG+TGG - chr2_4:19162977-19162996 Msa0319450:intron 35.0%
TTACTGTATATAGGGAGAGA+AGG - chr2_4:19163032-19163051 Msa0319450:intron 35.0%
TTTCCTCTTATCCAAAGACT+CGG + chr2_4:19163130-19163149 None:intergenic 35.0%
TCATTCCCCTAAAAATGTTG+GGG + chr2_4:19163268-19163287 None:intergenic 35.0%
CATCATTCCCCTAAAAATGT+TGG + chr2_4:19163270-19163289 None:intergenic 35.0%
GTGAGATTGTATCACAATGA+TGG - chr2_4:19163289-19163308 Msa0319450:intron 35.0%
AGATTGTATCACAATGATGG+TGG - chr2_4:19163292-19163311 Msa0319450:intron 35.0%
AAAATGTACACTTACAACCG+GGG - chr2_4:19163551-19163570 Msa0319450:intron 35.0%
AGCGAAAAAAGTTGTCAGAA+CGG - chr2_4:19163658-19163677 Msa0319450:intron 35.0%
AACATCACCTGTCAACATTA+AGG + chr2_4:19163733-19163752 None:intergenic 35.0%
!! TACCATTTTTGTGTGCATTC+AGG - chr2_4:19163875-19163894 Msa0319450:intron 35.0%
TTCCTGAATGCACACAAAAA+TGG + chr2_4:19163880-19163899 None:intergenic 35.0%
! TGAAGCAAGATTTTGCGAAT+TGG - chr2_4:19164091-19164110 Msa0319450:intron 35.0%
TGGGTATATTTGAGAACCAT+AGG - chr2_4:19164386-19164405 Msa0319450:intron 35.0%
GGGTATATTTGAGAACCATA+GGG - chr2_4:19164387-19164406 Msa0319450:intron 35.0%
GGTATATTTGAGAACCATAG+GGG - chr2_4:19164388-19164407 Msa0319450:intron 35.0%
ATAGGGGATAGTACAGTTAA+GGG - chr2_4:19164404-19164423 Msa0319450:intron 35.0%
ATTGGTAAAAGCGAAAAGAC+AGG + chr2_4:19164579-19164598 None:intergenic 35.0%
AATAGATGCTATCAACAGTC+TGG + chr2_4:19164816-19164835 None:intergenic 35.0%
! AGACTGTTGAGTCTCATTTT+AGG - chr2_4:19164852-19164871 Msa0319450:intron 35.0%
TAAAACAGCATGATAGGCAT+GGG + chr2_4:19165063-19165082 None:intergenic 35.0%
TTCGTGCAGTACATCATAAT+AGG - chr2_4:19165274-19165293 Msa0319450:intron 35.0%
TACACTGCATATCAGAGATT+AGG - chr2_4:19165761-19165780 Msa0319450:intron 35.0%
GAACAATGCTATTAGGAACT+AGG - chr2_4:19165944-19165963 Msa0319450:intron 35.0%
!! ATTAGGAACTAGGAGTATCA+TGG - chr2_4:19165954-19165973 Msa0319450:intron 35.0%
ATTAAAAAATTGGGGGGAGT+TGG + chr2_4:19166047-19166066 None:intergenic 35.0%
TGATAGCTTCTCAAACATTG+TGG + chr2_4:19166196-19166215 None:intergenic 35.0%
! ACCCCAAAATCTTAAGTTGT+TGG - chr2_4:19166234-19166253 Msa0319450:CDS 35.0%
! CCCAACAACTTAAGATTTTG+GGG + chr2_4:19166238-19166257 None:intergenic 35.0%
! CCCCAAAATCTTAAGTTGTT+GGG - chr2_4:19166235-19166254 Msa0319450:CDS 35.0%
! TTGTATTAGGGGTATGAATC+TGG - chr2_4:19166418-19166437 Msa0319450:intron 35.0%
TTTCGAGGTTATTATGGACA+TGG - chr2_4:19166496-19166515 Msa0319450:intron 35.0%
GGTTATTATGGACATGGAAA+TGG - chr2_4:19166502-19166521 Msa0319450:intron 35.0%
!! GGTTTTGTCACAATAATCAC+TGG - chr2_4:19166523-19166542 Msa0319450:intron 35.0%
! ATAAGAAAGCTTTAGCTACC+GGG + chr2_4:19166696-19166715 None:intergenic 35.0%
GTTCAGGCATGCTTAAATAA+TGG + chr2_4:19166831-19166850 None:intergenic 35.0%
! TAAGACTAGGGGTCTATTTT+CGG - chr2_4:19166862-19166881 Msa0319450:intron 35.0%
!!! TTCGGTTTGGCTACTTTTTT+TGG - chr2_4:19166880-19166899 Msa0319450:intron 35.0%
!!! TCGGTTTGGCTACTTTTTTT+GGG - chr2_4:19166881-19166900 Msa0319450:intron 35.0%
! TTGATCCTTCAACTGATTTC+TGG + chr2_4:19166946-19166965 None:intergenic 35.0%
!!! ACAACTTTTATTGACTCCGA+AGG - chr2_4:19166965-19166984 Msa0319450:intron 35.0%
TGCATCAGCATTTCCTTTAT+TGG - chr2_4:19166995-19167014 Msa0319450:intron 35.0%
! NNNNNNGCACCTTTGGTTTC+CGG - chr2_4:19167117-19167136 Msa0319450:intron 35.0%
AAGTATATTCCGGAAACCAA+AGG + chr2_4:19167129-19167148 None:intergenic 35.0%
TTTCCGGATTAATGCGATAA+TGG - chr2_4:19167147-19167166 Msa0319450:intron 35.0%
TCACCATTATCGCATTAATC+CGG + chr2_4:19167153-19167172 None:intergenic 35.0%
AATCCGGAAAGATTCAGAAT+TGG - chr2_4:19167225-19167244 Msa0319450:intron 35.0%
AGTCAATGAAAACGTGTTAG+TGG + chr2_4:19167296-19167315 None:intergenic 35.0%
!! ATGGAGGTATTTGTTGAAGA+TGG + chr2_4:19167361-19167380 None:intergenic 35.0%
AAAAGAGGTGAAGTGAAGAA+TGG + chr2_4:19167380-19167399 None:intergenic 35.0%
TATTGCAGGGTTCATATGAA+CGG + chr2_4:19167467-19167486 None:intergenic 35.0%
AATAGCATTTCAGCTTGTGT+GGG - chr2_4:19167483-19167502 Msa0319450:intron 35.0%
GTGTCTTTCTTTGATGTCAA+GGG + chr2_4:19167532-19167551 None:intergenic 35.0%
TGTGTCTTTCTTTGATGTCA+AGG + chr2_4:19167533-19167552 None:intergenic 35.0%
!!! CTGGTTCGGATTTAATTTTC+CGG - chr2_4:19167569-19167588 Msa0319450:intron 35.0%
TCCGGAAATCACTAACAATA+TGG - chr2_4:19167587-19167606 Msa0319450:CDS 35.0%
CGGATTATATAATCCAGACT+AGG - chr2_4:19167612-19167631 Msa0319450:CDS 35.0%
! ATCCAGACTAGGTGTATTTT+TGG - chr2_4:19167623-19167642 Msa0319450:CDS 35.0%
TTCCAAAAATACACCTAGTC+TGG + chr2_4:19167628-19167647 None:intergenic 35.0%
TCAACGCGTATAGGATTTGA+AGG + chr2_4:19160247-19160266 None:intergenic 40.0%
TCTTTCGAATCAACGCGTAT+AGG + chr2_4:19160256-19160275 None:intergenic 40.0%
TGAACAAGCTCAATTGGAAC+AGG - chr2_4:19160297-19160316 Msa0319450:intron 40.0%
! CTTCTAATCAAAGGTGTGTC+CGG + chr2_4:19160493-19160512 None:intergenic 40.0%
! GCACTGACACTTCTAATCAA+AGG + chr2_4:19160502-19160521 None:intergenic 40.0%
TAGCCTAGTGGTAGATGATA+TGG - chr2_4:19160594-19160613 Msa0319450:intron 40.0%
ATGGGTGTGTCTCTTCAATT+CGG + chr2_4:19160972-19160991 None:intergenic 40.0%
!!! CTAGGGTTTTTGGTGAAACA+TGG + chr2_4:19160991-19161010 None:intergenic 40.0%
!! TGCTTTTAATTGAGACCGGA+GGG + chr2_4:19161501-19161520 None:intergenic 40.0%
!! TTGCTTTTAATTGAGACCGG+AGG + chr2_4:19161502-19161521 None:intergenic 40.0%
!! CATAAATGCGTTGATTTGGG+AGG - chr2_4:19161618-19161637 Msa0319450:intron 40.0%
AAATTGTTGGTGTGTGAAGC+TGG - chr2_4:19161940-19161959 Msa0319450:intron 40.0%
ACGTGTACGATACTAGCATT+AGG + chr2_4:19162068-19162087 None:intergenic 40.0%
ACACGTCTTACACTAGCATT+AGG - chr2_4:19162082-19162101 Msa0319450:intron 40.0%
GAGGGTTTGACAAACTCATT+TGG + chr2_4:19162339-19162358 None:intergenic 40.0%
TTGTCTAATCAAACCGTGGA+GGG + chr2_4:19162357-19162376 None:intergenic 40.0%
TTTGTCTAATCAAACCGTGG+AGG + chr2_4:19162358-19162377 None:intergenic 40.0%
GTCTTTGTCTAATCAAACCG+TGG + chr2_4:19162361-19162380 None:intergenic 40.0%
TTGTCGTCTTAAACCCACTT+CGG - chr2_4:19162413-19162432 Msa0319450:intron 40.0%
TCAAACATGAGACCTTGAGA+AGG + chr2_4:19162482-19162501 None:intergenic 40.0%
GTCTCATGTTTGATTCTCCT+TGG - chr2_4:19162489-19162508 Msa0319450:intron 40.0%
TCAACATCCATGTGCAAAGT+AGG - chr2_4:19162824-19162843 Msa0319450:intron 40.0%
ATACGATCCTACTTTGCACA+TGG + chr2_4:19162834-19162853 None:intergenic 40.0%
ATTATACTAGCGACCTCCTA+AGG - chr2_4:19162877-19162896 Msa0319450:intron 40.0%
! ATGAAAGGTATGATGAAGGC+AGG + chr2_4:19162908-19162927 None:intergenic 40.0%
! ACTAAGGAGAATAGTGGAGT+CGG - chr2_4:19162983-19163002 Msa0319450:intron 40.0%
GTATATAGGGAGAGAAGGAT+TGG - chr2_4:19163037-19163056 Msa0319450:intron 40.0%
ATCACAGTGACATTTCTCTC+TGG - chr2_4:19163166-19163185 Msa0319450:intron 40.0%
TAAGAGGTTAGGGAGAAGAA+GGG + chr2_4:19163220-19163239 None:intergenic 40.0%
TAAAAATGTTGGGGGTGACA+GGG + chr2_4:19163259-19163278 None:intergenic 40.0%
! TGTCACCCCCAACATTTTTA+GGG - chr2_4:19163259-19163278 Msa0319450:intron 40.0%
CATTCCCCTAAAAATGTTGG+GGG + chr2_4:19163267-19163286 None:intergenic 40.0%
GGAGATGCATTTCTGATGAA+TGG - chr2_4:19163572-19163591 Msa0319450:intron 40.0%
AGAACTGCCTTAATGTTGAC+AGG - chr2_4:19163723-19163742 Msa0319450:intron 40.0%
GTAAGCAGCTTTCTGTTTCA+TGG + chr2_4:19163778-19163797 None:intergenic 40.0%
! TGTGCATTCAGGAAAGCTTT+TGG - chr2_4:19163886-19163905 Msa0319450:intron 40.0%
AGAAATATAGGAACTGGCAG+AGG + chr2_4:19163927-19163946 None:intergenic 40.0%
! CTACAGTTTGTTCAAGAGAG+TGG - chr2_4:19164003-19164022 Msa0319450:intron 40.0%
!!! GTGGAATTTTTTTTGGCGAG+TGG + chr2_4:19164176-19164195 None:intergenic 40.0%
CTTAACTGTACTATCCCCTA+TGG + chr2_4:19164405-19164424 None:intergenic 40.0%
CATAGGGGATAGTACAGTTA+AGG - chr2_4:19164403-19164422 Msa0319450:intron 40.0%
GGATAGTACAGTTAAGGGAT+TGG - chr2_4:19164409-19164428 Msa0319450:intron 40.0%
TTAAACCATGCAACCTTGTG+TGG + chr2_4:19164516-19164535 None:intergenic 40.0%
! CTGTTGAGTCTCATTTTAGG+TGG - chr2_4:19164855-19164874 Msa0319450:intron 40.0%
AAAACAGCATGATAGGCATG+GGG + chr2_4:19165062-19165081 None:intergenic 40.0%
GTAAAACAGCATGATAGGCA+TGG + chr2_4:19165064-19165083 None:intergenic 40.0%
! GATGCTGTGAAACTTTTTGC+TGG - chr2_4:19165186-19165205 Msa0319450:intron 40.0%
TTTCACTAATTCTGGGCCTT+TGG - chr2_4:19165320-19165339 Msa0319450:intron 40.0%
GTGCACTTGTGTTTCAAACT+TGG + chr2_4:19165645-19165664 None:intergenic 40.0%
ACAAGTGCACAAGTTTGAGT+TGG - chr2_4:19165655-19165674 Msa0319450:intron 40.0%
ATTCTCTTCGGTGATATGCT+CGG + chr2_4:19165798-19165817 None:intergenic 40.0%
GAATGCTTGCTTCTTCAAAG+GGG + chr2_4:19165868-19165887 None:intergenic 40.0%
GGAATGCTTGCTTCTTCAAA+GGG + chr2_4:19165869-19165888 None:intergenic 40.0%
TGGAATGCTTGCTTCTTCAA+AGG + chr2_4:19165870-19165889 None:intergenic 40.0%
CAACAACTTGGACAATTGGA+GGG + chr2_4:19165987-19166006 None:intergenic 40.0%
TCAACAACTTGGACAATTGG+AGG + chr2_4:19165988-19166007 None:intergenic 40.0%
TATGCTTTCGCTCAACAACT+TGG + chr2_4:19165999-19166018 None:intergenic 40.0%
! TGTTGAGCGAAAGCATATCA+TGG - chr2_4:19166002-19166021 Msa0319450:intron 40.0%
CTATTCAGGGTCCTAATTCT+TGG + chr2_4:19166633-19166652 None:intergenic 40.0%
ATCATTACAACACTGCTTCC+CGG - chr2_4:19166675-19166694 Msa0319450:intron 40.0%
!!! CGGTTTGGCTACTTTTTTTG+GGG - chr2_4:19166882-19166901 Msa0319450:intron 40.0%
ACTCACCAGAAATCAGTTGA+AGG - chr2_4:19166938-19166957 Msa0319450:intron 40.0%
GGTTTCCGGAATATACTTTC+CGG - chr2_4:19167131-19167150 Msa0319450:intron 40.0%
! TAATGCGATAATGGTGAACG+AGG - chr2_4:19167156-19167175 Msa0319450:intron 40.0%
! AATGCGATAATGGTGAACGA+GGG - chr2_4:19167157-19167176 Msa0319450:intron 40.0%
AAAAGTTGGCACTTCCTGTA+GGG - chr2_4:19167180-19167199 Msa0319450:intron 40.0%
TTGAAAGAGAGCCATTAACG+TGG - chr2_4:19167254-19167273 Msa0319450:intron 40.0%
TGAAAGAGAGCCATTAACGT+GGG - chr2_4:19167255-19167274 Msa0319450:intron 40.0%
!!! TAGTTTTTTAGGGATGTCGG+TGG - chr2_4:19167423-19167442 Msa0319450:intron 40.0%
CAAGCTGAAATGCTATTGCA+GGG + chr2_4:19167480-19167499 None:intergenic 40.0%
ACAAGCTGAAATGCTATTGC+AGG + chr2_4:19167481-19167500 None:intergenic 40.0%
CAATAGCATTTCAGCTTGTG+TGG - chr2_4:19167482-19167501 Msa0319450:intron 40.0%
ATAGCATTTCAGCTTGTGTG+GGG - chr2_4:19167484-19167503 Msa0319450:intron 40.0%
CTTGTGTGGGGTTCATATAA+TGG - chr2_4:19167496-19167515 Msa0319450:intron 40.0%
! ACAAAAAAGCGCACAACATC+TGG - chr2_4:19167550-19167569 Msa0319450:intron 40.0%
AACAGGACTCTGATACTCTC+AGG - chr2_4:19160314-19160333 Msa0319450:intron 45.0%
CTCTGATACTCTCAGGATTC+AGG - chr2_4:19160321-19160340 Msa0319450:intron 45.0%
ACGCCATATCATCTACCACT+AGG + chr2_4:19160600-19160619 None:intergenic 45.0%
! AAGCCTTATCCCGCTAAATG+GGG + chr2_4:19160643-19160662 None:intergenic 45.0%
! CAAGCCTTATCCCGCTAAAT+GGG + chr2_4:19160644-19160663 None:intergenic 45.0%
AAGGACTCTTCTTCGGAGTT+CGG + chr2_4:19160848-19160867 None:intergenic 45.0%
CTATTGTCAGTTACTCCCTC+CGG - chr2_4:19161483-19161502 Msa0319450:intron 45.0%
TTTGGGAGGTTGTAGTTGCA+AGG - chr2_4:19161632-19161651 Msa0319450:intron 45.0%
ACTAACACGTGTCTTACACC+AGG - chr2_4:19162037-19162056 Msa0319450:intron 45.0%
TACTAGCATTAGGCAATGCC+TGG + chr2_4:19162058-19162077 None:intergenic 45.0%
TGAGTTTGTCAAACCCTCCA+CGG - chr2_4:19162341-19162360 Msa0319450:intron 45.0%
TGTCGTCTTAAACCCACTTC+GGG - chr2_4:19162414-19162433 Msa0319450:intron 45.0%
TTGAGAAGGAGCAAACTCCA+AGG + chr2_4:19162468-19162487 None:intergenic 45.0%
! TTGGAGTTTGCTCCTTCTCA+AGG - chr2_4:19162467-19162486 Msa0319450:intron 45.0%
!! TGATTCTCCTTGGTGCCAAT+TGG - chr2_4:19162499-19162518 Msa0319450:intron 45.0%
!! GATTCTCCTTGGTGCCAATT+GGG - chr2_4:19162500-19162519 Msa0319450:intron 45.0%
GCTAAATTAGCCCACCCAAT+TGG + chr2_4:19162517-19162536 None:intergenic 45.0%
! AATTCTGCAGGGCATTCAAG+AGG + chr2_4:19163089-19163108 None:intergenic 45.0%
GATATCCTGGTAGAACCAAC+TGG + chr2_4:19163198-19163217 None:intergenic 45.0%
GTAAGAGGTTAGGGAGAAGA+AGG + chr2_4:19163221-19163240 None:intergenic 45.0%
AGATGGTCGGTAAGAGGTTA+GGG + chr2_4:19163230-19163249 None:intergenic 45.0%
CTAAAAATGTTGGGGGTGAC+AGG + chr2_4:19163260-19163279 None:intergenic 45.0%
! CTGTCACCCCCAACATTTTT+AGG - chr2_4:19163258-19163277 Msa0319450:intron 45.0%
!! GTCACCCCCAACATTTTTAG+GGG - chr2_4:19163260-19163279 Msa0319450:intron 45.0%
TCATCAGAAATGCATCTCCC+CGG + chr2_4:19163571-19163590 None:intergenic 45.0%
TGGCAGAGGAAATCAGAATC+TGG + chr2_4:19163913-19163932 None:intergenic 45.0%
AGTTCACACCATTCCACACA+AGG - chr2_4:19164500-19164519 Msa0319450:intron 45.0%
AACTCCATTAGAGAGAGCGA+GGG - chr2_4:19164878-19164897 Msa0319450:intron 45.0%
CACTGAGGTTGGCAACAATA+TGG + chr2_4:19165022-19165041 None:intergenic 45.0%
CATATTGTTGCCAACCTCAG+TGG - chr2_4:19165020-19165039 Msa0319450:intron 45.0%
TTGCCAACCTCAGTGGAAAA+AGG - chr2_4:19165027-19165046 Msa0319450:intron 45.0%
! AAGCCTTTTTCCACTGAGGT+TGG + chr2_4:19165033-19165052 None:intergenic 45.0%
ACCTCAGTGGAAAAAGGCTT+TGG - chr2_4:19165033-19165052 Msa0319450:intron 45.0%
! ACCAAAGCCTTTTTCCACTG+AGG + chr2_4:19165037-19165056 None:intergenic 45.0%
AAACAGCATGATAGGCATGG+GGG + chr2_4:19165061-19165080 None:intergenic 45.0%
CACTCGGTAGTTCACAAAAG+CGG + chr2_4:19165232-19165251 None:intergenic 45.0%
ACTTAAGCTTTCGGGAGAGT+TGG - chr2_4:19165575-19165594 Msa0319450:intron 45.0%
CCCTCTCACACAAACACTTT+GGG + chr2_4:19165707-19165726 None:intergenic 45.0%
! CCCAAAGTGTTTGTGTGAGA+GGG - chr2_4:19165704-19165723 Msa0319450:intron 45.0%
ACCCTCTCACACAAACACTT+TGG + chr2_4:19165708-19165727 None:intergenic 45.0%
TTCTCTTCGGTGATATGCTC+GGG + chr2_4:19165797-19165816 None:intergenic 45.0%
CAGTGGCACTATGCAGTATA+TGG + chr2_4:19165890-19165909 None:intergenic 45.0%
CATATACTGCATAGTGCCAC+TGG - chr2_4:19165888-19165907 Msa0319450:intron 45.0%
ACAAAGGGACTTAGATCCAG+TGG + chr2_4:19165907-19165926 None:intergenic 45.0%
CGCTCAACAACTTGGACAAT+TGG + chr2_4:19165991-19166010 None:intergenic 45.0%
CTATCATGGACCAAATCCCT+GGG - chr2_4:19166079-19166098 Msa0319450:intron 45.0%
TATCATGGACCAAATCCCTG+GGG - chr2_4:19166080-19166099 Msa0319450:intron 45.0%
! CTAGGGGTCTATTTTCGGTT+TGG - chr2_4:19166867-19166886 Msa0319450:intron 45.0%
GCTGATGCATTAGACTCCTT+CGG + chr2_4:19166984-19167003 None:intergenic 45.0%
ATGGTGAACGAGGGAAAAGT+TGG - chr2_4:19167166-19167185 Msa0319450:intron 45.0%
GAAAAGTTGGCACTTCCTGT+AGG - chr2_4:19167179-19167198 Msa0319450:intron 45.0%
AGAGGTGAAGTGAAGAATGG+AGG + chr2_4:19167377-19167396 None:intergenic 45.0%
AAAGCGCACAACATCTGGTT+CGG - chr2_4:19167555-19167574 Msa0319450:intron 45.0%
!! AAAAAATTAAATTATTTGAT+TGG - chr2_4:19164641-19164660 Msa0319450:intron 5.0%
!!! AATATAATTTATTTTCTTAA+TGG + chr2_4:19164978-19164997 None:intergenic 5.0%
!! AAAATAAATTATATTTAAAC+TGG - chr2_4:19164983-19165002 Msa0319450:intron 5.0%
GTCAGTGTCAGACACGAACA+CGG + chr2_4:19160458-19160477 None:intergenic 50.0%
CACTGACACCTGATGAACAC+CGG - chr2_4:19160471-19160490 Msa0319450:intron 50.0%
ATGTAGCCGACCCCATTTAG+CGG - chr2_4:19160630-19160649 Msa0319450:intron 50.0%
CTTATCCCGCTAAATGGGGT+CGG + chr2_4:19160639-19160658 None:intergenic 50.0%
! CCAAGCCTTATCCCGCTAAA+TGG + chr2_4:19160645-19160664 None:intergenic 50.0%
CCATTTAGCGGGATAAGGCT+TGG - chr2_4:19160642-19160661 Msa0319450:intron 50.0%
TTCGGAGTTCGGAGCCAATT+TGG + chr2_4:19160837-19160856 None:intergenic 50.0%
CTCTGCTGCACTTCAGATTC+AGG - chr2_4:19161728-19161747 Msa0319450:intron 50.0%
AACACGACACTGGCAATGGT+AGG + chr2_4:19162001-19162020 None:intergenic 50.0%
TACCATTGCCAGTGTCGTGT+TGG - chr2_4:19162000-19162019 Msa0319450:intron 50.0%
AGCATTAGGCAATGACTGCG+TGG - chr2_4:19162096-19162115 Msa0319450:intron 50.0%
GCATTAGGCAATGACTGCGT+GGG - chr2_4:19162097-19162116 Msa0319450:intron 50.0%
CATTAGGCAATGACTGCGTG+GGG - chr2_4:19162098-19162117 Msa0319450:intron 50.0%
GTCTTAAACCCACTTCGGGT+TGG - chr2_4:19162418-19162437 Msa0319450:intron 50.0%
!! TCTGGTGGTGTTGTTGGCTT+GGG - chr2_4:19162441-19162460 Msa0319450:intron 50.0%
ATGAAGGCAGGACTCTCCTT+AGG + chr2_4:19162896-19162915 None:intergenic 50.0%
! TTTTCCTCCTGCCGAGTCTT+TGG - chr2_4:19163116-19163135 Msa0319450:intron 50.0%
TTATCCAAAGACTCGGCAGG+AGG + chr2_4:19163123-19163142 None:intergenic 50.0%
CTCTTATCCAAAGACTCGGC+AGG + chr2_4:19163126-19163145 None:intergenic 50.0%
CTGCCGAGTCTTTGGATAAG+AGG - chr2_4:19163124-19163143 Msa0319450:intron 50.0%
TCTCTCTGGTCTCTACCAGT+TGG - chr2_4:19163180-19163199 Msa0319450:intron 50.0%
!! CTCTACCAGTTGGTTCTACC+AGG - chr2_4:19163190-19163209 Msa0319450:intron 50.0%
AGGGAGAAGAAGGGATATCC+TGG + chr2_4:19163211-19163230 None:intergenic 50.0%
GAGATGGTCGGTAAGAGGTT+AGG + chr2_4:19163231-19163250 None:intergenic 50.0%
TTGGTGAGATGGTCGGTAAG+AGG + chr2_4:19163236-19163255 None:intergenic 50.0%
CCATGCAACCTTGTGTGGAA+TGG + chr2_4:19164511-19164530 None:intergenic 50.0%
CCATTCCACACAAGGTTGCA+TGG - chr2_4:19164508-19164527 Msa0319450:intron 50.0%
GAACTCCATTAGAGAGAGCG+AGG - chr2_4:19164877-19164896 Msa0319450:intron 50.0%
ACTCCATTAGAGAGAGCGAG+GGG - chr2_4:19164879-19164898 Msa0319450:intron 50.0%
TTTGGGCTTGTGAAGCATGG+AGG + chr2_4:19165690-19165709 None:intergenic 50.0%
CACTTTGGGCTTGTGAAGCA+TGG + chr2_4:19165693-19165712 None:intergenic 50.0%
! GCCCAAAGTGTTTGTGTGAG+AGG - chr2_4:19165703-19165722 Msa0319450:intron 50.0%
CTTGGACAATTGGAGGGAGT+TGG + chr2_4:19165981-19166000 None:intergenic 50.0%
GTTGGTCAATTGGGGGGAAT+TGG + chr2_4:19166029-19166048 None:intergenic 50.0%
! TTGGGGGGAGTTGGTCAATT+GGG + chr2_4:19166038-19166057 None:intergenic 50.0%
! ATTGGGGGGAGTTGGTCAAT+TGG + chr2_4:19166039-19166058 None:intergenic 50.0%
GCTATCATGGACCAAATCCC+TGG - chr2_4:19166078-19166097 Msa0319450:intron 50.0%
! AAGCACTTGCTGCAACCCAA+CGG + chr2_4:19166323-19166342 None:intergenic 50.0%
GAGAGCCATTAACGTGGGTT+TGG - chr2_4:19167260-19167279 Msa0319450:intron 50.0%
GCCATTAACGTGGGTTTGGA+CGG - chr2_4:19167264-19167283 Msa0319450:intron 50.0%
ACCGTCCAAACCCACGTTAA+TGG + chr2_4:19167268-19167287 None:intergenic 50.0%
AGGTGTGTCCGGTGTTCATC+AGG + chr2_4:19160482-19160501 None:intergenic 55.0%
GCTAAATGGGGTCGGCTACA+TGG + chr2_4:19160631-19160650 None:intergenic 55.0%
TGTAGCCGACCCCATTTAGC+GGG - chr2_4:19160631-19160650 Msa0319450:intron 55.0%
CGACCCCATTTAGCGGGATA+AGG - chr2_4:19160637-19160656 Msa0319450:intron 55.0%
TGGAGCGGAATCAACGCTTG+TGG - chr2_4:19161691-19161710 Msa0319450:intron 55.0%
CACCAACACGACACTGGCAA+TGG + chr2_4:19162005-19162024 None:intergenic 55.0%
GTTCGACACCAACACGACAC+TGG + chr2_4:19162011-19162030 None:intergenic 55.0%
!! AAACCCACTTCGGGTTGGTC+TGG - chr2_4:19162423-19162442 Msa0319450:intron 55.0%
!! GGTTGGTCTGGTGGTGTTGT+TGG - chr2_4:19162435-19162454 Msa0319450:intron 55.0%
!! GTCTGGTGGTGTTGTTGGCT+TGG - chr2_4:19162440-19162459 Msa0319450:intron 55.0%
!! GTGTTGTTGGCTTGGGACCT+TGG - chr2_4:19162448-19162467 Msa0319450:intron 55.0%
!! TCTCCTTGGTGCCAATTGGG+TGG - chr2_4:19162503-19162522 Msa0319450:intron 55.0%
!! CTCCTTGGTGCCAATTGGGT+GGG - chr2_4:19162504-19162523 Msa0319450:intron 55.0%
AAGGCAGGACTCTCCTTAGG+AGG + chr2_4:19162893-19162912 None:intergenic 55.0%
!! GACAGGGTTGGTGAGATGGT+CGG + chr2_4:19163243-19163262 None:intergenic 55.0%
AATGTTGGGGGTGACAGGGT+TGG + chr2_4:19163255-19163274 None:intergenic 55.0%
CTCCATTAGAGAGAGCGAGG+GGG - chr2_4:19164880-19164899 Msa0319450:intron 55.0%
TCCATTAGAGAGAGCGAGGG+GGG - chr2_4:19164881-19164900 Msa0319450:intron 55.0%
! TGGGGGGAGTTGGTCAATTG+GGG + chr2_4:19166037-19166056 None:intergenic 55.0%
TGCTTCAAGCCCCAGGGATT+TGG + chr2_4:19166092-19166111 None:intergenic 55.0%
AATCCCTGGGGCTTGAAGCA+CGG - chr2_4:19166092-19166111 Msa0319450:intron 55.0%
! GCAGCAAGTGCTTGCTACAC+AGG - chr2_4:19166330-19166349 Msa0319450:intron 55.0%
! GTGCTTGCTACACAGGTGCA+TGG - chr2_4:19166337-19166356 Msa0319450:intron 55.0%
TGGCACTTCCTGTAGGGCTA+AGG - chr2_4:19167186-19167205 Msa0319450:intron 55.0%
CGGAATGTCCTTAGCCCTAC+AGG + chr2_4:19167197-19167216 None:intergenic 55.0%
! TAGGGATGTCGGTGGTGTCA+TGG - chr2_4:19167431-19167450 Msa0319450:intron 55.0%
! ATTTTGCAGGGTGCGCGAGA+AGG - chr2_4:19167648-19167667 Msa0319450:CDS 55.0%
GGCAATGACTGCGTGGGGAT+AGG - chr2_4:19162103-19162122 Msa0319450:intron 60.0%
CCACCAGACCAACCCGAAGT+GGG + chr2_4:19162429-19162448 None:intergenic 60.0%
ACCACCAGACCAACCCGAAG+TGG + chr2_4:19162430-19162449 None:intergenic 60.0%
AGCCCACCCAATTGGCACCA+AGG + chr2_4:19162509-19162528 None:intergenic 60.0%
!! GGGTGACAGGGTTGGTGAGA+TGG + chr2_4:19163247-19163266 None:intergenic 60.0%
CCATTAGAGAGAGCGAGGGG+GGG - chr2_4:19164882-19164901 Msa0319450:intron 60.0%
CATTAGAGAGAGCGAGGGGG+GGG - chr2_4:19164883-19164902 Msa0319450:intron 60.0%
ATTAGAGAGAGCGAGGGGGG+GGG - chr2_4:19164884-19164903 Msa0319450:intron 60.0%
! GGGGGAGTTGGTCAATTGGG+GGG + chr2_4:19166035-19166054 None:intergenic 60.0%
! GGGGGGAGTTGGTCAATTGG+GGG + chr2_4:19166036-19166055 None:intergenic 60.0%
AGTCCGTGCTTCAAGCCCCA+GGG + chr2_4:19166098-19166117 None:intergenic 60.0%
!! CCCACTTCGGGTTGGTCTGG+TGG - chr2_4:19162426-19162445 Msa0319450:intron 65.0%
CCCCCCCTCGCTCTCTCTAA+TGG + chr2_4:19164885-19164904 None:intergenic 65.0%
TTAGAGAGAGCGAGGGGGGG+GGG - chr2_4:19164885-19164904 Msa0319450:intron 65.0%
CAGTCCGTGCTTCAAGCCCC+AGG + chr2_4:19166099-19166118 None:intergenic 65.0%
AGGGTGCGCGAGAAGGCAGT+AGG - chr2_4:19167655-19167674 Msa0319450:CDS 65.0%
GGGTGCGCGAGAAGGCAGTA+GGG - chr2_4:19167656-19167675 Msa0319450:CDS 65.0%
TGCGCGAGAAGGCAGTAGGG+TGG - chr2_4:19167659-19167678 Msa0319450:CDS 65.0%
GCGCGAGAAGGCAGTAGGGT+GGG - chr2_4:19167660-19167679 Msa0319450:CDS 65.0%
TAGAGAGAGCGAGGGGGGGG+GGG - chr2_4:19164886-19164905 Msa0319450:intron 70.0%
AGAGAGAGCGAGGGGGGGGG+GGG - chr2_4:19164887-19164906 Msa0319450:intron 75.0%
! GAGAGAGCGAGGGGGGGGGG+GGG - chr2_4:19164888-19164907 Msa0319450:intron 80.0%
! AGAGAGCGAGGGGGGGGGGG+GGG - chr2_4:19164889-19164908 Msa0319450:intron 80.0%
! GAGCGAGGGGGGGGGGGGGG+AGG - chr2_4:19164892-19164911 Msa0319450:intron 90.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 19160226 19167690 19160226 ID=Msa0319450;Name=Msa0319450
chr2_4 mRNA 19160226 19167690 19160226 ID=Msa0319450-mRNA-1;Parent=Msa0319450;Name=Msa0319450-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.6|0.33|0.83|1|1|6|0|218
chr2_4 exon 19167574 19167690 19167574 ID=Msa0319450-mRNA-1:exon:7109;Parent=Msa0319450-mRNA-1
chr2_4 exon 19166167 19166334 19166167 ID=Msa0319450-mRNA-1:exon:7108;Parent=Msa0319450-mRNA-1
chr2_4 exon 19164172 19164269 19164172 ID=Msa0319450-mRNA-1:exon:7107;Parent=Msa0319450-mRNA-1
chr2_4 exon 19163892 19164019 19163892 ID=Msa0319450-mRNA-1:exon:7106;Parent=Msa0319450-mRNA-1
chr2_4 exon 19162621 19162732 19162621 ID=Msa0319450-mRNA-1:exon:7105;Parent=Msa0319450-mRNA-1
chr2_4 exon 19160226 19160259 19160226 ID=Msa0319450-mRNA-1:exon:7104;Parent=Msa0319450-mRNA-1
chr2_4 CDS 19167574 19167690 19167574 ID=Msa0319450-mRNA-1:cds;Parent=Msa0319450-mRNA-1
chr2_4 CDS 19166167 19166334 19166167 ID=Msa0319450-mRNA-1:cds;Parent=Msa0319450-mRNA-1
chr2_4 CDS 19164172 19164269 19164172 ID=Msa0319450-mRNA-1:cds;Parent=Msa0319450-mRNA-1
chr2_4 CDS 19163892 19164019 19163892 ID=Msa0319450-mRNA-1:cds;Parent=Msa0319450-mRNA-1
chr2_4 CDS 19162621 19162732 19162621 ID=Msa0319450-mRNA-1:cds;Parent=Msa0319450-mRNA-1
chr2_4 CDS 19160226 19160259 19160226 ID=Msa0319450-mRNA-1:cds;Parent=Msa0319450-mRNA-1
Gene Sequence

>Msa0319450

ATGTCCTTCAATAGCGATCCTTCAAATCCTATACGCGTTGATTCGAAAGAAAGAGATTGGAAGAATCTTCTTGAACAAGCTCAATTGGAACAGGACTCTGATACTCTCAGGATTCAGGTCAAATACATGTTCTTCGATGGTGATCATTTGAATCATAAATGCGTTGATTTGGGAGGTTGTAGTTGCAAGGAAATTGATAGGAAGAATCTTCTTAAACAAACGCAATTGGAGCGGAATCAACGCTTGTGGTTGCGTGAGCAGAACTCTGCTGCACTTCAGATTCAGAAATGCTTCAGAGCGAAAAAAGTTGTCAGAACGGAACAGTCTAAGTTGCGACAGAAATTCCTTAATATCTATGGAAAGAACTGCCTTAATGTTGACAGGAAAGCTTTTGGTCCAGATTCTGATTTCCTCTGCCAGTTCCTATATTTCTTTAATGCAGAAAACCATGATGATTTTTTAGTTCTTGTGCAAATTTGCCGATTACTTCTACAGTTTGTTCAAGAGAGTGGGGATGCTGTGAAACTTTTTGCTGGTGAGAATTACTCGTCTATATCCGCTTTTGTGAACTACCGAGTGAAGAAACTTGCATATAATTGTATTCGTGCAGTACATCATAATAGGGTGCGCGAGAAGGCAGTAGGGTGGGAAAAGTAA

Protein sequence

>Msa0319450

MSFNSDPSNPIRVDSKERDWKNLLEQAQLEQDSDTLRIQVKYMFFDGDHLNHKCVDLGGCSCKEIDRKNLLKQTQLERNQRLWLREQNSAALQIQKCFRAKKVVRTEQSKLRQKFLNIYGKNCLNVDRKAFGPDSDFLCQFLYFFNAENHDDFLVLVQICRLLLQFVQESGDAVKLFAGENYSSISAFVNYRVKKLAYNCIRAVHHNRVREKAVGWEK*