AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0319580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0319580 MtrunA17_Chr2g0294231 91.099 382 26 6 1 376 1 380 0.0 522
Msa0319580 MtrunA17_Chr1g0194481 47.727 308 130 8 60 362 36 317 2.62e-68 218
Msa0319580 MtrunA17_Chr4g0068541 36.730 422 172 15 17 362 6 408 1.24e-52 180
Msa0319580 MtrunA17_Chr7g0270191 51.531 196 71 4 69 262 35 208 3.56e-52 175
Msa0319580 MtrunA17_Chr5g0418781 43.415 205 85 4 173 372 98 276 9.64e-45 155
Msa0319580 MtrunA17_Chr4g0051881 58.779 131 53 1 145 274 123 253 3.93e-41 147
Msa0319580 MtrunA17_Chr5g0443131 78.750 80 17 0 185 264 143 222 4.89e-40 144
Msa0319580 MtrunA17_Chr8g0335811 66.667 87 28 1 173 259 128 213 1.91e-33 124
Msa0319580 MtrunA17_Chr1g0150801 67.500 80 26 0 177 256 80 159 2.72e-33 122
Msa0319580 MtrunA17_Chr7g0224801 68.000 75 24 0 187 261 81 155 8.42e-32 118
Msa0319580 MtrunA17_Chr7g0248721 38.696 230 94 9 28 257 16 198 9.04e-32 119
Msa0319580 MtrunA17_Chr3g0129361 57.843 102 37 1 160 255 99 200 2.86e-31 118
Msa0319580 MtrunA17_Chr8g0383251 47.107 121 63 1 150 269 59 179 2.24e-30 114
Msa0319580 MtrunA17_Chr3g0129321 58.140 86 35 1 185 269 104 189 3.78e-30 114
Msa0319580 MtrunA17_Chr7g0218081 50.909 110 50 1 155 260 362 471 7.73e-30 120
Msa0319580 MtrunA17_Chr7g0218081 47.872 94 33 2 184 262 198 290 8.67e-19 87.8
Msa0319580 MtrunA17_Chr8g0383351 67.568 74 23 1 183 255 143 216 1.30e-29 114
Msa0319580 MtrunA17_Chr5g0445311 50.427 117 52 1 164 274 323 439 1.82e-29 119
Msa0319580 MtrunA17_Chr5g0445311 58.730 63 25 1 199 261 200 261 3.89e-16 79.7
Msa0319580 MtrunA17_Chr5g0418191 64.474 76 27 0 184 259 305 380 6.63e-29 116
Msa0319580 MtrunA17_Chr5g0418191 60.000 60 23 1 199 258 151 209 3.31e-16 79.7
Msa0319580 MtrunA17_Chr3g0079691 52.381 105 49 1 157 260 452 556 1.48e-28 117
Msa0319580 MtrunA17_Chr3g0079691 57.812 64 26 1 199 262 280 342 1.05e-17 84.7
Msa0319580 MtrunA17_Chr3g0101131 49.194 124 61 2 153 276 370 491 4.48e-28 115
Msa0319580 MtrunA17_Chr3g0101131 59.375 64 25 1 199 262 243 305 4.55e-17 82.8
Msa0319580 MtrunA17_Chr8g0386241 51.111 90 44 0 167 256 71 160 5.86e-28 108
Msa0319580 MtrunA17_Chr3g0106491 63.636 77 28 0 183 259 349 425 7.44e-28 114
Msa0319580 MtrunA17_Chr3g0106491 54.545 66 29 1 199 264 198 262 2.08e-16 80.5
Msa0319580 MtrunA17_Chr5g0432161 44.604 139 49 2 145 283 379 489 8.22e-27 112
Msa0319580 MtrunA17_Chr5g0432161 56.667 60 25 1 199 258 244 302 2.99e-15 77.4
Msa0319580 MtrunA17_Chr4g0042831 46.957 115 52 1 155 260 225 339 9.81e-27 109
Msa0319580 MtrunA17_Chr4g0042831 54.688 64 29 0 199 262 145 208 1.22e-17 83.6
Msa0319580 MtrunA17_Chr7g0249311 50.000 104 50 1 159 260 350 453 1.44e-26 111
Msa0319580 MtrunA17_Chr7g0249311 57.812 64 26 1 199 262 179 241 3.84e-17 83.2
Msa0319580 MtrunA17_Chr7g0249301 58.974 78 32 0 183 260 276 353 2.92e-26 108
Msa0319580 MtrunA17_Chr7g0249301 55.385 65 28 1 198 262 61 124 1.40e-16 80.5
Msa0319580 MtrunA17_Chr4g0004911 59.211 76 31 0 183 258 320 395 6.38e-26 108
Msa0319580 MtrunA17_Chr4g0004911 53.247 77 34 1 199 273 184 260 5.53e-21 94.4
Msa0319580 MtrunA17_Chr7g0243891 39.597 149 74 2 128 260 287 435 6.69e-26 108
Msa0319580 MtrunA17_Chr7g0243891 53.333 75 31 2 199 273 216 286 1.67e-16 80.9
Msa0319580 MtrunA17_Chr1g0188941 51.899 79 38 0 180 258 32 110 1.56e-24 97.1
Msa0319580 MtrunA17_Chr4g0074001 42.982 114 65 0 149 262 309 422 1.02e-23 102
Msa0319580 MtrunA17_Chr4g0075201 50.000 82 40 1 183 263 251 332 1.30e-23 102
Msa0319580 MtrunA17_Chr7g0263531 51.807 83 40 0 184 266 346 428 1.75e-23 101
Msa0319580 MtrunA17_Chr7g0263531 45.833 96 41 3 200 295 190 274 5.02e-17 82.0
Msa0319580 MtrunA17_Chr7g0238921 68.421 57 18 0 199 255 124 180 8.20e-23 97.4
Msa0319580 MtrunA17_Chr3g0099641 48.148 81 41 1 183 262 235 315 1.36e-22 99.0
Msa0319580 MtrunA17_Chr2g0333851 51.163 86 39 2 181 263 149 234 2.80e-22 96.3
Msa0319580 MtrunA17_Chr2g0288871 51.948 77 36 1 183 258 289 365 3.00e-22 98.2
Msa0319580 MtrunA17_Chr7g0270831 44.792 96 48 2 183 277 200 291 7.03e-22 96.7
Msa0319580 MtrunA17_Chr2g0322391 47.500 80 41 1 183 261 333 412 1.03e-21 96.7
Msa0319580 MtrunA17_Chr4g0051181 51.282 78 37 1 183 259 227 304 1.23e-21 96.3
Msa0319580 MtrunA17_Chr7g0216891 50.649 77 37 1 186 261 206 282 4.31e-21 95.1
Msa0319580 MtrunA17_Chr5g0447701 55.696 79 34 1 184 262 237 314 5.50e-21 93.6
Msa0319580 MtrunA17_Chr5g0447701 52.542 59 27 1 200 258 93 150 1.36e-12 68.6
Msa0319580 MtrunA17_Chr4g0025061 36.029 136 75 2 186 320 347 471 1.05e-20 94.0
Msa0319580 MtrunA17_Chr4g0001361 58.065 62 25 1 198 258 161 222 1.63e-20 91.3
Msa0319580 MtrunA17_Chr4g0060271 42.553 94 53 1 166 258 222 315 3.27e-20 92.4
Msa0319580 MtrunA17_Chr2g0302391 45.122 82 44 1 183 263 195 276 7.40e-20 90.5
Msa0319580 MtrunA17_Chr6g0485431 44.444 81 44 1 185 264 140 220 7.84e-20 89.7
Msa0319580 MtrunA17_Chr4g0025051 47.436 78 40 1 186 262 322 399 8.90e-20 90.9
Msa0319580 MtrunA17_Chr7g0270051 50.685 73 35 1 200 271 54 126 1.05e-19 87.8
Msa0319580 MtrunA17_Chr3g0136961 50.000 72 32 2 197 267 136 204 3.99e-19 86.7
Msa0319580 MtrunA17_Chr1g0147881 42.683 82 46 1 175 255 238 319 4.63e-19 87.4
Msa0319580 MtrunA17_Chr5g0401821 43.617 94 52 1 175 267 175 268 9.77e-19 85.1
Msa0319580 MtrunA17_Chr1g0150281 47.297 74 34 2 187 255 124 197 1.54e-18 85.1
Msa0319580 MtrunA17_Chr3g0139021 40.206 97 57 1 160 255 275 371 1.73e-18 86.3
Msa0319580 MtrunA17_Chr4g0053281 42.553 94 53 1 175 267 242 335 2.82e-18 85.1
Msa0319580 MtrunA17_Chr1g0189391 49.296 71 35 1 186 255 84 154 9.88e-18 83.2
Msa0319580 MtrunA17_Chr1g0150271 51.613 62 29 1 198 258 100 161 3.84e-17 80.5
Msa0319580 MtrunA17_Chr4g0071521 41.463 82 47 1 175 255 221 302 4.05e-17 81.3
Msa0319580 MtrunA17_Chr7g0228941 52.381 63 29 1 200 261 53 115 2.45e-16 74.7
Msa0319580 MtrunA17_Chr8g0387501 50.000 62 30 1 198 258 128 189 3.44e-16 77.8
Msa0319580 MtrunA17_Chr2g0293481 51.667 60 28 1 200 258 268 327 7.71e-16 79.0
Msa0319580 MtrunA17_Chr5g0447711 45.333 75 41 0 184 258 215 289 3.73e-15 75.5
Msa0319580 MtrunA17_Chr8g0379461 46.774 62 32 1 200 260 77 138 4.68e-15 74.3
Msa0319580 MtrunA17_Chr7g0248691 40.698 86 42 3 175 258 136 214 5.16e-15 75.5
Msa0319580 MtrunA17_Chr2g0289181 40.260 77 43 2 187 262 4 78 7.24e-15 73.6
Msa0319580 MtrunA17_Chr1g0184691 50.877 57 27 1 200 255 294 350 1.32e-14 74.3
Msa0319580 MtrunA17_Chr4g0024391 32.800 125 72 3 186 309 216 329 1.40e-14 75.1
Msa0319580 MtrunA17_Chr1g0202461 39.080 87 48 3 174 258 238 321 3.10e-14 73.6
Msa0319580 MtrunA17_Chr2g0284321 46.667 60 31 1 200 258 36 95 3.62e-14 71.2
Msa0319580 MtrunA17_Chr8g0387981 39.604 101 57 2 157 254 91 190 4.70e-14 72.8
Msa0319580 MtrunA17_Chr5g0432071 49.206 63 31 1 199 261 104 165 5.66e-14 70.5
Msa0319580 MtrunA17_Chr2g0315361 35.811 148 71 5 162 300 108 240 8.16e-14 71.6
Msa0319580 MtrunA17_Chr2g0319961 35.644 101 58 2 165 258 40 140 1.22e-13 70.5
Msa0319580 MtrunA17_Chr3g0126391 51.667 60 26 1 198 254 132 191 1.31e-13 71.2
Msa0319580 MtrunA17_Chr8g0347251 36.842 95 57 1 163 254 100 194 4.46e-13 69.7
Msa0319580 MtrunA17_Chr7g0275531 50.000 60 27 1 198 254 117 176 4.92e-13 69.3
Msa0319580 MtrunA17_Chr2g0315381 38.053 113 58 3 162 265 104 213 5.25e-13 69.3
Msa0319580 MtrunA17_Chr3g0128671 29.947 187 117 5 105 284 35 214 4.63e-12 66.2
Msa0319580 MtrunA17_Chr7g0244981 47.458 59 28 1 199 254 122 180 8.42e-12 65.1
Msa0319580 MtrunA17_Chr8g0334541 33.083 133 72 5 158 287 63 181 1.87e-11 64.3
Msa0319580 MtrunA17_Chr5g0402931 44.068 59 31 1 198 256 122 178 9.63e-11 60.5
Msa0319580 MtrunA17_Chr7g0244971 43.333 60 31 1 198 254 122 181 9.87e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0319580 AT2G47260.1 44.753 324 140 10 66 368 32 337 8.07e-57 189
Msa0319580 AT5G49520.1 51.185 211 67 6 168 362 190 380 1.15e-49 172
Msa0319580 AT1G69310.4 70.874 103 30 0 172 274 120 222 1.01e-45 159
Msa0319580 AT1G69310.2 70.874 103 30 0 172 274 120 222 1.01e-45 159
Msa0319580 AT1G69310.1 70.874 103 30 0 172 274 120 222 1.01e-45 159
Msa0319580 AT4G18170.1 51.829 164 64 3 114 262 72 235 5.71e-45 157
Msa0319580 AT1G29860.1 47.573 206 80 5 159 362 94 273 6.01e-43 151
Msa0319580 AT1G69310.3 66.990 103 30 1 172 274 120 218 5.17e-40 143
Msa0319580 AT3G62340.1 41.919 198 78 5 177 362 96 268 1.98e-38 139
Msa0319580 AT5G46350.1 59.649 114 44 1 149 262 135 246 5.45e-38 139
Msa0319580 AT2G44745.1 63.830 94 33 1 172 264 118 211 5.50e-35 128
Msa0319580 AT4G39410.1 61.682 107 35 3 172 273 195 300 8.05e-34 127
Msa0319580 AT2G46130.1 61.538 91 35 0 180 270 11 101 8.61e-34 121
Msa0319580 AT5G13080.1 70.423 71 21 0 186 256 54 124 4.69e-32 118
Msa0319580 AT3G01970.1 61.905 84 29 1 186 269 52 132 9.08e-31 115
Msa0319580 AT1G13960.2 66.667 75 25 0 184 258 241 315 1.03e-29 117
Msa0319580 AT1G13960.2 57.812 64 26 1 199 262 76 138 1.45e-17 83.6
Msa0319580 AT2G03340.1 62.069 87 27 1 184 264 400 486 1.30e-29 119
Msa0319580 AT2G03340.1 61.667 60 22 1 199 258 250 308 3.37e-17 83.6
Msa0319580 AT1G13960.1 44.118 136 63 1 136 258 333 468 2.75e-29 119
Msa0319580 AT1G13960.1 57.812 64 26 1 199 262 229 291 1.75e-17 84.3
Msa0319580 AT5G41570.1 59.259 81 33 0 177 257 76 156 1.01e-28 110
Msa0319580 AT2G46130.2 57.143 91 35 1 180 270 11 97 2.21e-28 107
Msa0319580 AT5G26170.1 65.278 72 25 0 186 257 100 171 2.45e-28 109
Msa0319580 AT1G64000.1 59.036 83 34 0 175 257 90 172 3.44e-28 109
Msa0319580 AT5G07100.2 47.863 117 57 2 153 268 98 211 4.94e-28 109
Msa0319580 AT5G07100.2 50.000 64 32 0 199 262 24 87 2.47e-15 74.7
Msa0319580 AT5G07100.4 47.863 117 57 2 153 268 98 211 4.94e-28 109
Msa0319580 AT5G07100.4 50.000 64 32 0 199 262 24 87 2.47e-15 74.7
Msa0319580 AT5G07100.5 47.863 117 57 2 153 268 98 211 4.94e-28 109
Msa0319580 AT5G07100.5 50.000 64 32 0 199 262 24 87 2.47e-15 74.7
Msa0319580 AT5G07100.3 47.863 117 57 2 153 268 98 211 4.94e-28 109
Msa0319580 AT5G07100.3 50.000 64 32 0 199 262 24 87 2.47e-15 74.7
Msa0319580 AT2G38470.1 46.094 128 57 2 180 295 343 470 6.45e-28 115
Msa0319580 AT2G38470.1 56.667 60 25 1 199 258 184 242 1.18e-14 75.9
Msa0319580 AT5G07100.1 47.009 117 58 2 153 268 191 304 9.91e-28 111
Msa0319580 AT5G07100.1 50.000 64 32 0 199 262 117 180 3.56e-15 75.9
Msa0319580 AT3G01080.1 65.333 75 26 0 184 258 291 365 1.12e-27 113
Msa0319580 AT3G01080.1 57.812 64 26 1 199 262 167 229 2.69e-17 83.2
Msa0319580 AT3G01080.2 65.333 75 26 0 184 258 329 403 1.40e-27 113
Msa0319580 AT3G01080.2 57.812 64 26 1 199 262 205 267 3.25e-17 83.2
Msa0319580 AT5G64810.1 54.217 83 38 0 175 257 86 168 1.94e-27 107
Msa0319580 AT4G26640.5 61.538 78 30 0 183 260 189 266 7.01e-27 110
Msa0319580 AT4G26640.5 59.091 66 26 1 199 264 35 99 4.94e-17 82.4
Msa0319580 AT4G26640.6 61.538 78 30 0 183 260 189 266 7.01e-27 110
Msa0319580 AT4G26640.6 59.091 66 26 1 199 264 35 99 4.94e-17 82.4
Msa0319580 AT4G26640.4 61.538 78 30 0 183 260 189 266 7.01e-27 110
Msa0319580 AT4G26640.4 59.091 66 26 1 199 264 35 99 4.94e-17 82.4
Msa0319580 AT4G26640.3 61.538 78 30 0 183 260 189 266 7.01e-27 110
Msa0319580 AT4G26640.3 59.091 66 26 1 199 264 35 99 4.94e-17 82.4
Msa0319580 AT5G56270.1 62.821 78 29 0 183 260 471 548 1.05e-26 112
Msa0319580 AT5G56270.1 54.688 64 28 1 199 262 273 335 1.51e-15 78.6
Msa0319580 AT4G26440.1 49.057 106 54 0 155 260 328 433 1.29e-26 111
Msa0319580 AT4G26440.1 31.746 189 107 4 166 354 145 311 1.79e-16 81.3
Msa0319580 AT4G26640.1 60.494 81 32 0 180 260 290 370 1.78e-26 110
Msa0319580 AT4G26640.1 59.091 66 26 1 199 264 139 203 7.92e-17 82.4
Msa0319580 AT4G26640.7 60.494 81 32 0 180 260 322 402 1.81e-26 110
Msa0319580 AT4G26640.7 59.091 66 26 1 199 264 171 235 8.56e-17 82.4
Msa0319580 AT4G26640.2 60.494 81 32 0 180 260 362 442 2.46e-26 110
Msa0319580 AT4G26640.2 59.091 66 26 1 199 264 211 275 8.88e-17 82.4
Msa0319580 AT2G21900.1 48.315 89 43 1 175 260 82 170 5.57e-25 101
Msa0319580 AT2G30250.1 56.627 83 36 0 180 262 309 391 1.44e-24 104
Msa0319580 AT2G30250.1 53.623 69 30 2 199 266 166 233 1.74e-13 71.6
Msa0319580 AT2G04880.2 58.904 73 30 0 186 258 270 342 1.94e-24 104
Msa0319580 AT2G04880.2 37.168 113 70 1 198 310 110 221 2.25e-16 80.9
Msa0319580 AT2G04880.1 46.789 109 50 1 158 258 258 366 2.37e-24 104
Msa0319580 AT2G04880.1 41.053 95 54 2 198 292 110 202 3.84e-16 80.1
Msa0319580 AT1G55600.1 57.534 73 31 0 186 258 294 366 3.38e-23 101
Msa0319580 AT4G04450.2 39.007 141 72 4 183 320 182 311 4.87e-23 100
Msa0319580 AT4G04450.1 39.007 141 72 4 183 320 276 405 1.02e-22 100
Msa0319580 AT1G80840.1 45.545 101 49 3 162 259 110 207 3.31e-22 95.9
Msa0319580 AT2G37260.3 47.423 97 45 2 159 255 235 325 4.68e-22 96.3
Msa0319580 AT2G37260.3 53.125 64 29 1 200 263 86 148 1.13e-14 75.1
Msa0319580 AT2G37260.2 47.423 97 45 2 159 255 233 323 4.84e-22 96.3
Msa0319580 AT2G37260.2 53.125 64 29 1 200 263 84 146 1.16e-14 74.7
Msa0319580 AT1G62300.1 51.948 77 36 1 183 258 296 372 5.04e-22 98.2
Msa0319580 AT4G22070.4 51.948 77 36 1 183 258 281 357 5.71e-22 97.8
Msa0319580 AT4G22070.3 51.948 77 36 1 183 258 281 357 5.71e-22 97.8
Msa0319580 AT4G22070.2 51.948 77 36 1 183 258 281 357 5.71e-22 97.8
Msa0319580 AT4G22070.1 51.948 77 36 1 183 258 281 357 5.71e-22 97.8
Msa0319580 AT2G37260.1 47.423 97 45 2 159 255 315 405 6.50e-22 97.1
Msa0319580 AT2G37260.1 53.125 64 29 1 200 263 166 228 1.52e-14 75.1
Msa0319580 AT1G68150.1 39.496 119 55 3 183 300 219 321 5.23e-21 93.6
Msa0319580 AT1G18860.1 50.649 77 37 1 183 258 223 299 9.02e-21 94.4
Msa0319580 AT5G43290.1 64.912 57 20 0 199 255 114 170 3.13e-20 89.7
Msa0319580 AT4G01720.1 44.330 97 52 2 164 258 203 299 3.37e-20 92.4
Msa0319580 AT5G15130.2 45.238 84 45 1 179 261 165 248 4.40e-20 92.0
Msa0319580 AT5G15130.1 45.238 84 45 1 179 261 207 290 5.26e-20 92.0
Msa0319580 AT4G30935.1 45.977 87 40 1 173 259 312 391 2.50e-19 89.7
Msa0319580 AT4G30935.1 52.542 59 27 1 200 258 169 226 4.06e-11 64.7
Msa0319580 AT4G31800.2 53.846 65 29 1 198 261 110 174 6.44e-19 85.5
Msa0319580 AT2G25000.2 53.846 65 29 1 198 261 102 166 9.39e-19 84.7
Msa0319580 AT2G25000.4 53.846 65 29 1 198 261 102 166 9.39e-19 84.7
Msa0319580 AT4G31800.1 53.846 65 29 1 198 261 175 239 1.02e-18 86.3
Msa0319580 AT2G25000.3 53.846 65 29 1 198 261 124 188 1.46e-18 84.7
Msa0319580 AT2G25000.1 53.846 65 29 1 198 261 145 209 2.40e-18 84.3
Msa0319580 AT2G23320.1 46.341 82 43 1 175 255 216 297 2.42e-18 85.1
Msa0319580 AT2G30590.1 36.697 109 65 2 152 256 263 371 3.47e-18 85.5
Msa0319580 AT1G29280.1 53.968 63 28 1 200 261 75 137 4.68e-18 83.6
Msa0319580 AT4G31550.2 43.902 82 45 1 175 255 221 302 9.39e-18 83.6
Msa0319580 AT3G01080.3 57.812 64 26 1 199 262 205 267 1.72e-17 82.8
Msa0319580 AT2G24570.1 45.455 88 46 2 169 255 214 300 2.43e-17 82.4
Msa0319580 AT5G52830.1 45.882 85 40 3 175 258 146 225 3.24e-17 82.4
Msa0319580 AT4G31550.1 44.318 88 47 2 169 255 217 303 3.37e-17 82.0
Msa0319580 AT5G45050.4 33.939 165 94 4 105 258 941 1101 8.92e-17 82.8
Msa0319580 AT4G24240.1 36.290 124 77 2 133 255 216 338 9.83e-17 81.3
Msa0319580 AT5G45050.1 33.939 165 94 4 105 258 1080 1240 1.13e-16 82.4
Msa0319580 AT5G45050.2 33.939 165 94 4 105 258 1052 1212 1.23e-16 82.4
Msa0319580 AT3G04670.1 41.463 82 47 1 175 255 238 319 3.39e-16 79.3
Msa0319580 AT5G28650.1 40.244 82 48 1 175 255 238 319 5.64e-16 78.6
Msa0319580 AT1G69810.1 44.872 78 41 2 183 258 187 264 5.95e-16 79.0
Msa0319580 AT1G69810.2 44.872 78 41 2 183 258 129 206 5.97e-16 78.6
Msa0319580 AT1G30650.1 53.333 60 27 1 200 258 218 277 6.64e-16 79.3
Msa0319580 AT3G58710.2 30.000 210 108 7 191 376 62 256 1.13e-15 77.0
Msa0319580 AT4G01250.1 50.000 60 29 1 200 258 129 188 1.14e-15 77.4
Msa0319580 AT2G34830.1 51.667 60 28 1 200 258 216 275 1.30e-15 78.2
Msa0319580 AT3G58710.1 30.000 210 108 7 191 376 63 257 1.32e-15 76.6
Msa0319580 AT2G34830.2 51.667 60 28 1 200 258 225 284 1.42e-15 78.2
Msa0319580 AT5G45260.1 37.143 140 81 4 131 266 1141 1277 3.50e-15 77.8
Msa0319580 AT1G66600.1 33.582 134 83 3 127 254 28 161 5.39e-14 71.6
Msa0319580 AT1G66560.1 47.692 65 31 1 199 260 103 167 5.49e-14 71.6
Msa0319580 AT2G46400.1 36.449 107 60 2 151 254 61 162 6.16e-14 72.0
Msa0319580 AT4G12020.6 37.931 116 58 3 116 219 548 661 8.42e-14 73.6
Msa0319580 AT4G12020.6 48.387 62 31 1 197 258 466 526 1.99e-12 69.3
Msa0319580 AT4G12020.8 37.931 116 58 3 116 219 548 661 8.42e-14 73.6
Msa0319580 AT4G12020.8 48.387 62 31 1 197 258 466 526 1.99e-12 69.3
Msa0319580 AT4G12020.10 37.931 116 58 3 116 219 548 661 8.65e-14 73.6
Msa0319580 AT4G12020.10 48.387 62 31 1 197 258 466 526 1.90e-12 69.7
Msa0319580 AT4G12020.3 37.931 116 58 3 116 219 548 661 8.89e-14 73.6
Msa0319580 AT4G12020.3 48.387 62 31 1 197 258 466 526 2.01e-12 69.3
Msa0319580 AT4G12020.2 37.931 116 58 3 116 219 548 661 8.90e-14 73.6
Msa0319580 AT4G12020.2 48.387 62 31 1 197 258 466 526 2.20e-12 69.3
Msa0319580 AT4G12020.4 37.931 116 58 3 116 219 548 661 9.39e-14 73.6
Msa0319580 AT4G12020.4 48.387 62 31 1 197 258 466 526 2.08e-12 69.3
Msa0319580 AT4G12020.7 37.931 116 58 3 116 219 548 661 9.65e-14 73.6
Msa0319580 AT4G12020.7 48.387 62 31 1 197 258 466 526 2.22e-12 69.3
Msa0319580 AT4G12020.1 37.931 116 58 3 116 219 548 661 9.66e-14 73.6
Msa0319580 AT4G12020.1 48.387 62 31 1 197 258 466 526 2.18e-12 69.3
Msa0319580 AT4G12020.9 37.931 116 58 3 116 219 548 661 9.66e-14 73.6
Msa0319580 AT4G12020.9 48.387 62 31 1 197 258 466 526 2.18e-12 69.3
Msa0319580 AT4G12020.11 37.931 116 58 3 116 219 548 661 9.96e-14 73.6
Msa0319580 AT4G12020.11 48.387 62 31 1 197 258 466 526 3.05e-12 68.9
Msa0319580 AT4G12020.5 37.931 116 58 3 116 219 481 594 1.14e-13 73.2
Msa0319580 AT4G12020.5 48.387 62 31 1 197 258 399 459 2.30e-12 69.3
Msa0319580 AT4G23810.1 46.479 71 35 1 199 266 158 228 3.35e-13 70.5
Msa0319580 AT4G23550.1 45.455 66 35 1 194 258 135 200 3.48e-13 70.1
Msa0319580 AT4G11070.2 34.959 123 59 4 147 254 51 167 4.41e-13 69.3
Msa0319580 AT4G11070.1 34.959 123 59 4 147 254 83 199 6.34e-13 69.3
Msa0319580 AT2G40740.1 29.861 144 72 5 174 288 144 287 1.30e-12 68.2
Msa0319580 AT2G40740.3 29.861 144 72 5 174 288 153 296 1.32e-12 68.2
Msa0319580 AT1G80590.1 46.154 65 32 1 200 261 86 150 1.49e-12 67.0
Msa0319580 AT5G24110.1 36.275 102 50 4 161 254 77 171 2.58e-12 67.4
Msa0319580 AT3G56400.1 34.343 99 62 1 159 254 80 178 2.87e-12 67.0
Msa0319580 AT2G40750.1 49.153 59 27 1 199 254 152 210 1.21e-11 65.9
Msa0319580 AT1G66550.2 47.458 59 28 1 199 254 103 161 2.17e-11 63.9
Msa0319580 AT1G66550.1 47.458 59 28 1 199 254 108 166 2.55e-11 63.9

Find 91 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTCATGAAAGCAAATC+TGG 0.203637 2_4:+19370422 None:intergenic
GGGATTAATCATCGAGGTTT+TGG 0.240176 2_4:-19369791 Msa0319580:CDS
TTGACATTGTAGCTTATAAA+AGG 0.246864 2_4:-19369509 Msa0319580:three_prime_UTR
GAGGCTTTGTTAAGAGATAA+TGG 0.260189 2_4:-19369749 Msa0319580:CDS
GGCTATAGGTGGCGTAAATA+TGG 0.275141 2_4:-19370375 Msa0319580:CDS
CAAAGAAGAGCTCATATAAA+AGG 0.284086 2_4:+19369435 None:intergenic
TAGCTTCGGTGCTGCTGCTT+CGG 0.290732 2_4:-19369978 Msa0319580:CDS
ATCTTCTTCTTATGGTTTCA+TGG 0.294886 2_4:-19371563 Msa0319580:CDS
TCTTAGTCTTGTCTTGATCT+TGG 0.299773 2_4:+19371266 None:intergenic
AGCTTCGGTGCTGCTGCTTC+GGG 0.319153 2_4:-19369977 Msa0319580:CDS
TTTACCTCTATGCTGTTCTA+AGG 0.320002 2_4:+19371324 None:intergenic
TTATGGTTTCATGGACTTGT+TGG 0.324974 2_4:-19371554 Msa0319580:CDS
TTTATATGAAGTTAACCTTT+TGG 0.350491 2_4:-19369582 Msa0319580:three_prime_UTR
TATGGTTTCATGGACTTGTT+GGG 0.360903 2_4:-19371553 Msa0319580:CDS
AGTAGTAATATTATTACTAA+TGG 0.370366 2_4:+19369904 None:intergenic
TTGTTGATGGTGGTGGTTGT+TGG 0.398212 2_4:+19371667 None:intergenic
AGATGTGTTATTGTTGTTGA+TGG 0.400348 2_4:+19371654 None:intergenic
GTTGAGATTGAAGGTTGAAA+AGG 0.402624 2_4:+19371625 None:intergenic
TTCAATACCTCGGATGAATC+CGG 0.413732 2_4:+19371412 None:intergenic
AGGCTTTGTTAAGAGATAAT+GGG 0.416894 2_4:-19369748 Msa0319580:CDS
TGTTGTTGTTGATGTAATCA+TGG 0.426264 2_4:+19371527 None:intergenic
ATCTTCAGGGTTTGTTAATG+AGG 0.433650 2_4:-19369768 Msa0319580:CDS
TTGAGATTGAAGGTTGAAAA+GGG 0.436527 2_4:+19371626 None:intergenic
TATGTTAACACGTCGAGGTT+TGG 0.438478 2_4:-19369833 Msa0319580:CDS
GGTGGTGGTGGATGATGAGT+TGG 0.447272 2_4:+19371714 None:intergenic
GAAGAAATCGAACAAGAATT+CGG 0.447286 2_4:+19371376 None:intergenic
CCTTCTTCTAGTTATGTTGG+TGG 0.451903 2_4:-19369869 Msa0319580:CDS
ACAACATTAATGATTATAGA+TGG 0.454138 2_4:-19369672 Msa0319580:exon
GAATGCCATGGTGGTGGTGG+TGG 0.463366 2_4:+19371702 None:intergenic
TGTGTTATTGTTGTTGATGG+TGG 0.471765 2_4:+19371657 None:intergenic
AACCTCGATGATTAATCCCT+TGG 0.473918 2_4:+19369795 None:intergenic
GGTGGTGGATGATGAGTTGG+TGG 0.474733 2_4:+19371717 None:intergenic
GCAGCAGCACCGAAGCTAGT+AGG 0.480139 2_4:+19369983 None:intergenic
ATGTGTATGTACCTGGGAAA+AGG 0.480385 2_4:+19370330 None:intergenic
TGGTGAACCAAGCTGAGGTT+AGG 0.480823 2_4:+19370007 None:intergenic
TTAATGATTATAGATGGTAT+TGG 0.488461 2_4:-19369666 Msa0319580:exon
CAAATCAATTAACCACCAAA+AGG 0.491372 2_4:+19369540 None:intergenic
GTTATTGTTGTTGATGGTGG+TGG 0.494136 2_4:+19371660 None:intergenic
GTGGTGGATGATGAGTTGGT+GGG 0.499412 2_4:+19371718 None:intergenic
GTTCACCAACCTACTAGCTT+CGG 0.509728 2_4:-19369992 Msa0319580:CDS
TTATTATTGTACAACAATGT+TGG 0.511800 2_4:+19369932 None:intergenic
AGGTTAGGACGTGACGTGGC+AGG 0.517051 2_4:+19370022 None:intergenic
CCATCACACTCTTTCGTCAC+CGG 0.521634 2_4:-19371449 Msa0319580:CDS
AGTTATGTTGGTGGTTCTAG+TGG 0.524071 2_4:-19369860 Msa0319580:CDS
TTTGTCATGAAAGCAAATCT+GGG 0.531240 2_4:+19370423 None:intergenic
GAAGTTGATCACTTAGATGA+TGG 0.532713 2_4:-19370396 Msa0319580:CDS
GGAGAATGCCATGGTGGTGG+TGG 0.535464 2_4:+19371699 None:intergenic
ATCACTTAGATGATGGCTAT+AGG 0.537567 2_4:-19370389 Msa0319580:CDS
CCACCAACATAACTAGAAGA+AGG 0.538338 2_4:+19369869 None:intergenic
GGACGTGACGTGGCAGGAGA+AGG 0.541957 2_4:+19370028 None:intergenic
TCAATACCTCGGATGAATCC+GGG 0.548808 2_4:+19371413 None:intergenic
ACCGGTGAGTTCTAACATCC+CGG 0.555255 2_4:-19371431 Msa0319580:CDS
CACCAACATAACTAGAAGAA+GGG 0.557197 2_4:+19369870 None:intergenic
GACGACAATTGAAGAATCAT+CGG 0.560070 2_4:+19370078 None:intergenic
GTTAACACGTCGAGGTTTGG+TGG 0.560475 2_4:-19369830 Msa0319580:CDS
TTCCTCGTCTAATGAAGCAA+CGG 0.560515 2_4:-19371356 Msa0319580:CDS
ACCAACATAACTAGAAGAAG+GGG 0.561388 2_4:+19369871 None:intergenic
GTTGTTGTTGATGTAATCAT+GGG 0.562636 2_4:+19371528 None:intergenic
ATCGGAGAATGCCATGGTGG+TGG 0.569160 2_4:+19371696 None:intergenic
GTTGTTGTCGTCGTGACGGT+GGG 0.572884 2_4:+19371478 None:intergenic
GAACAAGAATTCGGTGACAC+CGG 0.578343 2_4:+19371385 None:intergenic
TTATGTATCAATACAAAGCA+TGG 0.580749 2_4:+19371788 None:intergenic
GTCACGTCCTAACCTCAGCT+TGG 0.584476 2_4:-19370014 Msa0319580:CDS
TGGTGGATGATGAGTTGGTG+GGG 0.586606 2_4:+19371719 None:intergenic
TGTTGTTGTTGTCGTCGTGA+CGG 0.589333 2_4:+19371474 None:intergenic
AATTGTCGTCACTACTTACG+AGG 0.589893 2_4:-19370065 Msa0319580:CDS
GTCACAAGAGGAAGATGGCA+TGG 0.590984 2_4:+19371591 None:intergenic
TGTTGTTGTCGTCGTGACGG+TGG 0.605267 2_4:+19371477 None:intergenic
CGGTGACGAAAGAGTGTGAT+GGG 0.606679 2_4:+19371450 None:intergenic
TCCGGGATGTTAGAACTCAC+CGG 0.608361 2_4:+19371430 None:intergenic
CACCGGAGTGTTCAATACCT+CGG 0.611727 2_4:+19371402 None:intergenic
CAGCACCGAAGCTAGTAGGT+TGG 0.627050 2_4:+19369987 None:intergenic
CGTTGTACAACGGCAAGTTG+CGG 0.640509 2_4:-19370127 Msa0319580:CDS
AACACCTTAGAACAGCATAG+AGG 0.642711 2_4:-19371328 Msa0319580:CDS
AACCGTTGCTTCATTAGACG+AGG 0.647141 2_4:+19371354 None:intergenic
GGTGGTTGTTGGAATCTCAT+CGG 0.650893 2_4:+19371678 None:intergenic
CTCATCGGAGAATGCCATGG+TGG 0.653913 2_4:+19371693 None:intergenic
AATCTCATCGGAGAATGCCA+TGG 0.653929 2_4:+19371690 None:intergenic
CCGGTGACGAAAGAGTGTGA+TGG 0.655487 2_4:+19371449 None:intergenic
GTAGTTATGTTAACACGTCG+AGG 0.660908 2_4:-19369838 Msa0319580:CDS
GCTGAGGTTAGGACGTGACG+TGG 0.673834 2_4:+19370018 None:intergenic
AATGGAGGAGGAGAAGAGAG+AGG 0.674118 2_4:-19371752 Msa0319580:CDS
TAACATCCCGGATTCATCCG+AGG 0.676510 2_4:-19371419 Msa0319580:CDS
ATCCGAGGTATTGAACACTC+CGG 0.680816 2_4:-19371404 Msa0319580:CDS
ACTTAGATGATGGCTATAGG+TGG 0.681297 2_4:-19370386 Msa0319580:CDS
TAGGTTGGTGAACCAAGCTG+AGG 0.686519 2_4:+19370002 None:intergenic
TAAACAAAATCAAAATCACA+AGG 0.697337 2_4:+19369486 None:intergenic
GAGCTACTATCGTTGTACAA+CGG 0.728393 2_4:-19370137 Msa0319580:CDS
ATTGTCGTCACTACTTACGA+GGG 0.730012 2_4:-19370064 Msa0319580:CDS
GACCAAGGGATTAATCATCG+AGG 0.748189 2_4:-19369797 Msa0319580:CDS
CCAACATAACTAGAAGAAGG+GGG 0.750249 2_4:+19369872 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAAATTAAAAA+AGG - chr2_4:19369486-19369505 Msa0319580:three_prime_UTR 0.0%
!! AATAAAATAAAAATTAAAAA+AGG - chr2_4:19369486-19369505 Msa0319580:three_prime_UTR 0.0%
!!! TTATTTTTGCTTTTTATTTT+TGG + chr2_4:19369471-19369490 None:intergenic 10.0%
!! TACTAAATAAAATAGAAATA+AGG - chr2_4:19370325-19370344 Msa0319580:intron 10.0%
!! ACTAAATAAAATAGAAATAA+GGG - chr2_4:19370326-19370345 Msa0319580:intron 10.0%
!! ATTTATTACATGTATAATAA+TGG - chr2_4:19370414-19370433 Msa0319580:CDS 10.0%
!!! TTCACTAATTAATTTAATTT+GGG - chr2_4:19371069-19371088 Msa0319580:intron 10.0%
!!! TTATTTTTGCTTTTTATTTT+TGG + chr2_4:19369471-19369490 None:intergenic 10.0%
!! TACTAAATAAAATAGAAATA+AGG - chr2_4:19370325-19370344 Msa0319580:intron 10.0%
!! ACTAAATAAAATAGAAATAA+GGG - chr2_4:19370326-19370345 Msa0319580:intron 10.0%
!! ATTTATTACATGTATAATAA+TGG - chr2_4:19370414-19370433 Msa0319580:CDS 10.0%
!!! TTCACTAATTAATTTAATTT+GGG - chr2_4:19371069-19371088 Msa0319580:intron 10.0%
!! AGCATAATTATACTAATTAA+TGG - chr2_4:19370794-19370813 Msa0319580:intron 15.0%
!! GTTCACTAATTAATTTAATT+TGG - chr2_4:19371068-19371087 Msa0319580:intron 15.0%
!!! ATAATATAATTTTTGACTTG+TGG - chr2_4:19371110-19371129 Msa0319580:intron 15.0%
!!! TAATATAATTTTTGACTTGT+GGG - chr2_4:19371111-19371130 Msa0319580:intron 15.0%
!! AGTAGTAATATTATTACTAA+TGG + chr2_4:19371404-19371423 None:intergenic 15.0%
!! AGCATAATTATACTAATTAA+TGG - chr2_4:19370794-19370813 Msa0319580:intron 15.0%
!! GTTCACTAATTAATTTAATT+TGG - chr2_4:19371068-19371087 Msa0319580:intron 15.0%
!!! ATAATATAATTTTTGACTTG+TGG - chr2_4:19371110-19371129 Msa0319580:intron 15.0%
!!! TAATATAATTTTTGACTTGT+GGG - chr2_4:19371111-19371130 Msa0319580:intron 15.0%
!! AGTAGTAATATTATTACTAA+TGG + chr2_4:19371404-19371423 None:intergenic 15.0%
!!! CAACAACACTTTTTTATTAT+CGG - chr2_4:19369796-19369815 Msa0319580:CDS 20.0%
!! TAATGGCTTAATTAATGATT+TGG - chr2_4:19370431-19370450 Msa0319580:CDS 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr2_4:19370647-19370666 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr2_4:19370646-19370665 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr2_4:19370491-19370510 Msa0319580:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr2_4:19370647-19370666 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr2_4:19370646-19370665 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr2_4:19370491-19370510 Msa0319580:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr2_4:19370491-19370510 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr2_4:19370646-19370665 Msa0319580:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr2_4:19370647-19370666 Msa0319580:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr2_4:19370491-19370510 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr2_4:19370646-19370665 Msa0319580:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr2_4:19370647-19370666 Msa0319580:intron 20.0%
!! TATAGGCTTAATTAATGATT+TGG + chr2_4:19370734-19370753 None:intergenic 20.0%
!!! TTTTTTTGGTTCTTTTTCTT+TGG + chr2_4:19370852-19370871 None:intergenic 20.0%
!! AAAGAAAAAGAACCAAAAAA+AGG - chr2_4:19370851-19370870 Msa0319580:intron 20.0%
!! AAGAAAATTGAGAAATGAAA+TGG + chr2_4:19371017-19371036 None:intergenic 20.0%
!! TTATTATTGTACAACAATGT+TGG + chr2_4:19371376-19371395 None:intergenic 20.0%
!! ACAACATTAATGATTATAGA+TGG - chr2_4:19371633-19371652 Msa0319580:CDS 20.0%
!! TTAATGATTATAGATGGTAT+TGG - chr2_4:19371639-19371658 Msa0319580:CDS 20.0%
!!! TTTATATGAAGTTAACCTTT+TGG - chr2_4:19371723-19371742 Msa0319580:CDS 20.0%
!! TAAACAAAATCAAAATCACA+AGG + chr2_4:19371822-19371841 None:intergenic 20.0%
!!! CAACAACACTTTTTTATTAT+CGG - chr2_4:19369796-19369815 Msa0319580:CDS 20.0%
!! TAATGGCTTAATTAATGATT+TGG - chr2_4:19370431-19370450 Msa0319580:CDS 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr2_4:19370647-19370666 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr2_4:19370646-19370665 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr2_4:19370491-19370510 Msa0319580:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr2_4:19370647-19370666 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr2_4:19370646-19370665 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr2_4:19370491-19370510 Msa0319580:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr2_4:19370491-19370510 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr2_4:19370646-19370665 Msa0319580:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr2_4:19370647-19370666 Msa0319580:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr2_4:19370491-19370510 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr2_4:19370646-19370665 Msa0319580:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr2_4:19370647-19370666 Msa0319580:intron 20.0%
!! TATAGGCTTAATTAATGATT+TGG + chr2_4:19370734-19370753 None:intergenic 20.0%
!!! TTTTTTTGGTTCTTTTTCTT+TGG + chr2_4:19370852-19370871 None:intergenic 20.0%
!! AAAGAAAAAGAACCAAAAAA+AGG - chr2_4:19370851-19370870 Msa0319580:intron 20.0%
!! AAGAAAATTGAGAAATGAAA+TGG + chr2_4:19371017-19371036 None:intergenic 20.0%
!! TTATTATTGTACAACAATGT+TGG + chr2_4:19371376-19371395 None:intergenic 20.0%
!! ACAACATTAATGATTATAGA+TGG - chr2_4:19371633-19371652 Msa0319580:CDS 20.0%
!! TTAATGATTATAGATGGTAT+TGG - chr2_4:19371639-19371658 Msa0319580:CDS 20.0%
!!! TTTATATGAAGTTAACCTTT+TGG - chr2_4:19371723-19371742 Msa0319580:CDS 20.0%
!! TAAACAAAATCAAAATCACA+AGG + chr2_4:19371822-19371841 None:intergenic 20.0%
! TTATGTATCAATACAAAGCA+TGG + chr2_4:19369520-19369539 None:intergenic 25.0%
! CATAACAGCATAAAAATCAA+TGG - chr2_4:19369535-19369554 Msa0319580:three_prime_UTR 25.0%
! TCAAAAAAAGTTGAGATTGA+AGG + chr2_4:19369692-19369711 None:intergenic 25.0%
!! AACCATAAGAAGAAGATTTT+TGG + chr2_4:19369739-19369758 None:intergenic 25.0%
!!! ACACTTTTTTATTATCGGAT+TGG - chr2_4:19369801-19369820 Msa0319580:CDS 25.0%
!!! CACTTTTTTATTATCGGATT+GGG - chr2_4:19369802-19369821 Msa0319580:CDS 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr2_4:19370707-19370726 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr2_4:19370706-19370725 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr2_4:19370462-19370481 Msa0319580:CDS 25.0%
! GAAACCAACAAATAACTTAA+GGG + chr2_4:19370618-19370637 None:intergenic 25.0%
! CCTTAACTCTAATAACTTAT+GGG + chr2_4:19370578-19370597 None:intergenic 25.0%
! CCATAAGTTATTAGAGTTAA+GGG - chr2_4:19370576-19370595 Msa0319580:intron 25.0%
! GAAACCAACAAATAACTTAA+GGG - chr2_4:19370618-19370637 Msa0319580:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + chr2_4:19370462-19370481 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr2_4:19370706-19370725 Msa0319580:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr2_4:19370707-19370726 Msa0319580:intron 25.0%
!! TATATATCTTTTGCAGCTAT+AGG - chr2_4:19371694-19371713 Msa0319580:CDS 25.0%
!! TCTCTCAAAAAAAAACCTTT+TGG - chr2_4:19371750-19371769 Msa0319580:CDS 25.0%
! TTGACATTGTAGCTTATAAA+AGG - chr2_4:19371796-19371815 Msa0319580:five_prime_UTR 25.0%
! TTATGTATCAATACAAAGCA+TGG + chr2_4:19369520-19369539 None:intergenic 25.0%
! CATAACAGCATAAAAATCAA+TGG - chr2_4:19369535-19369554 Msa0319580:three_prime_UTR 25.0%
! TCAAAAAAAGTTGAGATTGA+AGG + chr2_4:19369692-19369711 None:intergenic 25.0%
!! AACCATAAGAAGAAGATTTT+TGG + chr2_4:19369739-19369758 None:intergenic 25.0%
!!! ACACTTTTTTATTATCGGAT+TGG - chr2_4:19369801-19369820 Msa0319580:CDS 25.0%
!!! CACTTTTTTATTATCGGATT+GGG - chr2_4:19369802-19369821 Msa0319580:CDS 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr2_4:19370707-19370726 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr2_4:19370706-19370725 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr2_4:19370462-19370481 Msa0319580:CDS 25.0%
! GAAACCAACAAATAACTTAA+GGG + chr2_4:19370618-19370637 None:intergenic 25.0%
! CCTTAACTCTAATAACTTAT+GGG + chr2_4:19370578-19370597 None:intergenic 25.0%
! CCATAAGTTATTAGAGTTAA+GGG - chr2_4:19370576-19370595 Msa0319580:intron 25.0%
! GAAACCAACAAATAACTTAA+GGG - chr2_4:19370618-19370637 Msa0319580:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + chr2_4:19370462-19370481 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr2_4:19370706-19370725 Msa0319580:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr2_4:19370707-19370726 Msa0319580:intron 25.0%
!! TATATATCTTTTGCAGCTAT+AGG - chr2_4:19371694-19371713 Msa0319580:CDS 25.0%
!! TCTCTCAAAAAAAAACCTTT+TGG - chr2_4:19371750-19371769 Msa0319580:CDS 25.0%
! TTGACATTGTAGCTTATAAA+AGG - chr2_4:19371796-19371815 Msa0319580:five_prime_UTR 25.0%
AACAGCATAAAAATCAATGG+AGG - chr2_4:19369538-19369557 Msa0319580:three_prime_UTR 30.0%
! AGATGTGTTATTGTTGTTGA+TGG + chr2_4:19369654-19369673 None:intergenic 30.0%
TTGAGATTGAAGGTTGAAAA+GGG + chr2_4:19369682-19369701 None:intergenic 30.0%
GACCAAAAATCTTCTTCTTA+TGG - chr2_4:19369734-19369753 Msa0319580:CDS 30.0%
ATCTTCTTCTTATGGTTTCA+TGG - chr2_4:19369742-19369761 Msa0319580:CDS 30.0%
! GTTGTTGTTGATGTAATCAT+GGG + chr2_4:19369780-19369799 None:intergenic 30.0%
! TGTTGTTGTTGATGTAATCA+TGG + chr2_4:19369781-19369800 None:intergenic 30.0%
GAAGAAATCGAACAAGAATT+CGG + chr2_4:19369932-19369951 None:intergenic 30.0%
AAAAATGAAGCAGAGTTAGA+AGG - chr2_4:19370010-19370029 Msa0319580:CDS 30.0%
CGAAACCAACAAATAACTTA+AGG + chr2_4:19370617-19370636 None:intergenic 30.0%
!!! GTTATTTGTTGGTTTCGTTT+TGG - chr2_4:19370551-19370570 Msa0319580:intron 30.0%
CCCATAAGTTATTAGAGTTA+AGG - chr2_4:19370575-19370594 Msa0319580:intron 30.0%
CCCTTAACTCTAATAACTTA+TGG + chr2_4:19370579-19370598 None:intergenic 30.0%
!!! GTTATTTGTTGGTTTCGTTT+TGG + chr2_4:19370551-19370570 None:intergenic 30.0%
CGAAACCAACAAATAACTTA+AGG - chr2_4:19370617-19370636 Msa0319580:intron 30.0%
TTTGTCATGAAAGCAAATCT+GGG + chr2_4:19370885-19370904 None:intergenic 30.0%
AAGATTATGTGTATGTACCT+GGG + chr2_4:19370984-19371003 None:intergenic 30.0%
TAAGATTATGTGTATGTACC+TGG + chr2_4:19370985-19371004 None:intergenic 30.0%
ACTACTACACTGTTTATTGT+AGG + chr2_4:19371050-19371069 None:intergenic 30.0%
!! AGGCTTTGTTAAGAGATAAT+GGG - chr2_4:19371557-19371576 Msa0319580:CDS 30.0%
! ATATGAAGTTAACCTTTTGG+TGG - chr2_4:19371726-19371745 Msa0319580:CDS 30.0%
! CTCAAAAAAAAACCTTTTGG+TGG - chr2_4:19371753-19371772 Msa0319580:CDS 30.0%
CAAATCAATTAACCACCAAA+AGG + chr2_4:19371768-19371787 None:intergenic 30.0%
!! CTTTTGGTGGTTAATTGATT+TGG - chr2_4:19371766-19371785 Msa0319580:exon 30.0%
AACAGCATAAAAATCAATGG+AGG - chr2_4:19369538-19369557 Msa0319580:three_prime_UTR 30.0%
! AGATGTGTTATTGTTGTTGA+TGG + chr2_4:19369654-19369673 None:intergenic 30.0%
TTGAGATTGAAGGTTGAAAA+GGG + chr2_4:19369682-19369701 None:intergenic 30.0%
GACCAAAAATCTTCTTCTTA+TGG - chr2_4:19369734-19369753 Msa0319580:CDS 30.0%
ATCTTCTTCTTATGGTTTCA+TGG - chr2_4:19369742-19369761 Msa0319580:CDS 30.0%
! GTTGTTGTTGATGTAATCAT+GGG + chr2_4:19369780-19369799 None:intergenic 30.0%
! TGTTGTTGTTGATGTAATCA+TGG + chr2_4:19369781-19369800 None:intergenic 30.0%
GAAGAAATCGAACAAGAATT+CGG + chr2_4:19369932-19369951 None:intergenic 30.0%
AAAAATGAAGCAGAGTTAGA+AGG - chr2_4:19370010-19370029 Msa0319580:CDS 30.0%
CGAAACCAACAAATAACTTA+AGG + chr2_4:19370617-19370636 None:intergenic 30.0%
!!! GTTATTTGTTGGTTTCGTTT+TGG - chr2_4:19370551-19370570 Msa0319580:intron 30.0%
CCCATAAGTTATTAGAGTTA+AGG - chr2_4:19370575-19370594 Msa0319580:intron 30.0%
CCCTTAACTCTAATAACTTA+TGG + chr2_4:19370579-19370598 None:intergenic 30.0%
!!! GTTATTTGTTGGTTTCGTTT+TGG + chr2_4:19370551-19370570 None:intergenic 30.0%
CGAAACCAACAAATAACTTA+AGG - chr2_4:19370617-19370636 Msa0319580:intron 30.0%
TTTGTCATGAAAGCAAATCT+GGG + chr2_4:19370885-19370904 None:intergenic 30.0%
AAGATTATGTGTATGTACCT+GGG + chr2_4:19370984-19371003 None:intergenic 30.0%
TAAGATTATGTGTATGTACC+TGG + chr2_4:19370985-19371004 None:intergenic 30.0%
ACTACTACACTGTTTATTGT+AGG + chr2_4:19371050-19371069 None:intergenic 30.0%
!! AGGCTTTGTTAAGAGATAAT+GGG - chr2_4:19371557-19371576 Msa0319580:CDS 30.0%
! ATATGAAGTTAACCTTTTGG+TGG - chr2_4:19371726-19371745 Msa0319580:CDS 30.0%
! CTCAAAAAAAAACCTTTTGG+TGG - chr2_4:19371753-19371772 Msa0319580:CDS 30.0%
CAAATCAATTAACCACCAAA+AGG + chr2_4:19371768-19371787 None:intergenic 30.0%
!! CTTTTGGTGGTTAATTGATT+TGG - chr2_4:19371766-19371785 Msa0319580:exon 30.0%
AGCATAAAAATCAATGGAGG+AGG - chr2_4:19369541-19369560 Msa0319580:three_prime_UTR 35.0%
! TGTGTTATTGTTGTTGATGG+TGG + chr2_4:19369651-19369670 None:intergenic 35.0%
GTTGAGATTGAAGGTTGAAA+AGG + chr2_4:19369683-19369702 None:intergenic 35.0%
!!! AGAAGATTTTTGGTCACAAG+AGG + chr2_4:19369729-19369748 None:intergenic 35.0%
TTATGGTTTCATGGACTTGT+TGG - chr2_4:19369751-19369770 Msa0319580:CDS 35.0%
! TATGGTTTCATGGACTTGTT+GGG - chr2_4:19369752-19369771 Msa0319580:CDS 35.0%
TTTACCTCTATGCTGTTCTA+AGG + chr2_4:19369984-19370003 None:intergenic 35.0%
!! TCTTAGTCTTGTCTTGATCT+TGG + chr2_4:19370042-19370061 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr2_4:19370451-19370470 Msa0319580:CDS 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr2_4:19370451-19370470 Msa0319580:CDS 35.0%
TTAGAGTTAAGGGAGTAGTT+TGG - chr2_4:19370586-19370605 Msa0319580:intron 35.0%
TAGAGTTAAGGGAGTAGTTT+GGG - chr2_4:19370587-19370606 Msa0319580:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr2_4:19370451-19370470 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr2_4:19370451-19370470 None:intergenic 35.0%
!!! TGGGTTCTCTTTCCTTTTTT+TGG + chr2_4:19370866-19370885 None:intergenic 35.0%
CTTTGTCATGAAAGCAAATC+TGG + chr2_4:19370886-19370905 None:intergenic 35.0%
! GAAGTTGATCACTTAGATGA+TGG - chr2_4:19370909-19370928 Msa0319580:intron 35.0%
! ATCACTTAGATGATGGCTAT+AGG - chr2_4:19370916-19370935 Msa0319580:intron 35.0%
!! GACTGTTTTTCACAGCTTTT+TGG + chr2_4:19370956-19370975 None:intergenic 35.0%
GACGACAATTGAAGAATCAT+CGG + chr2_4:19371230-19371249 None:intergenic 35.0%
ACCAACATAACTAGAAGAAG+GGG + chr2_4:19371437-19371456 None:intergenic 35.0%
CACCAACATAACTAGAAGAA+GGG + chr2_4:19371438-19371457 None:intergenic 35.0%
!! ATCTTCAGGGTTTGTTAATG+AGG - chr2_4:19371537-19371556 Msa0319580:CDS 35.0%
!! GAGGCTTTGTTAAGAGATAA+TGG - chr2_4:19371556-19371575 Msa0319580:CDS 35.0%
!! TTTTTGAGAGAACCACCAAA+AGG + chr2_4:19371741-19371760 None:intergenic 35.0%
AGCATAAAAATCAATGGAGG+AGG - chr2_4:19369541-19369560 Msa0319580:three_prime_UTR 35.0%
! TGTGTTATTGTTGTTGATGG+TGG + chr2_4:19369651-19369670 None:intergenic 35.0%
GTTGAGATTGAAGGTTGAAA+AGG + chr2_4:19369683-19369702 None:intergenic 35.0%
!!! AGAAGATTTTTGGTCACAAG+AGG + chr2_4:19369729-19369748 None:intergenic 35.0%
TTATGGTTTCATGGACTTGT+TGG - chr2_4:19369751-19369770 Msa0319580:CDS 35.0%
! TATGGTTTCATGGACTTGTT+GGG - chr2_4:19369752-19369771 Msa0319580:CDS 35.0%
TTTACCTCTATGCTGTTCTA+AGG + chr2_4:19369984-19370003 None:intergenic 35.0%
!! TCTTAGTCTTGTCTTGATCT+TGG + chr2_4:19370042-19370061 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr2_4:19370451-19370470 Msa0319580:CDS 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr2_4:19370451-19370470 Msa0319580:CDS 35.0%
TTAGAGTTAAGGGAGTAGTT+TGG - chr2_4:19370586-19370605 Msa0319580:intron 35.0%
TAGAGTTAAGGGAGTAGTTT+GGG - chr2_4:19370587-19370606 Msa0319580:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr2_4:19370451-19370470 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr2_4:19370451-19370470 None:intergenic 35.0%
!!! TGGGTTCTCTTTCCTTTTTT+TGG + chr2_4:19370866-19370885 None:intergenic 35.0%
CTTTGTCATGAAAGCAAATC+TGG + chr2_4:19370886-19370905 None:intergenic 35.0%
! GAAGTTGATCACTTAGATGA+TGG - chr2_4:19370909-19370928 Msa0319580:intron 35.0%
! ATCACTTAGATGATGGCTAT+AGG - chr2_4:19370916-19370935 Msa0319580:intron 35.0%
!! GACTGTTTTTCACAGCTTTT+TGG + chr2_4:19370956-19370975 None:intergenic 35.0%
GACGACAATTGAAGAATCAT+CGG + chr2_4:19371230-19371249 None:intergenic 35.0%
ACCAACATAACTAGAAGAAG+GGG + chr2_4:19371437-19371456 None:intergenic 35.0%
CACCAACATAACTAGAAGAA+GGG + chr2_4:19371438-19371457 None:intergenic 35.0%
!! ATCTTCAGGGTTTGTTAATG+AGG - chr2_4:19371537-19371556 Msa0319580:CDS 35.0%
!! GAGGCTTTGTTAAGAGATAA+TGG - chr2_4:19371556-19371575 Msa0319580:CDS 35.0%
!! TTTTTGAGAGAACCACCAAA+AGG + chr2_4:19371741-19371760 None:intergenic 35.0%
!! GTTATTGTTGTTGATGGTGG+TGG + chr2_4:19369648-19369667 None:intergenic 40.0%
! TTTTGGTCACAAGAGGAAGA+TGG + chr2_4:19369722-19369741 None:intergenic 40.0%
TTCAATACCTCGGATGAATC+CGG + chr2_4:19369896-19369915 None:intergenic 40.0%
TTCCTCGTCTAATGAAGCAA+CGG - chr2_4:19369949-19369968 Msa0319580:CDS 40.0%
AACACCTTAGAACAGCATAG+AGG - chr2_4:19369977-19369996 Msa0319580:CDS 40.0%
TTAAGAAAACGCGTGATGAG+TGG - chr2_4:19370140-19370159 Msa0319580:CDS 40.0%
ATAGCAACGACAAGAACAGA+AGG + chr2_4:19370223-19370242 None:intergenic 40.0%
! ACTTAGATGATGGCTATAGG+TGG - chr2_4:19370919-19370938 Msa0319580:intron 40.0%
! TGAAAAACAGTCCTTTTCCC+AGG - chr2_4:19370964-19370983 Msa0319580:intron 40.0%
ATGTGTATGTACCTGGGAAA+AGG + chr2_4:19370978-19370997 None:intergenic 40.0%
TGTGGGACACGTAAATGTAA+CGG - chr2_4:19371128-19371147 Msa0319580:intron 40.0%
! AACGGCGTTGAAACAAAAAC+AGG - chr2_4:19371146-19371165 Msa0319580:intron 40.0%
GAGCTACTATCGTTGTACAA+CGG - chr2_4:19371168-19371187 Msa0319580:intron 40.0%
AATTGTCGTCACTACTTACG+AGG - chr2_4:19371240-19371259 Msa0319580:intron 40.0%
ATTGTCGTCACTACTTACGA+GGG - chr2_4:19371241-19371260 Msa0319580:intron 40.0%
CCAACATAACTAGAAGAAGG+GGG + chr2_4:19371436-19371455 None:intergenic 40.0%
CCACCAACATAACTAGAAGA+AGG + chr2_4:19371439-19371458 None:intergenic 40.0%
! CCTTCTTCTAGTTATGTTGG+TGG - chr2_4:19371436-19371455 Msa0319580:CDS 40.0%
!! AGTTATGTTGGTGGTTCTAG+TGG - chr2_4:19371445-19371464 Msa0319580:CDS 40.0%
GTAGTTATGTTAACACGTCG+AGG - chr2_4:19371467-19371486 Msa0319580:CDS 40.0%
TATGTTAACACGTCGAGGTT+TGG - chr2_4:19371472-19371491 Msa0319580:CDS 40.0%
!!! GTGGTTTTGTGAATGACCAA+GGG - chr2_4:19371494-19371513 Msa0319580:CDS 40.0%
AACCTCGATGATTAATCCCT+TGG + chr2_4:19371513-19371532 None:intergenic 40.0%
! GGGATTAATCATCGAGGTTT+TGG - chr2_4:19371514-19371533 Msa0319580:CDS 40.0%
!!! ATCGAGGTTTTGGATCTTCA+GGG - chr2_4:19371524-19371543 Msa0319580:CDS 40.0%
!! GTTATTGTTGTTGATGGTGG+TGG + chr2_4:19369648-19369667 None:intergenic 40.0%
! TTTTGGTCACAAGAGGAAGA+TGG + chr2_4:19369722-19369741 None:intergenic 40.0%
TTCAATACCTCGGATGAATC+CGG + chr2_4:19369896-19369915 None:intergenic 40.0%
TTCCTCGTCTAATGAAGCAA+CGG - chr2_4:19369949-19369968 Msa0319580:CDS 40.0%
AACACCTTAGAACAGCATAG+AGG - chr2_4:19369977-19369996 Msa0319580:CDS 40.0%
TTAAGAAAACGCGTGATGAG+TGG - chr2_4:19370140-19370159 Msa0319580:CDS 40.0%
ATAGCAACGACAAGAACAGA+AGG + chr2_4:19370223-19370242 None:intergenic 40.0%
! ACTTAGATGATGGCTATAGG+TGG - chr2_4:19370919-19370938 Msa0319580:intron 40.0%
! TGAAAAACAGTCCTTTTCCC+AGG - chr2_4:19370964-19370983 Msa0319580:intron 40.0%
ATGTGTATGTACCTGGGAAA+AGG + chr2_4:19370978-19370997 None:intergenic 40.0%
TGTGGGACACGTAAATGTAA+CGG - chr2_4:19371128-19371147 Msa0319580:intron 40.0%
! AACGGCGTTGAAACAAAAAC+AGG - chr2_4:19371146-19371165 Msa0319580:intron 40.0%
GAGCTACTATCGTTGTACAA+CGG - chr2_4:19371168-19371187 Msa0319580:intron 40.0%
AATTGTCGTCACTACTTACG+AGG - chr2_4:19371240-19371259 Msa0319580:intron 40.0%
ATTGTCGTCACTACTTACGA+GGG - chr2_4:19371241-19371260 Msa0319580:intron 40.0%
CCAACATAACTAGAAGAAGG+GGG + chr2_4:19371436-19371455 None:intergenic 40.0%
CCACCAACATAACTAGAAGA+AGG + chr2_4:19371439-19371458 None:intergenic 40.0%
! CCTTCTTCTAGTTATGTTGG+TGG - chr2_4:19371436-19371455 Msa0319580:CDS 40.0%
!! AGTTATGTTGGTGGTTCTAG+TGG - chr2_4:19371445-19371464 Msa0319580:CDS 40.0%
GTAGTTATGTTAACACGTCG+AGG - chr2_4:19371467-19371486 Msa0319580:CDS 40.0%
TATGTTAACACGTCGAGGTT+TGG - chr2_4:19371472-19371491 Msa0319580:CDS 40.0%
!!! GTGGTTTTGTGAATGACCAA+GGG - chr2_4:19371494-19371513 Msa0319580:CDS 40.0%
AACCTCGATGATTAATCCCT+TGG + chr2_4:19371513-19371532 None:intergenic 40.0%
! GGGATTAATCATCGAGGTTT+TGG - chr2_4:19371514-19371533 Msa0319580:CDS 40.0%
!!! ATCGAGGTTTTGGATCTTCA+GGG - chr2_4:19371524-19371543 Msa0319580:CDS 40.0%
AATCTCATCGGAGAATGCCA+TGG + chr2_4:19369618-19369637 None:intergenic 45.0%
GGTGGTTGTTGGAATCTCAT+CGG + chr2_4:19369630-19369649 None:intergenic 45.0%
!! TTGTTGATGGTGGTGGTTGT+TGG + chr2_4:19369641-19369660 None:intergenic 45.0%
! TGTTGTTGTTGTCGTCGTGA+CGG + chr2_4:19369834-19369853 None:intergenic 45.0%
TCAATACCTCGGATGAATCC+GGG + chr2_4:19369895-19369914 None:intergenic 45.0%
!! ATCCGAGGTATTGAACACTC+CGG - chr2_4:19369901-19369920 Msa0319580:CDS 45.0%
! GAACAAGAATTCGGTGACAC+CGG + chr2_4:19369923-19369942 None:intergenic 45.0%
AACCGTTGCTTCATTAGACG+AGG + chr2_4:19369954-19369973 None:intergenic 45.0%
GGCTATAGGTGGCGTAAATA+TGG - chr2_4:19370930-19370949 Msa0319580:intron 45.0%
! GTTCACCAACCTACTAGCTT+CGG - chr2_4:19371313-19371332 Msa0319580:CDS 45.0%
! CCCCCTTCTTCTAGTTATGT+TGG - chr2_4:19371433-19371452 Msa0319580:CDS 45.0%
!!! GGTGGTTTTGTGAATGACCA+AGG - chr2_4:19371493-19371512 Msa0319580:CDS 45.0%
GACCAAGGGATTAATCATCG+AGG - chr2_4:19371508-19371527 Msa0319580:CDS 45.0%
!!! CATCGAGGTTTTGGATCTTC+AGG - chr2_4:19371523-19371542 Msa0319580:CDS 45.0%
AATCTCATCGGAGAATGCCA+TGG + chr2_4:19369618-19369637 None:intergenic 45.0%
GGTGGTTGTTGGAATCTCAT+CGG + chr2_4:19369630-19369649 None:intergenic 45.0%
!! TTGTTGATGGTGGTGGTTGT+TGG + chr2_4:19369641-19369660 None:intergenic 45.0%
! TGTTGTTGTTGTCGTCGTGA+CGG + chr2_4:19369834-19369853 None:intergenic 45.0%
TCAATACCTCGGATGAATCC+GGG + chr2_4:19369895-19369914 None:intergenic 45.0%
!! ATCCGAGGTATTGAACACTC+CGG - chr2_4:19369901-19369920 Msa0319580:CDS 45.0%
! GAACAAGAATTCGGTGACAC+CGG + chr2_4:19369923-19369942 None:intergenic 45.0%
AACCGTTGCTTCATTAGACG+AGG + chr2_4:19369954-19369973 None:intergenic 45.0%
GGCTATAGGTGGCGTAAATA+TGG - chr2_4:19370930-19370949 Msa0319580:intron 45.0%
! GTTCACCAACCTACTAGCTT+CGG - chr2_4:19371313-19371332 Msa0319580:CDS 45.0%
! CCCCCTTCTTCTAGTTATGT+TGG - chr2_4:19371433-19371452 Msa0319580:CDS 45.0%
!!! GGTGGTTTTGTGAATGACCA+AGG - chr2_4:19371493-19371512 Msa0319580:CDS 45.0%
GACCAAGGGATTAATCATCG+AGG - chr2_4:19371508-19371527 Msa0319580:CDS 45.0%
!!! CATCGAGGTTTTGGATCTTC+AGG - chr2_4:19371523-19371542 Msa0319580:CDS 45.0%
!!! TTTTTAAAATTATTAATTCA+TGG + chr2_4:19370079-19370098 None:intergenic 5.0%
!! TAAAAAAATTGAATTATTAT+AGG + chr2_4:19370751-19370770 None:intergenic 5.0%
!!! TTTTTAAAATTATTAATTCA+TGG + chr2_4:19370079-19370098 None:intergenic 5.0%
!! TAAAAAAATTGAATTATTAT+AGG + chr2_4:19370751-19370770 None:intergenic 5.0%
AATGGAGGAGGAGAAGAGAG+AGG - chr2_4:19369553-19369572 Msa0319580:three_prime_UTR 50.0%
!! TGGTGGATGATGAGTTGGTG+GGG + chr2_4:19369589-19369608 None:intergenic 50.0%
!! GTGGTGGATGATGAGTTGGT+GGG + chr2_4:19369590-19369609 None:intergenic 50.0%
GTCACAAGAGGAAGATGGCA+TGG + chr2_4:19369717-19369736 None:intergenic 50.0%
! CGGTGACGAAAGAGTGTGAT+GGG + chr2_4:19369858-19369877 None:intergenic 50.0%
CCATCACACTCTTTCGTCAC+CGG - chr2_4:19369856-19369875 Msa0319580:CDS 50.0%
! ACCGGTGAGTTCTAACATCC+CGG - chr2_4:19369874-19369893 Msa0319580:CDS 50.0%
TCCGGGATGTTAGAACTCAC+CGG + chr2_4:19369878-19369897 None:intergenic 50.0%
TAACATCCCGGATTCATCCG+AGG - chr2_4:19369886-19369905 Msa0319580:CDS 50.0%
! CACCGGAGTGTTCAATACCT+CGG + chr2_4:19369906-19369925 None:intergenic 50.0%
CGTTGTACAACGGCAAGTTG+CGG - chr2_4:19371178-19371197 Msa0319580:intron 50.0%
TGGTGAACCAAGCTGAGGTT+AGG + chr2_4:19371301-19371320 None:intergenic 50.0%
!! TAGGTTGGTGAACCAAGCTG+AGG + chr2_4:19371306-19371325 None:intergenic 50.0%
GTTAACACGTCGAGGTTTGG+TGG - chr2_4:19371475-19371494 Msa0319580:CDS 50.0%
AATGGAGGAGGAGAAGAGAG+AGG - chr2_4:19369553-19369572 Msa0319580:three_prime_UTR 50.0%
!! TGGTGGATGATGAGTTGGTG+GGG + chr2_4:19369589-19369608 None:intergenic 50.0%
!! GTGGTGGATGATGAGTTGGT+GGG + chr2_4:19369590-19369609 None:intergenic 50.0%
GTCACAAGAGGAAGATGGCA+TGG + chr2_4:19369717-19369736 None:intergenic 50.0%
! CGGTGACGAAAGAGTGTGAT+GGG + chr2_4:19369858-19369877 None:intergenic 50.0%
CCATCACACTCTTTCGTCAC+CGG - chr2_4:19369856-19369875 Msa0319580:CDS 50.0%
! ACCGGTGAGTTCTAACATCC+CGG - chr2_4:19369874-19369893 Msa0319580:CDS 50.0%
TCCGGGATGTTAGAACTCAC+CGG + chr2_4:19369878-19369897 None:intergenic 50.0%
TAACATCCCGGATTCATCCG+AGG - chr2_4:19369886-19369905 Msa0319580:CDS 50.0%
! CACCGGAGTGTTCAATACCT+CGG + chr2_4:19369906-19369925 None:intergenic 50.0%
CGTTGTACAACGGCAAGTTG+CGG - chr2_4:19371178-19371197 Msa0319580:intron 50.0%
TGGTGAACCAAGCTGAGGTT+AGG + chr2_4:19371301-19371320 None:intergenic 50.0%
!! TAGGTTGGTGAACCAAGCTG+AGG + chr2_4:19371306-19371325 None:intergenic 50.0%
GTTAACACGTCGAGGTTTGG+TGG - chr2_4:19371475-19371494 Msa0319580:CDS 50.0%
!! GGTGGTGGATGATGAGTTGG+TGG + chr2_4:19369591-19369610 None:intergenic 55.0%
!! GGTGGTGGTGGATGATGAGT+TGG + chr2_4:19369594-19369613 None:intergenic 55.0%
ATCATCCACCACCACCACCA+TGG - chr2_4:19369598-19369617 Msa0319580:three_prime_UTR 55.0%
ATCGGAGAATGCCATGGTGG+TGG + chr2_4:19369612-19369631 None:intergenic 55.0%
CTCATCGGAGAATGCCATGG+TGG + chr2_4:19369615-19369634 None:intergenic 55.0%
GTTGTTGTCGTCGTGACGGT+GGG + chr2_4:19369830-19369849 None:intergenic 55.0%
TGTTGTTGTCGTCGTGACGG+TGG + chr2_4:19369831-19369850 None:intergenic 55.0%
! CCGGTGACGAAAGAGTGTGA+TGG + chr2_4:19369859-19369878 None:intergenic 55.0%
GTCACGTCCTAACCTCAGCT+TGG - chr2_4:19371291-19371310 Msa0319580:CDS 55.0%
! CAGCACCGAAGCTAGTAGGT+TGG + chr2_4:19371321-19371340 None:intergenic 55.0%
!! TAGCTTCGGTGCTGCTGCTT+CGG - chr2_4:19371327-19371346 Msa0319580:CDS 55.0%
!! GGTGGTGGATGATGAGTTGG+TGG + chr2_4:19369591-19369610 None:intergenic 55.0%
!! GGTGGTGGTGGATGATGAGT+TGG + chr2_4:19369594-19369613 None:intergenic 55.0%
ATCATCCACCACCACCACCA+TGG - chr2_4:19369598-19369617 Msa0319580:three_prime_UTR 55.0%
ATCGGAGAATGCCATGGTGG+TGG + chr2_4:19369612-19369631 None:intergenic 55.0%
CTCATCGGAGAATGCCATGG+TGG + chr2_4:19369615-19369634 None:intergenic 55.0%
GTTGTTGTCGTCGTGACGGT+GGG + chr2_4:19369830-19369849 None:intergenic 55.0%
TGTTGTTGTCGTCGTGACGG+TGG + chr2_4:19369831-19369850 None:intergenic 55.0%
! CCGGTGACGAAAGAGTGTGA+TGG + chr2_4:19369859-19369878 None:intergenic 55.0%
GTCACGTCCTAACCTCAGCT+TGG - chr2_4:19371291-19371310 Msa0319580:CDS 55.0%
! CAGCACCGAAGCTAGTAGGT+TGG + chr2_4:19371321-19371340 None:intergenic 55.0%
!! TAGCTTCGGTGCTGCTGCTT+CGG - chr2_4:19371327-19371346 Msa0319580:CDS 55.0%
!! GAATGCCATGGTGGTGGTGG+TGG + chr2_4:19369606-19369625 None:intergenic 60.0%
!! GGAGAATGCCATGGTGGTGG+TGG + chr2_4:19369609-19369628 None:intergenic 60.0%
! TTGCGGCGTGAAAAAGCGCG+TGG - chr2_4:19371195-19371214 Msa0319580:intron 60.0%
AGGTTAGGACGTGACGTGGC+AGG + chr2_4:19371286-19371305 None:intergenic 60.0%
GCTGAGGTTAGGACGTGACG+TGG + chr2_4:19371290-19371309 None:intergenic 60.0%
! GCAGCAGCACCGAAGCTAGT+AGG + chr2_4:19371325-19371344 None:intergenic 60.0%
!! AGCTTCGGTGCTGCTGCTTC+GGG - chr2_4:19371328-19371347 Msa0319580:CDS 60.0%
!! GAATGCCATGGTGGTGGTGG+TGG + chr2_4:19369606-19369625 None:intergenic 60.0%
!! GGAGAATGCCATGGTGGTGG+TGG + chr2_4:19369609-19369628 None:intergenic 60.0%
! TTGCGGCGTGAAAAAGCGCG+TGG - chr2_4:19371195-19371214 Msa0319580:intron 60.0%
AGGTTAGGACGTGACGTGGC+AGG + chr2_4:19371286-19371305 None:intergenic 60.0%
GCTGAGGTTAGGACGTGACG+TGG + chr2_4:19371290-19371309 None:intergenic 60.0%
! GCAGCAGCACCGAAGCTAGT+AGG + chr2_4:19371325-19371344 None:intergenic 60.0%
!! AGCTTCGGTGCTGCTGCTTC+GGG - chr2_4:19371328-19371347 Msa0319580:CDS 60.0%
GGACGTGACGTGGCAGGAGA+AGG + chr2_4:19371280-19371299 None:intergenic 65.0%
GGACGTGACGTGGCAGGAGA+AGG + chr2_4:19371280-19371299 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 19369448 19371879 19369448 ID=Msa0319580;Name=Msa0319580
chr2_4 mRNA 19369448 19371879 19369448 ID=Msa0319580-mRNA-1;Parent=Msa0319580;Name=Msa0319580-mRNA-1;_AED=0.01;_eAED=0.01;_QI=106|1|1|1|1|1|3|237|376
chr2_4 exon 19369448 19370159 19369448 ID=Msa0319580-mRNA-1:exon:7150;Parent=Msa0319580-mRNA-1
chr2_4 exon 19370342 19370485 19370342 ID=Msa0319580-mRNA-1:exon:7149;Parent=Msa0319580-mRNA-1
chr2_4 exon 19371262 19371879 19371262 ID=Msa0319580-mRNA-1:exon:7148;Parent=Msa0319580-mRNA-1
chr2_4 five_prime_UTR 19371774 19371879 19371774 ID=Msa0319580-mRNA-1:five_prime_utr;Parent=Msa0319580-mRNA-1
chr2_4 CDS 19371262 19371773 19371262 ID=Msa0319580-mRNA-1:cds;Parent=Msa0319580-mRNA-1
chr2_4 CDS 19370342 19370485 19370342 ID=Msa0319580-mRNA-1:cds;Parent=Msa0319580-mRNA-1
chr2_4 CDS 19369685 19370159 19369685 ID=Msa0319580-mRNA-1:cds;Parent=Msa0319580-mRNA-1
chr2_4 three_prime_UTR 19369448 19369684 19369448 ID=Msa0319580-mRNA-1:three_prime_utr;Parent=Msa0319580-mRNA-1
Gene Sequence

>Msa0319580

ATGGAGGAGGAGAAGAGAGAGGAGCACACAAACCCCACCAACTCATCATCCACCACCACCACCATGGCATTCTCCGATGAGATTCCAACAACCACCACCATCAACAACAATAACACATCTTTATTCCCTTTTCAACCTTCAATCTCAACTTTTTTTGACACCATGCCATCTTCCTCTTGTGACCAAAAATCTTCTTCTTATGGTTTCATGGACTTGTTGGGTTCCCATGATTACATCAACAACAACAACACTTTTTTATTATCGGATTGGGTTCCCACCGTCACGACGACAACAACAACAACCCATCACACTCTTTCGTCACCGGTGAGTTCTAACATCCCGGATTCATCCGAGGTATTGAACACTCCGGTGTCACCGAATTCTTGTTCGATTTCTTCCTCGTCTAATGAAGCAACGGTTAACAACACCTTAGAACAGCATAGAGGTAAACTTTCAAAAAATGAAGCAGAGTTAGAAGGAGATGACCAAGATCAAGACAAGACTAAGAAACAATTGAAACCAAAGAAAAAGAACCAAAAAAAGGAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCACTTAGATGATGGCTATAGGTGGCGTAAATATGGCCAAAAAGCTGTGAAAAACAGTCCTTTTCCCAGGAGCTACTATCGTTGTACAACGGCAAGTTGCGGCGTGAAAAAGCGCGTGGAGCGTTCTTCCGATGATTCTTCAATTGTCGTCACTACTTACGAGGGTCAACATACACATCCTTCTCCTGCCACGTCACGTCCTAACCTCAGCTTGGTTCACCAACCTACTAGCTTCGGTGCTGCTGCTTCGGGTTCACACTCACACTTTCTTCTACCAACATTGTTGTACAATAATAACAACTCCATTAGTAATAATATTACTACTACTACTACACCCCCTTCTTCTAGTTATGTTGGTGGTTCTAGTGGTAGTTATGTTAACACGTCGAGGTTTGGTGGTTTTGTGAATGACCAAGGGATTAATCATCGAGGTTTTGGATCTTCAGGGTTTGTTAATGAGGCTTTGTTAAGAGATAATGGGTTGCTTCAAGATATTATTCAGATGAAAAAACAAGAAAAAGATTCAAGAAAAGAACAACATTAA
Protein sequence

>Msa0319580

MEEEKREEHTNPTNSSSTTTTMAFSDEIPTTTTINNNNTSLFPFQPSISTFFDTMPSSSCDQKSSSYGFMDLLGSHDYINNNNTFLLSDWVPTVTTTTTTTHHTLSSPVSSNIPDSSEVLNTPVSPNSCSISSSSNEATVNNTLEQHRGKLSKNEAELEGDDQDQDKTKKQLKPKKKNQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTASCGVKKRVERSSDDSSIVVTTYEGQHTHPSPATSRPNLSLVHQPTSFGAAASGSHSHFLLPTLLYNNNNSISNNITTTTTPPSSSYVGGSSGSYVNTSRFGGFVNDQGINHRGFGSSGFVNEALLRDNGLLQDIIQMKKQEKDSRKEQH*