AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0324420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0324420 MtrunA17_Chr7g0274481 94.444 720 39 1 4 723 8 726 0.0 1315
Msa0324420 MtrunA17_Chr5g0397691 92.962 611 35 3 1 607 1 607 0.0 1062
Msa0324420 MtrunA17_Chr5g0397681 89.796 49 5 0 626 674 1 49 3.77e-24 95.9
Msa0324420 MtrunA17_Chr7g0238631 38.095 105 64 1 4 107 62 166 3.93e-15 79.0
Msa0324420 MtrunA17_Chr7g0238631 31.008 129 78 2 4 132 114 231 4.08e-11 66.2
Msa0324420 MtrunA17_Chr8g0362231 34.021 97 64 0 3 99 22 118 4.60e-13 72.0
Msa0324420 MtrunA17_Chr3g0139671 34.286 105 68 1 4 107 34 138 7.41e-13 72.4
Msa0324420 MtrunA17_Chr3g0139671 36.471 85 54 0 4 88 86 170 2.63e-12 70.5
Msa0324420 MtrunA17_Chr5g0416341 33.945 109 68 1 3 111 26 130 1.08e-12 70.9
Msa0324420 MtrunA17_Chr1g0157731 34.343 99 64 1 4 101 40 138 1.09e-12 71.6
Msa0324420 MtrunA17_Chr4g0058991 37.647 85 53 0 4 88 210 294 2.66e-11 66.6
Msa0324420 MtrunA17_Chr5g0397841 37.349 83 52 0 6 88 113 195 4.55e-11 65.9
Msa0324420 MtrunA17_Chr6g0480581 35.632 87 56 0 2 88 3 89 5.90e-11 63.5
Msa0324420 MtrunA17_Chr6g0460661 34.783 92 60 0 6 97 19 110 6.00e-11 61.6
Msa0324420 MtrunA17_Chr6g0460671 31.959 97 66 0 4 100 100 196 6.75e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0324420 AT1G09770.1 75.346 722 172 4 4 722 8 726 0.0 1047
Msa0324420 AT5G02320.1 37.143 105 65 1 4 107 76 180 1.63e-14 77.4
Msa0324420 AT5G02320.1 34.118 85 56 0 4 88 128 212 8.45e-11 65.9
Msa0324420 AT5G02320.2 37.143 105 65 1 4 107 76 180 1.63e-14 77.4
Msa0324420 AT5G02320.2 34.118 85 56 0 4 88 128 212 8.45e-11 65.9
Msa0324420 AT5G02320.3 37.143 105 65 1 4 107 16 120 1.84e-14 77.0
Msa0324420 AT3G18100.1 34.375 96 63 0 4 99 547 642 6.08e-14 76.3
Msa0324420 AT3G18100.1 36.082 97 60 2 6 101 498 593 2.29e-11 67.8
Msa0324420 AT3G18100.3 34.375 96 63 0 4 99 499 594 9.92e-14 75.5
Msa0324420 AT3G18100.3 36.082 97 60 2 6 101 450 545 3.72e-11 67.0
Msa0324420 AT3G09370.2 36.190 105 66 1 4 107 84 188 1.20e-13 74.7
Msa0324420 AT3G18100.4 34.375 96 63 0 4 99 386 481 1.24e-13 75.1
Msa0324420 AT3G18100.4 36.082 97 60 2 6 101 337 432 4.94e-11 66.6
Msa0324420 AT3G09370.1 36.190 105 66 1 4 107 79 183 1.29e-13 74.3
Msa0324420 AT5G11510.3 37.374 99 61 1 4 101 30 128 1.31e-13 75.1
Msa0324420 AT5G11510.1 37.374 99 61 1 4 101 30 128 1.31e-13 75.1
Msa0324420 AT5G11510.4 37.374 99 61 1 4 101 30 128 1.31e-13 75.1
Msa0324420 AT3G18100.2 34.375 96 63 0 4 99 334 429 1.59e-13 74.7
Msa0324420 AT3G18100.2 36.082 97 60 2 6 101 285 380 6.44e-11 66.2
Msa0324420 AT3G09370.3 36.190 105 66 1 4 107 92 196 1.62e-13 74.3
Msa0324420 AT5G11510.2 37.374 99 61 1 4 101 30 128 2.22e-13 74.3
Msa0324420 AT5G11510.5 37.374 99 61 1 4 101 30 128 2.50e-13 74.3
Msa0324420 AT4G18770.1 38.824 85 52 0 4 88 218 302 8.85e-13 71.6
Msa0324420 AT4G32730.5 35.354 99 63 1 4 101 36 134 1.39e-12 72.0
Msa0324420 AT4G32730.4 35.354 99 63 1 4 101 36 134 1.39e-12 72.0
Msa0324420 AT4G32730.3 35.354 99 63 1 4 101 36 134 1.39e-12 72.0
Msa0324420 AT4G32730.2 35.354 99 63 1 4 101 36 134 1.39e-12 72.0
Msa0324420 AT4G32730.1 35.354 99 63 1 4 101 36 134 2.32e-12 70.9
Msa0324420 AT4G33450.1 32.990 97 65 0 4 100 20 116 5.22e-12 67.0
Msa0324420 AT2G02820.2 30.579 121 70 1 3 109 30 150 8.45e-12 68.6
Msa0324420 AT2G02820.1 30.579 121 70 1 3 109 30 150 1.14e-11 68.2
Msa0324420 AT4G00540.2 37.500 112 61 2 4 106 47 158 1.33e-11 67.8
Msa0324420 AT4G00540.1 37.500 112 61 2 4 106 45 156 1.77e-11 67.4
Msa0324420 AT1G14350.2 31.959 97 66 0 3 99 25 121 2.34e-11 67.0
Msa0324420 AT1G14350.1 31.959 97 66 0 3 99 25 121 2.34e-11 67.0
Msa0324420 AT2G02820.3 30.579 121 70 1 3 109 30 150 2.47e-11 66.2
Msa0324420 AT5G40360.1 35.294 85 55 0 4 88 159 243 2.68e-11 66.2
Msa0324420 AT5G17800.1 34.343 99 65 0 2 100 92 190 3.89e-11 65.5
Msa0324420 AT1G17950.1 31.313 99 68 0 2 100 4 102 4.35e-11 64.3
Msa0324420 AT4G38620.1 31.655 139 84 5 4 138 15 146 5.96e-11 64.3

Find 235 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTCTTTCCAACTGTTTC+TGG 0.013419 2_4:+29971083 None:intergenic
CTGTTGCAATTGTTGATTTA+TGG 0.112818 2_4:-29968907 Msa0324420:three_prime_UTR
TTCTGGGTCATTCAGCTTCT+TGG 0.153986 2_4:+29971100 None:intergenic
TTTCTTTCAATTATTGTTAA+TGG 0.166886 2_4:-29969047 Msa0324420:three_prime_UTR
CCAAACACCTATGCTCATTT+TGG 0.198162 2_4:+29971934 None:intergenic
TGCCAGCGCCATACTACTTC+TGG 0.213379 2_4:+29970668 None:intergenic
ATTTCATAACAGCAGCTTTC+AGG 0.225007 2_4:+29971891 None:intergenic
CAGCATCTCTGGAGCTTATT+AGG 0.228626 2_4:-29970299 Msa0324420:CDS
GGAGTAAGGCCTGCACTTCC+AGG 0.240853 2_4:+29970690 None:intergenic
TTGGGTGTCTGTGGATAATT+AGG 0.241982 2_4:+29970930 None:intergenic
CATGATGGAAGCTGAAAATT+TGG 0.248037 2_4:-29970847 Msa0324420:CDS
AAAGGAGCTTCCAGCCTTAC+TGG 0.273790 2_4:-29970196 Msa0324420:CDS
GTTCTCTGAGGAGTTCTTAA+AGG 0.283026 2_4:+29970894 None:intergenic
AAAGCTGCTGTTATGAAATA+TGG 0.287568 2_4:-29971887 Msa0324420:CDS
GAATTGGTTGCATCACTATC+TGG 0.302904 2_4:+29970469 None:intergenic
GGTCGCGCAGGCTTCGATTC+AGG 0.310060 2_4:+29971548 None:intergenic
AGTCCACTCAGTCTTCTTAA+TGG 0.314486 2_4:+29971775 None:intergenic
GTTTGAGAAAAGGCCTCCTT+TGG 0.314999 2_4:-29971297 Msa0324420:CDS
CCCTGTCATAGAAGATTATC+AGG 0.315605 2_4:-29970085 Msa0324420:CDS
ATGGATCTCAACTAATTAGT+AGG 0.316459 2_4:-29968888 Msa0324420:three_prime_UTR
CCATTGCCTCACGAAGATAC+TGG 0.317289 2_4:+29969356 None:intergenic
TGGGGTCACTCCTAAGAAAA+AGG 0.319124 2_4:-29970754 Msa0324420:CDS
ATCTCTTTCCAACTGTTTCT+GGG 0.330928 2_4:+29971084 None:intergenic
TCTTCAGCATCTTCTTGAAT+TGG 0.331097 2_4:+29970453 None:intergenic
ATCTCGTCGGCTTGCTCAAT+AGG 0.342238 2_4:+29970225 None:intergenic
TCAAGTTCTTCTATAGTAGT+AGG 0.344179 2_4:+29971224 None:intergenic
ACCGTGAAACCAAACCAAAA+AGG 0.346080 2_4:-29972556 None:intergenic
TAGGCCTCCTCCAGCATCTC+TGG 0.367513 2_4:-29970310 Msa0324420:CDS
TTTGTAGTTGTCTAGTTCCT+TGG 0.368196 2_4:-29969019 Msa0324420:three_prime_UTR
CAGAAATTCCGTTTGAGAAA+AGG 0.368252 2_4:-29971307 Msa0324420:CDS
GCTTGAGGAGATAGCAAATA+AGG 0.373696 2_4:-29970151 Msa0324420:CDS
CCTTGACGCCACTTGTGTTA+AGG 0.386161 2_4:-29971633 Msa0324420:CDS
TCTCGTCGGCTTGCTCAATA+GGG 0.387795 2_4:+29970226 None:intergenic
AGGCCCATTTGCTGCTCGTT+TGG 0.388358 2_4:+29970113 None:intergenic
TCAGATTTCCGATCAAGAAT+TGG 0.389053 2_4:-29971039 Msa0324420:CDS
GCAGGCTTCGATTCAGGATT+CGG 0.393602 2_4:+29971554 None:intergenic
TATTACAAAACCAACTTTGA+AGG 0.393656 2_4:+29968956 None:intergenic
TTGTATTCCTCTCACGAAAC+AGG 0.394842 2_4:+29971968 None:intergenic
CCAAAATGAGCATAGGTGTT+TGG 0.397192 2_4:-29971934 Msa0324420:exon
CTACGAAGGGAACTCCTCTC+AGG 0.399722 2_4:-29970620 Msa0324420:CDS
GGAATTGCATTTCATTATTG+TGG 0.401293 2_4:-29968842 Msa0324420:three_prime_UTR
CCTTACTCCCAGAAGTAGTA+TGG 0.406445 2_4:-29970676 Msa0324420:CDS
AGGCTGCTGGGATTGATATA+AGG 0.409355 2_4:-29971367 Msa0324420:CDS
TCTGCAACCCCTGGAAGTGC+AGG 0.411721 2_4:-29970699 Msa0324420:CDS
AGAGATGCTGGAGGAGGCCT+AGG 0.415805 2_4:+29970312 None:intergenic
CATGGTCTATCAAGTGTTGC+TGG 0.417267 2_4:-29969247 Msa0324420:CDS
GGATCCAAACGAGCAGCAAA+TGG 0.417377 2_4:-29970117 Msa0324420:CDS
TTGATAGACCATGTGTGTTA+CGG 0.418408 2_4:+29969257 None:intergenic
GCTACATATCAATGAAGATA+TGG 0.420115 2_4:-29970592 Msa0324420:CDS
TAAGGCAGCGGAGGAGGAAA+AGG 0.424744 2_4:-29971349 Msa0324420:CDS
CCATACTACTTCTGGGAGTA+AGG 0.426105 2_4:+29970676 None:intergenic
TGATAGACCATGTGTGTTAC+GGG 0.426495 2_4:+29969258 None:intergenic
TTGGATGAAATTGCCAAGTT+GGG 0.429250 2_4:-29971020 Msa0324420:CDS
AGCTTTCAGGATTTCATCCT+CGG 0.436489 2_4:+29971904 None:intergenic
CAGTATCTTCGTGAGGCAAT+GGG 0.437430 2_4:-29969355 Msa0324420:CDS
ATTGGATGAAATTGCCAAGT+TGG 0.444138 2_4:-29971021 Msa0324420:CDS
AAGAACTTGAGGGGAAAAGA+AGG 0.444403 2_4:-29971211 Msa0324420:CDS
GCCAGCGCCATACTACTTCT+GGG 0.445237 2_4:+29970669 None:intergenic
GCAAATAAGGAGAGAGAGAA+AGG 0.446065 2_4:-29970138 Msa0324420:CDS
CTAATAAGCTCCAGAGATGC+TGG 0.447893 2_4:+29970300 None:intergenic
ATCCTCTTCAATCTTCTCCT+CGG 0.449369 2_4:+29970428 None:intergenic
GAGGGAGTCAGCAGTGGGAT+TGG 0.449422 2_4:+29970720 None:intergenic
AAGAGAGAATTGAAGGCTGC+TGG 0.451049 2_4:-29971380 Msa0324420:CDS
TCCTGATAATCTTCTATGAC+AGG 0.451422 2_4:+29970084 None:intergenic
TCATACTCATCCATATCAAC+AGG 0.454291 2_4:+29971521 None:intergenic
ACCCACAATGGTATCACTAA+TGG 0.455710 2_4:+29971694 None:intergenic
AGAAGAAGAGGCACGGCAGA+AGG 0.457675 2_4:-29970376 Msa0324420:CDS
TCCCCTGGACGCAATTTCCT+AGG 0.458724 2_4:+29971584 None:intergenic
AAAGGAGTCAAGGCTTGGTT+GGG 0.461730 2_4:+29970912 None:intergenic
TGCAGAGAGGCAAGATGCCC+CGG 0.470266 2_4:-29971138 Msa0324420:CDS
GAATTGCATTTCATTATTGT+GGG 0.471151 2_4:-29968841 Msa0324420:three_prime_UTR
GAGTCTCAGACACCACTGTT+AGG 0.471291 2_4:-29970813 Msa0324420:CDS
CTGAAAATTTGGCCAGGCTG+AGG 0.471566 2_4:-29970836 Msa0324420:CDS
TTCTTAAAGGAGTCAAGGCT+TGG 0.471836 2_4:+29970907 None:intergenic
AATCTGAAGGATGCAACTCC+AGG 0.473048 2_4:+29970781 None:intergenic
GTCTAAATGCCCTTCAAAGT+TGG 0.473158 2_4:-29968966 Msa0324420:three_prime_UTR
TGGCATGCAGAATAGCAGCC+GGG 0.473211 2_4:+29971120 None:intergenic
TTGATATAAGGCAGCGGAGG+AGG 0.474103 2_4:-29971355 Msa0324420:CDS
AGCCAACCGAGCACATGCTT+CGG 0.476372 2_4:+29971484 None:intergenic
TGATGTTGCTGATGAGGATA+GGG 0.479449 2_4:-29971267 Msa0324420:CDS
AATTTCATCCAATTCTTGAT+CGG 0.479560 2_4:+29971031 None:intergenic
TCTCACGAAACAGGTTGAAC+CGG 0.479981 2_4:+29971977 None:intergenic
GCGACCCGATCCTGTTGATA+TGG 0.481942 2_4:-29971531 Msa0324420:CDS
CCAGTATCTTCGTGAGGCAA+TGG 0.484875 2_4:-29969356 Msa0324420:CDS
TGTCTGAGACTCCCTCAGCC+TGG 0.484905 2_4:+29970824 None:intergenic
AACGATCAAAAGTCATTCAA+AGG 0.485643 2_4:-29970341 Msa0324420:CDS
ATTACAAAACCAACTTTGAA+GGG 0.488031 2_4:+29968957 None:intergenic
TCCTCTTCAATCTTCTCCTC+GGG 0.488427 2_4:+29970429 None:intergenic
GAGTAAGGCCTGCACTTCCA+GGG 0.490905 2_4:+29970691 None:intergenic
CTCCTTTCTTATCATCTCGT+CGG 0.493278 2_4:+29970212 None:intergenic
TCATTCAAAGGGAACTTCCT+AGG 0.493709 2_4:-29970329 Msa0324420:CDS
TGCACTTCCAGGGGTTGCAG+AGG 0.493979 2_4:+29970701 None:intergenic
ACGAGTAGCACTGCTGCCTT+CGG 0.495690 2_4:+29970962 None:intergenic
CTGACTCCCTCTGCAACCCC+TGG 0.496434 2_4:-29970708 Msa0324420:CDS
TTCCGAAGCATGTGCTCGGT+TGG 0.496711 2_4:-29971486 Msa0324420:CDS
TCTTCTATGACAGGGATAGC+AGG 0.496725 2_4:+29970093 None:intergenic
GTCTCCGTCAGCTCTTATCA+AGG 0.499862 2_4:+29970272 None:intergenic
TTGTCATGCTCCAGTAAGGC+TGG 0.499885 2_4:+29970186 None:intergenic
AGGAGATCATGTAGATCTGT+TGG 0.501729 2_4:-29968863 Msa0324420:three_prime_UTR
TGCTTTCCGAAGCATGTGCT+CGG 0.502006 2_4:-29971490 Msa0324420:CDS
GTGAGAAGTAAGCTGGATGA+TGG 0.502979 2_4:-29969181 Msa0324420:CDS
CTCATCCATATCAACAGGAT+CGG 0.503902 2_4:+29971526 None:intergenic
AAGTAAGCTGGATGATGGGA+AGG 0.506469 2_4:-29969176 Msa0324420:CDS
ATAGCATCTCCTTTACTAGC+TGG 0.506651 2_4:+29970870 None:intergenic
AGAGGATATGTCTGATAGAA+TGG 0.507303 2_4:-29970412 Msa0324420:CDS
AGCTCCAGAGATGCTGGAGG+AGG 0.508047 2_4:+29970306 None:intergenic
GATGATTCGACTTGAGAAGA+AGG 0.511403 2_4:-29969149 Msa0324420:CDS
TGATAGAATGGCTAGAGAAA+AGG 0.511992 2_4:-29970400 Msa0324420:CDS
ATTGCTGCCCACAAGGTCAC+TGG 0.512710 2_4:+29970992 None:intergenic
TTGGCATGCAGAATAGCAGC+CGG 0.514383 2_4:+29971119 None:intergenic
TTTGAGAAAAGGCCTCCTTT+GGG 0.515050 2_4:-29971296 Msa0324420:CDS
CAGAGAACACCAGCTAGTAA+AGG 0.515217 2_4:-29970879 Msa0324420:CDS
GTTGCAGAGGGAGTCAGCAG+TGG 0.516056 2_4:+29970714 None:intergenic
GAAGTAGTATGGCGCTGGCA+AGG 0.516097 2_4:-29970665 Msa0324420:CDS
TGCAGATTTGCAAACGAGTA+GGG 0.518174 2_4:+29971838 None:intergenic
AAGTAGTATGGCGCTGGCAA+GGG 0.518739 2_4:-29970664 Msa0324420:CDS
CATTGCCTCACGAAGATACT+GGG 0.519621 2_4:+29969357 None:intergenic
TGGGTGTCTGTGGATAATTA+GGG 0.519886 2_4:+29970931 None:intergenic
TTGATGTTGCTGATGAGGAT+AGG 0.524642 2_4:-29971268 Msa0324420:CDS
TCGGCTTGCTCAATAGGGGT+TGG 0.524733 2_4:+29970231 None:intergenic
TGAAAATTTGGCCAGGCTGA+GGG 0.525084 2_4:-29970835 Msa0324420:CDS
GACCCTAGGAAATTGCGTCC+AGG 0.525314 2_4:-29971587 Msa0324420:CDS
TGGATCTCAACTAATTAGTA+GGG 0.526169 2_4:-29968887 Msa0324420:three_prime_UTR
CTGCAGATTTGCAAACGAGT+AGG 0.526600 2_4:+29971837 None:intergenic
AGCATTGTCATGCTCCAGTA+AGG 0.527412 2_4:+29970182 None:intergenic
ACCATTAGTGATACCATTGT+GGG 0.527710 2_4:-29971695 Msa0324420:CDS
CAAGTTCTTCTATAGTAGTA+GGG 0.528361 2_4:+29971225 None:intergenic
TAAAGGAGTCAAGGCTTGGT+TGG 0.528607 2_4:+29970911 None:intergenic
TGAGAATGTGAGAAGTAAGC+TGG 0.529343 2_4:-29969188 Msa0324420:CDS
GCTTGCTCAATAGGGGTTGG+TGG 0.531592 2_4:+29970234 None:intergenic
CACTCAGTCTTCTTAATGGA+AGG 0.532258 2_4:+29971779 None:intergenic
GCACTTCCAGGGGTTGCAGA+GGG 0.532965 2_4:+29970702 None:intergenic
TCATCCATATCAACAGGATC+GGG 0.534614 2_4:+29971527 None:intergenic
ACCCTAGGAAATTGCGTCCA+GGG 0.536757 2_4:-29971586 Msa0324420:CDS
ACTGTTAGGAGGAGAGAACC+TGG 0.540907 2_4:-29970799 Msa0324420:CDS
GATCCAAACGAGCAGCAAAT+GGG 0.542547 2_4:-29970116 Msa0324420:CDS
TCCCAGAAGTAGTATGGCGC+TGG 0.546410 2_4:-29970670 Msa0324420:CDS
CGTCGTCTTCACCAAGCCGC+AGG 0.549342 2_4:-29972480 Msa0324420:intron
AGAGAGAATTGAAGGCTGCT+GGG 0.549517 2_4:-29971379 Msa0324420:CDS
TGATCGGAAATCTGAGGTGG+TGG 0.551298 2_4:+29971047 None:intergenic
AGCCGACGAGATGATAAGAA+AGG 0.552168 2_4:-29970214 Msa0324420:CDS
GAAAAGAAGGATTGATGTTG+AGG 0.552508 2_4:-29971198 Msa0324420:CDS
GGTGAATGAGATAGACAGCT+AGG 0.552895 2_4:+29972510 None:intergenic
GGTTATGCCAGTGACCTTGT+GGG 0.556103 2_4:-29970999 Msa0324420:CDS
TGAGAAAGCAAGACGTTGCA+AGG 0.556741 2_4:-29971169 Msa0324420:CDS
GGTTCAACCTGTTTCGTGAG+AGG 0.557448 2_4:-29971975 Msa0324420:five_prime_UTR
GGGTTATGCCAGTGACCTTG+TGG 0.560009 2_4:-29971000 Msa0324420:CDS
GGATTCGGATCAATCTCCCC+TGG 0.561665 2_4:+29971569 None:intergenic
CCCCTGGACGCAATTTCCTA+GGG 0.562986 2_4:+29971585 None:intergenic
TAGAATCTCAGTAGCATCCA+AGG 0.563694 2_4:+29969002 None:intergenic
AGAAACAGCTTGAGGAAGCA+AGG 0.565360 2_4:-29971424 Msa0324420:CDS
TCAACAGGATCGGGTCGCGC+AGG 0.566355 2_4:+29971536 None:intergenic
ACGATCAAAAGTCATTCAAA+GGG 0.567785 2_4:-29970340 Msa0324420:CDS
TGGAGATGCGTGATAGTGCT+AGG 0.568497 2_4:-29970572 Msa0324420:CDS
AGGAGTTCTTAAAGGAGTCA+AGG 0.570143 2_4:+29970902 None:intergenic
TTGCAGAGGGAGTCAGCAGT+GGG 0.571318 2_4:+29970715 None:intergenic
ACTACTATAGAAGAACTTGA+GGG 0.571318 2_4:-29971221 Msa0324420:CDS
AGAGATTAATACCTGCGGCT+TGG 0.572447 2_4:+29972469 None:intergenic
TAAAGGAGATGCTATCATGA+TGG 0.573963 2_4:-29970862 Msa0324420:CDS
CTGAATGACCCAGAAACAGT+TGG 0.574442 2_4:-29971092 Msa0324420:CDS
TCTCAACTAATTAGTAGGGT+AGG 0.578245 2_4:-29968883 Msa0324420:three_prime_UTR
TTACTAGCTGGTGTTCTCTG+AGG 0.578802 2_4:+29970882 None:intergenic
TAGAGAAAAGGCAGAAGAAG+AGG 0.579560 2_4:-29970388 Msa0324420:CDS
ATGAACCTGGTGATGACCCT+AGG 0.580871 2_4:-29971601 Msa0324420:CDS
TTATTTGCTATCTCCTCAAG+CGG 0.583374 2_4:+29970153 None:intergenic
GTCACTGGCATAACCCAACT+TGG 0.585958 2_4:+29971007 None:intergenic
AAGGTTACATTACTCACGCA+AGG 0.586053 2_4:-29969130 Msa0324420:CDS
AGTAAGGCCTGCACTTCCAG+GGG 0.586407 2_4:+29970692 None:intergenic
GTAAAGCTCGTTGGTATGAG+TGG 0.588526 2_4:-29971808 Msa0324420:CDS
AACTCCTTGATAAGAGCTGA+CGG 0.589304 2_4:-29970276 Msa0324420:CDS
AAGGCTTGGTTGGGTGTCTG+TGG 0.589342 2_4:+29970921 None:intergenic
CCTGATAATCTTCTATGACA+GGG 0.589597 2_4:+29970085 None:intergenic
GACTGAGTGGACTCGAGAAG+AGG 0.592125 2_4:-29971765 Msa0324420:CDS
TGCTTCAACAAAATCCTCGA+GGG 0.592155 2_4:+29969318 None:intergenic
CCTTAACACAAGTGGCGTCA+AGG 0.592424 2_4:+29971633 None:intergenic
CTCCTTCGCAGTGTCTTGAA+CGG 0.594673 2_4:-29971667 Msa0324420:CDS
TGCTGATGAGGATAGGGAGG+TGG 0.595277 2_4:-29971261 Msa0324420:CDS
AGTATGGCGCTGGCAAGGGA+TGG 0.595638 2_4:-29970660 Msa0324420:CDS
CAGAACGGTGTAAAGCTCGT+TGG 0.595953 2_4:-29971817 Msa0324420:CDS
AGTGTTGCCAAAATGAGCAT+AGG 0.596521 2_4:-29971941 Msa0324420:exon
AACCATTAGTGATACCATTG+TGG 0.597390 2_4:-29971696 Msa0324420:CDS
TGAGAAGTAAGCTGGATGAT+GGG 0.598085 2_4:-29969180 Msa0324420:CDS
TACTACTATAGAAGAACTTG+AGG 0.598439 2_4:-29971222 Msa0324420:CDS
AAAAGGCAGAAGAAGAGGCA+CGG 0.599691 2_4:-29970383 Msa0324420:CDS
TGAGTTCATTGCTGCCCACA+AGG 0.602663 2_4:+29970985 None:intergenic
CTAATGGTTCTCCACTGAGT+AGG 0.603402 2_4:+29971710 None:intergenic
TGGAAGCTGAAAATTTGGCC+AGG 0.607474 2_4:-29970842 Msa0324420:CDS
GCTCGGTTGGCTAACACGAA+AGG 0.608258 2_4:-29971473 Msa0324420:CDS
TCTCAGACACCACTGTTAGG+AGG 0.609284 2_4:-29970810 Msa0324420:CDS
AGCGGAGGAGGAAAAGGAGA+GGG 0.609580 2_4:-29971343 Msa0324420:CDS
CAATGCTAAGTATCCGCTTG+AGG 0.613956 2_4:-29970166 Msa0324420:CDS
TACGAAGGGAACTCCTCTCA+GGG 0.614373 2_4:-29970619 Msa0324420:CDS
AATTTCCTAGGGTCATCACC+AGG 0.619740 2_4:+29971596 None:intergenic
CAGCGGAGGAGGAAAAGGAG+AGG 0.619802 2_4:-29971344 Msa0324420:CDS
CTGGGATTGATATAAGGCAG+CGG 0.621106 2_4:-29971361 Msa0324420:CDS
GTTATCGTCCTTAACACAAG+TGG 0.622208 2_4:+29971625 None:intergenic
CGAAGGAGTACGACCCACAA+TGG 0.624367 2_4:+29971682 None:intergenic
CCCTAGGAAATTGCGTCCAG+GGG 0.631019 2_4:-29971585 Msa0324420:CDS
CTCGTCGGCTTGCTCAATAG+GGG 0.633774 2_4:+29970227 None:intergenic
TTTGATACCCGTAACACACA+TGG 0.638610 2_4:-29969265 Msa0324420:CDS
TGGTGAAGACGACGATGCGG+CGG 0.638840 2_4:+29972489 None:intergenic
GGCATGCAGAATAGCAGCCG+GGG 0.639810 2_4:+29971121 None:intergenic
AAGGACGATAACTATGAACC+TGG 0.641325 2_4:-29971614 Msa0324420:CDS
GTGAATGAGATAGACAGCTA+GGG 0.645030 2_4:+29972511 None:intergenic
TGTTGCTGATGAGGATAGGG+AGG 0.645550 2_4:-29971264 Msa0324420:CDS
AGGTTCTCTCCTCCTAACAG+TGG 0.645695 2_4:+29970801 None:intergenic
GCAACATCAAAATAACCCAA+AGG 0.645993 2_4:+29971281 None:intergenic
AGAAGATGCTGAAGAGCCCG+AGG 0.646686 2_4:-29970445 Msa0324420:CDS
CTACTATAGAAGAACTTGAG+GGG 0.654103 2_4:-29971220 Msa0324420:CDS
GCCCGAGGAGAAGATTGAAG+AGG 0.654306 2_4:-29970430 Msa0324420:CDS
AACAATAATTGAAAGAAACA+CGG 0.658402 2_4:+29969052 None:intergenic
AATTCTTGATCGGAAATCTG+AGG 0.665249 2_4:+29971041 None:intergenic
AGCTAGGGAGAAACAGCTTG+AGG 0.665565 2_4:-29971432 Msa0324420:CDS
TACCGTTCAAGACACTGCGA+AGG 0.666095 2_4:+29971665 None:intergenic
AGGTTACATTACTCACGCAA+GGG 0.667391 2_4:-29969129 Msa0324420:CDS
GGCAGCAATGAACTCACCGA+AGG 0.667861 2_4:-29970978 Msa0324420:CDS
CTAAGCTTACGCCTACTCAG+TGG 0.671805 2_4:-29971721 Msa0324420:CDS
TCGTTTGCAAATCTGCAGAA+CGG 0.675444 2_4:-29971832 Msa0324420:CDS
TCTTGATCGGAAATCTGAGG+TGG 0.678038 2_4:+29971044 None:intergenic
ACATCAAAATAACCCAAAGG+AGG 0.679868 2_4:+29971284 None:intergenic
CTTCCATTAAGAAGACTGAG+TGG 0.680364 2_4:-29971778 Msa0324420:CDS
TGAAGCCCAGTATCTTCGTG+AGG 0.688109 2_4:-29969362 Msa0324420:CDS
GTGCTTCAACAAAATCCTCG+AGG 0.688213 2_4:+29969317 None:intergenic
ATATGTAGCTCATCCCTGAG+AGG 0.688581 2_4:+29970606 None:intergenic
GCTTGGTGAAGACGACGATG+CGG 0.691661 2_4:+29972486 None:intergenic
AGTATCTTCGTGAGGCAATG+GGG 0.691770 2_4:-29969354 Msa0324420:CDS
GGATTGATATAAGGCAGCGG+AGG 0.699913 2_4:-29971358 Msa0324420:CDS
ATAAGCTCCAGAGATGCTGG+AGG 0.701115 2_4:+29970303 None:intergenic
AACAGCTTGAGGAAGCAAGG+AGG 0.704973 2_4:-29971421 Msa0324420:CDS
TGATATGGATGAGTATGAGA+AGG 0.714958 2_4:-29971516 Msa0324420:CDS
TGTCATAGAAGATTATCAGG+AGG 0.727087 2_4:-29970082 Msa0324420:CDS
GCATGAAAATGATTCCCTCG+AGG 0.731393 2_4:-29969332 Msa0324420:CDS
TAAACGAGTCTCCTGCACTG+TGG 0.742646 2_4:-29972005 Msa0324420:five_prime_UTR
CAAGGAATAAAATTGCAGAG+AGG 0.745082 2_4:-29971151 Msa0324420:CDS
AGGTGTTTGGACAAACACCG+AGG 0.789261 2_4:-29971921 Msa0324420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCAAAATCTGAAATTTA+GGG + chr2_4:29969028-29969047 None:intergenic 15.0%
!!! TTTTTCAAAATCTGAAATTT+AGG + chr2_4:29969029-29969048 None:intergenic 15.0%
!! AAAAAAAATGAATAGTATAG+CGG + chr2_4:29969121-29969140 None:intergenic 15.0%
!! AGGCATAAAAATAAAATTAA+AGG + chr2_4:29971324-29971343 None:intergenic 15.0%
!! ATTATAACTGAAAAAAAACA+AGG + chr2_4:29971665-29971684 None:intergenic 15.0%
!! TTTCTTTCAATTATTGTTAA+TGG - chr2_4:29972292-29972311 Msa0324420:intron 15.0%
!!! TTCAGATTTTGAAAAACAAT+TGG - chr2_4:29969033-29969052 Msa0324420:three_prime_UTR 20.0%
!! AAGTTTGTATTACTATCATT+CGG + chr2_4:29971816-29971835 None:intergenic 20.0%
!! ATAATAATTAACAAGCAGTT+TGG + chr2_4:29971839-29971858 None:intergenic 20.0%
!! AACAATAATTGAAAGAAACA+CGG + chr2_4:29972290-29972309 None:intergenic 20.0%
! AATTCCAAAAATCAACTTCT+GGG + chr2_4:29969073-29969092 None:intergenic 25.0%
! AAATTCCAAAAATCAACTTC+TGG + chr2_4:29969074-29969093 None:intergenic 25.0%
!!! AAGTTGATTTTTGGAATTTG+AGG - chr2_4:29969075-29969094 Msa0324420:three_prime_UTR 25.0%
! TGAAATATGGTAAAAATCAG+TGG - chr2_4:29969465-29969484 Msa0324420:intron 25.0%
! GAAATATGGTAAAAATCAGT+GGG - chr2_4:29969466-29969485 Msa0324420:intron 25.0%
! AATTTCATCCAATTCTTGAT+CGG + chr2_4:29970311-29970330 None:intergenic 25.0%
!! ATGTGAATTTCCTTTTTCTT+AGG + chr2_4:29970598-29970617 None:intergenic 25.0%
! TTGTCCGATTATTAATTACT+TGG - chr2_4:29971478-29971497 Msa0324420:CDS 25.0%
! GATGCCAAGTAATTAATAAT+CGG + chr2_4:29971485-29971504 None:intergenic 25.0%
!! ATTTTTACATAAGATTCCAG+TGG + chr2_4:29971547-29971566 None:intergenic 25.0%
! TAGGGAATAAATGTTGTAAA+AGG + chr2_4:29971779-29971798 None:intergenic 25.0%
!! TTTTATCTGTTGTTCTCAAT+AGG - chr2_4:29971935-29971954 Msa0324420:exon 25.0%
! ATTACAAAACCAACTTTGAA+GGG + chr2_4:29972385-29972404 None:intergenic 25.0%
! TATTACAAAACCAACTTTGA+AGG + chr2_4:29972386-29972405 None:intergenic 25.0%
!!! AATTGCAACAGTTTTAAGTT+AGG + chr2_4:29972423-29972442 None:intergenic 25.0%
! GAATTGCATTTCATTATTGT+GGG - chr2_4:29972498-29972517 Msa0324420:five_prime_UTR 25.0%
CGAAATCAATGAATTGTAAG+AGG + chr2_4:29968939-29968958 None:intergenic 30.0%
!! CCATTACAATCGATTTTCTA+GGG - chr2_4:29968977-29968996 Msa0324420:three_prime_UTR 30.0%
GAAAAACAATTGGATTTCGT+TGG - chr2_4:29969043-29969062 Msa0324420:three_prime_UTR 30.0%
!! AGGTTGTCATTGTTTGTTTT+TGG - chr2_4:29969095-29969114 Msa0324420:exon 30.0%
TAGAGGTCAAATGCAATTAA+GGG + chr2_4:29969159-29969178 None:intergenic 30.0%
AATTGATCTGACAGTAGAAA+GGG + chr2_4:29969209-29969228 None:intergenic 30.0%
AAAGCTGCTGTTATGAAATA+TGG - chr2_4:29969452-29969471 Msa0324420:intron 30.0%
CGAAAGGTAAAAAAGCAAAA+AGG - chr2_4:29969882-29969901 Msa0324420:intron 30.0%
AAAAAGCAAAAAGGAAAGCT+AGG - chr2_4:29969891-29969910 Msa0324420:intron 30.0%
AAAAGCAAAAAGGAAAGCTA+GGG - chr2_4:29969892-29969911 Msa0324420:intron 30.0%
ACAGAAAAAGAGAGAATTGA+AGG - chr2_4:29969952-29969971 Msa0324420:intron 30.0%
!!! TTATTTTGATGTTGCTGATG+AGG - chr2_4:29970066-29970085 Msa0324420:intron 30.0%
CAAGTTCTTCTATAGTAGTA+GGG + chr2_4:29970117-29970136 None:intergenic 30.0%
TCAAGTTCTTCTATAGTAGT+AGG + chr2_4:29970118-29970137 None:intergenic 30.0%
TACTACTATAGAAGAACTTG+AGG - chr2_4:29970117-29970136 Msa0324420:CDS 30.0%
ACTACTATAGAAGAACTTGA+GGG - chr2_4:29970118-29970137 Msa0324420:CDS 30.0%
GCTACATATCAATGAAGATA+TGG - chr2_4:29970747-29970766 Msa0324420:CDS 30.0%
!! ACTATCTGGTACTCATTTTT+AGG + chr2_4:29970859-29970878 None:intergenic 30.0%
AACGATCAAAAGTCATTCAA+AGG - chr2_4:29970998-29971017 Msa0324420:CDS 30.0%
ACGATCAAAAGTCATTCAAA+GGG - chr2_4:29970999-29971018 Msa0324420:CDS 30.0%
ATGAAGAAAAGCGAAGTAAA+AGG + chr2_4:29971344-29971363 None:intergenic 30.0%
AATATGCAACTAGCTCATAA+AGG + chr2_4:29971613-29971632 None:intergenic 30.0%
TATGAGCTAGTTGCATATTA+TGG - chr2_4:29971614-29971633 Msa0324420:CDS 30.0%
TGACTCCTTAAATTTGACTA+TGG - chr2_4:29971860-29971879 Msa0324420:CDS 30.0%
CATCTCCATAGTCAAATTTA+AGG + chr2_4:29971868-29971887 None:intergenic 30.0%
!! CTGTTGCAATTGTTGATTTA+TGG - chr2_4:29972432-29972451 Msa0324420:intron 30.0%
ATGGATCTCAACTAATTAGT+AGG - chr2_4:29972451-29972470 Msa0324420:intron 30.0%
TGGATCTCAACTAATTAGTA+GGG - chr2_4:29972452-29972471 Msa0324420:intron 30.0%
GGAATTGCATTTCATTATTG+TGG - chr2_4:29972497-29972516 Msa0324420:five_prime_UTR 30.0%
AAGCAAGAGATTAATACCTG+CGG + chr2_4:29968878-29968897 None:intergenic 35.0%
AGAGGTTAAAATCGCAGAAT+AGG + chr2_4:29968921-29968940 None:intergenic 35.0%
!! GCCATTACAATCGATTTTCT+AGG - chr2_4:29968976-29968995 Msa0324420:three_prime_UTR 35.0%
CCCTAGAAAATCGATTGTAA+TGG + chr2_4:29968980-29968999 None:intergenic 35.0%
! AATCTGAAATTTAGGGTGAG+CGG + chr2_4:29969021-29969040 None:intergenic 35.0%
!! AATGCAATTAAGGGTTGGTT+TGG + chr2_4:29969150-29969169 None:intergenic 35.0%
GTAGAGGTCAAATGCAATTA+AGG + chr2_4:29969160-29969179 None:intergenic 35.0%
TACTTGTACATCACCGAATT+CGG - chr2_4:29969177-29969196 Msa0324420:CDS 35.0%
ATTGATCTGACAGTAGAAAG+GGG + chr2_4:29969208-29969227 None:intergenic 35.0%
GAATTGATCTGACAGTAGAA+AGG + chr2_4:29969210-29969229 None:intergenic 35.0%
GAGATTGATACAAGTAGCTA+GGG + chr2_4:29969248-29969267 None:intergenic 35.0%
AGAGATTGATACAAGTAGCT+AGG + chr2_4:29969249-29969268 None:intergenic 35.0%
ATTTCATAACAGCAGCTTTC+AGG + chr2_4:29969451-29969470 None:intergenic 35.0%
AACCATTAGTGATACCATTG+TGG - chr2_4:29969643-29969662 Msa0324420:intron 35.0%
ACCATTAGTGATACCATTGT+GGG - chr2_4:29969644-29969663 Msa0324420:intron 35.0%
TCATACTCATCCATATCAAC+AGG + chr2_4:29969821-29969840 None:intergenic 35.0%
TGATATGGATGAGTATGAGA+AGG - chr2_4:29969823-29969842 Msa0324420:intron 35.0%
CAGAAATTCCGTTTGAGAAA+AGG - chr2_4:29970032-29970051 Msa0324420:intron 35.0%
ACATCAAAATAACCCAAAGG+AGG + chr2_4:29970058-29970077 None:intergenic 35.0%
GCAACATCAAAATAACCCAA+AGG + chr2_4:29970061-29970080 None:intergenic 35.0%
CTACTATAGAAGAACTTGAG+GGG - chr2_4:29970119-29970138 Msa0324420:CDS 35.0%
GAAAAGAAGGATTGATGTTG+AGG - chr2_4:29970141-29970160 Msa0324420:CDS 35.0%
CAAGGAATAAAATTGCAGAG+AGG - chr2_4:29970188-29970207 Msa0324420:CDS 35.0%
! ATCTCTTTCCAACTGTTTCT+GGG + chr2_4:29970258-29970277 None:intergenic 35.0%
AATTCTTGATCGGAAATCTG+AGG + chr2_4:29970301-29970320 None:intergenic 35.0%
TCAGATTTCCGATCAAGAAT+TGG - chr2_4:29970300-29970319 Msa0324420:CDS 35.0%
ATTGGATGAAATTGCCAAGT+TGG - chr2_4:29970318-29970337 Msa0324420:CDS 35.0%
TTGGATGAAATTGCCAAGTT+GGG - chr2_4:29970319-29970338 Msa0324420:CDS 35.0%
TAAAGGAGATGCTATCATGA+TGG - chr2_4:29970477-29970496 Msa0324420:CDS 35.0%
! CATGATGGAAGCTGAAAATT+TGG - chr2_4:29970492-29970511 Msa0324420:CDS 35.0%
! TTGCATCCTTCAGATTTTTC+TGG - chr2_4:29970565-29970584 Msa0324420:CDS 35.0%
! TGCATCCTTCAGATTTTTCT+GGG - chr2_4:29970566-29970585 Msa0324420:CDS 35.0%
TCTTCAGCATCTTCTTGAAT+TGG + chr2_4:29970889-29970908 None:intergenic 35.0%
AGAGGATATGTCTGATAGAA+TGG - chr2_4:29970927-29970946 Msa0324420:CDS 35.0%
TGATAGAATGGCTAGAGAAA+AGG - chr2_4:29970939-29970958 Msa0324420:CDS 35.0%
!! TTATTTGCTATCTCCTCAAG+CGG + chr2_4:29971189-29971208 None:intergenic 35.0%
CCTGATAATCTTCTATGACA+GGG + chr2_4:29971257-29971276 None:intergenic 35.0%
TCCTGATAATCTTCTATGAC+AGG + chr2_4:29971258-29971277 None:intergenic 35.0%
TGTCATAGAAGATTATCAGG+AGG - chr2_4:29971257-29971276 Msa0324420:CDS 35.0%
AAGATTCCAGTGGTTTCAAA+GGG + chr2_4:29971537-29971556 None:intergenic 35.0%
TAAGATTCCAGTGGTTTCAA+AGG + chr2_4:29971538-29971557 None:intergenic 35.0%
TCGGCGAATTAACGTAAATA+GGG + chr2_4:29971797-29971816 None:intergenic 35.0%
TTCGGCGAATTAACGTAAAT+AGG + chr2_4:29971798-29971817 None:intergenic 35.0%
TTGATAGACCATGTGTGTTA+CGG + chr2_4:29972085-29972104 None:intergenic 35.0%
! TTTGTAGTTGTCTAGTTCCT+TGG - chr2_4:29972320-29972339 Msa0324420:intron 35.0%
TCTCAACTAATTAGTAGGGT+AGG - chr2_4:29972456-29972475 Msa0324420:intron 35.0%
!!! GTGTAAAGCCCTTTTTGGTT+TGG + chr2_4:29968795-29968814 None:intergenic 40.0%
!! AGAGAGTGTAAAGCCCTTTT+TGG + chr2_4:29968800-29968819 None:intergenic 40.0%
GTGAATGAGATAGACAGCTA+GGG + chr2_4:29968831-29968850 None:intergenic 40.0%
CCAAAAATCAACTTCTGGGT+AGG + chr2_4:29969069-29969088 None:intergenic 40.0%
!! CCTACCCAGAAGTTGATTTT+TGG - chr2_4:29969066-29969085 Msa0324420:three_prime_UTR 40.0%
GGTCAAATGCAATTAAGGGT+TGG + chr2_4:29969155-29969174 None:intergenic 40.0%
! ATTCGGTGATGTACAAGTAG+AGG + chr2_4:29969176-29969195 None:intergenic 40.0%
ACTTGTACATCACCGAATTC+GGG - chr2_4:29969178-29969197 Msa0324420:CDS 40.0%
! AAGTAGCTAGGGTTCTGATA+TGG + chr2_4:29969237-29969256 None:intergenic 40.0%
TTGTATTCCTCTCACGAAAC+AGG + chr2_4:29969374-29969393 None:intergenic 40.0%
AGTGTTGCCAAAATGAGCAT+AGG - chr2_4:29969398-29969417 Msa0324420:intron 40.0%
! CCAAACACCTATGCTCATTT+TGG + chr2_4:29969408-29969427 None:intergenic 40.0%
CCAAAATGAGCATAGGTGTT+TGG - chr2_4:29969405-29969424 Msa0324420:intron 40.0%
AGCTTTCAGGATTTCATCCT+CGG + chr2_4:29969438-29969457 None:intergenic 40.0%
TGCAGATTTGCAAACGAGTA+GGG + chr2_4:29969504-29969523 None:intergenic 40.0%
TCGTTTGCAAATCTGCAGAA+CGG - chr2_4:29969507-29969526 Msa0324420:intron 40.0%
CACTCAGTCTTCTTAATGGA+AGG + chr2_4:29969563-29969582 None:intergenic 40.0%
CTTCCATTAAGAAGACTGAG+TGG - chr2_4:29969561-29969580 Msa0324420:intron 40.0%
AGTCCACTCAGTCTTCTTAA+TGG + chr2_4:29969567-29969586 None:intergenic 40.0%
ACCCACAATGGTATCACTAA+TGG + chr2_4:29969648-29969667 None:intergenic 40.0%
GTTATCGTCCTTAACACAAG+TGG + chr2_4:29969717-29969736 None:intergenic 40.0%
AAGGACGATAACTATGAACC+TGG - chr2_4:29969725-29969744 Msa0324420:intron 40.0%
TCATCCATATCAACAGGATC+GGG + chr2_4:29969815-29969834 None:intergenic 40.0%
CTCATCCATATCAACAGGAT+CGG + chr2_4:29969816-29969835 None:intergenic 40.0%
! AAAGGAGGCCTTTTCTCAAA+CGG + chr2_4:29970043-29970062 None:intergenic 40.0%
TTTGAGAAAAGGCCTCCTTT+GGG - chr2_4:29970043-29970062 Msa0324420:intron 40.0%
TTGATGTTGCTGATGAGGAT+AGG - chr2_4:29970071-29970090 Msa0324420:CDS 40.0%
TGATGTTGCTGATGAGGATA+GGG - chr2_4:29970072-29970091 Msa0324420:CDS 40.0%
AAGAACTTGAGGGGAAAAGA+AGG - chr2_4:29970128-29970147 Msa0324420:CDS 40.0%
GATCTCTTTCCAACTGTTTC+TGG + chr2_4:29970259-29970278 None:intergenic 40.0%
TGGGTGTCTGTGGATAATTA+GGG + chr2_4:29970411-29970430 None:intergenic 40.0%
TTGGGTGTCTGTGGATAATT+AGG + chr2_4:29970412-29970431 None:intergenic 40.0%
TTCTTAAAGGAGTCAAGGCT+TGG + chr2_4:29970435-29970454 None:intergenic 40.0%
AGGAGTTCTTAAAGGAGTCA+AGG + chr2_4:29970440-29970459 None:intergenic 40.0%
! GTTCTCTGAGGAGTTCTTAA+AGG + chr2_4:29970448-29970467 None:intergenic 40.0%
ATAGCATCTCCTTTACTAGC+TGG + chr2_4:29970472-29970491 None:intergenic 40.0%
! GCATCCTTCAGATTTTTCTG+GGG - chr2_4:29970567-29970586 Msa0324420:CDS 40.0%
! GCAAGGGATGGTTTTTCTTT+TGG - chr2_4:29970691-29970710 Msa0324420:CDS 40.0%
! TTCTTTTGGCATGACTACGA+AGG - chr2_4:29970705-29970724 Msa0324420:CDS 40.0%
! TCTTTTGGCATGACTACGAA+GGG - chr2_4:29970706-29970725 Msa0324420:CDS 40.0%
ATGAAAAAAAGTCTGCGCTC+TGG - chr2_4:29970814-29970833 Msa0324420:CDS 40.0%
!! ACTCATTTTTAGGCTGTGGA+AGG + chr2_4:29970849-29970868 None:intergenic 40.0%
!! TGGTACTCATTTTTAGGCTG+TGG + chr2_4:29970853-29970872 None:intergenic 40.0%
GAATTGGTTGCATCACTATC+TGG + chr2_4:29970873-29970892 None:intergenic 40.0%
ATCCTCTTCAATCTTCTCCT+CGG + chr2_4:29970914-29970933 None:intergenic 40.0%
TAGAGAAAAGGCAGAAGAAG+AGG - chr2_4:29970951-29970970 Msa0324420:CDS 40.0%
TCATTCAAAGGGAACTTCCT+AGG - chr2_4:29971010-29971029 Msa0324420:CDS 40.0%
AACTCCTTGATAAGAGCTGA+CGG - chr2_4:29971063-29971082 Msa0324420:CDS 40.0%
CTCCTTTCTTATCATCTCGT+CGG + chr2_4:29971130-29971149 None:intergenic 40.0%
GCTTGAGGAGATAGCAAATA+AGG - chr2_4:29971188-29971207 Msa0324420:CDS 40.0%
GCAAATAAGGAGAGAGAGAA+AGG - chr2_4:29971201-29971220 Msa0324420:CDS 40.0%
CCCTGTCATAGAAGATTATC+AGG - chr2_4:29971254-29971273 Msa0324420:CDS 40.0%
! TTGTTCACCTTTTCACCCTT+TGG - chr2_4:29971379-29971398 Msa0324420:CDS 40.0%
! TGTTCACCTTTTCACCCTTT+GGG - chr2_4:29971380-29971399 Msa0324420:CDS 40.0%
TGGTTTCAAAGGGGTGAAAA+GGG + chr2_4:29971527-29971546 None:intergenic 40.0%
AGATTCCAGTGGTTTCAAAG+GGG + chr2_4:29971536-29971555 None:intergenic 40.0%
GAGCTAGTTGCATATTATGG+TGG - chr2_4:29971617-29971636 Msa0324420:CDS 40.0%
TGCTTCAACAAAATCCTCGA+GGG + chr2_4:29972024-29972043 None:intergenic 40.0%
TTTGATACCCGTAACACACA+TGG - chr2_4:29972074-29972093 Msa0324420:intron 40.0%
TGATAGACCATGTGTGTTAC+GGG + chr2_4:29972084-29972103 None:intergenic 40.0%
TGAGAATGTGAGAAGTAAGC+TGG - chr2_4:29972151-29972170 Msa0324420:intron 40.0%
TGAGAAGTAAGCTGGATGAT+GGG - chr2_4:29972159-29972178 Msa0324420:intron 40.0%
! GATGATTCGACTTGAGAAGA+AGG - chr2_4:29972190-29972209 Msa0324420:intron 40.0%
AAGGTTACATTACTCACGCA+AGG - chr2_4:29972209-29972228 Msa0324420:intron 40.0%
AGGTTACATTACTCACGCAA+GGG - chr2_4:29972210-29972229 Msa0324420:intron 40.0%
TAGAATCTCAGTAGCATCCA+AGG + chr2_4:29972340-29972359 None:intergenic 40.0%
GTCTAAATGCCCTTCAAAGT+TGG - chr2_4:29972373-29972392 Msa0324420:intron 40.0%
AGGAGATCATGTAGATCTGT+TGG - chr2_4:29972476-29972495 Msa0324420:intron 40.0%
GGTGAATGAGATAGACAGCT+AGG + chr2_4:29968832-29968851 None:intergenic 45.0%
AGAGATTAATACCTGCGGCT+TGG + chr2_4:29968873-29968892 None:intergenic 45.0%
! TAGCTAGGGTTCTGATATGG+TGG + chr2_4:29969234-29969253 None:intergenic 45.0%
! TCTCACGAAACAGGTTGAAC+CGG + chr2_4:29969365-29969384 None:intergenic 45.0%
CTGCAGATTTGCAAACGAGT+AGG + chr2_4:29969505-29969524 None:intergenic 45.0%
GTAAAGCTCGTTGGTATGAG+TGG - chr2_4:29969531-29969550 Msa0324420:intron 45.0%
CTAATGGTTCTCCACTGAGT+AGG + chr2_4:29969632-29969651 None:intergenic 45.0%
AATTTCCTAGGGTCATCACC+AGG + chr2_4:29969746-29969765 None:intergenic 45.0%
AGAAACAGCTTGAGGAAGCA+AGG - chr2_4:29969915-29969934 Msa0324420:intron 45.0%
AAGAGAGAATTGAAGGCTGC+TGG - chr2_4:29969959-29969978 Msa0324420:intron 45.0%
AGAGAGAATTGAAGGCTGCT+GGG - chr2_4:29969960-29969979 Msa0324420:intron 45.0%
AGGCTGCTGGGATTGATATA+AGG - chr2_4:29969972-29969991 Msa0324420:intron 45.0%
CTGGGATTGATATAAGGCAG+CGG - chr2_4:29969978-29969997 Msa0324420:intron 45.0%
GTTTGAGAAAAGGCCTCCTT+TGG - chr2_4:29970042-29970061 Msa0324420:intron 45.0%
TGAGAAAGCAAGACGTTGCA+AGG - chr2_4:29970170-29970189 Msa0324420:CDS 45.0%
TTCTGGGTCATTCAGCTTCT+TGG + chr2_4:29970242-29970261 None:intergenic 45.0%
CTGAATGACCCAGAAACAGT+TGG - chr2_4:29970247-29970266 Msa0324420:CDS 45.0%
TCTTGATCGGAAATCTGAGG+TGG + chr2_4:29970298-29970317 None:intergenic 45.0%
! AAAGGAGTCAAGGCTTGGTT+GGG + chr2_4:29970430-29970449 None:intergenic 45.0%
! TAAAGGAGTCAAGGCTTGGT+TGG + chr2_4:29970431-29970450 None:intergenic 45.0%
TTACTAGCTGGTGTTCTCTG+AGG + chr2_4:29970460-29970479 None:intergenic 45.0%
CAGAGAACACCAGCTAGTAA+AGG - chr2_4:29970460-29970479 Msa0324420:CDS 45.0%
TGGAAGCTGAAAATTTGGCC+AGG - chr2_4:29970497-29970516 Msa0324420:CDS 45.0%
TGAAAATTTGGCCAGGCTGA+GGG - chr2_4:29970504-29970523 Msa0324420:CDS 45.0%
AATCTGAAGGATGCAACTCC+AGG + chr2_4:29970561-29970580 None:intergenic 45.0%
GTGACCCCAGAAAAATCTGA+AGG + chr2_4:29970574-29970593 None:intergenic 45.0%
TGGGGTCACTCCTAAGAAAA+AGG - chr2_4:29970585-29970604 Msa0324420:CDS 45.0%
! CCATACTACTTCTGGGAGTA+AGG + chr2_4:29970666-29970685 None:intergenic 45.0%
CCTTACTCCCAGAAGTAGTA+TGG - chr2_4:29970663-29970682 Msa0324420:CDS 45.0%
ATATGTAGCTCATCCCTGAG+AGG + chr2_4:29970736-29970755 None:intergenic 45.0%
TCCTCTTCAATCTTCTCCTC+GGG + chr2_4:29970913-29970932 None:intergenic 45.0%
AAAAGGCAGAAGAAGAGGCA+CGG - chr2_4:29970956-29970975 Msa0324420:CDS 45.0%
CTAATAAGCTCCAGAGATGC+TGG + chr2_4:29971042-29971061 None:intergenic 45.0%
!! CAGCATCTCTGGAGCTTATT+AGG - chr2_4:29971040-29971059 Msa0324420:CDS 45.0%
AGCCGACGAGATGATAAGAA+AGG - chr2_4:29971125-29971144 Msa0324420:CDS 45.0%
AGCATTGTCATGCTCCAGTA+AGG + chr2_4:29971160-29971179 None:intergenic 45.0%
CAATGCTAAGTATCCGCTTG+AGG - chr2_4:29971173-29971192 Msa0324420:CDS 45.0%
GATCCAAACGAGCAGCAAAT+GGG - chr2_4:29971223-29971242 Msa0324420:CDS 45.0%
TCTTCTATGACAGGGATAGC+AGG + chr2_4:29971249-29971268 None:intergenic 45.0%
! GTTCACCTTTTCACCCTTTG+GGG - chr2_4:29971381-29971400 Msa0324420:CDS 45.0%
ATCACGTTGTGTACCCCAAA+GGG + chr2_4:29971397-29971416 None:intergenic 45.0%
AATCACGTTGTGTACCCCAA+AGG + chr2_4:29971398-29971417 None:intergenic 45.0%
GGTTTCAAAGGGGTGAAAAG+GGG + chr2_4:29971526-29971545 None:intergenic 45.0%
GTGGTTTCAAAGGGGTGAAA+AGG + chr2_4:29971528-29971547 None:intergenic 45.0%
!! TTTCACCCCTTTGAAACCAC+TGG - chr2_4:29971528-29971547 Msa0324420:CDS 45.0%
CATTGCCTCACGAAGATACT+GGG + chr2_4:29971985-29972004 None:intergenic 45.0%
CAGTATCTTCGTGAGGCAAT+GGG - chr2_4:29971984-29972003 Msa0324420:five_prime_UTR 45.0%
AGTATCTTCGTGAGGCAATG+GGG - chr2_4:29971985-29972004 Msa0324420:five_prime_UTR 45.0%
GCATGAAAATGATTCCCTCG+AGG - chr2_4:29972007-29972026 Msa0324420:five_prime_UTR 45.0%
GTGCTTCAACAAAATCCTCG+AGG + chr2_4:29972025-29972044 None:intergenic 45.0%
! CATGGTCTATCAAGTGTTGC+TGG - chr2_4:29972092-29972111 Msa0324420:intron 45.0%
GTGAGAAGTAAGCTGGATGA+TGG - chr2_4:29972158-29972177 Msa0324420:intron 45.0%
!! AAGTAAGCTGGATGATGGGA+AGG - chr2_4:29972163-29972182 Msa0324420:intron 45.0%
!! AAAAATTAAATAGAAAAATT+TGG - chr2_4:29971561-29971580 Msa0324420:CDS 5.0%
!! TTATAATCATTTAATTAATT+AGG - chr2_4:29971678-29971697 Msa0324420:CDS 5.0%
GTGAGCGGAAGAGAGGAAAT+AGG + chr2_4:29969006-29969025 None:intergenic 50.0%
! ATTTAGGGTGAGCGGAAGAG+AGG + chr2_4:29969013-29969032 None:intergenic 50.0%
GAAAGGGGTAGTCCCGAATT+CGG + chr2_4:29969193-29969212 None:intergenic 50.0%
TAAACGAGTCTCCTGCACTG+TGG - chr2_4:29969334-29969353 Msa0324420:CDS 50.0%
! CTCCTGCACTGTGGTTTTTC+CGG - chr2_4:29969343-29969362 Msa0324420:CDS 50.0%
AACCGGAAAAACCACAGTGC+AGG + chr2_4:29969348-29969367 None:intergenic 50.0%
GGTTCAACCTGTTTCGTGAG+AGG - chr2_4:29969364-29969383 Msa0324420:CDS 50.0%
AGGTGTTTGGACAAACACCG+AGG - chr2_4:29969418-29969437 Msa0324420:intron 50.0%
CAGAACGGTGTAAAGCTCGT+TGG - chr2_4:29969522-29969541 Msa0324420:intron 50.0%
CTAAGCTTACGCCTACTCAG+TGG - chr2_4:29969618-29969637 Msa0324420:intron 50.0%
CTCCTTCGCAGTGTCTTGAA+CGG - chr2_4:29969672-29969691 Msa0324420:intron 50.0%
TACCGTTCAAGACACTGCGA+AGG + chr2_4:29969677-29969696 None:intergenic 50.0%
CCTTAACACAAGTGGCGTCA+AGG + chr2_4:29969709-29969728 None:intergenic 50.0%
CCTTGACGCCACTTGTGTTA+AGG - chr2_4:29969706-29969725 Msa0324420:intron 50.0%
! ATGAACCTGGTGATGACCCT+AGG - chr2_4:29969738-29969757 Msa0324420:intron 50.0%
ACCCTAGGAAATTGCGTCCA+GGG - chr2_4:29969753-29969772 Msa0324420:intron 50.0%
GCAGGCTTCGATTCAGGATT+CGG + chr2_4:29969788-29969807 None:intergenic 50.0%
TGCTTTCCGAAGCATGTGCT+CGG - chr2_4:29969849-29969868 Msa0324420:intron 50.0%
AGCTAGGGAGAAACAGCTTG+AGG - chr2_4:29969907-29969926 Msa0324420:intron 50.0%
AACAGCTTGAGGAAGCAAGG+AGG - chr2_4:29969918-29969937 Msa0324420:intron 50.0%
GGATTGATATAAGGCAGCGG+AGG - chr2_4:29969981-29970000 Msa0324420:intron 50.0%
TTGATATAAGGCAGCGGAGG+AGG - chr2_4:29969984-29970003 Msa0324420:intron 50.0%
TGTTGCTGATGAGGATAGGG+AGG - chr2_4:29970075-29970094 Msa0324420:CDS 50.0%
TTGGCATGCAGAATAGCAGC+CGG + chr2_4:29970223-29970242 None:intergenic 50.0%
! TGATCGGAAATCTGAGGTGG+TGG + chr2_4:29970295-29970314 None:intergenic 50.0%
GTCACTGGCATAACCCAACT+TGG + chr2_4:29970335-29970354 None:intergenic 50.0%
GGTTATGCCAGTGACCTTGT+GGG - chr2_4:29970340-29970359 Msa0324420:CDS 50.0%
TGAGTTCATTGCTGCCCACA+AGG + chr2_4:29970357-29970376 None:intergenic 50.0%
CTGAAAATTTGGCCAGGCTG+AGG - chr2_4:29970503-29970522 Msa0324420:CDS 50.0%
GAGTCTCAGACACCACTGTT+AGG - chr2_4:29970526-29970545 Msa0324420:CDS 50.0%
TCTCAGACACCACTGTTAGG+AGG - chr2_4:29970529-29970548 Msa0324420:CDS 50.0%
AGGTTCTCTCCTCCTAACAG+TGG + chr2_4:29970541-29970560 None:intergenic 50.0%
ACTGTTAGGAGGAGAGAACC+TGG - chr2_4:29970540-29970559 Msa0324420:CDS 50.0%
!! AAGTAGTATGGCGCTGGCAA+GGG - chr2_4:29970675-29970694 Msa0324420:CDS 50.0%
TACGAAGGGAACTCCTCTCA+GGG - chr2_4:29970720-29970739 Msa0324420:CDS 50.0%
! TGGAGATGCGTGATAGTGCT+AGG - chr2_4:29970767-29970786 Msa0324420:CDS 50.0%
ATAAGCTCCAGAGATGCTGG+AGG + chr2_4:29971039-29971058 None:intergenic 50.0%
GTCTCCGTCAGCTCTTATCA+AGG + chr2_4:29971070-29971089 None:intergenic 50.0%
!! TCTCGTCGGCTTGCTCAATA+GGG + chr2_4:29971116-29971135 None:intergenic 50.0%
!! ATCTCGTCGGCTTGCTCAAT+AGG + chr2_4:29971117-29971136 None:intergenic 50.0%
AAAGGAGCTTCCAGCCTTAC+TGG - chr2_4:29971143-29971162 Msa0324420:CDS 50.0%
TTGTCATGCTCCAGTAAGGC+TGG + chr2_4:29971156-29971175 None:intergenic 50.0%
GGATCCAAACGAGCAGCAAA+TGG - chr2_4:29971222-29971241 Msa0324420:CDS 50.0%
GTGTACCCCAAAGGGTGAAA+AGG + chr2_4:29971389-29971408 None:intergenic 50.0%
TGAAGCCCAGTATCTTCGTG+AGG - chr2_4:29971977-29971996 Msa0324420:five_prime_UTR 50.0%
CCATTGCCTCACGAAGATAC+TGG + chr2_4:29971986-29972005 None:intergenic 50.0%
CCAGTATCTTCGTGAGGCAA+TGG - chr2_4:29971983-29972002 Msa0324420:five_prime_UTR 50.0%
! GCTTGGTGAAGACGACGATG+CGG + chr2_4:29968856-29968875 None:intergenic 55.0%
! GACTGAGTGGACTCGAGAAG+AGG - chr2_4:29969574-29969593 Msa0324420:intron 55.0%
! CGAAGGAGTACGACCCACAA+TGG + chr2_4:29969660-29969679 None:intergenic 55.0%
GACCCTAGGAAATTGCGTCC+AGG - chr2_4:29969752-29969771 Msa0324420:intron 55.0%
CCCCTGGACGCAATTTCCTA+GGG + chr2_4:29969757-29969776 None:intergenic 55.0%
CCCTAGGAAATTGCGTCCAG+GGG - chr2_4:29969754-29969773 Msa0324420:intron 55.0%
TCCCCTGGACGCAATTTCCT+AGG + chr2_4:29969758-29969777 None:intergenic 55.0%
GGATTCGGATCAATCTCCCC+TGG + chr2_4:29969773-29969792 None:intergenic 55.0%
GCGACCCGATCCTGTTGATA+TGG - chr2_4:29969808-29969827 Msa0324420:intron 55.0%
TTCCGAAGCATGTGCTCGGT+TGG - chr2_4:29969853-29969872 Msa0324420:intron 55.0%
AGCCAACCGAGCACATGCTT+CGG + chr2_4:29969858-29969877 None:intergenic 55.0%
! GCTCGGTTGGCTAACACGAA+AGG - chr2_4:29969866-29969885 Msa0324420:intron 55.0%
TAAGGCAGCGGAGGAGGAAA+AGG - chr2_4:29969990-29970009 Msa0324420:intron 55.0%
AGCGGAGGAGGAAAAGGAGA+GGG - chr2_4:29969996-29970015 Msa0324420:intron 55.0%
TGCTGATGAGGATAGGGAGG+TGG - chr2_4:29970078-29970097 Msa0324420:CDS 55.0%
TGGCATGCAGAATAGCAGCC+GGG + chr2_4:29970222-29970241 None:intergenic 55.0%
GGGTTATGCCAGTGACCTTG+TGG - chr2_4:29970339-29970358 Msa0324420:CDS 55.0%
ATTGCTGCCCACAAGGTCAC+TGG + chr2_4:29970350-29970369 None:intergenic 55.0%
GGCAGCAATGAACTCACCGA+AGG - chr2_4:29970361-29970380 Msa0324420:CDS 55.0%
ACGAGTAGCACTGCTGCCTT+CGG + chr2_4:29970380-29970399 None:intergenic 55.0%
! AAGGCTTGGTTGGGTGTCTG+TGG + chr2_4:29970421-29970440 None:intergenic 55.0%
TTGCAGAGGGAGTCAGCAGT+GGG + chr2_4:29970627-29970646 None:intergenic 55.0%
AGTAAGGCCTGCACTTCCAG+GGG + chr2_4:29970650-29970669 None:intergenic 55.0%
GAGTAAGGCCTGCACTTCCA+GGG + chr2_4:29970651-29970670 None:intergenic 55.0%
TCCCAGAAGTAGTATGGCGC+TGG - chr2_4:29970669-29970688 Msa0324420:CDS 55.0%
GCCAGCGCCATACTACTTCT+GGG + chr2_4:29970673-29970692 None:intergenic 55.0%
TGCCAGCGCCATACTACTTC+TGG + chr2_4:29970674-29970693 None:intergenic 55.0%
!! GAAGTAGTATGGCGCTGGCA+AGG - chr2_4:29970674-29970693 Msa0324420:CDS 55.0%
CTACGAAGGGAACTCCTCTC+AGG - chr2_4:29970719-29970738 Msa0324420:CDS 55.0%
AGAAGATGCTGAAGAGCCCG+AGG - chr2_4:29970894-29970913 Msa0324420:CDS 55.0%
GCCCGAGGAGAAGATTGAAG+AGG - chr2_4:29970909-29970928 Msa0324420:CDS 55.0%
! AGAAGAAGAGGCACGGCAGA+AGG - chr2_4:29970963-29970982 Msa0324420:CDS 55.0%
GCTTGCTCAATAGGGGTTGG+TGG + chr2_4:29971108-29971127 None:intergenic 55.0%
! TCGGCTTGCTCAATAGGGGT+TGG + chr2_4:29971111-29971130 None:intergenic 55.0%
!! CTCGTCGGCTTGCTCAATAG+GGG + chr2_4:29971115-29971134 None:intergenic 55.0%
! AGGCCCATTTGCTGCTCGTT+TGG + chr2_4:29971229-29971248 None:intergenic 55.0%
TGGTGAAGACGACGATGCGG+CGG + chr2_4:29968853-29968872 None:intergenic 60.0%
CAGCGGAGGAGGAAAAGGAG+AGG - chr2_4:29969995-29970014 Msa0324420:intron 60.0%
TGCAGAGAGGCAAGATGCCC+CGG - chr2_4:29970201-29970220 Msa0324420:CDS 60.0%
GGCATGCAGAATAGCAGCCG+GGG + chr2_4:29970221-29970240 None:intergenic 60.0%
! TGTCTGAGACTCCCTCAGCC+TGG + chr2_4:29970518-29970537 None:intergenic 60.0%
GAGGGAGTCAGCAGTGGGAT+TGG + chr2_4:29970622-29970641 None:intergenic 60.0%
GTTGCAGAGGGAGTCAGCAG+TGG + chr2_4:29970628-29970647 None:intergenic 60.0%
GCACTTCCAGGGGTTGCAGA+GGG + chr2_4:29970640-29970659 None:intergenic 60.0%
TGCACTTCCAGGGGTTGCAG+AGG + chr2_4:29970641-29970660 None:intergenic 60.0%
! TCTGCAACCCCTGGAAGTGC+AGG - chr2_4:29970640-29970659 Msa0324420:CDS 60.0%
GGAGTAAGGCCTGCACTTCC+AGG + chr2_4:29970652-29970671 None:intergenic 60.0%
!! AGTATGGCGCTGGCAAGGGA+TGG - chr2_4:29970679-29970698 Msa0324420:CDS 60.0%
AGAGATGCTGGAGGAGGCCT+AGG + chr2_4:29971030-29971049 None:intergenic 60.0%
TAGGCCTCCTCCAGCATCTC+TGG - chr2_4:29971029-29971048 Msa0324420:CDS 60.0%
AGCTCCAGAGATGCTGGAGG+AGG + chr2_4:29971036-29971055 None:intergenic 60.0%
CGTCGTCTTCACCAAGCCGC+AGG - chr2_4:29968859-29968878 Msa0324420:three_prime_UTR 65.0%
GGTCGCGCAGGCTTCGATTC+AGG + chr2_4:29969794-29969813 None:intergenic 65.0%
TCAACAGGATCGGGTCGCGC+AGG + chr2_4:29969806-29969825 None:intergenic 65.0%
CTGACTCCCTCTGCAACCCC+TGG - chr2_4:29970631-29970650 Msa0324420:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 29968791 29972570 29968791 ID=Msa0324420;Name=Msa0324420
chr2_4 mRNA 29968791 29972570 29968791 ID=Msa0324420-mRNA-1;Parent=Msa0324420;Name=Msa0324420-mRNA-1;_AED=0.04;_eAED=0.04;_QI=166|1|1|1|0.5|0.33|3|317|726
chr2_4 exon 29968791 29969404 29968791 ID=Msa0324420-mRNA-1:exon:10114;Parent=Msa0324420-mRNA-1
chr2_4 exon 29970068 29972027 29970068 ID=Msa0324420-mRNA-1:exon:10113;Parent=Msa0324420-mRNA-1
chr2_4 exon 29972481 29972570 29972481 ID=Msa0324420-mRNA-1:exon:10112;Parent=Msa0324420-mRNA-1
chr2_4 five_prime_UTR 29972481 29972570 29972481 ID=Msa0324420-mRNA-1:five_prime_utr;Parent=Msa0324420-mRNA-1
chr2_4 five_prime_UTR 29971952 29972027 29971952 ID=Msa0324420-mRNA-1:five_prime_utr;Parent=Msa0324420-mRNA-1
chr2_4 CDS 29970068 29971951 29970068 ID=Msa0324420-mRNA-1:cds;Parent=Msa0324420-mRNA-1
chr2_4 CDS 29969108 29969404 29969108 ID=Msa0324420-mRNA-1:cds;Parent=Msa0324420-mRNA-1
chr2_4 three_prime_UTR 29968791 29969107 29968791 ID=Msa0324420-mRNA-1:three_prime_utr;Parent=Msa0324420-mRNA-1
Gene Sequence

>Msa0324420

ATGAGCATAGGTGTTTGGACAAACACCGAGGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGTAAAAATCAGTGGGCTCATATCTCGTCCCTACTCGTTTGCAAATCTGCAGAACGGTGTAAAGCTCGTTGGTATGAGTGGTTAGATCCTTCCATTAAGAAGACTGAGTGGACTCGAGAAGAGGATGAGAAGCTACTTCATCTTGCTAAGCTTACGCCTACTCAGTGGAGAACCATTAGTGATACCATTGTGGGTCGTACTCCTTCGCAGTGTCTTGAACGGTATGAGAAACTCCTTGACGCCACTTGTGTTAAGGACGATAACTATGAACCTGGTGATGACCCTAGGAAATTGCGTCCAGGGGAGATTGATCCGAATCCTGAATCGAAGCCTGCGCGACCCGATCCTGTTGATATGGATGAGTATGAGAAGGAGATGCTTTCCGAAGCATGTGCTCGGTTGGCTAACACGAAAGGTAAAAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCAAGGAGGCTTGCTTCTTTACAGAAAAAGAGAGAATTGAAGGCTGCTGGGATTGATATAAGGCAGCGGAGGAGGAAAAGGAGAGGGATTGATTATAATGCAGAAATTCCGTTTGAGAAAAGGCCTCCTTTGGGTTATTTTGATGTTGCTGATGAGGATAGGGAGGTGGAGCAGCATGCATTCCCTACTACTATAGAAGAACTTGAGGGGAAAAGAAGGATTGATGTTGAGGCTCAGTTGAGAAAGCAAGACGTTGCAAGGAATAAAATTGCAGAGAGGCAAGATGCCCCGGCTGCTATTCTGCATGCCAAGAAGCTGAATGACCCAGAAACAGTTGGAAAGAGATCAAAACTGATGCTTCCACCACCTCAGATTTCCGATCAAGAATTGGATGAAATTGCCAAGTTGGGTTATGCCAGTGACCTTGTGGGCAGCAATGAACTCACCGAAGGCAGCAGTGCTACTCGTGCTCTTCTCCCTAATTATCCACAGACACCCAACCAAGCCTTGACTCCTTTAAGAACTCCTCAGAGAACACCAGCTAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCCAGGCTGAGGGAGTCTCAGACACCACTGTTAGGAGGAGAGAACCTGGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAAATTCACATTCCAATCCCACTGCTGACTCCCTCTGCAACCCCTGGAAGTGCAGGCCTTACTCCCAGAAGTAGTATGGCGCTGGCAAGGGATGGTTTTTCTTTTGGCATGACTACGAAGGGAACTCCTCTCAGGGATGAGCTACATATCAATGAAGATATGGAGATGCGTGATAGTGCTAGGCTCGAGCTACAGAGACAAGCTGATATGAAAAAAAGTCTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCTAAAAATGAGTACCAGATAGTGATGCAACCAATTCAAGAAGATGCTGAAGAGCCCGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATGGCTAGAGAAAAGGCAGAAGAAGAGGCACGGCAGAAGGCGTTACTTAGAAAACGATCAAAAGTCATTCAAAGGGAACTTCCTAGGCCTCCTCCAGCATCTCTGGAGCTTATTAGGAACTCCTTGATAAGAGCTGACGGAGACAAAAGTTCATTTGTTCCACCAACCCCTATTGAGCAAGCCGACGAGATGATAAGAAAGGAGCTTCCAGCCTTACTGGAGCATGACAATGCTAAGTATCCGCTTGAGGAGATAGCAAATAAGGAGAGAGAGAAAGGATCCAAACGAGCAGCAAATGGGCCTGCTATCCCTGTCATAGAAGATTATCAGGAGGACGAGATGAAATCTGCTGATCAGTTGATAAAAGATGAAGCCCAGTATCTTCGTGAGGCAATGGGGCATGAAAATGATTCCCTCGAGGATTTTGTTGAAGCACATACAACATGCATTAATGATTTAATGTACTTTGATACCCGTAACACACATGGTCTATCAAGTGTTGCTGGAAACGCAGAGAAGCTAGCAGCTTTGCAGAATGAATTTGAGAATGTGAGAAGTAAGCTGGATGATGGGAAGGAGAAGATGATTCGACTTGAGAAGAAGGTTACATTACTCACGCAAGGGTACGAGTTATGCTACTGCTAA
Protein sequence

>Msa0324420

MSIGVWTNTEDEILKAAVMKYGKNQWAHISSLLVCKSAERCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLTPTQWRTISDTIVGRTPSQCLERYEKLLDATCVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEYEKEMLSEACARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRRGIDYNAEIPFEKRPPLGYFDVADEDREVEQHAFPTTIEELEGKRRIDVEAQLRKQDVARNKIAERQDAPAAILHAKKLNDPETVGKRSKLMLPPPQISDQELDEIAKLGYASDLVGSNELTEGSSATRALLPNYPQTPNQALTPLRTPQRTPASKGDAIMMEAENLARLRESQTPLLGGENLELHPSDFSGVTPKKKEIHIPIPLLTPSATPGSAGLTPRSSMALARDGFSFGMTTKGTPLRDELHINEDMEMRDSARLELQRQADMKKSLRSGLSSLPQPKNEYQIVMQPIQEDAEEPEEKIEEDMSDRMAREKAEEEARQKALLRKRSKVIQRELPRPPPASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELPALLEHDNAKYPLEEIANKEREKGSKRAANGPAIPVIEDYQEDEMKSADQLIKDEAQYLREAMGHENDSLEDFVEAHTTCINDLMYFDTRNTHGLSSVAGNAEKLAALQNEFENVRSKLDDGKEKMIRLEKKVTLLTQGYELCYC*