AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0328060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0328060 MtrunA17_Chr2g0291501 89.759 166 17 0 115 280 388 553 1.44e-102 320
Msa0328060 MtrunA17_Chr2g0282771 95.575 113 4 1 1 112 1 113 5.08e-64 218
Msa0328060 MtrunA17_Chr2g0283061 45.963 161 84 3 116 274 316 475 2.25e-39 143
Msa0328060 MtrunA17_Chr2g0283111 47.500 160 81 3 116 273 369 527 5.05e-39 145
Msa0328060 MtrunA17_Chr4g0046591 75.904 83 18 1 26 108 18 98 6.87e-33 128
Msa0328060 MtrunA17_Chr8g0369211 45.283 159 81 5 115 271 387 541 5.33e-32 125
Msa0328060 MtrunA17_Chr8g0369231 40.556 180 96 7 115 288 33 207 5.26e-29 116
Msa0328060 MtrunA17_Chr4g0040511 68.750 64 20 0 36 99 16 79 6.18e-22 96.3
Msa0328060 MtrunA17_Chr5g0441991 51.724 58 28 0 41 98 20 77 6.63e-14 71.6
Msa0328060 MtrunA17_Chr3g0094681 49.091 55 28 0 42 96 21 75 9.24e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0328060 AT5G49760.1 45.062 162 85 3 114 274 387 545 4.16e-39 146
Msa0328060 AT1G79620.1 45.000 160 81 5 115 271 395 550 2.39e-30 120
Msa0328060 AT1G79620.2 45.000 160 81 5 115 271 395 550 3.68e-30 120
Msa0328060 AT1G79620.3 45.000 160 81 5 115 271 395 550 3.92e-30 120
Msa0328060 AT1G79620.5 45.283 159 80 5 116 271 422 576 4.97e-30 120
Msa0328060 AT1G79620.4 44.654 159 81 4 116 271 422 576 1.13e-29 119
Msa0328060 AT5G49770.1 40.237 169 94 6 114 278 390 555 7.49e-27 110
Msa0328060 AT1G28420.1 78.462 65 14 0 33 97 33 97 1.60e-26 110
Msa0328060 AT5G49780.1 32.018 228 142 5 49 274 215 431 8.67e-26 107
Msa0328060 AT5G49780.3 32.018 228 142 5 49 274 336 552 9.15e-26 107
Msa0328060 AT5G49780.2 32.018 228 142 5 49 274 336 552 9.75e-26 107
Msa0328060 AT5G44180.2 68.333 60 19 0 37 96 15 74 1.88e-19 89.4
Msa0328060 AT5G44180.3 68.333 60 19 0 37 96 15 74 2.09e-19 89.0
Msa0328060 AT5G44180.1 68.333 60 19 0 37 96 15 74 2.09e-19 89.0
Msa0328060 AT4G03250.1 36.000 100 59 2 42 141 22 116 8.64e-13 68.9

Find 75 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATAGAACCGGGATTTC+TGG 0.136088 2_4:+40225605 Msa0328060:CDS
GGTATGCACATTTGCATTTC+GGG 0.197023 2_4:-40225376 None:intergenic
GCGCCACCTTTGCTGGATTC+TGG 0.216776 2_4:+40224592 Msa0328060:CDS
TTCGTTTAACTCCACTTTCT+TGG 0.254588 2_4:-40225262 None:intergenic
CAGGAGGAGGCTTGTATGTT+TGG 0.285442 2_4:-40225649 None:intergenic
GGGTATGCACATTTGCATTT+CGG 0.291426 2_4:-40225377 None:intergenic
GCGAAAGGCGCCACCTTTGC+TGG 0.311681 2_4:+40224585 Msa0328060:CDS
GCAACACAACACAATAATTA+AGG 0.324273 2_4:-40224070 None:intergenic
AGAGTGAACGTTCCTGTATA+AGG 0.330597 2_4:-40225398 None:intergenic
ACTCCACTTTCTTGGCAAAC+TGG 0.336139 2_4:-40225254 None:intergenic
GAAAGATTCGGTTATGTGTA+TGG 0.345157 2_4:+40225721 Msa0328060:CDS
CAAGATTCTTTCAATAGAAC+CGG 0.347444 2_4:+40225596 Msa0328060:CDS
CAAGACAGTGTTTGCAATGC+TGG 0.347812 2_4:+40225451 Msa0328060:CDS
TTTCGTGAAAGTCAAGGAAT+AGG 0.373824 2_4:-40223982 None:intergenic
AACAACAAGATTATGAGTTC+AGG 0.378782 2_4:+40224248 Msa0328060:CDS
ATATCACCAATGAAATAAAA+TGG 0.382032 2_4:-40225683 None:intergenic
TCAAGCATTTCAAGCTGAAA+AGG 0.383787 2_4:-40224308 None:intergenic
GTCTGAGAAGTTGGGGTTGT+CGG 0.388162 2_4:+40224492 Msa0328060:CDS
TACTGATATGCATTCTTCCT+TGG 0.397197 2_4:-40225539 None:intergenic
AGCTCCTTCTTTCTCAGACT+TGG 0.399594 2_4:+40225424 Msa0328060:CDS
CAAGCATTTCAAGCTGAAAA+GGG 0.399966 2_4:-40224307 None:intergenic
GATAGGGCTGTCTGAGAAGT+TGG 0.405145 2_4:+40224483 Msa0328060:CDS
TGATCACTATTTGAAAGATT+CGG 0.407796 2_4:+40225709 Msa0328060:CDS
CCTTCTTGTCTTTCAACCTC+CGG 0.426074 2_4:-40224543 None:intergenic
TTTGTGGCTGGTGGAATCTA+GGG 0.432206 2_4:+40224106 Msa0328060:five_prime_UTR
ATAGGGCTGTCTGAGAAGTT+GGG 0.440544 2_4:+40224484 Msa0328060:CDS
AAAGATTCGGTTATGTGTAT+GGG 0.450263 2_4:+40225722 Msa0328060:CDS
GCTCCTTCTTTCTCAGACTT+GGG 0.455275 2_4:+40225425 Msa0328060:CDS
AATTCCCAGAAGGGTGATGA+TGG 0.465278 2_4:+40224188 Msa0328060:CDS
TGGAATCTAGGGTTTGAAAA+GGG 0.466684 2_4:+40224117 Msa0328060:five_prime_UTR
TTCAGTGGAGACATATCCTT+CGG 0.476034 2_4:+40224450 Msa0328060:intron
CGGAGTTGTATATGTGTCGT+TGG 0.478918 2_4:-40225306 None:intergenic
AGTTTAGAAATATTTCCATC+AGG 0.482021 2_4:+40225572 Msa0328060:CDS
AAAAGAATAATAATTATTAA+CGG 0.486539 2_4:-40223951 None:intergenic
GAGTGAACGTTCCTGTATAA+GGG 0.487309 2_4:-40225397 None:intergenic
GAAGGAGTTAGCGGTTAAGA+AGG 0.490942 2_4:+40224561 Msa0328060:CDS
TTGAAAGAATCTTGACCTGA+TGG 0.497148 2_4:-40225587 None:intergenic
ACCGGCACACAGTTGTTTAG+CGG 0.500536 2_4:-40225326 None:intergenic
CTTAAAGAAACTGAATCCAC+AGG 0.509575 2_4:-40225512 None:intergenic
TTTCCCAAGTCTGAGAAAGA+AGG 0.511304 2_4:-40225428 None:intergenic
AATCCAGTTTGCCAAGAAAG+TGG 0.511405 2_4:+40225251 Msa0328060:CDS
GGAATCTAGGGTTTGAAAAG+GGG 0.512539 2_4:+40224118 Msa0328060:five_prime_UTR
AAATCCTATGCCAGAAATCC+CGG 0.515417 2_4:-40225615 None:intergenic
AAATGTGCATACCCTTATAC+AGG 0.517777 2_4:+40225386 Msa0328060:CDS
CCTTCGGAGACAACAAGGAT+AGG 0.523430 2_4:+40224466 Msa0328060:CDS
GTGGAATCTAGGGTTTGAAA+AGG 0.524133 2_4:+40224116 Msa0328060:five_prime_UTR
ATTCCCAGAAGGGTGATGAT+GGG 0.552822 2_4:+40224189 Msa0328060:CDS
CCTATCCTTGTTGTCTCCGA+AGG 0.560825 2_4:-40224466 None:intergenic
GCCATTCAATTCTATCGACA+TGG 0.562139 2_4:-40225750 None:intergenic
TCCGCTAAACAACTGTGTGC+CGG 0.565610 2_4:+40225325 Msa0328060:CDS
AGTAATGAAAATTTCAACAA+TGG 0.570399 2_4:+40224221 Msa0328060:CDS
CTTCGGAGACAACAAGGATA+GGG 0.579167 2_4:+40224467 Msa0328060:CDS
TTCCCAGAAGGGTGATGATG+GGG 0.582040 2_4:+40224190 Msa0328060:CDS
AGCGGTTAAGAAGGCGCGAA+AGG 0.582957 2_4:+40224570 Msa0328060:CDS
AAGATTCTTTCAATAGAACC+GGG 0.589394 2_4:+40225597 Msa0328060:CDS
ATCTAGGGTTTGAAAAGGGG+AGG 0.590406 2_4:+40224121 Msa0328060:five_prime_UTR
CAGTTTCTTTAAGCAATCCA+AGG 0.591494 2_4:+40225522 Msa0328060:CDS
AATGCTGGAATTTACTCTGA+TGG 0.591697 2_4:+40225466 Msa0328060:CDS
TAGGGCTGTCTGAGAAGTTG+GGG 0.592802 2_4:+40224485 Msa0328060:CDS
TAGACTTCATGAGAAACCTG+TGG 0.593969 2_4:+40225496 Msa0328060:CDS
GAAAGACAAGAAGGAGTTAG+CGG 0.595849 2_4:+40224552 Msa0328060:CDS
GCAGAGAATAATTCCCAGAA+GGG 0.596544 2_4:+40224179 Msa0328060:CDS
GCTCCAGAATCCAGCAAAGG+TGG 0.596648 2_4:-40224595 None:intergenic
CGGATCGACAGTTACAGATG+TGG 0.596696 2_4:+40224512 Msa0328060:CDS
AAGCATTTCAAGCTGAAAAG+GGG 0.602993 2_4:-40224306 None:intergenic
AAGATTCGGTTATGTGTATG+GGG 0.604149 2_4:+40225723 Msa0328060:CDS
AGAATAATAATTATTAACGG+TGG 0.604429 2_4:-40223948 None:intergenic
AGAACCGGGATTTCTGGCAT+AGG 0.608660 2_4:+40225611 Msa0328060:CDS
AGCAGAGAATAATTCCCAGA+AGG 0.615412 2_4:+40224178 Msa0328060:CDS
CATATCCTTCGGAGACAACA+AGG 0.621717 2_4:+40224461 Msa0328060:CDS
AAGATTATGAGTTCAGGTGA+AGG 0.636764 2_4:+40224254 Msa0328060:CDS
CCGGAGGTTGAAAGACAAGA+AGG 0.646614 2_4:+40224543 Msa0328060:CDS
TCCCAGAAGGGTGATGATGG+GGG 0.649850 2_4:+40224191 Msa0328060:CDS
TCCATGTCGATAGAATTGAA+TGG 0.659972 2_4:+40225749 Msa0328060:CDS
AAGGCTCCAGAATCCAGCAA+AGG 0.677006 2_4:-40224598 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTTTTAAGTTTATGATTT+TGG + chr2_4:40224385-40224404 Msa0328060:intron 15.0%
!!! TTGTTTTAAGTTTATGATTT+TGG + chr2_4:40224385-40224404 Msa0328060:intron 15.0%
!! AGAATAATAATTATTAACGG+TGG - chr2_4:40223951-40223970 None:intergenic 20.0%
!! AGTAATGAAAATTTCAACAA+TGG + chr2_4:40224221-40224240 Msa0328060:CDS 20.0%
!!! TAAGTTTATGATTTTGGTTA+TGG + chr2_4:40224391-40224410 Msa0328060:intron 20.0%
!!! AAGTTTATGATTTTGGTTAT+GGG + chr2_4:40224392-40224411 Msa0328060:intron 20.0%
!!! TTTTTTTTTGTGAATTTCAG+TGG + chr2_4:40224435-40224454 Msa0328060:intron 20.0%
!!! TGTATCTATTAATTTGAAAC+AGG + chr2_4:40224772-40224791 Msa0328060:intron 20.0%
!!! GTATCTATTAATTTGAAACA+GGG + chr2_4:40224773-40224792 Msa0328060:intron 20.0%
!! TATAATAACAAAGATGAAAC+AGG - chr2_4:40224966-40224985 None:intergenic 20.0%
!! CTGAAAAACAATAATTTGAA+TGG + chr2_4:40225031-40225050 Msa0328060:intron 20.0%
!! TGAAATTAACTGCTATAATA+TGG - chr2_4:40225174-40225193 None:intergenic 20.0%
!! ATATCACCAATGAAATAAAA+TGG - chr2_4:40225686-40225705 None:intergenic 20.0%
!! AGAATAATAATTATTAACGG+TGG - chr2_4:40223951-40223970 None:intergenic 20.0%
!! AGTAATGAAAATTTCAACAA+TGG + chr2_4:40224221-40224240 Msa0328060:CDS 20.0%
!!! TAAGTTTATGATTTTGGTTA+TGG + chr2_4:40224391-40224410 Msa0328060:intron 20.0%
!!! AAGTTTATGATTTTGGTTAT+GGG + chr2_4:40224392-40224411 Msa0328060:intron 20.0%
!!! TTTTTTTTTGTGAATTTCAG+TGG + chr2_4:40224435-40224454 Msa0328060:intron 20.0%
!!! TGTATCTATTAATTTGAAAC+AGG + chr2_4:40224772-40224791 Msa0328060:intron 20.0%
!!! GTATCTATTAATTTGAAACA+GGG + chr2_4:40224773-40224792 Msa0328060:intron 20.0%
!! TATAATAACAAAGATGAAAC+AGG - chr2_4:40224966-40224985 None:intergenic 20.0%
!! CTGAAAAACAATAATTTGAA+TGG + chr2_4:40225031-40225050 Msa0328060:intron 20.0%
!! TGAAATTAACTGCTATAATA+TGG - chr2_4:40225174-40225193 None:intergenic 20.0%
!! ATATCACCAATGAAATAAAA+TGG - chr2_4:40225686-40225705 None:intergenic 20.0%
! CAAATTTGAAGAAGAAAAGA+AGG - chr2_4:40224355-40224374 None:intergenic 25.0%
! TTCACGTATATAAAGAAAAG+TGG + chr2_4:40224688-40224707 Msa0328060:intron 25.0%
! TGTTACATTACATGATTCAT+AGG + chr2_4:40225005-40225024 Msa0328060:intron 25.0%
!! TTAAATTAGTCTGCAAATCA+AGG - chr2_4:40225099-40225118 None:intergenic 25.0%
!! AGATTTTTAATGCATTCAAC+CGG - chr2_4:40225347-40225366 None:intergenic 25.0%
! AGTTTAGAAATATTTCCATC+AGG + chr2_4:40225572-40225591 Msa0328060:CDS 25.0%
!!! TTTGGACCATTTTATTTCAT+TGG + chr2_4:40225677-40225696 Msa0328060:CDS 25.0%
! TGATCACTATTTGAAAGATT+CGG + chr2_4:40225709-40225728 Msa0328060:CDS 25.0%
! CAAATTTGAAGAAGAAAAGA+AGG - chr2_4:40224355-40224374 None:intergenic 25.0%
! TTCACGTATATAAAGAAAAG+TGG + chr2_4:40224688-40224707 Msa0328060:intron 25.0%
! TGTTACATTACATGATTCAT+AGG + chr2_4:40225005-40225024 Msa0328060:intron 25.0%
!! TTAAATTAGTCTGCAAATCA+AGG - chr2_4:40225099-40225118 None:intergenic 25.0%
!! AGATTTTTAATGCATTCAAC+CGG - chr2_4:40225347-40225366 None:intergenic 25.0%
! AGTTTAGAAATATTTCCATC+AGG + chr2_4:40225572-40225591 Msa0328060:CDS 25.0%
!!! TTTGGACCATTTTATTTCAT+TGG + chr2_4:40225677-40225696 Msa0328060:CDS 25.0%
! TGATCACTATTTGAAAGATT+CGG + chr2_4:40225709-40225728 Msa0328060:CDS 25.0%
! CAAAATTTTCGTGAAAGTCA+AGG - chr2_4:40223991-40224010 None:intergenic 30.0%
GCAACACAACACAATAATTA+AGG - chr2_4:40224073-40224092 None:intergenic 30.0%
AAAAATTCGATCTTGATCGA+TGG + chr2_4:40224148-40224167 Msa0328060:exon 30.0%
AACAACAAGATTATGAGTTC+AGG + chr2_4:40224248-40224267 Msa0328060:CDS 30.0%
AAAATAACAAAAACTCCGTC+CGG - chr2_4:40224670-40224689 None:intergenic 30.0%
!! ACTCCTTATTAATTTGCCTT+GGG - chr2_4:40224728-40224747 None:intergenic 30.0%
!! TACTCCTTATTAATTTGCCT+TGG - chr2_4:40224729-40224748 None:intergenic 30.0%
TTGAAACAGGGCTTATATTT+AGG + chr2_4:40224785-40224804 Msa0328060:intron 30.0%
TGAAACAGGGCTTATATTTA+GGG + chr2_4:40224786-40224805 Msa0328060:intron 30.0%
GTGTTTATAATTAGAGACAG+AGG + chr2_4:40224831-40224850 Msa0328060:intron 30.0%
! ACTTTTGACAAATCTACCTT+AGG + chr2_4:40224863-40224882 Msa0328060:intron 30.0%
TTGAATGGCACTTTAGATAT+TGG + chr2_4:40225046-40225065 Msa0328060:intron 30.0%
! ACTTTAGAGACATCAATTTG+TGG - chr2_4:40225136-40225155 None:intergenic 30.0%
! ACAAATTGATGTCTCTAAAG+TGG + chr2_4:40225135-40225154 Msa0328060:intron 30.0%
CAAGATTCTTTCAATAGAAC+CGG + chr2_4:40225596-40225615 Msa0328060:CDS 30.0%
AAGATTCTTTCAATAGAACC+GGG + chr2_4:40225597-40225616 Msa0328060:CDS 30.0%
TAAAATGGTCCAAAAAGTTC+AGG - chr2_4:40225671-40225690 None:intergenic 30.0%
! AAAGATTCGGTTATGTGTAT+GGG + chr2_4:40225722-40225741 Msa0328060:CDS 30.0%
! CAAAATTTTCGTGAAAGTCA+AGG - chr2_4:40223991-40224010 None:intergenic 30.0%
GCAACACAACACAATAATTA+AGG - chr2_4:40224073-40224092 None:intergenic 30.0%
AAAAATTCGATCTTGATCGA+TGG + chr2_4:40224148-40224167 Msa0328060:exon 30.0%
AACAACAAGATTATGAGTTC+AGG + chr2_4:40224248-40224267 Msa0328060:CDS 30.0%
AAAATAACAAAAACTCCGTC+CGG - chr2_4:40224670-40224689 None:intergenic 30.0%
!! ACTCCTTATTAATTTGCCTT+GGG - chr2_4:40224728-40224747 None:intergenic 30.0%
!! TACTCCTTATTAATTTGCCT+TGG - chr2_4:40224729-40224748 None:intergenic 30.0%
TTGAAACAGGGCTTATATTT+AGG + chr2_4:40224785-40224804 Msa0328060:intron 30.0%
TGAAACAGGGCTTATATTTA+GGG + chr2_4:40224786-40224805 Msa0328060:intron 30.0%
GTGTTTATAATTAGAGACAG+AGG + chr2_4:40224831-40224850 Msa0328060:intron 30.0%
! ACTTTTGACAAATCTACCTT+AGG + chr2_4:40224863-40224882 Msa0328060:intron 30.0%
TTGAATGGCACTTTAGATAT+TGG + chr2_4:40225046-40225065 Msa0328060:intron 30.0%
! ACTTTAGAGACATCAATTTG+TGG - chr2_4:40225136-40225155 None:intergenic 30.0%
! ACAAATTGATGTCTCTAAAG+TGG + chr2_4:40225135-40225154 Msa0328060:intron 30.0%
CAAGATTCTTTCAATAGAAC+CGG + chr2_4:40225596-40225615 Msa0328060:CDS 30.0%
AAGATTCTTTCAATAGAACC+GGG + chr2_4:40225597-40225616 Msa0328060:CDS 30.0%
TAAAATGGTCCAAAAAGTTC+AGG - chr2_4:40225671-40225690 None:intergenic 30.0%
! AAAGATTCGGTTATGTGTAT+GGG + chr2_4:40225722-40225741 Msa0328060:CDS 30.0%
TTTCGTGAAAGTCAAGGAAT+AGG - chr2_4:40223985-40224004 None:intergenic 35.0%
! TGGAATCTAGGGTTTGAAAA+GGG + chr2_4:40224117-40224136 Msa0328060:five_prime_UTR 35.0%
AAGATTATGAGTTCAGGTGA+AGG + chr2_4:40224254-40224273 Msa0328060:CDS 35.0%
AAGCATTTCAAGCTGAAAAG+GGG - chr2_4:40224309-40224328 None:intergenic 35.0%
CAAGCATTTCAAGCTGAAAA+GGG - chr2_4:40224310-40224329 None:intergenic 35.0%
TCAAGCATTTCAAGCTGAAA+AGG - chr2_4:40224311-40224330 None:intergenic 35.0%
CCTTGTAATGAATATGGATC+CGG + chr2_4:40224617-40224636 Msa0328060:intron 35.0%
CTTGTAATGAATATGGATCC+GGG + chr2_4:40224618-40224637 Msa0328060:intron 35.0%
AAATAACAAAAACTCCGTCC+GGG - chr2_4:40224669-40224688 None:intergenic 35.0%
TCTCCCAAGGCAAATTAATA+AGG + chr2_4:40224722-40224741 Msa0328060:intron 35.0%
CATCATTAATCCTCATCCTA+AGG - chr2_4:40224882-40224901 None:intergenic 35.0%
TGATGCTAACAAAACCTTAC+AGG + chr2_4:40224897-40224916 Msa0328060:intron 35.0%
GATGCTAACAAAACCTTACA+GGG + chr2_4:40224898-40224917 Msa0328060:intron 35.0%
TAAAGTTTGAGAACCCTGTA+AGG - chr2_4:40224914-40224933 None:intergenic 35.0%
TTCGTTTAACTCCACTTTCT+TGG - chr2_4:40225265-40225284 None:intergenic 35.0%
AAATGTGCATACCCTTATAC+AGG + chr2_4:40225386-40225405 Msa0328060:CDS 35.0%
AATGCTGGAATTTACTCTGA+TGG + chr2_4:40225466-40225485 Msa0328060:CDS 35.0%
CTTAAAGAAACTGAATCCAC+AGG - chr2_4:40225515-40225534 None:intergenic 35.0%
CAGTTTCTTTAAGCAATCCA+AGG + chr2_4:40225522-40225541 Msa0328060:CDS 35.0%
TACTGATATGCATTCTTCCT+TGG - chr2_4:40225542-40225561 None:intergenic 35.0%
TTGAAAGAATCTTGACCTGA+TGG - chr2_4:40225590-40225609 None:intergenic 35.0%
! GAAAGATTCGGTTATGTGTA+TGG + chr2_4:40225721-40225740 Msa0328060:CDS 35.0%
! AAGATTCGGTTATGTGTATG+GGG + chr2_4:40225723-40225742 Msa0328060:CDS 35.0%
TCCATGTCGATAGAATTGAA+TGG + chr2_4:40225749-40225768 Msa0328060:CDS 35.0%
TTTCGTGAAAGTCAAGGAAT+AGG - chr2_4:40223985-40224004 None:intergenic 35.0%
! TGGAATCTAGGGTTTGAAAA+GGG + chr2_4:40224117-40224136 Msa0328060:five_prime_UTR 35.0%
AAGATTATGAGTTCAGGTGA+AGG + chr2_4:40224254-40224273 Msa0328060:CDS 35.0%
AAGCATTTCAAGCTGAAAAG+GGG - chr2_4:40224309-40224328 None:intergenic 35.0%
CAAGCATTTCAAGCTGAAAA+GGG - chr2_4:40224310-40224329 None:intergenic 35.0%
TCAAGCATTTCAAGCTGAAA+AGG - chr2_4:40224311-40224330 None:intergenic 35.0%
CCTTGTAATGAATATGGATC+CGG + chr2_4:40224617-40224636 Msa0328060:intron 35.0%
CTTGTAATGAATATGGATCC+GGG + chr2_4:40224618-40224637 Msa0328060:intron 35.0%
AAATAACAAAAACTCCGTCC+GGG - chr2_4:40224669-40224688 None:intergenic 35.0%
TCTCCCAAGGCAAATTAATA+AGG + chr2_4:40224722-40224741 Msa0328060:intron 35.0%
CATCATTAATCCTCATCCTA+AGG - chr2_4:40224882-40224901 None:intergenic 35.0%
TGATGCTAACAAAACCTTAC+AGG + chr2_4:40224897-40224916 Msa0328060:intron 35.0%
GATGCTAACAAAACCTTACA+GGG + chr2_4:40224898-40224917 Msa0328060:intron 35.0%
TAAAGTTTGAGAACCCTGTA+AGG - chr2_4:40224914-40224933 None:intergenic 35.0%
TTCGTTTAACTCCACTTTCT+TGG - chr2_4:40225265-40225284 None:intergenic 35.0%
AAATGTGCATACCCTTATAC+AGG + chr2_4:40225386-40225405 Msa0328060:CDS 35.0%
AATGCTGGAATTTACTCTGA+TGG + chr2_4:40225466-40225485 Msa0328060:CDS 35.0%
CTTAAAGAAACTGAATCCAC+AGG - chr2_4:40225515-40225534 None:intergenic 35.0%
CAGTTTCTTTAAGCAATCCA+AGG + chr2_4:40225522-40225541 Msa0328060:CDS 35.0%
TACTGATATGCATTCTTCCT+TGG - chr2_4:40225542-40225561 None:intergenic 35.0%
TTGAAAGAATCTTGACCTGA+TGG - chr2_4:40225590-40225609 None:intergenic 35.0%
! GAAAGATTCGGTTATGTGTA+TGG + chr2_4:40225721-40225740 Msa0328060:CDS 35.0%
! AAGATTCGGTTATGTGTATG+GGG + chr2_4:40225723-40225742 Msa0328060:CDS 35.0%
TCCATGTCGATAGAATTGAA+TGG + chr2_4:40225749-40225768 Msa0328060:CDS 35.0%
! TGCTTCGTGTTCTTCTTTTG+TGG + chr2_4:40224090-40224109 Msa0328060:five_prime_UTR 40.0%
! GTGGAATCTAGGGTTTGAAA+AGG + chr2_4:40224116-40224135 Msa0328060:five_prime_UTR 40.0%
! GGAATCTAGGGTTTGAAAAG+GGG + chr2_4:40224118-40224137 Msa0328060:five_prime_UTR 40.0%
AGCAGAGAATAATTCCCAGA+AGG + chr2_4:40224178-40224197 Msa0328060:CDS 40.0%
GCAGAGAATAATTCCCAGAA+GGG + chr2_4:40224179-40224198 Msa0328060:CDS 40.0%
! GGGGTTTTCATTTGTCTCTT+AGG - chr2_4:40224290-40224309 None:intergenic 40.0%
TTCAGTGGAGACATATCCTT+CGG + chr2_4:40224450-40224469 Msa0328060:intron 40.0%
!!! TACAGATGTGGTTTTGTCAC+CGG + chr2_4:40224524-40224543 Msa0328060:CDS 40.0%
GAAAGACAAGAAGGAGTTAG+CGG + chr2_4:40224552-40224571 Msa0328060:CDS 40.0%
! CTGGAGCCTTGTAATGAATA+TGG + chr2_4:40224611-40224630 Msa0328060:intron 40.0%
CCGGATCCATATTCATTACA+AGG - chr2_4:40224620-40224639 None:intergenic 40.0%
GACAAATCTACCTTAGGATG+AGG + chr2_4:40224869-40224888 Msa0328060:intron 40.0%
AATCCAGTTTGCCAAGAAAG+TGG + chr2_4:40225251-40225270 Msa0328060:CDS 40.0%
GGTATGCACATTTGCATTTC+GGG - chr2_4:40225379-40225398 None:intergenic 40.0%
GGGTATGCACATTTGCATTT+CGG - chr2_4:40225380-40225399 None:intergenic 40.0%
GAGTGAACGTTCCTGTATAA+GGG - chr2_4:40225400-40225419 None:intergenic 40.0%
AGAGTGAACGTTCCTGTATA+AGG - chr2_4:40225401-40225420 None:intergenic 40.0%
TTTCCCAAGTCTGAGAAAGA+AGG - chr2_4:40225431-40225450 None:intergenic 40.0%
TAGACTTCATGAGAAACCTG+TGG + chr2_4:40225496-40225515 Msa0328060:CDS 40.0%
TTCAATAGAACCGGGATTTC+TGG + chr2_4:40225605-40225624 Msa0328060:CDS 40.0%
AAATCCTATGCCAGAAATCC+CGG - chr2_4:40225618-40225637 None:intergenic 40.0%
AATGGTCCAAAAAGTTCAGG+AGG - chr2_4:40225668-40225687 None:intergenic 40.0%
GCCATTCAATTCTATCGACA+TGG - chr2_4:40225753-40225772 None:intergenic 40.0%
! TGCTTCGTGTTCTTCTTTTG+TGG + chr2_4:40224090-40224109 Msa0328060:five_prime_UTR 40.0%
! GTGGAATCTAGGGTTTGAAA+AGG + chr2_4:40224116-40224135 Msa0328060:five_prime_UTR 40.0%
! GGAATCTAGGGTTTGAAAAG+GGG + chr2_4:40224118-40224137 Msa0328060:five_prime_UTR 40.0%
AGCAGAGAATAATTCCCAGA+AGG + chr2_4:40224178-40224197 Msa0328060:CDS 40.0%
GCAGAGAATAATTCCCAGAA+GGG + chr2_4:40224179-40224198 Msa0328060:CDS 40.0%
! GGGGTTTTCATTTGTCTCTT+AGG - chr2_4:40224290-40224309 None:intergenic 40.0%
TTCAGTGGAGACATATCCTT+CGG + chr2_4:40224450-40224469 Msa0328060:intron 40.0%
!!! TACAGATGTGGTTTTGTCAC+CGG + chr2_4:40224524-40224543 Msa0328060:CDS 40.0%
GAAAGACAAGAAGGAGTTAG+CGG + chr2_4:40224552-40224571 Msa0328060:CDS 40.0%
! CTGGAGCCTTGTAATGAATA+TGG + chr2_4:40224611-40224630 Msa0328060:intron 40.0%
CCGGATCCATATTCATTACA+AGG - chr2_4:40224620-40224639 None:intergenic 40.0%
GACAAATCTACCTTAGGATG+AGG + chr2_4:40224869-40224888 Msa0328060:intron 40.0%
AATCCAGTTTGCCAAGAAAG+TGG + chr2_4:40225251-40225270 Msa0328060:CDS 40.0%
GGTATGCACATTTGCATTTC+GGG - chr2_4:40225379-40225398 None:intergenic 40.0%
GGGTATGCACATTTGCATTT+CGG - chr2_4:40225380-40225399 None:intergenic 40.0%
GAGTGAACGTTCCTGTATAA+GGG - chr2_4:40225400-40225419 None:intergenic 40.0%
AGAGTGAACGTTCCTGTATA+AGG - chr2_4:40225401-40225420 None:intergenic 40.0%
TTTCCCAAGTCTGAGAAAGA+AGG - chr2_4:40225431-40225450 None:intergenic 40.0%
TAGACTTCATGAGAAACCTG+TGG + chr2_4:40225496-40225515 Msa0328060:CDS 40.0%
TTCAATAGAACCGGGATTTC+TGG + chr2_4:40225605-40225624 Msa0328060:CDS 40.0%
AAATCCTATGCCAGAAATCC+CGG - chr2_4:40225618-40225637 None:intergenic 40.0%
AATGGTCCAAAAAGTTCAGG+AGG - chr2_4:40225668-40225687 None:intergenic 40.0%
GCCATTCAATTCTATCGACA+TGG - chr2_4:40225753-40225772 None:intergenic 40.0%
! TCGTGTTCTTCTTTTGTGGC+TGG + chr2_4:40224094-40224113 Msa0328060:five_prime_UTR 45.0%
! TGTTCTTCTTTTGTGGCTGG+TGG + chr2_4:40224097-40224116 Msa0328060:five_prime_UTR 45.0%
! TTTTGTGGCTGGTGGAATCT+AGG + chr2_4:40224105-40224124 Msa0328060:five_prime_UTR 45.0%
TTTGTGGCTGGTGGAATCTA+GGG + chr2_4:40224106-40224125 Msa0328060:five_prime_UTR 45.0%
! ATCTAGGGTTTGAAAAGGGG+AGG + chr2_4:40224121-40224140 Msa0328060:five_prime_UTR 45.0%
AATTCCCAGAAGGGTGATGA+TGG + chr2_4:40224188-40224207 Msa0328060:CDS 45.0%
ATTCCCAGAAGGGTGATGAT+GGG + chr2_4:40224189-40224208 Msa0328060:CDS 45.0%
CATATCCTTCGGAGACAACA+AGG + chr2_4:40224461-40224480 Msa0328060:CDS 45.0%
CTTCGGAGACAACAAGGATA+GGG + chr2_4:40224467-40224486 Msa0328060:CDS 45.0%
ATAGGGCTGTCTGAGAAGTT+GGG + chr2_4:40224484-40224503 Msa0328060:CDS 45.0%
CCTTCTTGTCTTTCAACCTC+CGG - chr2_4:40224546-40224565 None:intergenic 45.0%
GAAGGAGTTAGCGGTTAAGA+AGG + chr2_4:40224561-40224580 Msa0328060:CDS 45.0%
AATGAATATGGATCCGGGTC+AGG + chr2_4:40224623-40224642 Msa0328060:intron 45.0%
TGCCTTGGGAGATAAAACAC+TGG - chr2_4:40224714-40224733 None:intergenic 45.0%
ACAGCCATTAGTGACCAACT+GGG + chr2_4:40225070-40225089 Msa0328060:intron 45.0%
ACTCCACTTTCTTGGCAAAC+TGG - chr2_4:40225257-40225276 None:intergenic 45.0%
CGGAGTTGTATATGTGTCGT+TGG - chr2_4:40225309-40225328 None:intergenic 45.0%
AGCTCCTTCTTTCTCAGACT+TGG + chr2_4:40225424-40225443 Msa0328060:CDS 45.0%
GCTCCTTCTTTCTCAGACTT+GGG + chr2_4:40225425-40225444 Msa0328060:CDS 45.0%
CAAGACAGTGTTTGCAATGC+TGG + chr2_4:40225451-40225470 Msa0328060:CDS 45.0%
! AAGCCTCCTCCTGAACTTTT+TGG + chr2_4:40225659-40225678 Msa0328060:CDS 45.0%
! TCGTGTTCTTCTTTTGTGGC+TGG + chr2_4:40224094-40224113 Msa0328060:five_prime_UTR 45.0%
! TGTTCTTCTTTTGTGGCTGG+TGG + chr2_4:40224097-40224116 Msa0328060:five_prime_UTR 45.0%
! TTTTGTGGCTGGTGGAATCT+AGG + chr2_4:40224105-40224124 Msa0328060:five_prime_UTR 45.0%
TTTGTGGCTGGTGGAATCTA+GGG + chr2_4:40224106-40224125 Msa0328060:five_prime_UTR 45.0%
! ATCTAGGGTTTGAAAAGGGG+AGG + chr2_4:40224121-40224140 Msa0328060:five_prime_UTR 45.0%
AATTCCCAGAAGGGTGATGA+TGG + chr2_4:40224188-40224207 Msa0328060:CDS 45.0%
ATTCCCAGAAGGGTGATGAT+GGG + chr2_4:40224189-40224208 Msa0328060:CDS 45.0%
CATATCCTTCGGAGACAACA+AGG + chr2_4:40224461-40224480 Msa0328060:CDS 45.0%
CTTCGGAGACAACAAGGATA+GGG + chr2_4:40224467-40224486 Msa0328060:CDS 45.0%
ATAGGGCTGTCTGAGAAGTT+GGG + chr2_4:40224484-40224503 Msa0328060:CDS 45.0%
CCTTCTTGTCTTTCAACCTC+CGG - chr2_4:40224546-40224565 None:intergenic 45.0%
GAAGGAGTTAGCGGTTAAGA+AGG + chr2_4:40224561-40224580 Msa0328060:CDS 45.0%
AATGAATATGGATCCGGGTC+AGG + chr2_4:40224623-40224642 Msa0328060:intron 45.0%
TGCCTTGGGAGATAAAACAC+TGG - chr2_4:40224714-40224733 None:intergenic 45.0%
ACAGCCATTAGTGACCAACT+GGG + chr2_4:40225070-40225089 Msa0328060:intron 45.0%
ACTCCACTTTCTTGGCAAAC+TGG - chr2_4:40225257-40225276 None:intergenic 45.0%
CGGAGTTGTATATGTGTCGT+TGG - chr2_4:40225309-40225328 None:intergenic 45.0%
AGCTCCTTCTTTCTCAGACT+TGG + chr2_4:40225424-40225443 Msa0328060:CDS 45.0%
GCTCCTTCTTTCTCAGACTT+GGG + chr2_4:40225425-40225444 Msa0328060:CDS 45.0%
CAAGACAGTGTTTGCAATGC+TGG + chr2_4:40225451-40225470 Msa0328060:CDS 45.0%
! AAGCCTCCTCCTGAACTTTT+TGG + chr2_4:40225659-40225678 Msa0328060:CDS 45.0%
!! AAAAGAATAATAATTATTAA+CGG - chr2_4:40223954-40223973 None:intergenic 5.0%
!! AAAAGAATAATAATTATTAA+CGG - chr2_4:40223954-40223973 None:intergenic 5.0%
! TTCCCAGAAGGGTGATGATG+GGG + chr2_4:40224190-40224209 Msa0328060:CDS 50.0%
! CCTATCCTTGTTGTCTCCGA+AGG - chr2_4:40224469-40224488 None:intergenic 50.0%
CCTTCGGAGACAACAAGGAT+AGG + chr2_4:40224466-40224485 Msa0328060:CDS 50.0%
GATAGGGCTGTCTGAGAAGT+TGG + chr2_4:40224483-40224502 Msa0328060:CDS 50.0%
TAGGGCTGTCTGAGAAGTTG+GGG + chr2_4:40224485-40224504 Msa0328060:CDS 50.0%
GTCTGAGAAGTTGGGGTTGT+CGG + chr2_4:40224492-40224511 Msa0328060:CDS 50.0%
CGGATCGACAGTTACAGATG+TGG + chr2_4:40224512-40224531 Msa0328060:CDS 50.0%
!!! AGATGTGGTTTTGTCACCGG+AGG + chr2_4:40224527-40224546 Msa0328060:CDS 50.0%
CCGGAGGTTGAAAGACAAGA+AGG + chr2_4:40224543-40224562 Msa0328060:CDS 50.0%
AAGGCTCCAGAATCCAGCAA+AGG - chr2_4:40224601-40224620 None:intergenic 50.0%
AAAAACTCCGTCCGGGCAAA+CGG - chr2_4:40224662-40224681 None:intergenic 50.0%
! GGCCAGTGTTTTATCTCCCA+AGG + chr2_4:40224709-40224728 Msa0328060:intron 50.0%
CACAGCCATTAGTGACCAAC+TGG + chr2_4:40225069-40225088 Msa0328060:intron 50.0%
GACTCCCAGTTGGTCACTAA+TGG - chr2_4:40225077-40225096 None:intergenic 50.0%
GCAAATCAAGGACTCCCAGT+TGG - chr2_4:40225087-40225106 None:intergenic 50.0%
TCCGCTAAACAACTGTGTGC+CGG + chr2_4:40225325-40225344 Msa0328060:CDS 50.0%
ACCGGCACACAGTTGTTTAG+CGG - chr2_4:40225329-40225348 None:intergenic 50.0%
!! AGAACCGGGATTTCTGGCAT+AGG + chr2_4:40225611-40225630 Msa0328060:CDS 50.0%
CAGGAGGAGGCTTGTATGTT+TGG - chr2_4:40225652-40225671 None:intergenic 50.0%
GGTCCAAAAAGTTCAGGAGG+AGG - chr2_4:40225665-40225684 None:intergenic 50.0%
! TTCCCAGAAGGGTGATGATG+GGG + chr2_4:40224190-40224209 Msa0328060:CDS 50.0%
! CCTATCCTTGTTGTCTCCGA+AGG - chr2_4:40224469-40224488 None:intergenic 50.0%
CCTTCGGAGACAACAAGGAT+AGG + chr2_4:40224466-40224485 Msa0328060:CDS 50.0%
GATAGGGCTGTCTGAGAAGT+TGG + chr2_4:40224483-40224502 Msa0328060:CDS 50.0%
TAGGGCTGTCTGAGAAGTTG+GGG + chr2_4:40224485-40224504 Msa0328060:CDS 50.0%
GTCTGAGAAGTTGGGGTTGT+CGG + chr2_4:40224492-40224511 Msa0328060:CDS 50.0%
CGGATCGACAGTTACAGATG+TGG + chr2_4:40224512-40224531 Msa0328060:CDS 50.0%
!!! AGATGTGGTTTTGTCACCGG+AGG + chr2_4:40224527-40224546 Msa0328060:CDS 50.0%
CCGGAGGTTGAAAGACAAGA+AGG + chr2_4:40224543-40224562 Msa0328060:CDS 50.0%
AAGGCTCCAGAATCCAGCAA+AGG - chr2_4:40224601-40224620 None:intergenic 50.0%
AAAAACTCCGTCCGGGCAAA+CGG - chr2_4:40224662-40224681 None:intergenic 50.0%
! GGCCAGTGTTTTATCTCCCA+AGG + chr2_4:40224709-40224728 Msa0328060:intron 50.0%
CACAGCCATTAGTGACCAAC+TGG + chr2_4:40225069-40225088 Msa0328060:intron 50.0%
GACTCCCAGTTGGTCACTAA+TGG - chr2_4:40225077-40225096 None:intergenic 50.0%
GCAAATCAAGGACTCCCAGT+TGG - chr2_4:40225087-40225106 None:intergenic 50.0%
TCCGCTAAACAACTGTGTGC+CGG + chr2_4:40225325-40225344 Msa0328060:CDS 50.0%
ACCGGCACACAGTTGTTTAG+CGG - chr2_4:40225329-40225348 None:intergenic 50.0%
!! AGAACCGGGATTTCTGGCAT+AGG + chr2_4:40225611-40225630 Msa0328060:CDS 50.0%
CAGGAGGAGGCTTGTATGTT+TGG - chr2_4:40225652-40225671 None:intergenic 50.0%
GGTCCAAAAAGTTCAGGAGG+AGG - chr2_4:40225665-40225684 None:intergenic 50.0%
!! TCCCAGAAGGGTGATGATGG+GGG + chr2_4:40224191-40224210 Msa0328060:CDS 55.0%
ACCCCCATCATCACCCTTCT+GGG - chr2_4:40224195-40224214 None:intergenic 55.0%
! AGCGGTTAAGAAGGCGCGAA+AGG + chr2_4:40224570-40224589 Msa0328060:CDS 55.0%
GCTCCAGAATCCAGCAAAGG+TGG - chr2_4:40224598-40224617 None:intergenic 55.0%
TATGGATCCGGGTCAGGTTC+TGG + chr2_4:40224629-40224648 Msa0328060:intron 55.0%
ATGGATCCGGGTCAGGTTCT+GGG + chr2_4:40224630-40224649 Msa0328060:intron 55.0%
AAAACTCCGTCCGGGCAAAC+GGG - chr2_4:40224661-40224680 None:intergenic 55.0%
!! TCCCAGAAGGGTGATGATGG+GGG + chr2_4:40224191-40224210 Msa0328060:CDS 55.0%
ACCCCCATCATCACCCTTCT+GGG - chr2_4:40224195-40224214 None:intergenic 55.0%
! AGCGGTTAAGAAGGCGCGAA+AGG + chr2_4:40224570-40224589 Msa0328060:CDS 55.0%
GCTCCAGAATCCAGCAAAGG+TGG - chr2_4:40224598-40224617 None:intergenic 55.0%
TATGGATCCGGGTCAGGTTC+TGG + chr2_4:40224629-40224648 Msa0328060:intron 55.0%
ATGGATCCGGGTCAGGTTCT+GGG + chr2_4:40224630-40224649 Msa0328060:intron 55.0%
AAAACTCCGTCCGGGCAAAC+GGG - chr2_4:40224661-40224680 None:intergenic 55.0%
CACCCCCATCATCACCCTTC+TGG - chr2_4:40224196-40224215 None:intergenic 60.0%
GCGCCACCTTTGCTGGATTC+TGG + chr2_4:40224592-40224611 Msa0328060:CDS 60.0%
GCTAGACCCAGAACCTGACC+CGG - chr2_4:40224639-40224658 None:intergenic 60.0%
CACCCCCATCATCACCCTTC+TGG - chr2_4:40224196-40224215 None:intergenic 60.0%
GCGCCACCTTTGCTGGATTC+TGG + chr2_4:40224592-40224611 Msa0328060:CDS 60.0%
GCTAGACCCAGAACCTGACC+CGG - chr2_4:40224639-40224658 None:intergenic 60.0%
!! GCGAAAGGCGCCACCTTTGC+TGG + chr2_4:40224585-40224604 Msa0328060:CDS 65.0%
CTGGGTCTAGCCCGTTTGCC+CGG + chr2_4:40224648-40224667 Msa0328060:intron 65.0%
GTCTAGCCCGTTTGCCCGGA+CGG + chr2_4:40224652-40224671 Msa0328060:intron 65.0%
!! GCGAAAGGCGCCACCTTTGC+TGG + chr2_4:40224585-40224604 Msa0328060:CDS 65.0%
CTGGGTCTAGCCCGTTTGCC+CGG + chr2_4:40224648-40224667 Msa0328060:intron 65.0%
GTCTAGCCCGTTTGCCCGGA+CGG + chr2_4:40224652-40224671 Msa0328060:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 40223931 40225784 40223931 ID=Msa0328060;Name=Msa0328060
chr2_4 mRNA 40223931 40225784 40223931 ID=Msa0328060-mRNA-1;Parent=Msa0328060;Name=Msa0328060-mRNA-1;_AED=0.19;_eAED=0.19;_QI=236|0.5|0.33|1|1|1|3|0|295
chr2_4 exon 40223931 40224344 40223931 ID=Msa0328060-mRNA-1:exon:12243;Parent=Msa0328060-mRNA-1
chr2_4 exon 40224455 40224620 40224455 ID=Msa0328060-mRNA-1:exon:12244;Parent=Msa0328060-mRNA-1
chr2_4 exon 40225241 40225784 40225241 ID=Msa0328060-mRNA-1:exon:12245;Parent=Msa0328060-mRNA-1
chr2_4 five_prime_UTR 40223931 40224166 40223931 ID=Msa0328060-mRNA-1:five_prime_utr;Parent=Msa0328060-mRNA-1
chr2_4 CDS 40224167 40224344 40224167 ID=Msa0328060-mRNA-1:cds;Parent=Msa0328060-mRNA-1
chr2_4 CDS 40224455 40224620 40224455 ID=Msa0328060-mRNA-1:cds;Parent=Msa0328060-mRNA-1
chr2_4 CDS 40225241 40225784 40225241 ID=Msa0328060-mRNA-1:cds;Parent=Msa0328060-mRNA-1
Gene Sequence

>Msa0328060

ATGGAAGCTGAAGCAGAGAATAATTCCCAGAAGGGTGATGATGGGGGTGAAAATAGTAATGAAAATTTCAACAATGGAAGTAACAACAAGATTATGAGTTCAGGTGAAGGTCAAAGCAAACCTAAGAGACAAATGAAAACCCCTTTTCAGCTTGAAATGCTTGAGAAAGCTTATGCTTTGGAGACATATCCTTCGGAGACAACAAGGATAGGGCTGTCTGAGAAGTTGGGGTTGTCGGATCGACAGTTACAGATGTGGTTTTGTCACCGGAGGTTGAAAGACAAGAAGGAGTTAGCGGTTAAGAAGGCGCGAAAGGCGCCACCTTTGCTGGATTCTGGAGCCTTACTTGTGAATAATCCAGTTTGCCAAGAAAGTGGAGTTAAACGAACTTACTGCTCGATTGAAAAAACCAACGACACATATACAACTCCGCTAAACAACTGTGTGCCGGTTGAATGCATTAAAAATCTGATATTAAGCCCGAAATGCAAATGTGCATACCCTTATACAGGAACGTTCACTCTTAGAGCTCCTTCTTTCTCAGACTTGGGAAACAAGACAGTGTTTGCAATGCTGGAATTTACTCTGATGGAGTCTTTTAGACTTCATGAGAAACCTGTGGATTCAGTTTCTTTAAGCAATCCAAGGAAGAATGCATATCAGTATCTTGATTTGAGTTTAGAAATATTTCCATCAGGTCAAGATTCTTTCAATAGAACCGGGATTTCTGGCATAGGATTTATGCTTAGCAACCAAACATACAAGCCTCCTCCTGAACTTTTTGGACCATTTTATTTCATTGGTGATATGTATGATCACTATTTGAAAGATTCGGTTATGTGTATGGGGTTCTCCATGTCGATAGAATTGAATGGCAGAATTAATTAA
Protein sequence

>Msa0328060

MEAEAENNSQKGDDGGENSNENFNNGSNNKIMSSGEGQSKPKRQMKTPFQLEMLEKAYALETYPSETTRIGLSEKLGLSDRQLQMWFCHRRLKDKKELAVKKARKAPPLLDSGALLVNNPVCQESGVKRTYCSIEKTNDTYTTPLNNCVPVECIKNLILSPKCKCAYPYTGTFTLRAPSFSDLGNKTVFAMLEFTLMESFRLHEKPVDSVSLSNPRKNAYQYLDLSLEIFPSGQDSFNRTGISGIGFMLSNQTYKPPPELFGPFYFIGDMYDHYLKDSVMCMGFSMSIELNGRIN*