AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0329980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329980 MtrunA17_Chr2g0312161 81.570 586 31 6 1 510 1 585 0.0 905
Msa0329980 MtrunA17_Chr2g0319221 58.730 63 22 1 1 63 1 59 4.23e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329980 AT1G04390.1 36.735 539 266 7 23 488 10 546 2.07e-97 317

Find 177 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTGTTATTAACTTAAT+TGG 0.088135 2_4:-43942833 Msa0329980:CDS
GGAATCTGCTGCTGATATTT+TGG 0.141395 2_4:-43944530 Msa0329980:CDS
CTCCTTCATATAGGCAATTA+AGG 0.156017 2_4:-43940475 Msa0329980:three_prime_UTR
GCTTGGTGAGTTCTGGATTT+TGG 0.177722 2_4:-43940631 Msa0329980:three_prime_UTR
TGCAAACTGTATTCCATAAA+AGG 0.232443 2_4:-43942674 Msa0329980:CDS
AGACCTGGTGCCAAGGTTTA+AGG 0.234948 2_4:+43945886 None:intergenic
CTCTCTCATCCCACAAATTA+TGG 0.241887 2_4:+43943656 None:intergenic
CTAAAGCTGTACACATCTTT+AGG 0.249325 2_4:-43944049 Msa0329980:intron
CTATTTAGTTTGAAAGTTAT+AGG 0.251064 2_4:-43940243 Msa0329980:three_prime_UTR
ATTGTTGGAATATGTATATT+TGG 0.255950 2_4:-43942146 Msa0329980:three_prime_UTR
TTGTGCTACTGCTTTGAATT+TGG 0.257052 2_4:-43944332 Msa0329980:CDS
TTTGTTGGCTTGGTGAGTTC+TGG 0.258921 2_4:-43940638 Msa0329980:three_prime_UTR
GCAAAGGAATGTCTAGTAAA+AGG 0.277394 2_4:+43942556 None:intergenic
AAGAGAGTTCCCAATCCTTT+TGG 0.277839 2_4:+43942384 None:intergenic
CTCCAATGGCAAAACAATTT+CGG 0.283584 2_4:+43943461 None:intergenic
GTCTGGATGTGATTATTTAC+AGG 0.297365 2_4:-43941437 Msa0329980:three_prime_UTR
ATAGTTGTTCTCAATCCTTT+TGG 0.298736 2_4:+43943620 None:intergenic
TCAGGGATAATATATAATCT+AGG 0.310303 2_4:+43942882 None:intergenic
TCCATAAAAGGTCTTGTTGC+TGG 0.312735 2_4:-43942662 Msa0329980:CDS
TTGTTGGAATATGTATATTT+GGG 0.319518 2_4:-43942145 Msa0329980:three_prime_UTR
CAGTCATTCACAAGTTATAA+AGG 0.319849 2_4:-43940799 Msa0329980:three_prime_UTR
CTTCCACAAAGAGAGCTTAT+AGG 0.323613 2_4:+43940526 None:intergenic
GGTAACTGTTACAGTTAGTT+AGG 0.324663 2_4:-43940149 Msa0329980:three_prime_UTR
TTTCTGCAGCTTCACATTTG+TGG 0.335071 2_4:-43943092 Msa0329980:intron
GGCTATGTTACAGTTATATT+AGG 0.340587 2_4:-43940170 Msa0329980:three_prime_UTR
TAGCCTAACAGCTCAAAATA+AGG 0.350134 2_4:+43940188 None:intergenic
GATTGGGAACTCTCTTAATA+AGG 0.355453 2_4:-43942377 Msa0329980:three_prime_UTR
AAAAGGATTGAGAACAACTA+TGG 0.357983 2_4:-43943618 Msa0329980:CDS
TGTTGAGGTGGCCTTCATCT+AGG 0.358318 2_4:-43944156 Msa0329980:CDS
GCAAAACAATTTCGGAAGAT+TGG 0.358748 2_4:+43943469 None:intergenic
AACTTGTTATTAACTTAATT+GGG 0.359198 2_4:-43942832 Msa0329980:CDS
ATTAAAACAGCCCTTGATAC+TGG 0.361067 2_4:+43943007 None:intergenic
TGAAGCATTGATGTTATTGT+TGG 0.363458 2_4:-43942161 Msa0329980:three_prime_UTR
ATGTTCGGATAGAGGGGTTT+CGG 0.364447 2_4:-43943836 Msa0329980:CDS
CAATAGAAGCGGAATAAATA+AGG 0.367946 2_4:+43940412 None:intergenic
TTGCGACTCATTGTAGCAAA+TGG 0.377835 2_4:-43942340 Msa0329980:three_prime_UTR
TCGGCTTGCTCAATGTCTAT+TGG 0.377904 2_4:-43943817 Msa0329980:intron
AAAGTATTCAGGAAGCTTGC+TGG 0.379435 2_4:-43940608 Msa0329980:three_prime_UTR
TCCTTCATATAGGCAATTAA+GGG 0.380231 2_4:-43940474 Msa0329980:three_prime_UTR
GAGTTATTAATGTTTAGTTC+TGG 0.382914 2_4:-43940127 Msa0329980:three_prime_UTR
AGTTATGTGTGGGACGTTCT+TGG 0.385008 2_4:-43943381 Msa0329980:CDS
TCAAATTGGTTGATGATTGA+TGG 0.387916 2_4:-43946096 Msa0329980:five_prime_UTR
TTGATGAAAAGACGAATAGA+TGG 0.389206 2_4:-43945735 Msa0329980:CDS
AACAAACACGGTTGCAATAG+TGG 0.393093 2_4:+43944415 None:intergenic
AGAAAATTGTTTAAAAGTGA+TGG 0.395093 2_4:-43943706 Msa0329980:CDS
AAAAGGTCTTGTTGCTGGAT+TGG 0.407271 2_4:-43942657 Msa0329980:CDS
TATGTGGAGCTTTGTTGGCT+TGG 0.408026 2_4:-43940648 Msa0329980:three_prime_UTR
GCTAAATTGAATGGGCTTGT+TGG 0.410643 2_4:-43941523 Msa0329980:three_prime_UTR
AGTTCAACATCATTACAAAC+AGG 0.413790 2_4:+43944130 None:intergenic
ACTATTGCAACCGTGTTTGT+TGG 0.414256 2_4:-43944413 Msa0329980:CDS
TTATAAAGGTTGATATTAGC+TGG 0.423730 2_4:-43940785 Msa0329980:three_prime_UTR
CTTCTCCATTCCTTAAACCT+TGG 0.423873 2_4:-43945896 Msa0329980:CDS
CAACTATGGTTCTGTATTAG+TGG 0.423956 2_4:-43943604 Msa0329980:CDS
TGCGACTCATTGTAGCAAAT+GGG 0.425092 2_4:-43942339 Msa0329980:three_prime_UTR
AGCCATATGTGGAGCTTTGT+TGG 0.425519 2_4:-43940653 Msa0329980:three_prime_UTR
CCCTCATGATGTTCGGATAG+AGG 0.430203 2_4:-43943844 Msa0329980:CDS
TTACAGGGTTTGTTCAGATC+AGG 0.430822 2_4:-43941421 Msa0329980:three_prime_UTR
GGGGATTCCGTGAGTGTTCA+TGG 0.433973 2_4:-43942319 Msa0329980:three_prime_UTR
TTGTTGATGCCATAATTTGT+GGG 0.444369 2_4:-43943665 Msa0329980:CDS
GTTATGTGTGGGACGTTCTT+GGG 0.450565 2_4:-43943380 Msa0329980:intron
TATATTTCGAACAATGCAAA+TGG 0.452695 2_4:+43944243 None:intergenic
GTCTGATTCTTCTAAGCAGT+TGG 0.457633 2_4:-43940569 Msa0329980:three_prime_UTR
TAAGCTCTCTTTGTGGAAGT+TGG 0.457752 2_4:-43940522 Msa0329980:three_prime_UTR
TTCAAGGTGAACCAGTATCA+AGG 0.459159 2_4:-43943018 Msa0329980:CDS
ACTTCATCTCTTGATTCAGC+TGG 0.463446 2_4:-43941986 Msa0329980:three_prime_UTR
CTTTCAGTCCTGGAGTGAAA+TGG 0.463586 2_4:-43942461 Msa0329980:three_prime_UTR
CCTCATGATGTTCGGATAGA+GGG 0.466662 2_4:-43943843 Msa0329980:CDS
CACAAAGTTATATTGCAGTC+TGG 0.467245 2_4:-43941454 Msa0329980:three_prime_UTR
ATAATGGAAGCTAAATTGAA+TGG 0.468646 2_4:-43941532 Msa0329980:three_prime_UTR
CTGCAAAGCATTTGCAAGAG+AGG 0.471231 2_4:+43942052 None:intergenic
AATGGAGAAGACGGCGATGA+AGG 0.471770 2_4:+43945909 None:intergenic
ATGGATATTTGTTTCTCCAA+TGG 0.474322 2_4:+43943447 None:intergenic
ATGCCTATAAGCTCTCTTTG+TGG 0.478466 2_4:-43940529 Msa0329980:three_prime_UTR
AGCCAACAAAGCTCCACATA+TGG 0.482790 2_4:+43940651 None:intergenic
AATCTAACCCTCATGATGTT+CGG 0.483450 2_4:-43943851 Msa0329980:CDS
GGAAAAGGTGTGCCCCACTT+TGG 0.488293 2_4:+43942022 None:intergenic
AGTAGCACCTCTTTCAGTCC+TGG 0.489560 2_4:-43942471 Msa0329980:three_prime_UTR
TAATGGAAGCTAAATTGAAT+GGG 0.489988 2_4:-43941531 Msa0329980:three_prime_UTR
GTAAGATTCAAGCTGGGAAA+AGG 0.492297 2_4:+43942007 None:intergenic
ATTTGTGGGATGAGAGAGAC+AGG 0.492475 2_4:-43943651 Msa0329980:CDS
TGGTTGTTTGTGGGTTAACA+TGG 0.493074 2_4:-43940703 Msa0329980:three_prime_UTR
AATTGAATGGGCTTGTTGGA+TGG 0.493303 2_4:-43941519 Msa0329980:three_prime_UTR
TGAACATGCATATGTGGTAC+TGG 0.495754 2_4:+43941475 None:intergenic
ATTCAATTTGCAGCCATATG+TGG 0.496585 2_4:-43940664 Msa0329980:three_prime_UTR
CAGGGATAATATATAATCTA+GGG 0.497938 2_4:+43942883 None:intergenic
AGATGAAGTAAGATTCAAGC+TGG 0.497997 2_4:+43942000 None:intergenic
TATAAAGGTTGATATTAGCT+GGG 0.501910 2_4:-43940784 Msa0329980:three_prime_UTR
ATTCCTTAAACCTTGGCACC+AGG 0.502270 2_4:-43945889 Msa0329980:intron
GTCTCATAGCTCCTTCATAT+AGG 0.503354 2_4:-43940484 Msa0329980:three_prime_UTR
ACAAATGATTGTGCAGGCGA+TGG 0.504540 2_4:-43943877 Msa0329980:CDS
GTAGGCTGCAAGAAAAGCTT+GGG 0.508267 2_4:-43940091 Msa0329980:three_prime_UTR
CATTGATTAAACTAGTACAT+TGG 0.512817 2_4:-43940758 Msa0329980:three_prime_UTR
GAAACAAATATCCATGGTAA+AGG 0.514701 2_4:-43943439 Msa0329980:CDS
GCTGGATTGGTAAAGGAGAC+TGG 0.514721 2_4:-43942644 Msa0329980:CDS
CTTGTTGATGCCATAATTTG+TGG 0.517271 2_4:-43943666 Msa0329980:CDS
ATTTCTACAAATGATTGTGC+AGG 0.517797 2_4:-43943883 Msa0329980:CDS
TCTTGTTGCTGGATTGGTAA+AGG 0.518147 2_4:-43942651 Msa0329980:CDS
ATTTGATGCCATGCTTAACA+AGG 0.520764 2_4:+43944471 None:intergenic
CCCTCTATCCGAACATCATG+AGG 0.521428 2_4:+43943843 None:intergenic
TCCTTTGCAATTTAGTAGAG+AGG 0.521866 2_4:-43942541 Msa0329980:three_prime_UTR
TCTATTGAACTTAACCATGA+AGG 0.522377 2_4:-43940396 Msa0329980:three_prime_UTR
GAGAGAGAGACCTGGTGCCA+AGG 0.523511 2_4:+43945879 None:intergenic
TTGCAAATGAGAGCAACCTC+TGG 0.523858 2_4:+43942692 None:intergenic
AGTAGGCTGCAAGAAAAGCT+TGG 0.524766 2_4:-43940092 Msa0329980:three_prime_UTR
ATTGAATGGGCTTGTTGGAT+GGG 0.524976 2_4:-43941518 Msa0329980:three_prime_UTR
CAAATGATTGTGCAGGCGAT+GGG 0.525532 2_4:-43943876 Msa0329980:CDS
ATGGAGAAGACGGCGATGAA+GGG 0.526641 2_4:+43945910 None:intergenic
GTAATGATATTCATGTAGAA+AGG 0.527922 2_4:-43942715 Msa0329980:CDS
TGTAGCACAAAAGCTTATAG+AGG 0.528432 2_4:-43943916 Msa0329980:CDS
TCCCTTAATTGCCTATATGA+AGG 0.529685 2_4:+43940473 None:intergenic
ACAAATATCCATGGTAAAGG+AGG 0.530448 2_4:-43943436 Msa0329980:CDS
GCACAAAAGCTTATAGAGGA+TGG 0.531800 2_4:-43943912 Msa0329980:CDS
CAATTAAGTTAATAACAAGT+TGG 0.532753 2_4:+43942834 None:intergenic
CACGGTTGCAATAGTGGACT+CGG 0.534163 2_4:+43944421 None:intergenic
AGACAGGGCCGTGTTCCAAA+AGG 0.534873 2_4:-43943635 Msa0329980:CDS
TGAGCACAATTCTGTTGAGG+TGG 0.536544 2_4:-43944168 Msa0329980:CDS
ACTTCTGAAGGTAGAAGTGC+TGG 0.546217 2_4:+43942274 None:intergenic
CTGGATTGGTAAAGGAGACT+GGG 0.546314 2_4:-43942643 Msa0329980:CDS
TACAGATATGATTCATTCGA+CGG 0.548282 2_4:-43945999 Msa0329980:exon
TTGGAATATGTATATTTGGG+AGG 0.551105 2_4:-43942142 Msa0329980:three_prime_UTR
TTGCAGACAATCTCCAAAGT+GGG 0.558280 2_4:-43942035 Msa0329980:three_prime_UTR
TTTCACTCCAGGACTGAAAG+AGG 0.560173 2_4:+43942464 None:intergenic
GATTCATTCGACGGTGAAAG+CGG 0.560780 2_4:-43945990 Msa0329980:CDS
TGGTGCCAAGGTTTAAGGAA+TGG 0.562873 2_4:+43945891 None:intergenic
AAAACATACCATTTCACTCC+AGG 0.565154 2_4:+43942453 None:intergenic
ATGGTTAAGTTCAATAGAAG+CGG 0.567320 2_4:+43940401 None:intergenic
TTTCAGTCCCTCCTTTACCA+TGG 0.569781 2_4:+43943428 None:intergenic
AAAAGACGAATAGATGGAAG+TGG 0.570464 2_4:-43945729 Msa0329980:CDS
TCTGGATGTGATTATTTACA+GGG 0.570759 2_4:-43941436 Msa0329980:three_prime_UTR
TCAAGGTGAACCAGTATCAA+GGG 0.573541 2_4:-43943017 Msa0329980:CDS
ACCATAAAATAAGACAACAT+TGG 0.575853 2_4:+43942614 None:intergenic
ATTGGAGAAACAAATATCCA+TGG 0.576382 2_4:-43943445 Msa0329980:CDS
AAATGAGCCCTTGTTAAGCA+TGG 0.585174 2_4:-43944479 Msa0329980:CDS
ATGATACATCTTTGATACTG+TGG 0.585455 2_4:+43942788 None:intergenic
GCGACTCATTGTAGCAAATG+GGG 0.586804 2_4:-43942338 Msa0329980:three_prime_UTR
TGTATTATCTGATATACTGA+AGG 0.587784 2_4:-43942942 Msa0329980:CDS
ACCTCTCTACTAAATTGCAA+AGG 0.591394 2_4:+43942540 None:intergenic
CAAACAGGGAACCTAGATGA+AGG 0.594928 2_4:+43944145 None:intergenic
TACTTGATGTGAGGACAGCA+AGG 0.595534 2_4:+43944369 None:intergenic
AACCCACAAACAACCAGAAG+GGG 0.597408 2_4:+43940710 None:intergenic
GATTAGCAACTCTCTCTCGA+CGG 0.599356 2_4:-43946037 Msa0329980:five_prime_UTR
ACTTTGTGAACATGCATATG+TGG 0.600186 2_4:+43941469 None:intergenic
GTTAAGCATGGCATCAAATG+TGG 0.600853 2_4:-43944467 Msa0329980:CDS
GCATGTGAGGAAATATTACA+TGG 0.602497 2_4:+43942971 None:intergenic
TTGCTCTGAGGAGTTATGTG+TGG 0.604086 2_4:-43943392 Msa0329980:CDS
TCTGGCAAAGTCCTGTCAGT+AGG 0.605371 2_4:-43940109 Msa0329980:three_prime_UTR
TAATACAGATCTAGCATGTG+AGG 0.610195 2_4:+43942958 None:intergenic
TGCAACTTCTACTTGATGTG+AGG 0.612048 2_4:+43944360 None:intergenic
TGCTCTGAGGAGTTATGTGT+GGG 0.613589 2_4:-43943391 Msa0329980:CDS
GGTTTAAGGAATGGAGAAGA+CGG 0.616386 2_4:+43945900 None:intergenic
CTCATGATGTTCGGATAGAG+GGG 0.616659 2_4:-43943842 Msa0329980:CDS
GATGTATCATAGAAAGCAGA+GGG 0.617898 2_4:-43942775 Msa0329980:CDS
TAACCCACAAACAACCAGAA+GGG 0.618235 2_4:+43940709 None:intergenic
AATAACACCATGAACACTCA+CGG 0.621202 2_4:+43942312 None:intergenic
CAAATATCCATGGTAAAGGA+GGG 0.623502 2_4:-43943435 Msa0329980:CDS
TCTGATATACTGAAGGTCGT+AGG 0.625652 2_4:-43942935 Msa0329980:CDS
TTTGCAGACAATCTCCAAAG+TGG 0.628783 2_4:-43942036 Msa0329980:three_prime_UTR
TCAGATCAGGAATGCAAGAG+AGG 0.630141 2_4:-43941408 Msa0329980:intron
TTAACCCACAAACAACCAGA+AGG 0.634727 2_4:+43940708 None:intergenic
TTTCAATTAGAAGATTAAGG+AGG 0.635301 2_4:+43943502 None:intergenic
GATGAAGTAAGATTCAAGCT+GGG 0.635396 2_4:+43942001 None:intergenic
CTACTAGATAGCACTTCTGA+AGG 0.647267 2_4:+43942262 None:intergenic
TTTGATGCCATGCTTAACAA+GGG 0.651494 2_4:+43944472 None:intergenic
AGATGTATCATAGAAAGCAG+AGG 0.653768 2_4:-43942776 Msa0329980:CDS
ATTGGTAAAGGAGACTGGGA+AGG 0.660276 2_4:-43942639 Msa0329980:CDS
CCTCTATCCGAACATCATGA+GGG 0.663643 2_4:+43943844 None:intergenic
AAATTCAAAGCAGTAGCACA+AGG 0.669590 2_4:+43944334 None:intergenic
TGCAGACAATCTCCAAAGTG+GGG 0.673141 2_4:-43942034 Msa0329980:three_prime_UTR
TCAATTATCATGTTGCTCTG+AGG 0.675945 2_4:-43943404 Msa0329980:CDS
ACCCACAAACAACCAGAAGG+GGG 0.681171 2_4:+43940711 None:intergenic
GTTCAACATCATTACAAACA+GGG 0.689432 2_4:+43944131 None:intergenic
TTAAAAGTGATGGATTTGTG+TGG 0.698912 2_4:-43943696 Msa0329980:CDS
TAGACAAGATCCAACAAACA+CGG 0.705372 2_4:+43944403 None:intergenic
TATTCATGTAGAAAGGCCAG+AGG 0.722961 2_4:-43942708 Msa0329980:CDS
TTTGTGGGATGAGAGAGACA+GGG 0.753747 2_4:-43943650 Msa0329980:CDS
GTTCGAAATATAAAAGACCG+CGG 0.753888 2_4:-43944232 Msa0329980:CDS
ATTCAATCTTCTGTGCACCG+CGG 0.760395 2_4:+43944215 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGAGATTTTTATTATAAATA+AGG + chr2_4:43941327-43941346 None:intergenic 10.0%
!!! ATTATATTTCTAAAATTTCA+TGG - chr2_4:43943053-43943072 Msa0329980:CDS 10.0%
!!! TTTTATATTCTAAGTTATTT+TGG - chr2_4:43943786-43943805 Msa0329980:intron 10.0%
!! GATAAAAAAAACAATCAAAT+TGG - chr2_4:43940109-43940128 Msa0329980:three_prime_UTR 15.0%
!!! TATTATAATGAAGGATATTT+TGG + chr2_4:43941384-43941403 None:intergenic 15.0%
!! TGTGATAATTATTATAATGA+AGG + chr2_4:43941393-43941412 None:intergenic 15.0%
!!! ATTATCACATTAATTTGTAT+TGG - chr2_4:43941404-43941423 Msa0329980:intron 15.0%
!!! TTATCACATTAATTTGTATT+GGG - chr2_4:43941405-43941424 Msa0329980:intron 15.0%
!!! TTGTTTTATATGATAAACAT+TGG - chr2_4:43942434-43942453 Msa0329980:three_prime_UTR 15.0%
!!! TATTTTCAATTAGAAGATTA+AGG + chr2_4:43942723-43942742 None:intergenic 15.0%
!! AAGTCATACAAAAATAATAA+TGG + chr2_4:43942972-43942991 None:intergenic 15.0%
!!! AATTTTAGAAATATAATCAG+TGG + chr2_4:43943050-43943069 None:intergenic 15.0%
!!! AACTTGTTATTAACTTAATT+GGG - chr2_4:43943387-43943406 Msa0329980:CDS 15.0%
!! AATAAATATGGAAATAAACA+TGG + chr2_4:43944351-43944370 None:intergenic 15.0%
!! AAAAAGAAAAAGATAACGAT+CGG - chr2_4:43940264-43940283 Msa0329980:three_prime_UTR 20.0%
!!! TAATGAGTTGGATATAAATA+TGG - chr2_4:43941056-43941075 Msa0329980:intron 20.0%
!! AATTATTTGACACACAAAAA+AGG + chr2_4:43941217-43941236 None:intergenic 20.0%
!!! TTTTTTGTGTGTCAAATAAT+TGG - chr2_4:43941216-43941235 Msa0329980:intron 20.0%
!! AATATTTCGTATCTATAACA+TGG - chr2_4:43941276-43941295 Msa0329980:intron 20.0%
!! TTTATTATAAATAAGGTCGA+AGG + chr2_4:43941320-43941339 None:intergenic 20.0%
!! TTGAAAATAGAAAATCAGTA+AGG - chr2_4:43941443-43941462 Msa0329980:three_prime_UTR 20.0%
!! TGAAAATAGAAAATCAGTAA+GGG - chr2_4:43941444-43941463 Msa0329980:three_prime_UTR 20.0%
!! ATATCAAATAAAGCTGAATT+TGG - chr2_4:43941483-43941502 Msa0329980:three_prime_UTR 20.0%
!!! ATGACTTTTGCTTATAAATA+AGG - chr2_4:43941541-43941560 Msa0329980:three_prime_UTR 20.0%
!!! ATTTGTTTTAAGAGAGATAA+GGG - chr2_4:43941586-43941605 Msa0329980:intron 20.0%
!!! AATGTTTTTTGTTTTGTTGA+GGG + chr2_4:43942222-43942241 None:intergenic 20.0%
!!! AAATGTTTTTTGTTTTGTTG+AGG + chr2_4:43942223-43942242 None:intergenic 20.0%
!!! CACTTTTAAACAATTTTCTT+GGG + chr2_4:43942512-43942531 None:intergenic 20.0%
!!! TCACTTTTAAACAATTTTCT+TGG + chr2_4:43942513-43942532 None:intergenic 20.0%
!! AGAAAATTGTTTAAAAGTGA+TGG - chr2_4:43942513-43942532 Msa0329980:three_prime_UTR 20.0%
!!! ATATGAACAATAACTTTTCA+GGG + chr2_4:43943357-43943376 None:intergenic 20.0%
!! CAATTAAGTTAATAACAAGT+TGG + chr2_4:43943388-43943407 None:intergenic 20.0%
!!! CAACTTGTTATTAACTTAAT+TGG - chr2_4:43943386-43943405 Msa0329980:CDS 20.0%
!!! CTAAGTTATTTTGGATTTTA+TGG - chr2_4:43943795-43943814 Msa0329980:intron 20.0%
!! ATTGTTGGAATATGTATATT+TGG - chr2_4:43944073-43944092 Msa0329980:CDS 20.0%
!! TTGTTGGAATATGTATATTT+GGG - chr2_4:43944074-43944093 Msa0329980:CDS 20.0%
!! TATATGGAAGGAAATAAATA+TGG + chr2_4:43944363-43944382 None:intergenic 20.0%
!! TCTGTAAAATATCAATTTCA+AGG + chr2_4:43944398-43944417 None:intergenic 20.0%
!!! CAACTCTTATTTGAAAAATA+CGG + chr2_4:43944427-43944446 None:intergenic 20.0%
!! TAACATTGTTTAAGTAGTTT+AGG - chr2_4:43944621-43944640 Msa0329980:intron 20.0%
!!! AGAATTTAATTTGAACATCT+AGG + chr2_4:43944915-43944934 None:intergenic 20.0%
!! CAAACAATACTTTATCAAAT+AGG + chr2_4:43945089-43945108 None:intergenic 20.0%
!!! CTATTTGATAAAGTATTGTT+TGG - chr2_4:43945087-43945106 Msa0329980:intron 20.0%
!! TTCAAACTTAATCTAAGAAT+TGG - chr2_4:43945143-43945162 Msa0329980:intron 20.0%
!! ACATTAACATTTCATAAAGA+TGG + chr2_4:43945192-43945211 None:intergenic 20.0%
!! CATAAAAAATCAAAAGCAAA+GGG + chr2_4:43945231-43945250 None:intergenic 20.0%
!! TCATAAAAAATCAAAAGCAA+AGG + chr2_4:43945232-43945251 None:intergenic 20.0%
!!! TCTGTTAACTTTAAATTTTG+TGG - chr2_4:43945348-43945367 Msa0329980:intron 20.0%
!!! CTATTTAGTTTGAAAGTTAT+AGG - chr2_4:43945976-43945995 Msa0329980:CDS 20.0%
! AAAAAAGCGAAGAATGAATT+CGG + chr2_4:43940411-43940430 None:intergenic 25.0%
! AGAAAAAAATACCTTAACGA+TGG + chr2_4:43940610-43940629 None:intergenic 25.0%
! AGTTAAAGATAGAATTGTTG+AGG - chr2_4:43940720-43940739 Msa0329980:three_prime_UTR 25.0%
! GTATCTAGATATTAATGAGT+TGG - chr2_4:43941044-43941063 Msa0329980:intron 25.0%
!! AAAGATTGGTTATTGCTAAA+CGG - chr2_4:43941248-43941267 Msa0329980:intron 25.0%
! GAAAATAGAAAATCAGTAAG+GGG - chr2_4:43941445-43941464 Msa0329980:three_prime_UTR 25.0%
!!! CATTTGTTTTAAGAGAGATA+AGG - chr2_4:43941585-43941604 Msa0329980:intron 25.0%
!!! TTTGTTTTAAGAGAGATAAG+GGG - chr2_4:43941587-43941606 Msa0329980:intron 25.0%
! TATATTTCGAACAATGCAAA+TGG + chr2_4:43941979-43941998 None:intergenic 25.0%
!! ACAGAAGATTGAATATTTTG+TGG - chr2_4:43942013-43942032 Msa0329980:three_prime_UTR 25.0%
!!! ATGTTTTTTGTTTTGTTGAG+GGG + chr2_4:43942221-43942240 None:intergenic 25.0%
! GACAAAAGTAAATGTTTGTT+AGG + chr2_4:43942478-43942497 None:intergenic 25.0%
! TTTCAATTAGAAGATTAAGG+AGG + chr2_4:43942720-43942739 None:intergenic 25.0%
! TTAGAAATATAATCAGTGGT+AGG + chr2_4:43943046-43943065 None:intergenic 25.0%
! ATAAATTTGCACAACATCAA+TGG + chr2_4:43943103-43943122 None:intergenic 25.0%
! TGTATTATCTGATATACTGA+AGG - chr2_4:43943277-43943296 Msa0329980:intron 25.0%
! CAGGGATAATATATAATCTA+GGG + chr2_4:43943339-43943358 None:intergenic 25.0%
! TCAGGGATAATATATAATCT+AGG + chr2_4:43943340-43943359 None:intergenic 25.0%
!! CATATGAACAATAACTTTTC+AGG + chr2_4:43943358-43943377 None:intergenic 25.0%
! GTAATGATATTCATGTAGAA+AGG - chr2_4:43943504-43943523 Msa0329980:CDS 25.0%
!!! TCCAATGTTGTCTTATTTTA+TGG - chr2_4:43943604-43943623 Msa0329980:CDS 25.0%
! ACCATAAAATAAGACAACAT+TGG + chr2_4:43943608-43943627 None:intergenic 25.0%
!!! TTGTCTTATTTTATGGTATG+TGG - chr2_4:43943611-43943630 Msa0329980:CDS 25.0%
!!! TGTCTTATTTTATGGTATGT+GGG - chr2_4:43943612-43943631 Msa0329980:CDS 25.0%
!!! TCCTTTTGGAAAATTCATTT+GGG + chr2_4:43943824-43943843 None:intergenic 25.0%
!!! ATCCTTTTGGAAAATTCATT+TGG + chr2_4:43943825-43943844 None:intergenic 25.0%
!! AATGAATTTTCCAAAAGGAT+TGG - chr2_4:43943825-43943844 Msa0329980:CDS 25.0%
!! ATGAATTTTCCAAAAGGATT+GGG - chr2_4:43943826-43943845 Msa0329980:CDS 25.0%
!!! GATATAACAGATTGTTTTGT+TGG - chr2_4:43943993-43944012 Msa0329980:intron 25.0%
! TATAGATATCTAGAAGAATC+TGG + chr2_4:43944289-43944308 None:intergenic 25.0%
! AGATTCTTCTAGATATCTAT+AGG - chr2_4:43944288-43944307 Msa0329980:intron 25.0%
! CTATAAACTGGATAATAGAA+TGG + chr2_4:43944506-43944525 None:intergenic 25.0%
! AAAATGACAAGTCAATAAAC+TGG + chr2_4:43944550-43944569 None:intergenic 25.0%
!!! AGTTTATTGACTTGTCATTT+TGG - chr2_4:43944549-43944568 Msa0329980:intron 25.0%
!!! GTTTATTGACTTGTCATTTT+GGG - chr2_4:43944550-43944569 Msa0329980:intron 25.0%
!! ATAATGGAAGCTAAATTGAA+TGG - chr2_4:43944687-43944706 Msa0329980:intron 25.0%
! TAATGGAAGCTAAATTGAAT+GGG - chr2_4:43944688-43944707 Msa0329980:intron 25.0%
! CTCATGAAAATTTAAGAACA+TGG - chr2_4:43944957-43944976 Msa0329980:intron 25.0%
! TTTATATCTTATCTTGACCA+GGG - chr2_4:43945004-43945023 Msa0329980:intron 25.0%
!!! TTGATTTTTTATGAGAAGCA+AGG - chr2_4:43945238-43945257 Msa0329980:intron 25.0%
!! ATTTTCAACCAAATTCGTTT+GGG - chr2_4:43945261-43945280 Msa0329980:intron 25.0%
! ATCCTTAAAAATTAGAAGCA+AGG - chr2_4:43945286-43945305 Msa0329980:intron 25.0%
!! ATCCTTGCTTCTAATTTTTA+AGG + chr2_4:43945291-43945310 None:intergenic 25.0%
! GGACAATTTCTCATAAAAAA+TGG + chr2_4:43945317-43945336 None:intergenic 25.0%
! GACTGCAATAATAAATAACA+AGG + chr2_4:43945405-43945424 None:intergenic 25.0%
!!! TTATAAAGGTTGATATTAGC+TGG - chr2_4:43945434-43945453 Msa0329980:intron 25.0%
!!! TATAAAGGTTGATATTAGCT+GGG - chr2_4:43945435-43945454 Msa0329980:intron 25.0%
!! CATTGATTAAACTAGTACAT+TGG - chr2_4:43945461-43945480 Msa0329980:intron 25.0%
!! ATACTCTTCAAGATGTTTTA+CGG - chr2_4:43945869-43945888 Msa0329980:intron 25.0%
! TTCGAAAAACTTCATATTCT+AGG + chr2_4:43946006-43946025 None:intergenic 25.0%
!! GAGTTATTAATGTTTAGTTC+TGG - chr2_4:43946092-43946111 Msa0329980:five_prime_UTR 25.0%
!! TCAAATTGGTTGATGATTGA+TGG - chr2_4:43940123-43940142 Msa0329980:three_prime_UTR 30.0%
TACAGATATGATTCATTCGA+CGG - chr2_4:43940220-43940239 Msa0329980:three_prime_UTR 30.0%
TTGATGAAAAGACGAATAGA+TGG - chr2_4:43940484-43940503 Msa0329980:three_prime_UTR 30.0%
!!! AGGTATTTTTTTCTTTTCCG+CGG - chr2_4:43940616-43940635 Msa0329980:three_prime_UTR 30.0%
!!! CACTTATTTTATTCTCGTGT+TGG + chr2_4:43940649-43940668 None:intergenic 30.0%
AGCATATATCGTTGAATAGA+TGG - chr2_4:43940744-43940763 Msa0329980:three_prime_UTR 30.0%
TTTCTCTTATATACCCACTT+GGG + chr2_4:43941014-43941033 None:intergenic 30.0%
TGGCTATATAGTTCAAATGA+TGG + chr2_4:43941101-43941120 None:intergenic 30.0%
! ATGGTTGTTGTTATTGCTTA+GGG - chr2_4:43941143-43941162 Msa0329980:intron 30.0%
CAATAACCAATCTTTGTTAG+GGG + chr2_4:43941243-43941262 None:intergenic 30.0%
GCAATAACCAATCTTTGTTA+GGG + chr2_4:43941244-43941263 None:intergenic 30.0%
AGCAATAACCAATCTTTGTT+AGG + chr2_4:43941245-43941264 None:intergenic 30.0%
CAAAAGTCATCCTAATTTCA+TGG + chr2_4:43941531-43941550 None:intergenic 30.0%
TTGCTTATAAATAAGGCTAG+AGG - chr2_4:43941548-43941567 Msa0329980:intron 30.0%
TGCTTATAAATAAGGCTAGA+GGG - chr2_4:43941549-43941568 Msa0329980:intron 30.0%
!!! TTGTTTTAAGAGAGATAAGG+GGG - chr2_4:43941588-43941607 Msa0329980:intron 30.0%
GGGCTTATTATAGTTGAATT+TGG - chr2_4:43941609-43941628 Msa0329980:intron 30.0%
ATAGATTATATCAGCCAAGA+AGG + chr2_4:43941635-43941654 None:intergenic 30.0%
AATATGTGCTTTACTTCATC+AGG - chr2_4:43941668-43941687 Msa0329980:intron 30.0%
!!! ATATTTTGGGAGCATTGTTA+TGG - chr2_4:43941703-43941722 Msa0329980:intron 30.0%
! GATTGAATATTTTGTGGAGA+TGG - chr2_4:43942019-43942038 Msa0329980:three_prime_UTR 30.0%
GTTCAACATCATTACAAACA+GGG + chr2_4:43942091-43942110 None:intergenic 30.0%
AGTTCAACATCATTACAAAC+AGG + chr2_4:43942092-43942111 None:intergenic 30.0%
TAGTCTAAGTAATTGACACA+AGG + chr2_4:43942246-43942265 None:intergenic 30.0%
ATTTCTACAAATGATTGTGC+AGG - chr2_4:43942336-43942355 Msa0329980:three_prime_UTR 30.0%
!! TTAAAAGTGATGGATTTGTG+TGG - chr2_4:43942523-43942542 Msa0329980:three_prime_UTR 30.0%
! TTGTTGATGCCATAATTTGT+GGG - chr2_4:43942554-43942573 Msa0329980:three_prime_UTR 30.0%
! ATAGTTGTTCTCAATCCTTT+TGG + chr2_4:43942602-43942621 None:intergenic 30.0%
AAAAGGATTGAGAACAACTA+TGG - chr2_4:43942601-43942620 Msa0329980:CDS 30.0%
! ATGGATATTTGTTTCTCCAA+TGG + chr2_4:43942775-43942794 None:intergenic 30.0%
ATTGGAGAAACAAATATCCA+TGG - chr2_4:43942774-43942793 Msa0329980:CDS 30.0%
GAAACAAATATCCATGGTAA+AGG - chr2_4:43942780-43942799 Msa0329980:CDS 30.0%
TTGTGGATGCAATTCAAAAA+TGG - chr2_4:43943144-43943163 Msa0329980:intron 30.0%
!! CAGCATCATTTTGATATATC+CGG + chr2_4:43943172-43943191 None:intergenic 30.0%
! GATGCTGATGATAATTTTCA+AGG - chr2_4:43943185-43943204 Msa0329980:intron 30.0%
ATGATACATCTTTGATACTG+TGG + chr2_4:43943434-43943453 None:intergenic 30.0%
TGCAAACTGTATTCCATAAA+AGG - chr2_4:43943545-43943564 Msa0329980:intron 30.0%
!!! GTCTTATTTTATGGTATGTG+GGG - chr2_4:43943613-43943632 Msa0329980:CDS 30.0%
! TCCCAAATGAATTTTCCAAA+AGG - chr2_4:43943820-43943839 Msa0329980:CDS 30.0%
!! TGAAGCATTGATGTTATTGT+TGG - chr2_4:43944058-43944077 Msa0329980:CDS 30.0%
TTGGAATATGTATATTTGGG+AGG - chr2_4:43944077-43944096 Msa0329980:CDS 30.0%
!!! ACAGCTGTTTTTCTATAAAC+TGG + chr2_4:43944518-43944537 None:intergenic 30.0%
! TGTTTTCAGAGATGTCATAA+TGG - chr2_4:43944671-43944690 Msa0329980:intron 30.0%
TCTGGATGTGATTATTTACA+GGG - chr2_4:43944783-43944802 Msa0329980:intron 30.0%
TCTTTGCCTATTATTTAAGC+TGG - chr2_4:43944932-43944951 Msa0329980:intron 30.0%
TGAGTTCCAGCTTAAATAAT+AGG + chr2_4:43944941-43944960 None:intergenic 30.0%
GTTTATATCTTATCTTGACC+AGG - chr2_4:43945003-43945022 Msa0329980:intron 30.0%
AGTATTGTTTGGAAACTCAT+TGG - chr2_4:43945098-43945117 Msa0329980:intron 30.0%
! ACATTTCATAAAGATGGACT+TGG + chr2_4:43945186-43945205 None:intergenic 30.0%
! GATTTTCAACCAAATTCGTT+TGG - chr2_4:43945260-43945279 Msa0329980:intron 30.0%
CAGTCATTCACAAGTTATAA+AGG - chr2_4:43945420-43945439 Msa0329980:intron 30.0%
TCCTTCATATAGGCAATTAA+GGG - chr2_4:43945745-43945764 Msa0329980:intron 30.0%
CAATAGAAGCGGAATAAATA+AGG + chr2_4:43945810-43945829 None:intergenic 30.0%
ATGGTTAAGTTCAATAGAAG+CGG + chr2_4:43945821-43945840 None:intergenic 30.0%
TCTATTGAACTTAACCATGA+AGG - chr2_4:43945823-43945842 Msa0329980:intron 30.0%
! GGTGTGTTGTAAAATTTTGT+AGG - chr2_4:43945905-43945924 Msa0329980:CDS 30.0%
!!! AATCCTTATTTTGAGCTGTT+AGG - chr2_4:43946028-43946047 Msa0329980:five_prime_UTR 30.0%
GGCTATGTTACAGTTATATT+AGG - chr2_4:43946049-43946068 Msa0329980:five_prime_UTR 30.0%
AAAAGACGAATAGATGGAAG+TGG - chr2_4:43940490-43940509 Msa0329980:three_prime_UTR 35.0%
CAAGAAAAGCAGCAATTGAT+CGG + chr2_4:43940551-43940570 None:intergenic 35.0%
! AGATGGTAGAAACCCATTTT+AGG - chr2_4:43940761-43940780 Msa0329980:three_prime_UTR 35.0%
GTTTCTCTTATATACCCACT+TGG + chr2_4:43941015-43941034 None:intergenic 35.0%
! CATGGTTGTTGTTATTGCTT+AGG - chr2_4:43941142-43941161 Msa0329980:intron 35.0%
! TGGTTGTTGTTATTGCTTAG+GGG - chr2_4:43941144-43941163 Msa0329980:intron 35.0%
! GTGACTTTTGCTTATGTTTG+AGG - chr2_4:43941505-43941524 Msa0329980:three_prime_UTR 35.0%
! ATGTTTGAGGCCATGAAATT+AGG - chr2_4:43941518-43941537 Msa0329980:three_prime_UTR 35.0%
!!! TGTTTTAAGAGAGATAAGGG+GGG - chr2_4:43941589-43941608 Msa0329980:intron 35.0%
! ATAGTTGAATTTGGCCTTCT+TGG - chr2_4:43941618-43941637 Msa0329980:intron 35.0%
! GAATCTGCTGCTGATATTTT+GGG - chr2_4:43941690-43941709 Msa0329980:intron 35.0%
TTTGATGCCATGCTTAACAA+GGG + chr2_4:43941750-43941769 None:intergenic 35.0%
ATTTGATGCCATGCTTAACA+AGG + chr2_4:43941751-43941770 None:intergenic 35.0%
TAGACAAGATCCAACAAACA+CGG + chr2_4:43941819-43941838 None:intergenic 35.0%
AAATTCAAAGCAGTAGCACA+AGG + chr2_4:43941888-43941907 None:intergenic 35.0%
! TTGTGCTACTGCTTTGAATT+TGG - chr2_4:43941887-43941906 Msa0329980:intron 35.0%
GTTCGAAATATAAAAGACCG+CGG - chr2_4:43941987-43942006 Msa0329980:three_prime_UTR 35.0%
! TTTTGAGCACAATTCTGTTG+AGG - chr2_4:43942048-43942067 Msa0329980:three_prime_UTR 35.0%
CTAAAGCTGTACACATCTTT+AGG - chr2_4:43942170-43942189 Msa0329980:three_prime_UTR 35.0%
!!! TTTTTGTTTTGTTGAGGGGA+AGG + chr2_4:43942217-43942236 None:intergenic 35.0%
TGTAGCACAAAAGCTTATAG+AGG - chr2_4:43942303-43942322 Msa0329980:three_prime_UTR 35.0%
AATCTAACCCTCATGATGTT+CGG - chr2_4:43942368-43942387 Msa0329980:three_prime_UTR 35.0%
CTTGTTGATGCCATAATTTG+TGG - chr2_4:43942553-43942572 Msa0329980:three_prime_UTR 35.0%
!!! TTCTCAATCCTTTTGGAACA+CGG + chr2_4:43942595-43942614 None:intergenic 35.0%
! CAACTATGGTTCTGTATTAG+TGG - chr2_4:43942615-43942634 Msa0329980:CDS 35.0%
! ATTAGTGGAAGCATGTAAGT+TGG - chr2_4:43942630-43942649 Msa0329980:CDS 35.0%
! GCAATCATCATATCAGGTTT+TGG - chr2_4:43942674-43942693 Msa0329980:CDS 35.0%
!!! CATATCAGGTTTTGGAAACA+AGG - chr2_4:43942682-43942701 Msa0329980:CDS 35.0%
GCAAAACAATTTCGGAAGAT+TGG + chr2_4:43942753-43942772 None:intergenic 35.0%
!! TTCCGAAATTGTTTTGCCAT+TGG - chr2_4:43942756-43942775 Msa0329980:CDS 35.0%
CTCCAATGGCAAAACAATTT+CGG + chr2_4:43942761-43942780 None:intergenic 35.0%
ACAAATATCCATGGTAAAGG+AGG - chr2_4:43942783-43942802 Msa0329980:CDS 35.0%
CAAATATCCATGGTAAAGGA+GGG - chr2_4:43942784-43942803 Msa0329980:CDS 35.0%
TCAATTATCATGTTGCTCTG+AGG - chr2_4:43942815-43942834 Msa0329980:CDS 35.0%
GATATGAAGTTCACTCTCAT+GGG + chr2_4:43942910-43942929 None:intergenic 35.0%
TGATATGAAGTTCACTCTCA+TGG + chr2_4:43942911-43942930 None:intergenic 35.0%
CTTCAAGTGTGTGTATACAT+TGG - chr2_4:43942989-43943008 Msa0329980:CDS 35.0%
AAATGTGAAGCTGCAGAAAA+AGG + chr2_4:43943126-43943145 None:intergenic 35.0%
ATGCAATTCAAAAATGGTGC+CGG - chr2_4:43943150-43943169 Msa0329980:intron 35.0%
ATTAAAACAGCCCTTGATAC+TGG + chr2_4:43943215-43943234 None:intergenic 35.0%
GCATGTGAGGAAATATTACA+TGG + chr2_4:43943251-43943270 None:intergenic 35.0%
TAATACAGATCTAGCATGTG+AGG + chr2_4:43943264-43943283 None:intergenic 35.0%
AGATGTATCATAGAAAGCAG+AGG - chr2_4:43943443-43943462 Msa0329980:CDS 35.0%
GATGTATCATAGAAAGCAGA+GGG - chr2_4:43943444-43943463 Msa0329980:CDS 35.0%
GCAAAGGAATGTCTAGTAAA+AGG + chr2_4:43943666-43943685 None:intergenic 35.0%
TCCTTTGCAATTTAGTAGAG+AGG - chr2_4:43943678-43943697 Msa0329980:CDS 35.0%
ACCTCTCTACTAAATTGCAA+AGG + chr2_4:43943682-43943701 None:intergenic 35.0%
AAAACATACCATTTCACTCC+AGG + chr2_4:43943769-43943788 None:intergenic 35.0%
GATTGGGAACTCTCTTAATA+AGG - chr2_4:43943842-43943861 Msa0329980:CDS 35.0%
AATAACACCATGAACACTCA+CGG + chr2_4:43943910-43943929 None:intergenic 35.0%
GATGAAGTAAGATTCAAGCT+GGG + chr2_4:43944221-43944240 None:intergenic 35.0%
AGATGAAGTAAGATTCAAGC+TGG + chr2_4:43944222-43944241 None:intergenic 35.0%
!!! GCTGGAAGTTATTTTTCGTA+TGG - chr2_4:43944251-43944270 Msa0329980:CDS 35.0%
AAGCTACTCAAGTATATGGA+AGG + chr2_4:43944375-43944394 None:intergenic 35.0%
AAGGAAGCTACTCAAGTATA+TGG + chr2_4:43944379-43944398 None:intergenic 35.0%
ATAAGAGTTGCGTTTCTGAA+AGG - chr2_4:43944437-43944456 Msa0329980:CDS 35.0%
TCTGAAAGGACTGTTAAACT+TGG - chr2_4:43944451-43944470 Msa0329980:CDS 35.0%
ACTTTGTGAACATGCATATG+TGG + chr2_4:43944753-43944772 None:intergenic 35.0%
CACAAAGTTATATTGCAGTC+TGG - chr2_4:43944765-43944784 Msa0329980:intron 35.0%
GTCTGGATGTGATTATTTAC+AGG - chr2_4:43944782-43944801 Msa0329980:intron 35.0%
ATCTTCATCACTCGTTTATC+AGG + chr2_4:43944888-43944907 None:intergenic 35.0%
AAGGATATCCCAAACGAATT+TGG + chr2_4:43945272-43945291 None:intergenic 35.0%
ATTCAATTTGCAGCCATATG+TGG - chr2_4:43945555-43945574 Msa0329980:intron 35.0%
!!! CTGGATTTTGGAAAGTATTC+AGG - chr2_4:43945600-43945619 Msa0329980:intron 35.0%
CTCCTTCATATAGGCAATTA+AGG - chr2_4:43945744-43945763 Msa0329980:intron 35.0%
TCCCTTAATTGCCTATATGA+AGG + chr2_4:43945749-43945768 None:intergenic 35.0%
!! TAAAGCGTTTTTCACCTTCA+TGG + chr2_4:43945840-43945859 None:intergenic 35.0%
ATGAAGGTGAAAAACGCTTT+AGG - chr2_4:43945839-43945858 Msa0329980:intron 35.0%
TAGCCTAACAGCTCAAAATA+AGG + chr2_4:43946034-43946053 None:intergenic 35.0%
GGTAACTGTTACAGTTAGTT+AGG - chr2_4:43946070-43946089 Msa0329980:five_prime_UTR 35.0%
GGTTTAAGGAATGGAGAAGA+CGG + chr2_4:43940322-43940341 None:intergenic 40.0%
CTTCTCCATTCCTTAAACCT+TGG - chr2_4:43940323-43940342 Msa0329980:three_prime_UTR 40.0%
! TGGTAGAAACCCATTTTAGG+TGG - chr2_4:43940764-43940783 Msa0329980:three_prime_UTR 40.0%
!! AAACCCATTTTAGGTGGTCT+CGG - chr2_4:43940770-43940789 Msa0329980:three_prime_UTR 40.0%
AGGACTATAGAATCCACAAC+AGG + chr2_4:43940811-43940830 None:intergenic 40.0%
ATAGTCCTTAGTAGACCAGA+TGG - chr2_4:43940823-43940842 Msa0329980:intron 40.0%
!! TTGCTCCCTAGTTTTTGCTA+TGG - chr2_4:43941168-43941187 Msa0329980:intron 40.0%
GCTCTCCATAGCAAAAACTA+GGG + chr2_4:43941176-43941195 None:intergenic 40.0%
ATTGGACCCCTAACAAAGAT+TGG - chr2_4:43941234-43941253 Msa0329980:intron 40.0%
! GATTGGTTATTGCTAAACGG+CGG - chr2_4:43941251-43941270 Msa0329980:intron 40.0%
! GGAATCTGCTGCTGATATTT+TGG - chr2_4:43941689-43941708 Msa0329980:intron 40.0%
AAATGAGCCCTTGTTAAGCA+TGG - chr2_4:43941740-43941759 Msa0329980:intron 40.0%
GTTAAGCATGGCATCAAATG+TGG - chr2_4:43941752-43941771 Msa0329980:intron 40.0%
AACAAACACGGTTGCAATAG+TGG + chr2_4:43941807-43941826 None:intergenic 40.0%
ACTATTGCAACCGTGTTTGT+TGG - chr2_4:43941806-43941825 Msa0329980:intron 40.0%
TGCAACTTCTACTTGATGTG+AGG + chr2_4:43941862-43941881 None:intergenic 40.0%
TCTGAGTGCTACAAGTGAAA+AGG - chr2_4:43941920-43941939 Msa0329980:intron 40.0%
GCACAAAAGCTTATAGAGGA+TGG - chr2_4:43942307-43942326 Msa0329980:three_prime_UTR 40.0%
CTCTCTCATCCCACAAATTA+TGG + chr2_4:43942566-43942585 None:intergenic 40.0%
! AGTTGGCTCAAATTACTCGT+TGG - chr2_4:43942647-43942666 Msa0329980:CDS 40.0%
! GTTGGCTCAAATTACTCGTT+GGG - chr2_4:43942648-43942667 Msa0329980:CDS 40.0%
CTCTCATGGGTATAACTACA+GGG + chr2_4:43942897-43942916 None:intergenic 40.0%
ACTCTCATGGGTATAACTAC+AGG + chr2_4:43942898-43942917 None:intergenic 40.0%
! ACTTACTGATTACGTGTGCA+TGG - chr2_4:43942931-43942950 Msa0329980:CDS 40.0%
TCAGTGGTAGGAAGAAACTA+TGG + chr2_4:43943034-43943053 None:intergenic 40.0%
GCACAACATCAATGGAATGA+AGG + chr2_4:43943095-43943114 None:intergenic 40.0%
TTTCTGCAGCTTCACATTTG+TGG - chr2_4:43943127-43943146 Msa0329980:intron 40.0%
TTCAAGGTGAACCAGTATCA+AGG - chr2_4:43943201-43943220 Msa0329980:intron 40.0%
TCAAGGTGAACCAGTATCAA+GGG - chr2_4:43943202-43943221 Msa0329980:intron 40.0%
TCTGATATACTGAAGGTCGT+AGG - chr2_4:43943284-43943303 Msa0329980:intron 40.0%
TATTCATGTAGAAAGGCCAG+AGG - chr2_4:43943511-43943530 Msa0329980:CDS 40.0%
!! TCCATAAAAGGTCTTGTTGC+TGG - chr2_4:43943557-43943576 Msa0329980:intron 40.0%
! TCCAGCAACAAGACCTTTTA+TGG + chr2_4:43943561-43943580 None:intergenic 40.0%
!! AAAAGGTCTTGTTGCTGGAT+TGG - chr2_4:43943562-43943581 Msa0329980:intron 40.0%
!! TCTTGTTGCTGGATTGGTAA+AGG - chr2_4:43943568-43943587 Msa0329980:intron 40.0%
! AAGAGAGTTCCCAATCCTTT+TGG + chr2_4:43943838-43943857 None:intergenic 40.0%
TTGCGACTCATTGTAGCAAA+TGG - chr2_4:43943879-43943898 Msa0329980:CDS 40.0%
TGCGACTCATTGTAGCAAAT+GGG - chr2_4:43943880-43943899 Msa0329980:CDS 40.0%
CTACTAGATAGCACTTCTGA+AGG + chr2_4:43943960-43943979 None:intergenic 40.0%
TTTGCAGACAATCTCCAAAG+TGG - chr2_4:43944183-43944202 Msa0329980:CDS 40.0%
TTGCAGACAATCTCCAAAGT+GGG - chr2_4:43944184-43944203 Msa0329980:CDS 40.0%
GTAAGATTCAAGCTGGGAAA+AGG + chr2_4:43944215-43944234 None:intergenic 40.0%
ACTTCATCTCTTGATTCAGC+TGG - chr2_4:43944233-43944252 Msa0329980:CDS 40.0%
! GCTAAATTGAATGGGCTTGT+TGG - chr2_4:43944696-43944715 Msa0329980:intron 40.0%
!! AATTGAATGGGCTTGTTGGA+TGG - chr2_4:43944700-43944719 Msa0329980:intron 40.0%
!! ATTGAATGGGCTTGTTGGAT+GGG - chr2_4:43944701-43944720 Msa0329980:intron 40.0%
TGAACATGCATATGTGGTAC+TGG + chr2_4:43944747-43944766 None:intergenic 40.0%
! TTACAGGGTTTGTTCAGATC+AGG - chr2_4:43944798-43944817 Msa0329980:intron 40.0%
ACCTGTTCTGTGGTTGATTA+AGG - chr2_4:43945035-43945054 Msa0329980:intron 40.0%
AGTTAACAGAGCACAAGAGA+TGG + chr2_4:43945338-43945357 None:intergenic 40.0%
TAACCCACAAACAACCAGAA+GGG + chr2_4:43945513-43945532 None:intergenic 40.0%
TTAACCCACAAACAACCAGA+AGG + chr2_4:43945514-43945533 None:intergenic 40.0%
! TGGTTGTTTGTGGGTTAACA+TGG - chr2_4:43945516-43945535 Msa0329980:intron 40.0%
! AAAGTATTCAGGAAGCTTGC+TGG - chr2_4:43945611-43945630 Msa0329980:intron 40.0%
GTCTGATTCTTCTAAGCAGT+TGG - chr2_4:43945650-43945669 Msa0329980:intron 40.0%
ATGCCTATAAGCTCTCTTTG+TGG - chr2_4:43945690-43945709 Msa0329980:intron 40.0%
CTTCCACAAAGAGAGCTTAT+AGG + chr2_4:43945696-43945715 None:intergenic 40.0%
TAAGCTCTCTTTGTGGAAGT+TGG - chr2_4:43945697-43945716 Msa0329980:intron 40.0%
GTCTCATAGCTCCTTCATAT+AGG - chr2_4:43945735-43945754 Msa0329980:CDS 40.0%
! TTTTACGGTGCAGAAGATTC+AGG - chr2_4:43945884-43945903 Msa0329980:intron 40.0%
GATTAGCAACTCTCTCTCGA+CGG - chr2_4:43940182-43940201 Msa0329980:three_prime_UTR 45.0%
GATTCATTCGACGGTGAAAG+CGG - chr2_4:43940229-43940248 Msa0329980:three_prime_UTR 45.0%
! TGGTGCCAAGGTTTAAGGAA+TGG + chr2_4:43940331-43940350 None:intergenic 45.0%
ATTCCTTAAACCTTGGCACC+AGG - chr2_4:43940330-43940349 Msa0329980:three_prime_UTR 45.0%
CTTAACGATGGTATGACGTG+TGG + chr2_4:43940598-43940617 None:intergenic 45.0%
CACACGTCATACCATCGTTA+AGG - chr2_4:43940596-43940615 Msa0329980:three_prime_UTR 45.0%
ATGCCGAGACCACCTAAAAT+GGG + chr2_4:43940776-43940795 None:intergenic 45.0%
TCCTTAGTAGACCAGATGGA+GGG - chr2_4:43940827-43940846 Msa0329980:intron 45.0%
CTAAACTAGCCCACCGAAAT+TGG - chr2_4:43940915-43940934 Msa0329980:intron 45.0%
ATGCCTTATCCCACTAAACG+GGG + chr2_4:43941125-43941144 None:intergenic 45.0%
CATGCCTTATCCCACTAAAC+GGG + chr2_4:43941126-43941145 None:intergenic 45.0%
CCATGCCTTATCCCACTAAA+CGG + chr2_4:43941127-43941146 None:intergenic 45.0%
GGCTCTCCATAGCAAAAACT+AGG + chr2_4:43941177-43941196 None:intergenic 45.0%
! TTTGCTATGGAGAGCCTAAC+TGG - chr2_4:43941181-43941200 Msa0329980:intron 45.0%
TTGCTATGGAGAGCCTAACT+GGG - chr2_4:43941182-43941201 Msa0329980:intron 45.0%
TACTTGATGTGAGGACAGCA+AGG + chr2_4:43941853-43941872 None:intergenic 45.0%
ATTCAATCTTCTGTGCACCG+CGG + chr2_4:43942007-43942026 None:intergenic 45.0%
TGAGCACAATTCTGTTGAGG+TGG - chr2_4:43942051-43942070 Msa0329980:three_prime_UTR 45.0%
CAAACAGGGAACCTAGATGA+AGG + chr2_4:43942077-43942096 None:intergenic 45.0%
GTTGAGGGGAAGGTAAAAGA+TGG + chr2_4:43942207-43942226 None:intergenic 45.0%
ACAAATGATTGTGCAGGCGA+TGG - chr2_4:43942342-43942361 Msa0329980:three_prime_UTR 45.0%
CAAATGATTGTGCAGGCGAT+GGG - chr2_4:43942343-43942362 Msa0329980:three_prime_UTR 45.0%
CCTCTATCCGAACATCATGA+GGG + chr2_4:43942378-43942397 None:intergenic 45.0%
CCTCATGATGTTCGGATAGA+GGG - chr2_4:43942376-43942395 Msa0329980:three_prime_UTR 45.0%
CTCATGATGTTCGGATAGAG+GGG - chr2_4:43942377-43942396 Msa0329980:three_prime_UTR 45.0%
ATGTTCGGATAGAGGGGTTT+CGG - chr2_4:43942383-43942402 Msa0329980:three_prime_UTR 45.0%
! TCGGCTTGCTCAATGTCTAT+TGG - chr2_4:43942402-43942421 Msa0329980:three_prime_UTR 45.0%
ATTTGTGGGATGAGAGAGAC+AGG - chr2_4:43942568-43942587 Msa0329980:three_prime_UTR 45.0%
TTTGTGGGATGAGAGAGACA+GGG - chr2_4:43942569-43942588 Msa0329980:three_prime_UTR 45.0%
TTTCAGTCCCTCCTTTACCA+TGG + chr2_4:43942794-43942813 None:intergenic 45.0%
!! TTGCTCTGAGGAGTTATGTG+TGG - chr2_4:43942827-43942846 Msa0329980:CDS 45.0%
!! TGCTCTGAGGAGTTATGTGT+GGG - chr2_4:43942828-43942847 Msa0329980:CDS 45.0%
AGTTATGTGTGGGACGTTCT+TGG - chr2_4:43942838-43942857 Msa0329980:CDS 45.0%
GTTATGTGTGGGACGTTCTT+GGG - chr2_4:43942839-43942858 Msa0329980:CDS 45.0%
GGGTGGCTTACAATTCATTG+TGG - chr2_4:43942859-43942878 Msa0329980:CDS 45.0%
TTGCAAATGAGAGCAACCTC+TGG + chr2_4:43943530-43943549 None:intergenic 45.0%
!! CTGGATTGGTAAAGGAGACT+GGG - chr2_4:43943576-43943595 Msa0329980:intron 45.0%
ATTGGTAAAGGAGACTGGGA+AGG - chr2_4:43943580-43943599 Msa0329980:intron 45.0%
TTTCACTCCAGGACTGAAAG+AGG + chr2_4:43943758-43943777 None:intergenic 45.0%
CTTTCAGTCCTGGAGTGAAA+TGG - chr2_4:43943758-43943777 Msa0329980:intron 45.0%
GCGACTCATTGTAGCAAATG+GGG - chr2_4:43943881-43943900 Msa0329980:CDS 45.0%
! ACTTCTGAAGGTAGAAGTGC+TGG + chr2_4:43943948-43943967 None:intergenic 45.0%
! CTGCAAAGCATTTGCAAGAG+AGG + chr2_4:43944170-43944189 None:intergenic 45.0%
TGCAGACAATCTCCAAAGTG+GGG - chr2_4:43944185-43944204 Msa0329980:CDS 45.0%
TCAGATCAGGAATGCAAGAG+AGG - chr2_4:43944811-43944830 Msa0329980:intron 45.0%
AGAACAGGTTACATAGACCC+TGG + chr2_4:43945024-43945043 None:intergenic 45.0%
GGTCTATGTAACCTGTTCTG+TGG - chr2_4:43945025-43945044 Msa0329980:intron 45.0%
GCCTTAATCAACCACAGAAC+AGG + chr2_4:43945039-43945058 None:intergenic 45.0%
AGAATTGGCTGAAAGCTAGC+TGG - chr2_4:43945158-43945177 Msa0329980:intron 45.0%
AAACAACCAGAAGGGGGATT+TGG + chr2_4:43945505-43945524 None:intergenic 45.0%
AACCCACAAACAACCAGAAG+GGG + chr2_4:43945512-43945531 None:intergenic 45.0%
! AGCCATATGTGGAGCTTTGT+TGG - chr2_4:43945566-43945585 Msa0329980:intron 45.0%
AGCCAACAAAGCTCCACATA+TGG + chr2_4:43945571-43945590 None:intergenic 45.0%
!! TATGTGGAGCTTTGTTGGCT+TGG - chr2_4:43945571-43945590 Msa0329980:intron 45.0%
!! TTTGTTGGCTTGGTGAGTTC+TGG - chr2_4:43945581-43945600 Msa0329980:intron 45.0%
!!! GCTTGGTGAGTTCTGGATTT+TGG - chr2_4:43945588-43945607 Msa0329980:intron 45.0%
! TTTTCTTGCAGCCTACTGAC+AGG + chr2_4:43946124-43946143 None:intergenic 45.0%
AGTAGGCTGCAAGAAAAGCT+TGG - chr2_4:43946127-43946146 Msa0329980:five_prime_UTR 45.0%
GTAGGCTGCAAGAAAAGCTT+GGG - chr2_4:43946128-43946147 Msa0329980:five_prime_UTR 45.0%
ATGGAGAAGACGGCGATGAA+GGG + chr2_4:43940312-43940331 None:intergenic 50.0%
AATGGAGAAGACGGCGATGA+AGG + chr2_4:43940313-43940332 None:intergenic 50.0%
! AGACCTGGTGCCAAGGTTTA+AGG + chr2_4:43940336-43940355 None:intergenic 50.0%
!! CTCGTGTTGGTTCTTTACCG+CGG + chr2_4:43940636-43940655 None:intergenic 50.0%
CATGCCGAGACCACCTAAAA+TGG + chr2_4:43940777-43940796 None:intergenic 50.0%
!! TTTTAGGTGGTCTCGGCATG+TGG - chr2_4:43940777-43940796 Msa0329980:three_prime_UTR 50.0%
TGTGGAGAGAAGACCTGTTG+TGG - chr2_4:43940795-43940814 Msa0329980:three_prime_UTR 50.0%
GTCCTTAGTAGACCAGATGG+AGG - chr2_4:43940826-43940845 Msa0329980:intron 50.0%
ACCCTCCATCTGGTCTACTA+AGG + chr2_4:43940831-43940850 None:intergenic 50.0%
TTAGTAGACCAGATGGAGGG+TGG - chr2_4:43940830-43940849 Msa0329980:intron 50.0%
! GATTCTCCCGGTGCCAATTT+CGG + chr2_4:43940931-43940950 None:intergenic 50.0%
GAATCGAACCTGAGACCTTG+AGG - chr2_4:43940946-43940965 Msa0329980:intron 50.0%
!! ATGGTGTTGGCTTGTGTCCT+TGG + chr2_4:43940983-43941002 None:intergenic 50.0%
!! TTGGGTTGACCTGATGGTGT+TGG + chr2_4:43940996-43941015 None:intergenic 50.0%
ACCATCAGGTCAACCCAAGT+GGG - chr2_4:43940998-43941017 Msa0329980:intron 50.0%
ATATAGCCAGCCCCGTTTAG+TGG - chr2_4:43941112-43941131 Msa0329980:intron 50.0%
TATAGCCAGCCCCGTTTAGT+GGG - chr2_4:43941113-43941132 Msa0329980:intron 50.0%
CCGTTTAGTGGGATAAGGCA+TGG - chr2_4:43941124-43941143 Msa0329980:intron 50.0%
!! CACGGTTGCAATAGTGGACT+CGG + chr2_4:43941801-43941820 None:intergenic 50.0%
TGTTGAGGTGGCCTTCATCT+AGG - chr2_4:43942063-43942082 Msa0329980:three_prime_UTR 50.0%
CCCTCATGATGTTCGGATAG+AGG - chr2_4:43942375-43942394 Msa0329980:three_prime_UTR 50.0%
CCCTCTATCCGAACATCATG+AGG + chr2_4:43942379-43942398 None:intergenic 50.0%
GCTCAAATTACTCGTTGGGC+TGG - chr2_4:43942652-43942671 Msa0329980:CDS 50.0%
! GGGCTGGCAATCATCATATC+AGG - chr2_4:43942668-43942687 Msa0329980:CDS 50.0%
!! GCTGGATTGGTAAAGGAGAC+TGG - chr2_4:43943575-43943594 Msa0329980:intron 50.0%
AGTAGCACCTCTTTCAGTCC+TGG - chr2_4:43943748-43943767 Msa0329980:intron 50.0%
AGGGGGATTTGGAAGCTCAT+CGG + chr2_4:43945494-43945513 None:intergenic 50.0%
! ATCCCCCTTCTGGTTGTTTG+TGG - chr2_4:43945506-43945525 Msa0329980:intron 50.0%
! TCCCCCTTCTGGTTGTTTGT+GGG - chr2_4:43945507-43945526 Msa0329980:intron 50.0%
ACCCACAAACAACCAGAAGG+GGG + chr2_4:43945511-43945530 None:intergenic 50.0%
TCTGGCAAAGTCCTGTCAGT+AGG - chr2_4:43946110-43946129 Msa0329980:five_prime_UTR 50.0%
GAGAGAGAGAGAGAGAGACC+TGG + chr2_4:43940351-43940370 None:intergenic 55.0%
CGATTTGACCACCCTCCATC+TGG + chr2_4:43940841-43940860 None:intergenic 55.0%
TAGCCCACCGAAATTGGCAC+CGG - chr2_4:43940921-43940940 Msa0329980:intron 55.0%
GGTCTCAGGTTCGATTCTCC+CGG + chr2_4:43940943-43940962 None:intergenic 55.0%
TCGAACCTGAGACCTTGAGG+AGG - chr2_4:43940949-43940968 Msa0329980:intron 55.0%
TTGGAGTGTGGTCCTCCTCA+AGG + chr2_4:43940964-43940983 None:intergenic 55.0%
TTGAGGAGGACCACACTCCA+AGG - chr2_4:43940963-43940982 Msa0329980:intron 55.0%
! TGGCTTGTGTCCTTGGAGTG+TGG + chr2_4:43940976-43940995 None:intergenic 55.0%
GGACACAAGCCAACACCATC+AGG - chr2_4:43940984-43941003 Msa0329980:intron 55.0%
CACCATCAGGTCAACCCAAG+TGG - chr2_4:43940997-43941016 Msa0329980:intron 55.0%
!! ACCCACTTGGGTTGACCTGA+TGG + chr2_4:43941002-43941021 None:intergenic 55.0%
CTTATCCCACTAAACGGGGC+TGG + chr2_4:43941121-43941140 None:intergenic 55.0%
CAGCCCCGTTTAGTGGGATA+AGG - chr2_4:43941119-43941138 Msa0329980:intron 55.0%
TATGGAGAGCCTAACTGGGC+AGG - chr2_4:43941186-43941205 Msa0329980:intron 55.0%
ATGGAGAGCCTAACTGGGCA+GGG - chr2_4:43941187-43941206 Msa0329980:intron 55.0%
AAGGTTCTCCCTGCCCAGTT+AGG + chr2_4:43941198-43941217 None:intergenic 55.0%
AGACAGGGCCGTGTTCCAAA+AGG - chr2_4:43942584-43942603 Msa0329980:exon 55.0%
ATGTGTGGGACGTTCTTGGG+TGG - chr2_4:43942842-43942861 Msa0329980:CDS 55.0%
GGGGATTCCGTGAGTGTTCA+TGG - chr2_4:43943900-43943919 Msa0329980:CDS 55.0%
! GGAAAAGGTGTGCCCCACTT+TGG + chr2_4:43944200-43944219 None:intergenic 55.0%
GAGCTTCCAAATCCCCCTTC+TGG - chr2_4:43945496-43945515 Msa0329980:intron 55.0%
! GAGAGAGAGACCTGGTGCCA+AGG + chr2_4:43940343-43940362 None:intergenic 60.0%
AGCCCACCGAAATTGGCACC+GGG - chr2_4:43940922-43940941 Msa0329980:intron 60.0%
! CTCCCGGTGCCAATTTCGGT+GGG + chr2_4:43940927-43940946 None:intergenic 60.0%
! TCTCCCGGTGCCAATTTCGG+TGG + chr2_4:43940928-43940947 None:intergenic 60.0%
GTGGTCCTCCTCAAGGTCTC+AGG + chr2_4:43940957-43940976 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 43940068 43946173 43940068 ID=Msa0329980;Name=Msa0329980
chr2_4 mRNA 43940068 43946173 43940068 ID=Msa0329980-mRNA-1;Parent=Msa0329980;Name=Msa0329980-mRNA-1;_AED=0.13;_eAED=0.13;_QI=159|0.55|0.5|1|0.66|0.5|10|1531|543
chr2_4 exon 43940068 43940818 43940068 ID=Msa0329980-mRNA-1:exon:13423;Parent=Msa0329980-mRNA-1
chr2_4 exon 43941409 43941561 43941409 ID=Msa0329980-mRNA-1:exon:13422;Parent=Msa0329980-mRNA-1
chr2_4 exon 43941974 43943105 43941974 ID=Msa0329980-mRNA-1:exon:13421;Parent=Msa0329980-mRNA-1
chr2_4 exon 43943381 43943551 43943381 ID=Msa0329980-mRNA-1:exon:13420;Parent=Msa0329980-mRNA-1
chr2_4 exon 43943594 43943736 43943594 ID=Msa0329980-mRNA-1:exon:13419;Parent=Msa0329980-mRNA-1
chr2_4 exon 43943818 43943951 43943818 ID=Msa0329980-mRNA-1:exon:13418;Parent=Msa0329980-mRNA-1
chr2_4 exon 43944050 43944295 43944050 ID=Msa0329980-mRNA-1:exon:13417;Parent=Msa0329980-mRNA-1
chr2_4 exon 43944308 43944551 43944308 ID=Msa0329980-mRNA-1:exon:13416;Parent=Msa0329980-mRNA-1
chr2_4 exon 43945699 43945762 43945699 ID=Msa0329980-mRNA-1:exon:13415;Parent=Msa0329980-mRNA-1
chr2_4 exon 43945890 43946173 43945890 ID=Msa0329980-mRNA-1:exon:13414;Parent=Msa0329980-mRNA-1
chr2_4 five_prime_UTR 43946015 43946173 43946015 ID=Msa0329980-mRNA-1:five_prime_utr;Parent=Msa0329980-mRNA-1
chr2_4 CDS 43945890 43946014 43945890 ID=Msa0329980-mRNA-1:cds;Parent=Msa0329980-mRNA-1
chr2_4 CDS 43945699 43945762 43945699 ID=Msa0329980-mRNA-1:cds;Parent=Msa0329980-mRNA-1
chr2_4 CDS 43944308 43944551 43944308 ID=Msa0329980-mRNA-1:cds;Parent=Msa0329980-mRNA-1
chr2_4 CDS 43944050 43944295 43944050 ID=Msa0329980-mRNA-1:cds;Parent=Msa0329980-mRNA-1
chr2_4 CDS 43943818 43943951 43943818 ID=Msa0329980-mRNA-1:cds;Parent=Msa0329980-mRNA-1
chr2_4 CDS 43943594 43943736 43943594 ID=Msa0329980-mRNA-1:cds;Parent=Msa0329980-mRNA-1
chr2_4 CDS 43943381 43943551 43943381 ID=Msa0329980-mRNA-1:cds;Parent=Msa0329980-mRNA-1
chr2_4 CDS 43942601 43943105 43942601 ID=Msa0329980-mRNA-1:cds;Parent=Msa0329980-mRNA-1
chr2_4 three_prime_UTR 43941974 43942600 43941974 ID=Msa0329980-mRNA-1:three_prime_utr;Parent=Msa0329980-mRNA-1
chr2_4 three_prime_UTR 43941409 43941561 43941409 ID=Msa0329980-mRNA-1:three_prime_utr;Parent=Msa0329980-mRNA-1
chr2_4 three_prime_UTR 43940068 43940818 43940068 ID=Msa0329980-mRNA-1:three_prime_utr;Parent=Msa0329980-mRNA-1
Gene Sequence

>Msa0329980

ATGATTCATTCGACGGTGAAAGCGGCAACTGCAAAAGAAAAAGAAAAAGATAACGATCGGAGCTTGAGTTCTCACATCATCACCCTTCATCGCCGTCTTCTCCATTCCTTAAACCTTGGCACCAGATATTTTGATGAAAAGACGAATAGATGGAAGTGGCAGTGCGTCAACATTGAAGTACAGAAAAATGAATCTGCTGCTGATATTTTGGGAGCATTGTTATGGATTCTTCAATGCAAAAATGAGCCCTTGTTAAGCATGGCATCAAATGTGGCAGTGAAATTAGTTAGTATTTTACCGAGTCCACTATTGCAACCGTGTTTGTTGGATCTTGTCTATTATTTATCGTCCTTGCTGTCCTCACATCAAGTAGAAGTTGCAATACCTTGTGCTACTGCTTTGAATTTGGTAATCTCAAATCTGAGTGCTACAATTATTGAAGCACTGAAAGAAACAGAGATTTCCATTTGCATTGTTCGAAATATAAAAGACCGCGGTGCACAGAAGATTGAATATTTTGTGGAGATGGCTTCACTTTTGAGCACAATTCTGTTGAGGTGGCCTTCATCTAGGTTCCCTGTTTGTAATGATGTTGAACTTATGAAAGTTTTAGCAAACATGCTTACAAGTACAGATAGTTCTATTAAACTTGTTCTTCTAAAGCTGTACACATCTTTAGCTTTATGTGATTCTGTAGCACAAAAGCTTATAGAGGATGGAAAAGTATTTCTACAAATGATTGTGCAGGCGATGGGAAAATCTAACCCTCATGATGTTCGGATAGAGGGGTTTCGGCTTGCTCAATGTCTATTGAGATCCCAAGAAAATTGTTTAAAAGTGATGGATTTGTGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGAGAGAGACAGGGCCGTGTTCCAAAAGGATTGAGAACAACTATGGTTCTGTATTAGTGGAAGCATGTAAGTTTTGGAAACAAGGAATTGATAAAGTCCTCCTTAATCTTCTAATTGAAAATATTCATGACCAATCTTCCGAAATTGTTTTGCCATTGGAGAAACAAATATCCATGGTAAAGGAGGGACTGAAACTCAATTATCATGTTGCTCTGAGGAGTTATGTGTGGGACGTTCTTGGCTTCACATTTGTGGATGCAATTCAAAAATGGTGCCGGATATATCAAAATGATGCTGATGATAATTTTCAAGGTGAACCAGTATCAAGGGCTGTTTTAATGATGATATATTCTCCATGTAATATTTCCTCACATGCTAGATCTGTATTATCTGATATACTGAAGGTCGTAGGCGATGTGTACTTGAAAAACTCACTACATACCCTAGATTATATATTATCCCTGAAAAGTTATTGTTCATATGATAAACTCCAACTTGTTATTAACTTAATTGGGTTAACTTGTCTTTCAAGTTTACCACAGTATCAAAGATGTATCATAGAAAGCAGAGGGTTAAAGACTGTTTTTCTTCTCGTGCAACGATGCTTAAGTAATGATATTCATGTAGAAAGGCCAGAGGTTGCTCTCATTTGCAAACTGTATTCCATAAAAGGTCTTGTTGCTGGATTGGTAAAGGAGACTGGGAAGGTTCCAATGTTGTCTTATTTTATGGTATGTGGGGCTTAG
Protein sequence

>Msa0329980

MIHSTVKAATAKEKEKDNDRSLSSHIITLHRRLLHSLNLGTRYFDEKTNRWKWQCVNIEVQKNESAADILGALLWILQCKNEPLLSMASNVAVKLVSILPSPLLQPCLLDLVYYLSSLLSSHQVEVAIPCATALNLVISNLSATIIEALKETEISICIVRNIKDRGAQKIEYFVEMASLLSTILLRWPSSRFPVCNDVELMKVLANMLTSTDSSIKLVLLKLYTSLALCDSVAQKLIEDGKVFLQMIVQAMGKSNPHDVRIEGFRLAQCLLRSQENCLKVMDLCGEALVDAIICGMRETGPCSKRIENNYGSVLVEACKFWKQGIDKVLLNLLIENIHDQSSEIVLPLEKQISMVKEGLKLNYHVALRSYVWDVLGFTFVDAIQKWCRIYQNDADDNFQGEPVSRAVLMMIYSPCNISSHARSVLSDILKVVGDVYLKNSLHTLDYILSLKSYCSYDKLQLVINLIGLTCLSSLPQYQRCIIESRGLKTVFLLVQRCLSNDIHVERPEVALICKLYSIKGLVAGLVKETGKVPMLSYFMVCGA*