Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332030 | XP_003595077.1 | 85.246 | 244 | 27 | 1 | 1 | 235 | 1 | 244 | 1.80e-146 | 418 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332030 | sp|Q2HIV9|BH035_ARATH | 61.574 | 216 | 78 | 4 | 17 | 232 | 30 | 240 | 1.15e-80 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0332030 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0244600 | Msa0332030 | 0.832870 | 7.385423e-56 | -8.615850e-47 |
| Msa0283600 | Msa0332030 | 0.897978 | 8.317854e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332030 | MtrunA17_Chr2g0298751 | 85.246 | 244 | 27 | 1 | 1 | 235 | 1 | 244 | 1.66e-150 | 418 |
| Msa0332030 | MtrunA17_Chr8g0365711 | 32.353 | 170 | 107 | 2 | 42 | 211 | 243 | 404 | 2.95e-23 | 97.1 |
| Msa0332030 | MtrunA17_Chr2g0320291 | 28.934 | 197 | 117 | 5 | 42 | 233 | 132 | 310 | 2.03e-19 | 85.1 |
| Msa0332030 | MtrunA17_Chr1g0211081 | 29.279 | 222 | 130 | 6 | 12 | 209 | 280 | 498 | 2.36e-19 | 86.3 |
| Msa0332030 | MtrunA17_Chr3g0131691 | 29.570 | 186 | 125 | 4 | 39 | 223 | 294 | 474 | 2.95e-16 | 77.4 |
| Msa0332030 | MtrunA17_Chr7g0252041 | 30.645 | 186 | 124 | 3 | 40 | 223 | 283 | 465 | 5.29e-16 | 76.6 |
| Msa0332030 | MtrunA17_Chr4g0028071 | 32.051 | 156 | 93 | 3 | 42 | 196 | 148 | 291 | 8.11e-16 | 75.5 |
| Msa0332030 | MtrunA17_Chr4g0049331 | 26.396 | 197 | 123 | 5 | 2 | 196 | 99 | 275 | 5.23e-14 | 70.1 |
| Msa0332030 | MtrunA17_Chr7g0275821 | 58.182 | 55 | 23 | 0 | 44 | 98 | 253 | 307 | 2.05e-13 | 68.9 |
| Msa0332030 | MtrunA17_Chr7g0260841 | 49.367 | 79 | 29 | 3 | 44 | 122 | 356 | 423 | 8.78e-13 | 67.0 |
| Msa0332030 | MtrunA17_Chr8g0366751 | 51.667 | 60 | 29 | 0 | 44 | 103 | 463 | 522 | 1.39e-12 | 66.6 |
| Msa0332030 | MtrunA17_Chr5g0411341 | 50.000 | 70 | 32 | 1 | 44 | 110 | 494 | 563 | 5.54e-12 | 64.7 |
| Msa0332030 | MtrunA17_Chr8g0346151 | 50.000 | 62 | 24 | 1 | 44 | 105 | 280 | 334 | 7.87e-12 | 64.3 |
| Msa0332030 | MtrunA17_Chr2g0333611 | 23.810 | 168 | 112 | 3 | 44 | 210 | 46 | 198 | 1.00e-11 | 62.4 |
| Msa0332030 | MtrunA17_Chr8g0346161 | 44.286 | 70 | 28 | 1 | 44 | 102 | 292 | 361 | 2.15e-11 | 62.8 |
| Msa0332030 | MtrunA17_Chr1g0185621 | 47.368 | 57 | 30 | 0 | 32 | 88 | 464 | 520 | 3.44e-11 | 62.4 |
| Msa0332030 | MtrunA17_Chr5g0400661 | 24.786 | 234 | 139 | 9 | 1 | 210 | 97 | 317 | 4.79e-11 | 61.6 |
| Msa0332030 | MtrunA17_Chr2g0280161 | 49.091 | 55 | 28 | 0 | 44 | 98 | 178 | 232 | 5.98e-11 | 61.2 |
| Msa0332030 | MtrunA17_Chr5g0411541 | 34.395 | 157 | 81 | 4 | 39 | 195 | 152 | 286 | 8.09e-11 | 60.8 |
| Msa0332030 | MtrunA17_Chr2g0333641 | 26.263 | 198 | 116 | 6 | 44 | 233 | 138 | 313 | 8.36e-11 | 60.8 |
| Msa0332030 | MtrunA17_Chr4g0048851 | 35.000 | 140 | 63 | 5 | 41 | 155 | 45 | 181 | 9.49e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332030 | AT5G57150.1 | 60.909 | 220 | 81 | 4 | 13 | 232 | 25 | 239 | 7.96e-82 | 245 |
| Msa0332030 | AT4G29930.1 | 49.200 | 250 | 104 | 3 | 1 | 229 | 1 | 248 | 1.84e-73 | 224 |
| Msa0332030 | AT5G57150.5 | 63.402 | 194 | 66 | 4 | 13 | 206 | 25 | 213 | 1.35e-72 | 221 |
| Msa0332030 | AT5G57150.3 | 64.211 | 190 | 63 | 4 | 17 | 206 | 30 | 214 | 2.37e-72 | 220 |
| Msa0332030 | AT5G57150.2 | 63.542 | 192 | 65 | 4 | 17 | 208 | 30 | 216 | 2.41e-72 | 220 |
| Msa0332030 | AT5G57150.4 | 64.211 | 190 | 63 | 4 | 17 | 206 | 30 | 214 | 2.49e-71 | 219 |
| Msa0332030 | AT4G29930.6 | 49.167 | 240 | 93 | 3 | 1 | 229 | 1 | 222 | 5.86e-71 | 216 |
| Msa0332030 | AT4G29930.2 | 48.750 | 240 | 91 | 3 | 1 | 229 | 1 | 219 | 2.98e-70 | 215 |
| Msa0332030 | AT4G29930.3 | 48.899 | 227 | 93 | 3 | 1 | 206 | 1 | 225 | 3.17e-64 | 201 |
| Msa0332030 | AT4G29930.7 | 48.899 | 227 | 93 | 3 | 1 | 206 | 1 | 225 | 3.17e-64 | 201 |
| Msa0332030 | AT4G29930.5 | 48.165 | 218 | 81 | 3 | 1 | 207 | 1 | 197 | 7.72e-61 | 191 |
| Msa0332030 | AT4G29930.4 | 46.821 | 173 | 73 | 2 | 1 | 154 | 1 | 173 | 6.34e-42 | 141 |
| Msa0332030 | AT2G28160.2 | 32.278 | 158 | 91 | 4 | 42 | 196 | 130 | 274 | 6.94e-18 | 81.3 |
| Msa0332030 | AT2G28160.1 | 32.278 | 158 | 91 | 4 | 42 | 196 | 130 | 274 | 9.20e-18 | 80.9 |
| Msa0332030 | AT1G12860.1 | 31.183 | 186 | 117 | 3 | 40 | 223 | 264 | 440 | 4.30e-16 | 77.0 |
| Msa0332030 | AT3G26744.1 | 29.348 | 184 | 127 | 1 | 40 | 223 | 304 | 484 | 9.15e-16 | 76.3 |
| Msa0332030 | AT3G26744.4 | 29.348 | 184 | 127 | 1 | 40 | 223 | 304 | 484 | 9.15e-16 | 76.3 |
| Msa0332030 | AT3G26744.2 | 29.348 | 184 | 127 | 1 | 40 | 223 | 304 | 484 | 9.15e-16 | 76.3 |
| Msa0332030 | AT1G01260.1 | 48.101 | 79 | 37 | 1 | 44 | 122 | 434 | 508 | 7.29e-15 | 73.6 |
| Msa0332030 | AT1G01260.2 | 48.101 | 79 | 37 | 1 | 44 | 122 | 434 | 508 | 7.29e-15 | 73.6 |
| Msa0332030 | AT1G01260.3 | 48.101 | 79 | 37 | 1 | 44 | 122 | 434 | 508 | 7.29e-15 | 73.6 |
| Msa0332030 | AT3G26744.6 | 31.646 | 158 | 105 | 1 | 40 | 197 | 304 | 458 | 8.60e-15 | 73.6 |
| Msa0332030 | AT2G16910.1 | 27.749 | 191 | 113 | 5 | 42 | 216 | 313 | 494 | 9.21e-15 | 73.6 |
| Msa0332030 | AT1G12860.2 | 32.500 | 160 | 97 | 3 | 40 | 197 | 264 | 414 | 7.82e-14 | 70.5 |
| Msa0332030 | AT2G46510.1 | 58.182 | 55 | 23 | 0 | 44 | 98 | 396 | 450 | 1.06e-13 | 70.5 |
| Msa0332030 | AT4G16430.1 | 47.368 | 76 | 39 | 1 | 44 | 118 | 321 | 396 | 3.04e-13 | 68.9 |
| Msa0332030 | AT4G37850.2 | 29.444 | 180 | 107 | 6 | 44 | 219 | 153 | 316 | 7.59e-13 | 67.0 |
| Msa0332030 | AT4G37850.1 | 29.444 | 180 | 107 | 6 | 44 | 219 | 153 | 316 | 7.59e-13 | 67.0 |
| Msa0332030 | AT5G46760.1 | 34.416 | 154 | 84 | 7 | 44 | 193 | 416 | 556 | 8.16e-13 | 67.8 |
| Msa0332030 | AT1G32640.1 | 55.000 | 60 | 25 | 1 | 44 | 103 | 453 | 510 | 1.08e-12 | 67.4 |
| Msa0332030 | AT1G63650.3 | 28.994 | 169 | 113 | 3 | 41 | 203 | 403 | 570 | 3.96e-12 | 65.9 |
| Msa0332030 | AT1G63650.1 | 28.994 | 169 | 113 | 3 | 41 | 203 | 403 | 570 | 3.96e-12 | 65.9 |
| Msa0332030 | AT1G63650.2 | 28.994 | 169 | 113 | 3 | 41 | 203 | 403 | 570 | 3.96e-12 | 65.9 |
| Msa0332030 | AT4G17880.1 | 50.000 | 60 | 30 | 0 | 44 | 103 | 417 | 476 | 1.17e-11 | 64.3 |
| Msa0332030 | AT5G46830.1 | 28.804 | 184 | 106 | 4 | 44 | 219 | 344 | 510 | 2.82e-11 | 63.2 |
Find 67 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATAATGGAACTTGAATT+TGG | 0.174122 | 2_4:+48322764 | Msa0332030:CDS |
| TTTAAGGTGGTTGGTCTATT+TGG | 0.180528 | 2_4:-48321902 | None:intergenic |
| CTGATTTGTTCTCTTCTTCT+TGG | 0.191764 | 2_4:-48322849 | None:intergenic |
| TGATGATTGAAAGAAATTTA+AGG | 0.231892 | 2_4:-48321918 | None:intergenic |
| TAACAAAACTCCTTAATAAT+TGG | 0.232755 | 2_4:-48328787 | None:intergenic |
| TAACAAAACTCCTTAATAAT+TGG | 0.237592 | 2_4:-48328752 | None:intergenic |
| TGGAAAAGTTCCAATTATTA+AGG | 0.250720 | 2_4:+48328777 | Msa0332030:three_prime_UTR |
| GGATAAAGCTTCAATTATTA+AGG | 0.255192 | 2_4:+48322688 | Msa0332030:CDS |
| ATAACATGTTAAGTCATAAA+TGG | 0.293164 | 2_4:-48328845 | None:intergenic |
| CCACTATAGTATATAAGTTT+AGG | 0.294381 | 2_4:+48328658 | Msa0332030:three_prime_UTR |
| TAGTTTGGATTAATATTATT+AGG | 0.309618 | 2_4:-48322791 | None:intergenic |
| GGATTGGATGAGGCTTTAAC+AGG | 0.339402 | 2_4:+48322154 | Msa0332030:CDS |
| ATGTTTACCTTGCTAATGTT+TGG | 0.350291 | 2_4:-48322301 | None:intergenic |
| TGTTTACCTTGCTAATGTTT+GGG | 0.357210 | 2_4:-48322300 | None:intergenic |
| GCACTTCATTAGATGCTCAT+AGG | 0.359003 | 2_4:-48328611 | None:intergenic |
| GCCTGAGAAAGAGGATATAT+TGG | 0.364460 | 2_4:-48324057 | None:intergenic |
| TTGTGGTTGCAGTTGGGGAT+TGG | 0.368783 | 2_4:+48322138 | Msa0332030:intron |
| TCTTGATCAAAATCATAGTT+TGG | 0.369624 | 2_4:-48322806 | None:intergenic |
| TTTACCTCAAGGACTTCAAT+TGG | 0.374167 | 2_4:-48322902 | None:intergenic |
| GGTTATTCAAGCTGAGATAA+TGG | 0.376023 | 2_4:+48322751 | Msa0332030:CDS |
| TAAGAGTTGCAATGGCTGTT+TGG | 0.389325 | 2_4:-48328574 | None:intergenic |
| CACTTCATTAGATGCTCATA+GGG | 0.407342 | 2_4:-48328610 | None:intergenic |
| TAGATGCTCATAGGGCTTAG+AGG | 0.411365 | 2_4:-48328602 | None:intergenic |
| TTGCAGTTGGGGATTGGATG+AGG | 0.422701 | 2_4:+48322144 | Msa0332030:intron |
| GTGCTGAGTACAACCCTTAC+CGG | 0.425637 | 2_4:+48322004 | Msa0332030:CDS |
| TGAAAGAAATTTAAGGTGGT+TGG | 0.431422 | 2_4:-48321911 | None:intergenic |
| GTTGTTAAAGTTGAAATTGA+AGG | 0.431964 | 2_4:-48321967 | None:intergenic |
| CCTAAACTTATATACTATAG+TGG | 0.434631 | 2_4:-48328658 | None:intergenic |
| AGTATATAAGTTTAGGATTG+AGG | 0.435254 | 2_4:+48328665 | Msa0332030:three_prime_UTR |
| ACATTGTCTCTGAGAGGAAC+AGG | 0.441534 | 2_4:+48322233 | Msa0332030:CDS |
| TACATGTTGGTCTCCCGGTA+AGG | 0.449399 | 2_4:-48322018 | None:intergenic |
| AGATAATGGAACTTGAATTT+GGG | 0.453081 | 2_4:+48322765 | Msa0332030:CDS |
| TGAGCATGACATGTAACAAA+AGG | 0.468788 | 2_4:+48323973 | Msa0332030:CDS |
| GCGGATGGTGCAGCATCATC+AGG | 0.473222 | 2_4:+48322196 | Msa0332030:CDS |
| GCCAATATATCCTCTTTCTC+AGG | 0.477840 | 2_4:+48324056 | Msa0332030:CDS |
| ACACATGGAAGAGAATATAA+TGG | 0.483631 | 2_4:+48323947 | Msa0332030:CDS |
| CGAAAGCCTGCCTGAGAAAG+AGG | 0.487286 | 2_4:-48324066 | None:intergenic |
| TTACCTACATGTTGGTCTCC+CGG | 0.526666 | 2_4:-48322023 | None:intergenic |
| AAGAGCTTCCTGTGTTGCTA+AGG | 0.527358 | 2_4:+48322825 | Msa0332030:CDS |
| ACATGTTGGTCTCCCGGTAA+GGG | 0.528733 | 2_4:-48322017 | None:intergenic |
| ATATATCCTCTTTCTCAGGC+AGG | 0.530610 | 2_4:+48324060 | Msa0332030:CDS |
| AATTTCAACTTTAACAACCA+TGG | 0.540733 | 2_4:+48321972 | Msa0332030:exon |
| TGATGATGCTGCACCATCCG+CGG | 0.544506 | 2_4:-48322194 | None:intergenic |
| GAGCATGACATGTAACAAAA+GGG | 0.547151 | 2_4:+48323974 | Msa0332030:CDS |
| CTTTCCAATTGAAGTCCTTG+AGG | 0.548914 | 2_4:+48322898 | Msa0332030:CDS |
| AGGGTCATTAAGAGTTGCAA+TGG | 0.565369 | 2_4:-48328582 | None:intergenic |
| TTCTTGGACCTTAGCAACAC+AGG | 0.566724 | 2_4:-48322833 | None:intergenic |
| CTCAGCACCAATGTTCTCCA+TGG | 0.577641 | 2_4:-48321989 | None:intergenic |
| AGATGCTCATAGGGCTTAGA+GGG | 0.580755 | 2_4:-48328601 | None:intergenic |
| TAATAATTGGAAAATTGAGT+AGG | 0.581054 | 2_4:-48328739 | None:intergenic |
| TGCTGAGTACAACCCTTACC+GGG | 0.581537 | 2_4:+48322005 | Msa0332030:CDS |
| TTCGAAGACAGTCTTCATTG+AGG | 0.583420 | 2_4:+48324085 | Msa0332030:CDS |
| GCAGCTTAGGGTTACACACA+TGG | 0.606797 | 2_4:+48323932 | Msa0332030:intron |
| TTAACAACCATGGAGAACAT+TGG | 0.610292 | 2_4:+48321982 | Msa0332030:exon |
| CTATGAAAATATGAAAGCCA+CGG | 0.614229 | 2_4:-48328690 | None:intergenic |
| TAACAAAAGGGCAGACACAA+TGG | 0.615640 | 2_4:+48323986 | Msa0332030:CDS |
| TATGATTCAAGCTCCGCGGA+TGG | 0.621734 | 2_4:+48322181 | Msa0332030:CDS |
| GATTGGATGAGGCTTTAACA+GGG | 0.623983 | 2_4:+48322155 | Msa0332030:CDS |
| GGACCACTGCTCTAAGTGCA+AGG | 0.633774 | 2_4:-48322279 | None:intergenic |
| AGTTTAGGATTGAGGAACCG+TGG | 0.637939 | 2_4:+48328673 | Msa0332030:three_prime_UTR |
| AGTCTTGCATGAGCAAGAGA+AGG | 0.639595 | 2_4:+48322730 | Msa0332030:CDS |
| CTAAGAACATTGTCTCTGAG+AGG | 0.650410 | 2_4:+48322227 | Msa0332030:CDS |
| ACTCCTTGCACTTAGAGCAG+TGG | 0.656584 | 2_4:+48322276 | Msa0332030:CDS |
| AGTGGTCCCAAACATTAGCA+AGG | 0.661525 | 2_4:+48322294 | Msa0332030:CDS |
| TGATTGAAAGAAATTTAAGG+TGG | 0.679867 | 2_4:-48321915 | None:intergenic |
| TTGTCTCTGAGAGGAACAGG+AGG | 0.687982 | 2_4:+48322236 | Msa0332030:CDS |
| GTATTATGATTCAAGCTCCG+CGG | 0.725456 | 2_4:+48322177 | Msa0332030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGTTAATTAAGATATA+TGG | + | chr2_4:48322115-48322134 | Msa0332030:intron | 10.0% |
| !! | TAGTGAAAATTATTAATTAA+TGG | - | chr2_4:48322343-48322362 | None:intergenic | 10.0% |
| !!! | TTGATTTTTTATTATTTGTT+TGG | + | chr2_4:48322389-48322408 | Msa0332030:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTAAGTTG+GGG | - | chr2_4:48323015-48323034 | None:intergenic | 10.0% |
| !!! | TTTTAAAAGTAATTATAAGA+TGG | - | chr2_4:48323321-48323340 | None:intergenic | 10.0% |
| !! | AATCAAATCAATATTTATAT+TGG | - | chr2_4:48323490-48323509 | None:intergenic | 10.0% |
| !!! | ATATATTAGCTTTATTTTTT+AGG | + | chr2_4:48323689-48323708 | Msa0332030:intron | 10.0% |
| !! | AACTAAAATTTAGATAAATT+TGG | + | chr2_4:48324877-48324896 | Msa0332030:intron | 10.0% |
| !! | ACTAAAATTTAGATAAATTT+GGG | + | chr2_4:48324878-48324897 | Msa0332030:intron | 10.0% |
| !!! | TTTTTTTTTTGTTTTTTGAA+TGG | + | chr2_4:48325388-48325407 | Msa0332030:intron | 10.0% |
| !! | AAACTTCTATAAAAAAAATT+TGG | - | chr2_4:48326272-48326291 | None:intergenic | 10.0% |
| !!! | AAATTTTTTTTATAGAAGTT+TGG | + | chr2_4:48326271-48326290 | Msa0332030:intron | 10.0% |
| !!! | AATTTTTTTTATAGAAGTTT+GGG | + | chr2_4:48326272-48326291 | Msa0332030:intron | 10.0% |
| !!! | TAAATTTAATATTTAAGGTT+AGG | - | chr2_4:48326596-48326615 | None:intergenic | 10.0% |
| !!! | ATAAATCTTTAATTTAATGT+TGG | - | chr2_4:48326713-48326732 | None:intergenic | 10.0% |
| !!! | TTGTTTTTTTAAATCAAAAA+TGG | + | chr2_4:48327023-48327042 | Msa0332030:intron | 10.0% |
| !!! | AATTTATGTAATATTTGTTT+TGG | - | chr2_4:48327733-48327752 | None:intergenic | 10.0% |
| !! | AAATTAACATTATTTAGTAT+AGG | + | chr2_4:48327758-48327777 | Msa0332030:intron | 10.0% |
| !!! | TATGTTTCATTTTAAATTAT+AGG | - | chr2_4:48327812-48327831 | None:intergenic | 10.0% |
| !!! | TTATTAAGTACTATTTTTTT+TGG | - | chr2_4:48327932-48327951 | None:intergenic | 10.0% |
| !!! | AGTTTTTTTTTTTTTTTTGA+GGG | - | chr2_4:48328047-48328066 | None:intergenic | 10.0% |
| !!! | ATCAATTTCTTTTTAATGAT+GGG | + | chr2_4:48322643-48322662 | Msa0332030:intron | 15.0% |
| !! | TAGTTTGGATTAATATTATT+AGG | - | chr2_4:48322794-48322813 | None:intergenic | 15.0% |
| !! | CTCTTAAAGTATAAAAATTA+GGG | - | chr2_4:48323202-48323221 | None:intergenic | 15.0% |
| !! | ACTCTTAAAGTATAAAAATT+AGG | - | chr2_4:48323203-48323222 | None:intergenic | 15.0% |
| !!! | AAAGATCTTTTGAAATTTAA+TGG | - | chr2_4:48323389-48323408 | None:intergenic | 15.0% |
| !! | AGATAAAAAAAATAGATAGT+GGG | + | chr2_4:48323577-48323596 | Msa0332030:intron | 15.0% |
| !!! | CTAATATATTTTCTCTATTA+GGG | - | chr2_4:48323678-48323697 | None:intergenic | 15.0% |
| !! | GTTGTTAAAAAAAAAAAAAG+TGG | - | chr2_4:48323737-48323756 | None:intergenic | 15.0% |
| !!! | TTTAATCTATATTTGTTGTT+GGG | - | chr2_4:48323765-48323784 | None:intergenic | 15.0% |
| !!! | TGTGTAATTAATTTGATATA+TGG | + | chr2_4:48323903-48323922 | Msa0332030:intron | 15.0% |
| !!! | TTGTTGTTTTATATTATTTG+AGG | - | chr2_4:48324205-48324224 | None:intergenic | 15.0% |
| !! | TAAATAGTTAAGGTTATAAT+AGG | - | chr2_4:48324579-48324598 | None:intergenic | 15.0% |
| !! | TTGTCCTTAATAAATAATAT+GGG | - | chr2_4:48324636-48324655 | None:intergenic | 15.0% |
| !! | ATTGTCCTTAATAAATAATA+TGG | - | chr2_4:48324637-48324656 | None:intergenic | 15.0% |
| !! | CTAAAATTTAGATAAATTTG+GGG | + | chr2_4:48324879-48324898 | Msa0332030:intron | 15.0% |
| !!! | TATCTGAATTTATCTATTTT+TGG | - | chr2_4:48325079-48325098 | None:intergenic | 15.0% |
| !! | AATTATGATGTATTATGTAA+GGG | - | chr2_4:48325883-48325902 | None:intergenic | 15.0% |
| !! | AAATTATGATGTATTATGTA+AGG | - | chr2_4:48325884-48325903 | None:intergenic | 15.0% |
| !! | TTGTCTAAAAAACATTTATT+TGG | - | chr2_4:48325972-48325991 | None:intergenic | 15.0% |
| !!! | TACGATATTTTATTTTGTTT+TGG | - | chr2_4:48326027-48326046 | None:intergenic | 15.0% |
| !!! | ATTCTATTTTAGTTGAAAAT+GGG | - | chr2_4:48326097-48326116 | None:intergenic | 15.0% |
| !!! | AATTCTATTTTAGTTGAAAA+TGG | - | chr2_4:48326098-48326117 | None:intergenic | 15.0% |
| !! | TATTTATTATCCAAGAAATT+GGG | - | chr2_4:48326141-48326160 | None:intergenic | 15.0% |
| !! | ATATTTATTATCCAAGAAAT+TGG | - | chr2_4:48326142-48326161 | None:intergenic | 15.0% |
| !! | AAATTTATTATCGAAGAAAT+TGG | - | chr2_4:48326227-48326246 | None:intergenic | 15.0% |
| !!! | ATAGAAATATTTGGATTTTT+GGG | - | chr2_4:48326327-48326346 | None:intergenic | 15.0% |
| !!! | TATAGAAATATTTGGATTTT+TGG | - | chr2_4:48326328-48326347 | None:intergenic | 15.0% |
| !! | AACATAAAAAATTAACTCAT+GGG | - | chr2_4:48326507-48326526 | None:intergenic | 15.0% |
| !! | AAACATAAAAAATTAACTCA+TGG | - | chr2_4:48326508-48326527 | None:intergenic | 15.0% |
| !!! | TATTTTCCTTTTAACAAAAT+AGG | + | chr2_4:48326673-48326692 | Msa0332030:intron | 15.0% |
| !!! | TTATTACCTATTTTGTTAAA+AGG | - | chr2_4:48326682-48326701 | None:intergenic | 15.0% |
| !! | AAAATCTCTATTAATTGATT+TGG | - | chr2_4:48326741-48326760 | None:intergenic | 15.0% |
| !! | AAAAACAATAAATATGAATG+TGG | - | chr2_4:48326872-48326891 | None:intergenic | 15.0% |
| !!! | AATTAATAAACACATTTTCA+GGG | - | chr2_4:48327656-48327675 | None:intergenic | 15.0% |
| !!! | GAGTTTTTTTTTTTTTTTTG+AGG | - | chr2_4:48328048-48328067 | None:intergenic | 15.0% |
| !!! | AACAATTATTTTTTCCAAAT+TGG | + | chr2_4:48328098-48328117 | Msa0332030:intron | 15.0% |
| !! | TGATATGTTATAATACTTAT+TGG | - | chr2_4:48328209-48328228 | None:intergenic | 15.0% |
| !! | ATAAGTATTATAACATATCA+TGG | + | chr2_4:48328209-48328228 | Msa0332030:intron | 15.0% |
| !! | TGATGATTGAAAGAAATTTA+AGG | - | chr2_4:48321921-48321940 | None:intergenic | 20.0% |
| !! | TTAATTAAGATATATGGTTG+TGG | + | chr2_4:48322121-48322140 | Msa0332030:intron | 20.0% |
| !!! | AATTTTCACTACTCAATTTT+TGG | + | chr2_4:48322352-48322371 | Msa0332030:intron | 20.0% |
| !!! | ATTTTCACTACTCAATTTTT+GGG | + | chr2_4:48322353-48322372 | Msa0332030:intron | 20.0% |
| !!! | TTTTTTAAACATGTTGTTAG+AGG | + | chr2_4:48322541-48322560 | Msa0332030:intron | 20.0% |
| !! | CAAATAATTATACCATATGA+TGG | - | chr2_4:48322605-48322624 | None:intergenic | 20.0% |
| !! | CATCATATGGTATAATTATT+TGG | + | chr2_4:48322603-48322622 | Msa0332030:intron | 20.0% |
| !! | TTAAAAAGAAATTGATGTCA+TGG | - | chr2_4:48322639-48322658 | None:intergenic | 20.0% |
| !!! | CATCAATTTCTTTTTAATGA+TGG | + | chr2_4:48322642-48322661 | Msa0332030:intron | 20.0% |
| !!! | TGAATCTAAGATTAAGTTTA+TGG | - | chr2_4:48323227-48323246 | None:intergenic | 20.0% |
| !! | TAATTATAAGATGGTCATTA+CGG | - | chr2_4:48323312-48323331 | None:intergenic | 20.0% |
| !! | GAGATAAAAAAAATAGATAG+TGG | + | chr2_4:48323576-48323595 | Msa0332030:intron | 20.0% |
| !! | TTATAAATTGGTTATAAGCA+TGG | - | chr2_4:48323612-48323631 | None:intergenic | 20.0% |
| !!! | GCTAATATATTTTCTCTATT+AGG | - | chr2_4:48323679-48323698 | None:intergenic | 20.0% |
| !!! | TTAATCTATATTTGTTGTTG+GGG | - | chr2_4:48323764-48323783 | None:intergenic | 20.0% |
| !!! | CTTTAATCTATATTTGTTGT+TGG | - | chr2_4:48323766-48323785 | None:intergenic | 20.0% |
| !! | TGATGCTAAAAAAATAAATG+TGG | + | chr2_4:48323822-48323841 | Msa0332030:intron | 20.0% |
| !! | GATGCTAAAAAAATAAATGT+GGG | + | chr2_4:48323823-48323842 | Msa0332030:intron | 20.0% |
| !! | ATGCTAAAAAAATAAATGTG+GGG | + | chr2_4:48323824-48323843 | Msa0332030:intron | 20.0% |
| !!! | TACCATTTAATTTGCTTTAT+AGG | + | chr2_4:48324150-48324169 | Msa0332030:intron | 20.0% |
| !! | TACCTATAAAGCAAATTAAA+TGG | - | chr2_4:48324155-48324174 | None:intergenic | 20.0% |
| !!! | TGTTTTATATTATTTGAGGA+AGG | - | chr2_4:48324201-48324220 | None:intergenic | 20.0% |
| !! | ACTTGTAATAGAAAATTGTT+TGG | - | chr2_4:48324281-48324300 | None:intergenic | 20.0% |
| !!! | CAAAAAGGTGTTTAAATATA+GGG | - | chr2_4:48324344-48324363 | None:intergenic | 20.0% |
| !!! | TCAAAAAGGTGTTTAAATAT+AGG | - | chr2_4:48324345-48324364 | None:intergenic | 20.0% |
| !!! | AGACAAATTTTCAATCAAAA+AGG | - | chr2_4:48324359-48324378 | None:intergenic | 20.0% |
| !! | GATAGAGTAATAAATAGTTA+AGG | - | chr2_4:48324589-48324608 | None:intergenic | 20.0% |
| !! | ATCTCCCATATTATTTATTA+AGG | + | chr2_4:48324629-48324648 | Msa0332030:intron | 20.0% |
| !!! | TTGTGTTACCTTATTTATTT+CGG | + | chr2_4:48325287-48325306 | Msa0332030:intron | 20.0% |
| !! | AAAAAAAAAAAAGAGGAAGA+AGG | - | chr2_4:48325371-48325390 | None:intergenic | 20.0% |
| !! | AAAAAAGTTTAAGTGAATAG+TGG | + | chr2_4:48325532-48325551 | Msa0332030:intron | 20.0% |
| !!! | AAATGTTTTTTAGACAACAT+CGG | + | chr2_4:48325975-48325994 | Msa0332030:intron | 20.0% |
| !!! | TTCTATTTTAGTTGAAAATG+GGG | - | chr2_4:48326096-48326115 | None:intergenic | 20.0% |
| !!! | GAAATTGGTGATATTTTTTT+GGG | - | chr2_4:48326212-48326231 | None:intergenic | 20.0% |
| !!! | AGAAATTGGTGATATTTTTT+TGG | - | chr2_4:48326213-48326232 | None:intergenic | 20.0% |
| !!! | TAGAAATATTTGGATTTTTG+GGG | - | chr2_4:48326326-48326345 | None:intergenic | 20.0% |
| !! | CTAACCTTAAAAAAATTTGT+GGG | + | chr2_4:48326355-48326374 | Msa0332030:intron | 20.0% |
| !! | ATGGAATATATAAACAATGA+CGG | + | chr2_4:48327042-48327061 | Msa0332030:intron | 20.0% |
| !! | TCAAGTAATTACAAAATCAA+AGG | + | chr2_4:48327123-48327142 | Msa0332030:intron | 20.0% |
| !! | AAGTTAAGTATCATTCTTAT+TGG | - | chr2_4:48327232-48327251 | None:intergenic | 20.0% |
| !! | AACAATATCTTATTCTTGTT+TGG | - | chr2_4:48327617-48327636 | None:intergenic | 20.0% |
| !!! | CAATTAATAAACACATTTTC+AGG | - | chr2_4:48327657-48327676 | None:intergenic | 20.0% |
| !!! | AAAATGAAACATATTGACTT+AGG | + | chr2_4:48327819-48327838 | Msa0332030:intron | 20.0% |
| !! | AAAAAAAAAAAACTCCATTG+TGG | + | chr2_4:48328053-48328072 | Msa0332030:intron | 20.0% |
| !! | TTTAACTAAAAAATATGGAC+TGG | - | chr2_4:48328150-48328169 | None:intergenic | 20.0% |
| !! | ATTATAACATATCATGGATA+TGG | + | chr2_4:48328215-48328234 | Msa0332030:intron | 20.0% |
| !!! | TATGAGGTACTTTTTTTTTA+GGG | - | chr2_4:48328279-48328298 | None:intergenic | 20.0% |
| !!! | TTATGAGGTACTTTTTTTTT+AGG | - | chr2_4:48328280-48328299 | None:intergenic | 20.0% |
| !! | TATTACAATGACAAATTATG+AGG | - | chr2_4:48328295-48328314 | None:intergenic | 20.0% |
| !!! | TTTTAATTCAAAATTAGGGA+AGG | + | chr2_4:48328403-48328422 | Msa0332030:intron | 20.0% |
| !! | TTTAATTCAAAATTAGGGAA+GGG | + | chr2_4:48328404-48328423 | Msa0332030:intron | 20.0% |
| !! | AAAAAAAAAAAAACAGAGAG+AGG | + | chr2_4:48328453-48328472 | Msa0332030:intron | 20.0% |
| !! | TAATAATTGGAAAATTGAGT+AGG | - | chr2_4:48328742-48328761 | None:intergenic | 20.0% |
| !!! | ACTCAATTTTCCAATTATTA+AGG | + | chr2_4:48328742-48328761 | Msa0332030:three_prime_UTR | 20.0% |
| !! | TAACAAAACTCCTTAATAAT+TGG | - | chr2_4:48328755-48328774 | None:intergenic | 20.0% |
| !! | TAACAAAACTCCTTAATAAT+TGG | - | chr2_4:48328755-48328774 | None:intergenic | 20.0% |
| !! | ATAACATGTTAAGTCATAAA+TGG | - | chr2_4:48328848-48328867 | None:intergenic | 20.0% |
| ! | TGATTGAAAGAAATTTAAGG+TGG | - | chr2_4:48321918-48321937 | None:intergenic | 25.0% |
| ! | GTTGTTAAAGTTGAAATTGA+AGG | - | chr2_4:48321970-48321989 | None:intergenic | 25.0% |
| ! | AATTTCAACTTTAACAACCA+TGG | + | chr2_4:48321972-48321991 | Msa0332030:exon | 25.0% |
| !! | GTAAACATCACAAATTTTAG+TGG | + | chr2_4:48322316-48322335 | Msa0332030:intron | 25.0% |
| ! | GGATAAAATATAAGTACGAA+AGG | + | chr2_4:48322410-48322429 | Msa0332030:intron | 25.0% |
| !!! | AATTTCTTTTTAATGATGGG+TGG | + | chr2_4:48322646-48322665 | Msa0332030:intron | 25.0% |
| ! | GGATAAAGCTTCAATTATTA+AGG | + | chr2_4:48322688-48322707 | Msa0332030:CDS | 25.0% |
| !!! | AGATAATGGAACTTGAATTT+GGG | + | chr2_4:48322765-48322784 | Msa0332030:CDS | 25.0% |
| ! | TCTTGATCAAAATCATAGTT+TGG | - | chr2_4:48322809-48322828 | None:intergenic | 25.0% |
| ! | CAAAAATAAGACATTGTATG+AGG | + | chr2_4:48323448-48323467 | Msa0332030:intron | 25.0% |
| !! | TATATTGGAAATTTTTGCAC+AGG | - | chr2_4:48323475-48323494 | None:intergenic | 25.0% |
| ! | TAAGGTGGTGATTTATAAAT+TGG | - | chr2_4:48323624-48323643 | None:intergenic | 25.0% |
| ! | TATAAATCACCACCTTAATA+AGG | + | chr2_4:48323627-48323646 | Msa0332030:intron | 25.0% |
| !!! | TAATCTATATTTGTTGTTGG+GGG | - | chr2_4:48323763-48323782 | None:intergenic | 25.0% |
| ! | AGATTAAAGAAGAAATTGCA+AGG | + | chr2_4:48323777-48323796 | Msa0332030:intron | 25.0% |
| !! | CTATCCTTTAATTTCATTTC+AGG | + | chr2_4:48324115-48324134 | Msa0332030:intron | 25.0% |
| !!! | TTAATTTGCTTTATAGGTAG+TGG | + | chr2_4:48324156-48324175 | Msa0332030:intron | 25.0% |
| ! | GGCTAAAATAGAAAAATGTT+TGG | - | chr2_4:48324260-48324279 | None:intergenic | 25.0% |
| !!! | ATGCTTTTAACTTTTTGTGT+TGG | - | chr2_4:48324313-48324332 | None:intergenic | 25.0% |
| ! | TTTGTTTGTATGTGTATTAG+AGG | - | chr2_4:48324446-48324465 | None:intergenic | 25.0% |
| ! | CATACAAACAAATGACAATT+TGG | + | chr2_4:48324454-48324473 | Msa0332030:intron | 25.0% |
| ! | TGTAAAGCGACATATAATTT+GGG | - | chr2_4:48324528-48324547 | None:intergenic | 25.0% |
| ! | TTGTAAAGCGACATATAATT+TGG | - | chr2_4:48324529-48324548 | None:intergenic | 25.0% |
| ! | AAGTAACATTAATGTTGCAT+TGG | - | chr2_4:48324554-48324573 | None:intergenic | 25.0% |
| ! | GAAATGCAATTAATATTGTG+TGG | - | chr2_4:48324689-48324708 | None:intergenic | 25.0% |
| !! | TATATCAAGGTGTATTCTTT+TGG | + | chr2_4:48324905-48324924 | Msa0332030:intron | 25.0% |
| ! | AAAACTAATGGAGTTCTATT+TGG | - | chr2_4:48324949-48324968 | None:intergenic | 25.0% |
| ! | CCAAAGTTTACAAAAACTAA+TGG | - | chr2_4:48324961-48324980 | None:intergenic | 25.0% |
| !!! | CCATTAGTTTTTGTAAACTT+TGG | + | chr2_4:48324958-48324977 | Msa0332030:intron | 25.0% |
| ! | ATTTCATAGAAGAAGAAGAT+AGG | + | chr2_4:48325004-48325023 | Msa0332030:intron | 25.0% |
| ! | TTTCATAGAAGAAGAAGATA+GGG | + | chr2_4:48325005-48325024 | Msa0332030:intron | 25.0% |
| ! | GGACATAAAAACCAATAATT+AGG | + | chr2_4:48325247-48325266 | Msa0332030:intron | 25.0% |
| !! | TTTTCTTCTTCATCTAATGA+TGG | + | chr2_4:48325414-48325433 | Msa0332030:intron | 25.0% |
| ! | TAACATTTCCCTATGAAAAA+AGG | + | chr2_4:48325856-48325875 | Msa0332030:intron | 25.0% |
| ! | AACATTTCCCTATGAAAAAA+GGG | + | chr2_4:48325857-48325876 | Msa0332030:intron | 25.0% |
| ! | TGAAAATTATCCCAATTTCT+TGG | + | chr2_4:48326128-48326147 | Msa0332030:intron | 25.0% |
| ! | TATTAGTGAAGCACATTATT+AGG | + | chr2_4:48326177-48326196 | Msa0332030:intron | 25.0% |
| !!! | AGAAATATTTGGATTTTTGG+GGG | - | chr2_4:48326325-48326344 | None:intergenic | 25.0% |
| !!! | CCACAAATTTTTTTAAGGTT+AGG | - | chr2_4:48326357-48326376 | None:intergenic | 25.0% |
| ! | CCTAACCTTAAAAAAATTTG+TGG | + | chr2_4:48326354-48326373 | Msa0332030:intron | 25.0% |
| ! | AGTAATGAAGAAAGAACTAA+TGG | + | chr2_4:48326549-48326568 | Msa0332030:intron | 25.0% |
| ! | TCTAATGTGTGCATAATTAT+TGG | + | chr2_4:48326626-48326645 | Msa0332030:intron | 25.0% |
| !! | TCTTTAATTTAATGTTGGTG+TGG | - | chr2_4:48326708-48326727 | None:intergenic | 25.0% |
| ! | AATATAAAACCATAACCTGA+TGG | + | chr2_4:48326776-48326795 | Msa0332030:intron | 25.0% |
| !!! | AGAAGAAAGCTTTTAGTTTT+TGG | - | chr2_4:48326835-48326854 | None:intergenic | 25.0% |
| !! | TGTCCAATTTTATATTTCTC+AGG | + | chr2_4:48326908-48326927 | Msa0332030:intron | 25.0% |
| ! | TTGAATGATTGTTTGTAACT+AGG | - | chr2_4:48327107-48327126 | None:intergenic | 25.0% |
| ! | TTAAGTATCATTCTTATTGG+TGG | - | chr2_4:48327229-48327248 | None:intergenic | 25.0% |
| !! | TTTATCTGAAAGCTTTGTAA+TGG | + | chr2_4:48327250-48327269 | Msa0332030:intron | 25.0% |
| !! | TTATCTGAAAGCTTTGTAAT+GGG | + | chr2_4:48327251-48327270 | Msa0332030:intron | 25.0% |
| !! | TTCAATAAGTTGACTTTAGT+CGG | + | chr2_4:48327570-48327589 | Msa0332030:intron | 25.0% |
| !!! | AATAATTGTTCTAGAGAGAA+GGG | - | chr2_4:48328088-48328107 | None:intergenic | 25.0% |
| !!! | AAATAATTGTTCTAGAGAGA+AGG | - | chr2_4:48328089-48328108 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGGGTACATAATG+AGG | - | chr2_4:48328267-48328286 | None:intergenic | 25.0% |
| ! | TTAATTCAAAATTAGGGAAG+GGG | + | chr2_4:48328405-48328424 | Msa0332030:intron | 25.0% |
| !!! | TTGCTTTTATCCTTTTTTTC+AGG | + | chr2_4:48328514-48328533 | Msa0332030:intron | 25.0% |
| ! | CCTAAACTTATATACTATAG+TGG | - | chr2_4:48328661-48328680 | None:intergenic | 25.0% |
| ! | CCACTATAGTATATAAGTTT+AGG | + | chr2_4:48328658-48328677 | Msa0332030:three_prime_UTR | 25.0% |
| !! | AGTATATAAGTTTAGGATTG+AGG | + | chr2_4:48328665-48328684 | Msa0332030:three_prime_UTR | 25.0% |
| !!! | TATTAAGGAGTTTTGTTATC+TGG | + | chr2_4:48328757-48328776 | Msa0332030:three_prime_UTR | 25.0% |
| ! | TGGAAAAGTTCCAATTATTA+AGG | + | chr2_4:48328777-48328796 | Msa0332030:three_prime_UTR | 25.0% |
| !!! | TATTAAGGAGTTTTGTTATC+TGG | + | chr2_4:48328757-48328776 | Msa0332030:three_prime_UTR | 25.0% |
| ! | TGAAAGAAATTTAAGGTGGT+TGG | - | chr2_4:48321914-48321933 | None:intergenic | 30.0% |
| TGATATTGTTACCTACATGT+TGG | - | chr2_4:48322034-48322053 | None:intergenic | 30.0% | |
| TCACTTTGATTCAAGTATGA+AGG | + | chr2_4:48322060-48322079 | Msa0332030:intron | 30.0% | |
| TGTTTACCTTGCTAATGTTT+GGG | - | chr2_4:48322303-48322322 | None:intergenic | 30.0% | |
| ATGTTTACCTTGCTAATGTT+TGG | - | chr2_4:48322304-48322323 | None:intergenic | 30.0% | |
| AGTACGAAAGGAAATGAATT+TGG | + | chr2_4:48322422-48322441 | Msa0332030:intron | 30.0% | |
| TTGATGTCTTTGACATCTAT+TGG | + | chr2_4:48322569-48322588 | Msa0332030:intron | 30.0% | |
| GGAAAATTTCAACCATCATA+TGG | + | chr2_4:48322590-48322609 | Msa0332030:intron | 30.0% | |
| ! | TAATTGAAGCTTTATCCATC+TGG | - | chr2_4:48322685-48322704 | None:intergenic | 30.0% |
| !! | GAGATAATGGAACTTGAATT+TGG | + | chr2_4:48322764-48322783 | Msa0332030:CDS | 30.0% |
| AAAGTGGATAAAGTCTGATT+TGG | - | chr2_4:48323721-48323740 | None:intergenic | 30.0% | |
| ACACATGGAAGAGAATATAA+TGG | + | chr2_4:48323947-48323966 | Msa0332030:CDS | 30.0% | |
| CACTCCTGAAATGAAATTAA+AGG | - | chr2_4:48324122-48324141 | None:intergenic | 30.0% | |
| ! | CTTTAATTTCATTTCAGGAG+TGG | + | chr2_4:48324120-48324139 | Msa0332030:intron | 30.0% |
| TGTTTGGCTAAAATATCGTT+TGG | - | chr2_4:48324244-48324263 | None:intergenic | 30.0% | |
| ! | AAGGTGTTTAAATATAGGGA+CGG | - | chr2_4:48324340-48324359 | None:intergenic | 30.0% |
| CTAGTAAGTAATACGAAAGA+GGG | - | chr2_4:48324393-48324412 | None:intergenic | 30.0% | |
| TCTAGTAAGTAATACGAAAG+AGG | - | chr2_4:48324394-48324413 | None:intergenic | 30.0% | |
| CCTAAAACGACATACAATTT+GGG | - | chr2_4:48324492-48324511 | None:intergenic | 30.0% | |
| !!! | CCAAATTGTATGTCGTTTTA+GGG | + | chr2_4:48324490-48324509 | Msa0332030:intron | 30.0% |
| CTCAAAACGTCATACAATTT+GGG | + | chr2_4:48324726-48324745 | Msa0332030:intron | 30.0% | |
| AAATTTGGGGAGATATATCA+AGG | + | chr2_4:48324892-48324911 | Msa0332030:intron | 30.0% | |
| TCTATGAAATATGCTTGAGA+AGG | - | chr2_4:48324994-48325013 | None:intergenic | 30.0% | |
| GTTACCTTGTATTCATTAGA+GGG | + | chr2_4:48325225-48325244 | Msa0332030:intron | 30.0% | |
| TTACCTTGTATTCATTAGAG+GGG | + | chr2_4:48325226-48325245 | Msa0332030:intron | 30.0% | |
| GAAACACGTTTCCTAATTAT+TGG | - | chr2_4:48325261-48325280 | None:intergenic | 30.0% | |
| TGCTAAAATTTCAGTCTACT+TGG | - | chr2_4:48326073-48326092 | None:intergenic | 30.0% | |
| AAGCACATTATTAGGAACAA+AGG | + | chr2_4:48326185-48326204 | Msa0332030:intron | 30.0% | |
| ! | TATAGCAAACTTCTCTGAAA+AGG | - | chr2_4:48326298-48326317 | None:intergenic | 30.0% |
| GGCGTGTATATAGAAATATT+TGG | - | chr2_4:48326336-48326355 | None:intergenic | 30.0% | |
| GCACCTGAGAAATATAAAAT+TGG | - | chr2_4:48326914-48326933 | None:intergenic | 30.0% | |
| GAATATATAAACAATGACGG+AGG | + | chr2_4:48327045-48327064 | Msa0332030:intron | 30.0% | |
| ! | TTTTAGTACACCTTATGCTA+AGG | - | chr2_4:48327076-48327095 | None:intergenic | 30.0% |
| !!! | AATAAAGCCACTTTTGTGTA+TGG | - | chr2_4:48327198-48327217 | None:intergenic | 30.0% |
| ! | TACTTTGTGTTTGGTTAGTT+TGG | - | chr2_4:48327316-48327335 | None:intergenic | 30.0% |
| TAATTATTTACGTGGTTCGA+AGG | - | chr2_4:48327369-48327388 | None:intergenic | 30.0% | |
| CAGTTCACTAATTATTTACG+TGG | - | chr2_4:48327377-48327396 | None:intergenic | 30.0% | |
| AACAAAATGAGATGCAGATT+CGG | + | chr2_4:48327494-48327513 | Msa0332030:intron | 30.0% | |
| AAAGTCAACTTATTGAACTG+CGG | - | chr2_4:48327567-48327586 | None:intergenic | 30.0% | |
| AAAAAAAACTCCATTGTGGA+TGG | + | chr2_4:48328057-48328076 | Msa0332030:intron | 30.0% | |
| ! | TTTTTCCAAATTGGTTACTG+CGG | + | chr2_4:48328107-48328126 | Msa0332030:intron | 30.0% |
| ! | AAAATATATCTAGCTTGACG+TGG | + | chr2_4:48328358-48328377 | Msa0332030:intron | 30.0% |
| TAATTCAAAATTAGGGAAGG+GGG | + | chr2_4:48328406-48328425 | Msa0332030:intron | 30.0% | |
| CTATGAAAATATGAAAGCCA+CGG | - | chr2_4:48328693-48328712 | None:intergenic | 30.0% | |
| TTAACAACCATGGAGAACAT+TGG | + | chr2_4:48321982-48322001 | Msa0332030:exon | 35.0% | |
| GGTTATTCAAGCTGAGATAA+TGG | + | chr2_4:48322751-48322770 | Msa0332030:CDS | 35.0% | |
| !! | CTGATTTGTTCTCTTCTTCT+TGG | - | chr2_4:48322852-48322871 | None:intergenic | 35.0% |
| TTTACCTCAAGGACTTCAAT+TGG | - | chr2_4:48322905-48322924 | None:intergenic | 35.0% | |
| TTGAAGTCCTTGAGGTAAAT+TGG | + | chr2_4:48322906-48322925 | Msa0332030:intron | 35.0% | |
| AATGGTAGACCTTATTAAGG+TGG | - | chr2_4:48323639-48323658 | None:intergenic | 35.0% | |
| GCATCAATAATACAAGAGAG+AGG | - | chr2_4:48323808-48323827 | None:intergenic | 35.0% | |
| AAAATAAATGTGGGGTGTGA+TGG | + | chr2_4:48323832-48323851 | Msa0332030:intron | 35.0% | |
| TGAGCATGACATGTAACAAA+AGG | + | chr2_4:48323973-48323992 | Msa0332030:CDS | 35.0% | |
| GAGCATGACATGTAACAAAA+GGG | + | chr2_4:48323974-48323993 | Msa0332030:CDS | 35.0% | |
| TTTGAGGAAGGAGAAAATGA+AGG | - | chr2_4:48324189-48324208 | None:intergenic | 35.0% | |
| AAACGACATACAATTTGGGA+CGG | - | chr2_4:48324488-48324507 | None:intergenic | 35.0% | |
| !!! | CCCAAATTGTATGTCGTTTT+AGG | + | chr2_4:48324489-48324508 | Msa0332030:intron | 35.0% |
| CCCTAAAACGACATACAATT+TGG | - | chr2_4:48324493-48324512 | None:intergenic | 35.0% | |
| GCTCAAAACGTCATACAATT+TGG | + | chr2_4:48324725-48324744 | Msa0332030:intron | 35.0% | |
| AAACGTCATACAATTTGGGA+CGG | + | chr2_4:48324730-48324749 | Msa0332030:intron | 35.0% | |
| ATGAGTGCTTACATACATGA+CGG | + | chr2_4:48324827-48324846 | Msa0332030:intron | 35.0% | |
| TGAATCAAAGTCGAAAAGAG+TGG | + | chr2_4:48325157-48325176 | Msa0332030:intron | 35.0% | |
| CTAATTCATGTATCACCAGT+GGG | - | chr2_4:48325204-48325223 | None:intergenic | 35.0% | |
| CACTGGTGATACATGAATTA+GGG | + | chr2_4:48325203-48325222 | Msa0332030:intron | 35.0% | |
| GGTTACCTTGTATTCATTAG+AGG | + | chr2_4:48325224-48325243 | Msa0332030:intron | 35.0% | |
| TGGTCATGCCGAAATAAATA+AGG | - | chr2_4:48325298-48325317 | None:intergenic | 35.0% | |
| TCTAATGATGGCAAAATGTC+AGG | + | chr2_4:48325426-48325445 | Msa0332030:intron | 35.0% | |
| !! | TGACAAGGATTTTGCCATTT+TGG | - | chr2_4:48325497-48325516 | None:intergenic | 35.0% |
| TTATATACGCAGCTATGACA+AGG | - | chr2_4:48325512-48325531 | None:intergenic | 35.0% | |
| GTTTAAGTGAATAGTGGTTC+AGG | + | chr2_4:48325538-48325557 | Msa0332030:intron | 35.0% | |
| TAGGGTTATGTCTGATTTCA+AGG | + | chr2_4:48325567-48325586 | Msa0332030:intron | 35.0% | |
| ! | AAGTCGTTCCTAGAGTTTTA+CGG | + | chr2_4:48325647-48325666 | Msa0332030:intron | 35.0% |
| !!! | GGGACCCACAAATTTTTTTA+AGG | - | chr2_4:48326362-48326381 | None:intergenic | 35.0% |
| !! | GCGTGTTTCTTTAAAATCCA+GGG | - | chr2_4:48326438-48326457 | None:intergenic | 35.0% |
| !! | AGCGTGTTTCTTTAAAATCC+AGG | - | chr2_4:48326439-48326458 | None:intergenic | 35.0% |
| ATGAAGAATCCATCAGGTTA+TGG | - | chr2_4:48326788-48326807 | None:intergenic | 35.0% | |
| TTTAGCATGAAGAATCCATC+AGG | - | chr2_4:48326794-48326813 | None:intergenic | 35.0% | |
| TGATTGTTTGTAACTAGGAG+TGG | - | chr2_4:48327102-48327121 | None:intergenic | 35.0% | |
| ! | TATTGTGGCTACTTTGTGTT+TGG | - | chr2_4:48327325-48327344 | None:intergenic | 35.0% |
| ! | GATCTTTTCTCCAACTATTG+TGG | - | chr2_4:48327340-48327359 | None:intergenic | 35.0% |
| ! | TTTCTTCACTGCGACATTTT+TGG | - | chr2_4:48327476-48327495 | None:intergenic | 35.0% |
| ! | CTCCTTTTTATTCCTTCTGA+TGG | + | chr2_4:48327969-48327988 | Msa0332030:intron | 35.0% |
| CTCCATCAGAAGGAATAAAA+AGG | - | chr2_4:48327974-48327993 | None:intergenic | 35.0% | |
| ! | CTTTTTATTCCTTCTGATGG+AGG | + | chr2_4:48327972-48327991 | Msa0332030:intron | 35.0% |
| AAATAGATACCTCCATCAGA+AGG | - | chr2_4:48327984-48328003 | None:intergenic | 35.0% | |
| !! | TTCTGATGGAGGTATCTATT+TGG | + | chr2_4:48327983-48328002 | Msa0332030:intron | 35.0% |
| ! | TATTTGGTTCAAGGATTCAG+AGG | + | chr2_4:48327999-48328018 | Msa0332030:intron | 35.0% |
| !!! | TTTTTTGAGGGAAACCACAA+TGG | - | chr2_4:48328035-48328054 | None:intergenic | 35.0% |
| ! | TTTTCCAAATTGGTTACTGC+GGG | + | chr2_4:48328108-48328127 | Msa0332030:intron | 35.0% |
| !!! | TCCTTTTTTTCAGGCAAATG+AGG | + | chr2_4:48328523-48328542 | Msa0332030:intron | 35.0% |
| TCCTCATTTGCCTGAAAAAA+AGG | - | chr2_4:48328527-48328546 | None:intergenic | 35.0% | |
| CACTTCATTAGATGCTCATA+GGG | - | chr2_4:48328613-48328632 | None:intergenic | 35.0% | |
| TATATGGTTGTGGTTGCAGT+TGG | + | chr2_4:48322131-48322150 | Msa0332030:intron | 40.0% | |
| ATATGGTTGTGGTTGCAGTT+GGG | + | chr2_4:48322132-48322151 | Msa0332030:intron | 40.0% | |
| ! | GATTGGATGAGGCTTTAACA+GGG | + | chr2_4:48322155-48322174 | Msa0332030:CDS | 40.0% |
| GTATTATGATTCAAGCTCCG+CGG | + | chr2_4:48322177-48322196 | Msa0332030:CDS | 40.0% | |
| CTAAGAACATTGTCTCTGAG+AGG | + | chr2_4:48322227-48322246 | Msa0332030:CDS | 40.0% | |
| ! | GGTGACTTTCTTTTTCCAGA+TGG | + | chr2_4:48322667-48322686 | Msa0332030:intron | 40.0% |
| CTTTCCAATTGAAGTCCTTG+AGG | + | chr2_4:48322898-48322917 | Msa0332030:CDS | 40.0% | |
| GAGATGATGATAGAGACAGT+GGG | - | chr2_4:48322932-48322951 | None:intergenic | 40.0% | |
| AGAGATGATGATAGAGACAG+TGG | - | chr2_4:48322933-48322952 | None:intergenic | 40.0% | |
| GGCAATGGTAGACCTTATTA+AGG | - | chr2_4:48323642-48323661 | None:intergenic | 40.0% | |
| ! | TTCTCTATTAGGGTACCTGA+TGG | - | chr2_4:48323668-48323687 | None:intergenic | 40.0% |
| !! | CTATATTTGTTGTTGGGGGT+TGG | - | chr2_4:48323759-48323778 | None:intergenic | 40.0% |
| TATATGGTTGAGTGCAGCTT+AGG | + | chr2_4:48323919-48323938 | Msa0332030:intron | 40.0% | |
| ATATGGTTGAGTGCAGCTTA+GGG | + | chr2_4:48323920-48323939 | Msa0332030:intron | 40.0% | |
| TAACAAAAGGGCAGACACAA+TGG | + | chr2_4:48323986-48324005 | Msa0332030:CDS | 40.0% | |
| GCCAATATATCCTCTTTCTC+AGG | + | chr2_4:48324056-48324075 | Msa0332030:CDS | 40.0% | |
| GCCTGAGAAAGAGGATATAT+TGG | - | chr2_4:48324060-48324079 | None:intergenic | 40.0% | |
| ATATATCCTCTTTCTCAGGC+AGG | + | chr2_4:48324060-48324079 | Msa0332030:CDS | 40.0% | |
| TTCGAAGACAGTCTTCATTG+AGG | + | chr2_4:48324085-48324104 | Msa0332030:CDS | 40.0% | |
| GAAGAAGATAGGGTGTACTA+TGG | + | chr2_4:48325015-48325034 | Msa0332030:intron | 40.0% | |
| TCAAAGTCGAAAAGAGTGGA+TGG | + | chr2_4:48325161-48325180 | Msa0332030:intron | 40.0% | |
| CCTAATTCATGTATCACCAG+TGG | - | chr2_4:48325205-48325224 | None:intergenic | 40.0% | |
| CCACTGGTGATACATGAATT+AGG | + | chr2_4:48325202-48325221 | Msa0332030:intron | 40.0% | |
| TGTCCCCTCTAATGAATACA+AGG | - | chr2_4:48325232-48325251 | None:intergenic | 40.0% | |
| CAAAATTACACCACGCGTTA+AGG | - | chr2_4:48325324-48325343 | None:intergenic | 40.0% | |
| !!! | GGATTTTGCCATTTTGGTGT+GGG | - | chr2_4:48325491-48325510 | None:intergenic | 40.0% |
| !!! | AGGATTTTGCCATTTTGGTG+TGG | - | chr2_4:48325492-48325511 | None:intergenic | 40.0% |
| ATAGTGGTTCAGGACTCATT+AGG | + | chr2_4:48325548-48325567 | Msa0332030:intron | 40.0% | |
| TAGTGGTTCAGGACTCATTA+GGG | + | chr2_4:48325549-48325568 | Msa0332030:intron | 40.0% | |
| TCAAGGCAGAACTAATGACA+AGG | + | chr2_4:48325584-48325603 | Msa0332030:intron | 40.0% | |
| ! | AGTCGTTCCTAGAGTTTTAC+GGG | + | chr2_4:48325648-48325667 | Msa0332030:intron | 40.0% |
| !! | AGAATGCTTAAAGAGTGTCC+CGG | - | chr2_4:48325716-48325735 | None:intergenic | 40.0% |
| AAATGTTAACGAGTGCCCAA+GGG | - | chr2_4:48325844-48325863 | None:intergenic | 40.0% | |
| !!! | GTAAGGGCCCTTTTTTCATA+GGG | - | chr2_4:48325867-48325886 | None:intergenic | 40.0% |
| !!! | TGTAAGGGCCCTTTTTTCAT+AGG | - | chr2_4:48325868-48325887 | None:intergenic | 40.0% |
| !! | GTTTCTTTAAAATCCAGGGC+CGG | - | chr2_4:48326434-48326453 | None:intergenic | 40.0% |
| TAGTACACCTTATGCTAAGG+AGG | - | chr2_4:48327073-48327092 | None:intergenic | 40.0% | |
| TGTATGGTTGTCAGAGATGA+TGG | - | chr2_4:48327182-48327201 | None:intergenic | 40.0% | |
| CTGACAACCATACACAAAAG+TGG | + | chr2_4:48327188-48327207 | Msa0332030:intron | 40.0% | |
| ! | TCATTCTTATTGGTGGCTGA+AGG | - | chr2_4:48327222-48327241 | None:intergenic | 40.0% |
| CACAAAGTAGCCACAATAGT+TGG | + | chr2_4:48327327-48327346 | Msa0332030:intron | 40.0% | |
| AAATGAGCACAAAGACTCTG+AGG | + | chr2_4:48327401-48327420 | Msa0332030:intron | 40.0% | |
| !!! | TGCGACATTTTTGGCTCTTT+AGG | - | chr2_4:48327467-48327486 | None:intergenic | 40.0% |
| !! | GGAGGTATCTATTTGGTTCA+AGG | + | chr2_4:48327990-48328009 | Msa0332030:intron | 40.0% |
| TAAGAGTTGCAATGGCTGTT+TGG | - | chr2_4:48328577-48328596 | None:intergenic | 40.0% | |
| AGGGTCATTAAGAGTTGCAA+TGG | - | chr2_4:48328585-48328604 | None:intergenic | 40.0% | |
| GCACTTCATTAGATGCTCAT+AGG | - | chr2_4:48328614-48328633 | None:intergenic | 40.0% | |
| ! | TTACCTACATGTTGGTCTCC+CGG | - | chr2_4:48322026-48322045 | None:intergenic | 45.0% |
| TATGGTTGTGGTTGCAGTTG+GGG | + | chr2_4:48322133-48322152 | Msa0332030:intron | 45.0% | |
| ! | GGATTGGATGAGGCTTTAAC+AGG | + | chr2_4:48322154-48322173 | Msa0332030:CDS | 45.0% |
| ! | ACATTGTCTCTGAGAGGAAC+AGG | + | chr2_4:48322233-48322252 | Msa0332030:CDS | 45.0% |
| AGTGGTCCCAAACATTAGCA+AGG | + | chr2_4:48322294-48322313 | Msa0332030:CDS | 45.0% | |
| AGTCTTGCATGAGCAAGAGA+AGG | + | chr2_4:48322730-48322749 | Msa0332030:CDS | 45.0% | |
| ! | AAGAGCTTCCTGTGTTGCTA+AGG | + | chr2_4:48322825-48322844 | Msa0332030:CDS | 45.0% |
| TTCTTGGACCTTAGCAACAC+AGG | - | chr2_4:48322836-48322855 | None:intergenic | 45.0% | |
| ATCACTGAGCTCACAACTCA+TGG | + | chr2_4:48323072-48323091 | Msa0332030:intron | 45.0% | |
| ! | TATTAGGGTACCTGATGGTG+TGG | - | chr2_4:48323663-48323682 | None:intergenic | 45.0% |
| ! | GACATACAATTTGGGACGGA+GGG | - | chr2_4:48324484-48324503 | None:intergenic | 45.0% |
| ! | GTCATACAATTTGGGACGGA+GGG | + | chr2_4:48324734-48324753 | Msa0332030:intron | 45.0% |
| ! | GAGTGGATGGTAGTTTGTGT+TGG | + | chr2_4:48325174-48325193 | Msa0332030:intron | 45.0% |
| !!! | GTTTGTGTTGGTTTTCCCAC+TGG | + | chr2_4:48325186-48325205 | Msa0332030:intron | 45.0% |
| TCACATCACCCACACCAAAA+TGG | + | chr2_4:48325480-48325499 | Msa0332030:intron | 45.0% | |
| CCTAATGCCCGTAAAACTCT+AGG | - | chr2_4:48325658-48325677 | None:intergenic | 45.0% | |
| ! | CCTAGAGTTTTACGGGCATT+AGG | + | chr2_4:48325655-48325674 | Msa0332030:intron | 45.0% |
| !! | AATGCTTAAAGAGTGTCCCG+GGG | - | chr2_4:48325714-48325733 | None:intergenic | 45.0% |
| !! | GAATGCTTAAAGAGTGTCCC+GGG | - | chr2_4:48325715-48325734 | None:intergenic | 45.0% |
| !! | AGTGTTTAAAGAGTGCCCCT+TGG | + | chr2_4:48325825-48325844 | Msa0332030:intron | 45.0% |
| !! | GTGTTTAAAGAGTGCCCCTT+GGG | + | chr2_4:48325826-48325845 | Msa0332030:intron | 45.0% |
| AATGTTAACGAGTGCCCAAG+GGG | - | chr2_4:48325843-48325862 | None:intergenic | 45.0% | |
| GAAATGTTAACGAGTGCCCA+AGG | - | chr2_4:48325845-48325864 | None:intergenic | 45.0% | |
| CCGTTGTTATGCATGGGTAT+CGG | - | chr2_4:48327153-48327172 | None:intergenic | 45.0% | |
| CCGATACCCATGCATAACAA+CGG | + | chr2_4:48327150-48327169 | Msa0332030:intron | 45.0% | |
| CGATACCCATGCATAACAAC+GGG | + | chr2_4:48327151-48327170 | Msa0332030:intron | 45.0% | |
| TCAGACCCGTTGTTATGCAT+GGG | - | chr2_4:48327159-48327178 | None:intergenic | 45.0% | |
| !! | AGGTCTTGGATTGGTGTTTC+AGG | - | chr2_4:48327434-48327453 | None:intergenic | 45.0% |
| TTTGGCGATTTCTCTGTGAC+AGG | - | chr2_4:48327599-48327618 | None:intergenic | 45.0% | |
| TTGATATGTCCCACTCTGAG+TGG | + | chr2_4:48327674-48327693 | Msa0332030:intron | 45.0% | |
| TAAGTGGTTCCACTCAGAGT+GGG | - | chr2_4:48327686-48327705 | None:intergenic | 45.0% | |
| TTAAGTGGTTCCACTCAGAG+TGG | - | chr2_4:48327687-48327706 | None:intergenic | 45.0% | |
| GAGGCTAAGTAACTCCATTG+TGG | + | chr2_4:48328018-48328037 | Msa0332030:intron | 45.0% | |
| AAGGGTAAGACCATCCACAA+TGG | - | chr2_4:48328070-48328089 | None:intergenic | 45.0% | |
| CATTCCCGCAGTAACCAATT+TGG | - | chr2_4:48328115-48328134 | None:intergenic | 45.0% | |
| AGATGCTCATAGGGCTTAGA+GGG | - | chr2_4:48328604-48328623 | None:intergenic | 45.0% | |
| TAGATGCTCATAGGGCTTAG+AGG | - | chr2_4:48328605-48328624 | None:intergenic | 45.0% | |
| ! | AGTTTAGGATTGAGGAACCG+TGG | + | chr2_4:48328673-48328692 | Msa0332030:three_prime_UTR | 45.0% |
| !!! | TTTTTTTTTTTTTTTAAGTT+GGG | - | chr2_4:48323016-48323035 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTAAGT+TGG | - | chr2_4:48323017-48323036 | None:intergenic | 5.0% |
| !! | TTAAAAAAAAAAAAAAAAAG+AGG | + | chr2_4:48323019-48323038 | Msa0332030:intron | 5.0% |
| !! | AAATTTAAATGAATTATATA+TGG | + | chr2_4:48325132-48325151 | Msa0332030:intron | 5.0% |
| !! | AAAAAAAAAAAAAAAAAAAG+AGG | - | chr2_4:48325378-48325397 | None:intergenic | 5.0% |
| !! | TCAATTAAATTTAATATTTA+AGG | - | chr2_4:48326601-48326620 | None:intergenic | 5.0% |
| !!! | TTTTTTTAATAATAATTAAG+TGG | - | chr2_4:48327702-48327721 | None:intergenic | 5.0% |
| !!! | TTTTATTTAACTAAAAAATA+TGG | - | chr2_4:48328155-48328174 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTAATTCAAAATT+AGG | + | chr2_4:48328398-48328417 | Msa0332030:intron | 5.0% |
| !!! | TTTTTTTTAATTCAAAATTA+GGG | + | chr2_4:48328399-48328418 | Msa0332030:intron | 5.0% |
| CTCAGCACCAATGTTCTCCA+TGG | - | chr2_4:48321992-48322011 | None:intergenic | 50.0% | |
| GTGCTGAGTACAACCCTTAC+CGG | + | chr2_4:48322004-48322023 | Msa0332030:CDS | 50.0% | |
| TGCTGAGTACAACCCTTACC+GGG | + | chr2_4:48322005-48322024 | Msa0332030:CDS | 50.0% | |
| ! | ACATGTTGGTCTCCCGGTAA+GGG | - | chr2_4:48322020-48322039 | None:intergenic | 50.0% |
| ! | TACATGTTGGTCTCCCGGTA+AGG | - | chr2_4:48322021-48322040 | None:intergenic | 50.0% |
| TTACCGGGAGACCAACATGT+AGG | + | chr2_4:48322020-48322039 | Msa0332030:intron | 50.0% | |
| TTGTGGTTGCAGTTGGGGAT+TGG | + | chr2_4:48322138-48322157 | Msa0332030:intron | 50.0% | |
| TTGCAGTTGGGGATTGGATG+AGG | + | chr2_4:48322144-48322163 | Msa0332030:intron | 50.0% | |
| TATGATTCAAGCTCCGCGGA+TGG | + | chr2_4:48322181-48322200 | Msa0332030:CDS | 50.0% | |
| ! | TTGTCTCTGAGAGGAACAGG+AGG | + | chr2_4:48322236-48322255 | Msa0332030:CDS | 50.0% |
| ACTCCTTGCACTTAGAGCAG+TGG | + | chr2_4:48322276-48322295 | Msa0332030:CDS | 50.0% | |
| CAGTGGGCCAATTTACCTCA+AGG | - | chr2_4:48322916-48322935 | None:intergenic | 50.0% | |
| TCTACCATTGCCACACCATC+AGG | + | chr2_4:48323650-48323669 | Msa0332030:intron | 50.0% | |
| GCAGCTTAGGGTTACACACA+TGG | + | chr2_4:48323932-48323951 | Msa0332030:intron | 50.0% | |
| ! | CGACATACAATTTGGGACGG+AGG | - | chr2_4:48324485-48324504 | None:intergenic | 50.0% |
| ! | CGTCATACAATTTGGGACGG+AGG | + | chr2_4:48324733-48324752 | Msa0332030:intron | 50.0% |
| ATGACCAAGACCTTAACGCG+TGG | + | chr2_4:48325311-48325330 | Msa0332030:intron | 50.0% | |
| TACACCACGCGTTAAGGTCT+TGG | - | chr2_4:48325318-48325337 | None:intergenic | 50.0% | |
| TGGGTGATGTGAGAAAGGAG+TGG | - | chr2_4:48325472-48325491 | None:intergenic | 50.0% | |
| TGGTGTGGGTGATGTGAGAA+AGG | - | chr2_4:48325477-48325496 | None:intergenic | 50.0% | |
| ! | GTCTTGTTAACGAGTGTCCC+CGG | + | chr2_4:48325694-48325713 | Msa0332030:intron | 50.0% |
| TCTTGTTAACGAGTGTCCCC+GGG | + | chr2_4:48325695-48325714 | Msa0332030:intron | 50.0% | |
| GGAGGAACCTCCTTAGCATA+AGG | + | chr2_4:48327063-48327082 | Msa0332030:intron | 50.0% | |
| GTCAGACCCGTTGTTATGCA+TGG | - | chr2_4:48327160-48327179 | None:intergenic | 50.0% | |
| CAGCATGTCAGGTCTTGGAT+TGG | - | chr2_4:48327443-48327462 | None:intergenic | 50.0% | |
| TAGGACAGCATGTCAGGTCT+TGG | - | chr2_4:48327448-48327467 | None:intergenic | 50.0% | |
| !! | GCTCTTTAGGACAGCATGTC+AGG | - | chr2_4:48327454-48327473 | None:intergenic | 50.0% |
| ! | TGATGATGCTGCACCATCCG+CGG | - | chr2_4:48322197-48322216 | None:intergenic | 55.0% |
| ! | GGACCACTGCTCTAAGTGCA+AGG | - | chr2_4:48322282-48322301 | None:intergenic | 55.0% |
| ! | GGTACCTGATGGTGTGGCAA+TGG | - | chr2_4:48323657-48323676 | None:intergenic | 55.0% |
| CGAAAGCCTGCCTGAGAAAG+AGG | - | chr2_4:48324069-48324088 | None:intergenic | 55.0% | |
| TTGTGGGTCCCTTACCGACA+AGG | + | chr2_4:48326371-48326390 | Msa0332030:intron | 55.0% | |
| TGTGGGTCCCTTACCGACAA+GGG | + | chr2_4:48326372-48326391 | Msa0332030:intron | 55.0% | |
| GCGGATGGTGCAGCATCATC+AGG | + | chr2_4:48322196-48322215 | Msa0332030:CDS | 60.0% | |
| CCTAGGGCCCTTGTCGGTAA+GGG | - | chr2_4:48326382-48326401 | None:intergenic | 60.0% | |
| AAAATCCAGGGCCGGCCCTA+GGG | - | chr2_4:48326426-48326445 | None:intergenic | 60.0% | |
| TAAAATCCAGGGCCGGCCCT+AGG | - | chr2_4:48326427-48326446 | None:intergenic | 60.0% | |
| ! | GCTTGTGTATGGCGGGGTGT+GGG | - | chr2_4:48327524-48327543 | None:intergenic | 60.0% |
| !! | AGGCTGGCTTGTGTATGGCG+GGG | - | chr2_4:48327530-48327549 | None:intergenic | 60.0% |
| !! | GAGGCTGGCTTGTGTATGGC+GGG | - | chr2_4:48327531-48327550 | None:intergenic | 60.0% |
| !! | CGAGGCTGGCTTGTGTATGG+CGG | - | chr2_4:48327532-48327551 | None:intergenic | 60.0% |
| CGCCATACACAAGCCAGCCT+CGG | + | chr2_4:48327530-48327549 | Msa0332030:intron | 60.0% | |
| !! | AGCCGAGGCTGGCTTGTGTA+TGG | - | chr2_4:48327535-48327554 | None:intergenic | 60.0% |
| GGCATCATTTCAGCCGAGGC+TGG | - | chr2_4:48327546-48327565 | None:intergenic | 60.0% | |
| CTGCGGCATCATTTCAGCCG+AGG | - | chr2_4:48327550-48327569 | None:intergenic | 60.0% | |
| CCCTTACCGACAAGGGCCCT+AGG | + | chr2_4:48326379-48326398 | Msa0332030:intron | 65.0% | |
| GCCTAGGGCCCTTGTCGGTA+AGG | - | chr2_4:48326383-48326402 | None:intergenic | 65.0% | |
| CACTCGCGGCCTATGCCCTA+GGG | + | chr2_4:48326408-48326427 | Msa0332030:intron | 65.0% | |
| ! | GTGTATGGCGGGGTGTGGGT+AGG | - | chr2_4:48327520-48327539 | None:intergenic | 65.0% |
| ! | GGCTTGTGTATGGCGGGGTG+TGG | - | chr2_4:48327525-48327544 | None:intergenic | 65.0% |
| CCACGGCCTAGGGCCCTTGT+CGG | - | chr2_4:48326388-48326407 | None:intergenic | 70.0% | |
| GGCATAGGCCGCGAGTGCCA+CGG | - | chr2_4:48326405-48326424 | None:intergenic | 70.0% | |
| GCACTCGCGGCCTATGCCCT+AGG | + | chr2_4:48326407-48326426 | Msa0332030:intron | 70.0% | |
| CCGACAAGGGCCCTAGGCCG+TGG | + | chr2_4:48326385-48326404 | Msa0332030:intron | 75.0% | |
| GCCCTAGGCCGTGGCACTCG+CGG | + | chr2_4:48326394-48326413 | Msa0332030:intron | 75.0% | |
| GCCGCGAGTGCCACGGCCTA+GGG | - | chr2_4:48326398-48326417 | None:intergenic | 75.0% | |
| CGCGGCCTATGCCCTAGGGC+CGG | + | chr2_4:48326412-48326431 | Msa0332030:intron | 75.0% | |
| CAGGGCCGGCCCTAGGGCAT+AGG | - | chr2_4:48326420-48326439 | None:intergenic | 75.0% | |
| CTATGCCCTAGGGCCGGCCC+TGG | + | chr2_4:48326418-48326437 | Msa0332030:intron | 75.0% | |
| ! | GGCCGCGAGTGCCACGGCCT+AGG | - | chr2_4:48326399-48326418 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 48321905 | 48328872 | 48321905 | ID=Msa0332030;Name=Msa0332030 |
| chr2_4 | mRNA | 48321905 | 48328872 | 48321905 | ID=Msa0332030-mRNA-1;Parent=Msa0332030;Name=Msa0332030-mRNA-1;_AED=0.02;_eAED=0.02;_QI=86|1|1|1|0.5|0.8|5|247|235 |
| chr2_4 | exon | 48321905 | 48322037 | 48321905 | ID=Msa0332030-mRNA-1:exon:14556;Parent=Msa0332030-mRNA-1 |
| chr2_4 | exon | 48322150 | 48322315 | 48322150 | ID=Msa0332030-mRNA-1:exon:14557;Parent=Msa0332030-mRNA-1 |
| chr2_4 | exon | 48322686 | 48322919 | 48322686 | ID=Msa0332030-mRNA-1:exon:14558;Parent=Msa0332030-mRNA-1 |
| chr2_4 | exon | 48323936 | 48324106 | 48323936 | ID=Msa0332030-mRNA-1:exon:14559;Parent=Msa0332030-mRNA-1 |
| chr2_4 | exon | 48328536 | 48328872 | 48328536 | ID=Msa0332030-mRNA-1:exon:14560;Parent=Msa0332030-mRNA-1 |
| chr2_4 | five_prime_UTR | 48321905 | 48321990 | 48321905 | ID=Msa0332030-mRNA-1:five_prime_utr;Parent=Msa0332030-mRNA-1 |
| chr2_4 | CDS | 48321991 | 48322037 | 48321991 | ID=Msa0332030-mRNA-1:cds;Parent=Msa0332030-mRNA-1 |
| chr2_4 | CDS | 48322150 | 48322315 | 48322150 | ID=Msa0332030-mRNA-1:cds;Parent=Msa0332030-mRNA-1 |
| chr2_4 | CDS | 48322686 | 48322919 | 48322686 | ID=Msa0332030-mRNA-1:cds;Parent=Msa0332030-mRNA-1 |
| chr2_4 | CDS | 48323936 | 48324106 | 48323936 | ID=Msa0332030-mRNA-1:cds;Parent=Msa0332030-mRNA-1 |
| chr2_4 | CDS | 48328536 | 48328625 | 48328536 | ID=Msa0332030-mRNA-1:cds;Parent=Msa0332030-mRNA-1 |
| chr2_4 | three_prime_UTR | 48328626 | 48328872 | 48328626 | ID=Msa0332030-mRNA-1:three_prime_utr;Parent=Msa0332030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
