AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0334620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0334620 MtrunA17_Chr2g0318811 89.549 421 44 0 1 421 1 421 0.0 788
Msa0334620 MtrunA17_Chr2g0318841 78.972 428 86 1 1 424 1 428 0.0 704
Msa0334620 MtrunA17_Chr2g0318831 75.534 421 103 0 1 421 4 424 0.0 659
Msa0334620 MtrunA17_Chr3g0084651 51.773 423 199 2 6 423 9 431 6.13e-166 478
Msa0334620 MtrunA17_Chr3g0084621 51.357 442 207 4 6 442 10 448 5.63e-163 476
Msa0334620 MtrunA17_Chr3g0084451 52.459 427 197 3 17 440 20 443 2.23e-161 479
Msa0334620 MtrunA17_Chr3g0084681 53.081 422 193 2 6 422 9 430 7.76e-161 476
Msa0334620 MtrunA17_Chr3g0084691 51.306 421 202 1 6 423 9 429 5.79e-159 473
Msa0334620 MtrunA17_Chr3g0098791 50.913 438 206 3 6 440 14 445 1.31e-158 464
Msa0334620 MtrunA17_Chr3g0084441 51.522 427 200 3 19 440 25 449 1.70e-154 461
Msa0334620 MtrunA17_Chr3g0084491 50.228 438 213 3 6 440 23 458 6.32e-154 460
Msa0334620 MtrunA17_Chr3g0084411 49.199 437 217 3 6 440 9 442 6.91e-153 457
Msa0334620 MtrunA17_Chr3g0084431 50.708 424 191 5 6 421 10 423 5.78e-145 436
Msa0334620 MtrunA17_Chr3g0084421 49.492 394 195 2 49 440 14 405 1.84e-142 429
Msa0334620 MtrunA17_Chr8g0361311 46.714 426 219 4 2 421 3 426 7.22e-134 396
Msa0334620 MtrunA17_Chr8g0361301 47.406 424 216 4 3 421 5 426 2.79e-131 401
Msa0334620 MtrunA17_Chr8g0361251 46.479 426 220 4 2 421 3 426 2.36e-129 396
Msa0334620 MtrunA17_Chr8g0361261 46.226 424 221 4 3 421 36 457 6.34e-128 394
Msa0334620 MtrunA17_Chr2g0280681 40.690 435 254 3 4 435 8 441 1.68e-110 348
Msa0334620 MtrunA17_Chr2g0280691 40.521 422 246 4 3 421 6 425 4.02e-104 331
Msa0334620 MtrunA17_Chr4g0042421 39.906 426 238 6 13 421 5 429 1.21e-103 325
Msa0334620 MtrunA17_Chr4g0048631 40.275 437 246 8 1 424 1 435 2.33e-103 329
Msa0334620 MtrunA17_Chr2g0280701 41.007 417 235 6 24 431 24 438 1.70e-100 321
Msa0334620 MtrunA17_Chr4g0042401 39.141 419 246 5 11 421 12 429 2.73e-100 321
Msa0334620 MtrunA17_Chr4g0042391 38.955 421 253 4 3 422 5 422 6.31e-100 318
Msa0334620 MtrunA17_Chr8g0361441 37.931 435 263 5 3 431 7 440 3.09e-99 318
Msa0334620 MtrunA17_Chr4g0042441 40.602 399 229 4 30 421 31 428 5.07e-99 317
Msa0334620 MtrunA17_Chr5g0428111 40.144 416 241 5 24 432 31 445 2.01e-98 316
Msa0334620 MtrunA17_Chr4g0042351 38.480 421 255 4 3 422 5 422 3.37e-98 314
Msa0334620 MtrunA17_Chr4g0042381 39.948 388 230 3 36 422 37 422 1.63e-96 310
Msa0334620 MtrunA17_Chr5g0428101 42.000 400 223 7 24 416 30 427 9.90e-96 308
Msa0334620 MtrunA17_Chr2g0280711 36.887 469 270 10 26 475 30 491 2.43e-95 308
Msa0334620 MtrunA17_Chr4g0042361 36.779 416 243 6 17 417 53 463 1.84e-91 298
Msa0334620 MtrunA17_Chr3g0093161 38.480 421 251 6 6 422 7 423 7.38e-91 295
Msa0334620 MtrunA17_Chr8g0361281 38.278 418 247 6 12 420 13 428 2.14e-90 295
Msa0334620 MtrunA17_Chr3g0078551 37.529 429 253 6 6 419 10 438 5.85e-89 291
Msa0334620 MtrunA17_Chr4g0042341 35.335 433 255 8 4 417 5 431 4.83e-86 283
Msa0334620 MtrunA17_Chr3g0078531 37.500 432 253 8 6 421 20 450 5.61e-86 283
Msa0334620 MtrunA17_Chr4g0048691 36.496 411 248 7 24 422 47 456 6.29e-86 274
Msa0334620 MtrunA17_Chr4g0048721 36.652 442 259 10 1 422 1 441 7.40e-86 274
Msa0334620 MtrunA17_Chr5g0422921 37.055 421 257 5 6 419 2 421 7.53e-86 282
Msa0334620 MtrunA17_Chr4g0023071 34.318 440 264 8 1 421 1 434 8.91e-86 282
Msa0334620 MtrunA17_Chr3g0078541 38.702 416 238 8 22 421 36 450 1.60e-85 282
Msa0334620 MtrunA17_Chr3g0078521 36.744 430 256 7 6 419 8 437 2.48e-85 281
Msa0334620 MtrunA17_Chr4g0048761 35.214 443 273 8 7 438 27 466 1.30e-83 272
Msa0334620 MtrunA17_Chr8g0361431 36.170 423 238 7 6 421 16 413 6.58e-83 274
Msa0334620 MtrunA17_Chr2g0323301 35.211 426 254 8 11 421 14 432 3.37e-82 273
Msa0334620 MtrunA17_Chr4g0048801 38.005 421 246 9 16 423 14 432 4.66e-82 273
Msa0334620 MtrunA17_Chr4g0048741 36.279 430 259 9 4 422 25 450 1.30e-79 266
Msa0334620 MtrunA17_Chr7g0236651 33.790 438 264 9 3 426 4 429 7.71e-76 255
Msa0334620 MtrunA17_Chr4g0048791 36.320 413 248 8 21 422 41 449 2.14e-75 254
Msa0334620 MtrunA17_Chr4g0048651 34.396 439 270 10 16 438 35 471 9.87e-74 242
Msa0334620 MtrunA17_Chr2g0280841 34.442 421 241 11 22 421 30 436 1.05e-72 238
Msa0334620 MtrunA17_Chr4g0048581 33.890 419 257 9 16 422 24 434 1.82e-72 247
Msa0334620 MtrunA17_Chr7g0236161 33.641 434 264 9 4 422 10 434 3.34e-72 244
Msa0334620 MtrunA17_Chr4g0048641 34.586 399 224 6 32 422 57 426 6.17e-72 244
Msa0334620 MtrunA17_Chr7g0236201 33.641 434 264 9 4 422 10 434 6.58e-72 244
Msa0334620 MtrunA17_Chr6g0453571 44.086 279 146 5 155 430 3 274 7.56e-72 235
Msa0334620 MtrunA17_Chr7g0236341 35.062 405 247 7 23 421 27 421 4.83e-71 243
Msa0334620 MtrunA17_Chr7g0236121 33.487 433 264 9 4 421 10 433 5.09e-71 242
Msa0334620 MtrunA17_Chr7g0236691 32.388 423 264 8 11 421 14 426 4.06e-70 240
Msa0334620 MtrunA17_Chr7g0236511 33.333 432 259 9 3 421 17 432 1.72e-68 235
Msa0334620 MtrunA17_Chr2g0280791 32.658 444 255 13 7 424 8 433 2.09e-68 236
Msa0334620 MtrunA17_Chr7g0236641 31.453 461 278 10 22 455 26 475 2.82e-67 233
Msa0334620 MtrunA17_Chr7g0236561 32.603 411 256 7 25 424 9 409 1.39e-66 230
Msa0334620 MtrunA17_Chr2g0280801 33.647 425 246 10 22 424 29 439 8.64e-66 228
Msa0334620 MtrunA17_Chr7g0236521 33.086 405 238 8 36 423 20 408 6.10e-65 217
Msa0334620 MtrunA17_Chr8g0340061 33.023 430 257 12 6 421 15 427 2.47e-64 218
Msa0334620 MtrunA17_Chr7g0236231 33.718 433 243 13 7 422 29 434 2.79e-64 224
Msa0334620 MtrunA17_Chr7g0236551 31.702 429 269 9 3 423 11 423 1.77e-63 221
Msa0334620 MtrunA17_Chr4g0055021 32.911 395 243 8 23 405 27 411 6.85e-63 211
Msa0334620 MtrunA17_Chr8g0340071 30.769 455 271 11 11 447 12 440 2.89e-60 213
Msa0334620 MtrunA17_Chr8g0340081 31.081 444 278 12 7 435 13 443 4.01e-60 213
Msa0334620 MtrunA17_Chr2g0280781 33.105 438 257 12 7 421 4 428 6.23e-59 209
Msa0334620 MtrunA17_Chr2g0280771 33.019 424 251 10 19 421 18 429 1.35e-58 206
Msa0334620 MtrunA17_Chr2g0280731 32.071 449 251 16 1 421 3 425 1.86e-58 208
Msa0334620 MtrunA17_Chr4g0020081 32.927 410 232 12 33 422 36 422 4.10e-58 207
Msa0334620 MtrunA17_Chr4g0023221 34.606 419 226 16 36 421 60 463 2.15e-54 198
Msa0334620 MtrunA17_Chr8g0340111 31.477 413 256 10 21 418 28 428 8.74e-54 194
Msa0334620 MtrunA17_Chr2g0280751 31.796 412 234 15 33 422 45 431 2.68e-53 193
Msa0334620 MtrunA17_Chr8g0340091 30.283 459 263 13 7 448 64 482 3.23e-53 193
Msa0334620 MtrunA17_Chr2g0323341 34.551 301 173 6 144 430 62 352 1.12e-47 176
Msa0334620 MtrunA17_Chr8g0348661 31.971 416 248 18 18 416 11 408 1.78e-45 171
Msa0334620 MtrunA17_Chr2g0323241 28.829 444 262 17 7 422 9 426 7.16e-44 161
Msa0334620 MtrunA17_Chr8g0361151 31.514 403 235 18 8 395 15 391 7.64e-40 150
Msa0334620 MtrunA17_Chr8g0361141 29.783 460 253 20 24 464 31 439 1.17e-36 145
Msa0334620 MtrunA17_Chr6g0453581 44.785 163 81 5 5 158 2 164 2.42e-36 133
Msa0334620 MtrunA17_Chr7g0236471 31.206 282 167 7 156 421 1 271 1.21e-35 141
Msa0334620 MtrunA17_Chr7g0236571 30.605 281 173 7 155 422 8 279 9.38e-34 135
Msa0334620 MtrunA17_Chr4g0048681 32.727 220 117 4 206 422 9 200 2.91e-31 127
Msa0334620 MtrunA17_Chr3g0106151 25.412 425 276 13 4 416 11 406 1.05e-30 127
Msa0334620 MtrunA17_Chr3g0134291 30.769 377 221 17 26 379 25 384 5.71e-30 124
Msa0334620 MtrunA17_Chr0c04g0492031 30.504 377 222 17 26 379 25 384 1.13e-29 124
Msa0334620 MtrunA17_Chr0c04g0492001 30.504 377 222 17 26 379 25 384 1.94e-29 123
Msa0334620 MtrunA17_Chr3g0106201 27.139 409 244 16 4 389 8 385 3.30e-29 122
Msa0334620 MtrunA17_Chr4g0053161 27.891 441 261 17 6 416 24 437 1.58e-28 120
Msa0334620 MtrunA17_Chr3g0106221 27.750 400 241 17 7 380 10 387 9.71e-28 118
Msa0334620 MtrunA17_Chr8g0360201 29.316 307 187 8 123 421 22 306 2.34e-27 116
Msa0334620 MtrunA17_Chr7g0237351 28.212 397 245 16 6 380 4 382 5.48e-27 115
Msa0334620 MtrunA17_Chr4g0023111 26.777 422 248 20 24 404 31 432 1.27e-26 114
Msa0334620 MtrunA17_Chr3g0106121 26.214 412 250 17 3 389 4 386 3.04e-25 110
Msa0334620 MtrunA17_Chr7g0236591 33.649 211 134 4 23 230 54 261 3.75e-25 105
Msa0334620 MtrunA17_Chr3g0106131 25.735 408 239 16 3 380 4 377 5.23e-25 109
Msa0334620 MtrunA17_Chr7g0237341 26.975 367 220 16 36 380 41 381 6.35e-25 109
Msa0334620 MtrunA17_Chr2g0318941 41.667 132 67 3 308 437 1 124 6.48e-25 103
Msa0334620 MtrunA17_Chr7g0237391 27.363 402 247 13 36 416 40 417 7.03e-24 106
Msa0334620 MtrunA17_Chr3g0106141 25.495 404 259 13 7 389 4 386 1.02e-23 105
Msa0334620 MtrunA17_Chr4g0055001 38.519 135 73 4 293 421 14 144 1.98e-23 96.7
Msa0334620 MtrunA17_Chr7g0237331 29.144 374 207 17 36 382 42 384 2.85e-23 104
Msa0334620 MtrunA17_Chr3g0106211 25.490 408 243 16 12 390 16 391 8.03e-23 102
Msa0334620 MtrunA17_Chr7g0257821 25.990 404 252 19 6 394 12 383 1.24e-19 92.8
Msa0334620 MtrunA17_Chr3g0106191 23.677 359 225 8 75 416 1 327 1.89e-19 92.0
Msa0334620 MtrunA17_Chr8g0357691 24.439 401 239 15 24 414 37 383 7.02e-18 87.4
Msa0334620 MtrunA17_Chr1g0162031 25.253 198 114 3 165 355 12 182 1.53e-17 82.4
Msa0334620 MtrunA17_Chr3g0134321 32.203 177 102 6 22 191 19 184 5.01e-17 84.3
Msa0334620 MtrunA17_Chr8g0357931 24.113 423 255 16 1 407 1 373 2.28e-15 79.3
Msa0334620 MtrunA17_Chr8g0361291 43.678 87 28 2 301 387 4 69 2.42e-15 71.6
Msa0334620 MtrunA17_Chr7g0234561 26.974 304 191 11 89 380 38 322 2.63e-15 79.0
Msa0334620 MtrunA17_Chr5g0435321 45.946 74 40 0 334 407 8 81 4.25e-15 70.9
Msa0334620 MtrunA17_Chr8g0358031 25.517 290 198 7 6 288 12 290 4.22e-14 75.5
Msa0334620 MtrunA17_Chr8g0357991 23.892 406 263 17 6 402 11 379 5.85e-14 75.1
Msa0334620 MtrunA17_Chr8g0358071 26.667 195 138 3 73 263 80 273 2.76e-13 72.8
Msa0334620 MtrunA17_Chr4g0048671 44.928 69 38 0 24 92 25 93 5.82e-13 65.1
Msa0334620 MtrunA17_Chr8g0357961 25.000 236 159 7 73 305 75 295 6.23e-13 71.6
Msa0334620 MtrunA17_Chr8g0338501 24.215 446 271 23 18 428 50 463 1.18e-12 70.9
Msa0334620 MtrunA17_Chr8g0357631 29.148 223 149 7 23 240 36 254 1.74e-12 70.1
Msa0334620 MtrunA17_Chr8g0357821 32.895 152 97 4 24 172 40 189 1.98e-12 66.6
Msa0334620 MtrunA17_Chr4g0063701 24.917 301 176 12 39 311 54 332 2.55e-12 69.7
Msa0334620 MtrunA17_Chr8g0338511 25.786 318 193 14 22 311 30 332 5.63e-12 67.8
Msa0334620 MtrunA17_Chr8g0358151 22.779 439 261 21 6 428 11 387 1.15e-11 66.6
Msa0334620 MtrunA17_Chr8g0357801 23.308 399 255 12 6 398 11 364 2.07e-11 66.6
Msa0334620 MtrunA17_Chr8g0358051 29.891 184 100 6 2 171 5 173 2.31e-11 62.8
Msa0334620 MtrunA17_Chr8g0357651 32.927 164 101 6 8 165 20 180 2.50e-11 66.6
Msa0334620 MtrunA17_Chr2g0281251 37.647 85 50 2 234 317 9 91 2.86e-11 60.1
Msa0334620 MtrunA17_Chr2g0318171 23.670 376 229 14 25 379 36 374 3.75e-11 65.9
Msa0334620 MtrunA17_Chr7g0274221 35.507 138 65 6 301 422 26 155 4.49e-11 61.2
Msa0334620 MtrunA17_Chr8g0358101 25.547 274 178 7 1 262 4 263 7.76e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0334620 AT4G27290.1 42.056 428 241 3 1 421 1 428 5.08e-120 372
Msa0334620 AT4G27290.2 42.056 428 241 3 1 421 1 428 1.58e-119 372
Msa0334620 AT4G21380.2 37.975 395 240 4 31 421 39 432 4.77e-101 317
Msa0334620 AT4G21380.1 37.975 395 240 4 31 421 39 432 7.97e-99 318
Msa0334620 AT1G65790.3 39.186 393 234 4 31 421 37 426 7.22e-98 309
Msa0334620 AT1G65790.2 39.186 393 234 4 31 421 37 426 7.22e-98 309
Msa0334620 AT1G65790.1 39.186 393 234 4 31 421 37 426 1.16e-95 309
Msa0334620 AT1G65800.2 37.530 413 243 8 16 421 26 430 2.94e-91 292
Msa0334620 AT1G11340.2 37.324 426 254 7 22 435 86 510 6.80e-90 292
Msa0334620 AT1G11340.3 37.324 426 254 7 22 435 86 510 1.64e-89 292
Msa0334620 AT1G11340.1 37.324 426 254 7 22 435 18 442 2.03e-89 292
Msa0334620 AT1G65800.1 37.530 413 243 8 16 421 26 430 4.01e-89 292
Msa0334620 AT4G27300.1 38.835 412 231 10 25 421 27 432 5.49e-89 291
Msa0334620 AT3G12000.1 39.031 392 218 10 17 395 32 415 2.34e-86 274
Msa0334620 AT1G11410.1 37.255 408 244 7 25 422 24 429 2.54e-84 279
Msa0334620 AT1G11410.4 37.255 408 244 7 25 422 31 436 2.95e-84 279
Msa0334620 AT1G11410.3 36.973 403 242 7 30 422 5 405 7.20e-83 275
Msa0334620 AT1G61610.2 33.030 439 271 6 7 428 10 442 8.96e-77 257
Msa0334620 AT1G61610.1 33.030 439 271 6 7 428 10 442 2.89e-76 257
Msa0334620 AT4G21390.2 34.884 430 251 10 11 422 14 432 7.16e-76 255
Msa0334620 AT4G21390.1 34.884 430 251 10 11 422 14 432 1.32e-75 256
Msa0334620 AT1G61380.1 33.860 443 260 10 6 432 4 429 1.29e-72 247
Msa0334620 AT1G61390.1 33.566 429 263 7 6 422 25 443 8.25e-72 245
Msa0334620 AT1G61430.2 31.207 439 280 8 5 436 5 428 4.82e-71 238
Msa0334620 AT1G61430.6 31.207 439 280 8 5 436 5 428 4.82e-71 238
Msa0334620 AT1G11300.2 32.168 429 263 11 10 421 12 429 9.57e-71 242
Msa0334620 AT1G11300.1 32.168 429 263 11 10 421 12 429 1.15e-70 242
Msa0334620 AT1G11330.3 33.170 407 243 7 34 421 43 439 1.70e-70 240
Msa0334620 AT1G61430.4 32.598 408 253 8 36 436 13 405 5.48e-70 234
Msa0334620 AT1G61430.5 31.207 439 280 8 5 436 5 428 7.17e-70 238
Msa0334620 AT1G61430.8 31.207 439 280 8 5 436 5 428 7.18e-70 238
Msa0334620 AT1G61430.7 31.207 439 280 8 5 436 5 428 7.18e-70 238
Msa0334620 AT1G11330.2 33.170 407 243 7 34 421 43 439 7.80e-70 240
Msa0334620 AT1G11330.1 33.170 407 243 7 34 421 43 439 8.58e-70 239
Msa0334620 AT1G61430.3 31.616 427 270 8 17 436 26 437 8.71e-70 235
Msa0334620 AT1G61430.1 31.207 439 280 8 5 436 5 428 1.94e-69 238
Msa0334620 AT1G61430.9 31.207 439 280 8 5 436 5 428 2.17e-69 238
Msa0334620 AT1G61430.10 32.598 408 253 8 36 436 13 405 8.46e-69 234
Msa0334620 AT1G61430.11 32.598 408 253 8 36 436 13 405 2.11e-68 235
Msa0334620 AT1G61430.12 32.598 408 253 8 36 436 13 405 2.11e-68 235
Msa0334620 AT1G61430.13 32.598 408 253 8 36 436 13 405 2.11e-68 235
Msa0334620 AT1G61400.1 34.783 414 250 9 19 424 30 431 5.21e-68 234
Msa0334620 AT1G61400.2 34.783 414 250 9 19 424 30 431 5.73e-68 234
Msa0334620 AT1G61490.4 32.471 425 267 9 6 422 7 419 1.14e-67 233
Msa0334620 AT1G61490.1 32.471 425 267 9 6 422 7 419 1.14e-67 233
Msa0334620 AT1G61490.2 32.471 425 267 9 6 422 7 419 1.14e-67 233
Msa0334620 AT1G61490.5 32.471 425 267 9 6 422 7 419 1.14e-67 233
Msa0334620 AT1G61420.1 35.264 397 234 7 36 422 36 419 3.67e-67 232
Msa0334620 AT1G61420.2 35.264 397 234 7 36 422 36 419 4.71e-67 232
Msa0334620 AT1G61420.4 35.264 397 234 7 36 422 36 419 4.71e-67 232
Msa0334620 AT1G61440.3 32.287 446 268 12 1 436 1 422 1.04e-66 231
Msa0334620 AT1G61440.1 32.287 446 268 12 1 436 1 422 1.43e-66 230
Msa0334620 AT1G61440.2 32.353 442 265 12 5 436 5 422 2.10e-66 230
Msa0334620 AT1G11350.1 32.530 415 253 10 24 421 23 427 3.44e-66 229
Msa0334620 AT1G61360.1 32.658 444 269 8 7 436 3 430 3.84e-66 229
Msa0334620 AT1G11303.1 31.797 434 273 10 2 421 5 429 4.19e-66 229
Msa0334620 AT2G19130.1 31.871 433 276 10 1 421 1 426 5.84e-66 229
Msa0334620 AT1G61490.6 32.151 423 245 7 6 422 7 393 1.02e-64 225
Msa0334620 AT1G61490.7 32.151 423 245 7 6 422 7 393 1.02e-64 225
Msa0334620 AT1G61500.3 32.624 423 265 8 8 421 13 424 1.13e-64 225
Msa0334620 AT1G61500.1 32.791 430 268 9 1 421 2 419 1.24e-64 225
Msa0334620 AT1G61370.1 32.870 432 264 9 4 422 9 427 3.09e-64 224
Msa0334620 AT1G61480.1 31.529 425 265 9 6 422 13 419 3.74e-64 224
Msa0334620 AT1G61500.2 33.668 398 245 7 32 421 15 401 6.32e-64 223
Msa0334620 AT1G11280.5 31.707 410 258 7 25 422 29 428 3.54e-63 219
Msa0334620 AT1G11280.2 32.010 403 252 7 32 422 36 428 1.20e-62 220
Msa0334620 AT1G11280.1 31.707 410 258 7 25 422 39 438 1.59e-62 219
Msa0334620 AT1G11280.4 31.707 410 258 7 25 422 39 438 1.68e-62 219
Msa0334620 AT1G11280.3 32.010 403 252 7 32 422 36 428 1.70e-62 219
Msa0334620 AT1G11410.2 38.835 309 181 5 120 422 8 314 7.03e-62 216
Msa0334620 AT1G61550.1 31.640 433 276 7 10 436 6 424 3.31e-61 216
Msa0334620 AT1G61460.1 32.832 399 214 9 32 422 33 385 1.76e-59 210
Msa0334620 AT4G03230.8 30.394 431 259 14 24 431 27 439 2.08e-55 200
Msa0334620 AT4G03230.4 30.641 421 251 14 24 421 27 429 5.04e-54 197
Msa0334620 AT4G03230.1 30.641 421 251 14 24 421 27 429 5.04e-54 197
Msa0334620 AT1G61360.2 33.718 347 205 7 89 421 4 339 8.19e-49 180
Msa0334620 AT1G61360.3 33.718 347 205 7 89 421 4 339 8.19e-49 180
Msa0334620 AT1G61360.4 33.718 347 205 7 89 421 4 339 8.19e-49 180
Msa0334620 AT4G00340.2 29.050 358 233 9 32 380 27 372 7.55e-43 163
Msa0334620 AT4G00340.1 29.050 358 233 9 32 380 27 372 8.98e-43 163
Msa0334620 AT4G11900.10 28.571 455 273 15 6 421 10 451 3.24e-42 160
Msa0334620 AT4G11900.5 28.571 455 273 15 6 421 10 451 3.24e-42 160
Msa0334620 AT4G11900.2 28.571 455 273 15 6 421 10 451 5.38e-42 160
Msa0334620 AT4G11900.3 28.571 455 273 15 6 421 10 451 5.38e-42 160
Msa0334620 AT4G11900.7 28.571 455 273 15 6 421 10 451 5.74e-42 160
Msa0334620 AT4G11900.6 28.571 455 273 15 6 421 10 451 6.18e-42 160
Msa0334620 AT4G11900.4 28.571 455 273 15 6 421 10 451 6.18e-42 160
Msa0334620 AT4G11900.1 28.571 455 273 15 6 421 10 451 8.70e-42 160
Msa0334620 AT1G61380.2 32.881 295 171 7 152 432 1 282 1.63e-41 158
Msa0334620 AT1G61390.2 32.155 283 172 5 152 422 1 275 2.04e-40 155
Msa0334620 AT1G61490.3 31.183 279 174 7 152 422 1 269 2.91e-39 152
Msa0334620 AT4G03230.5 29.565 345 207 12 95 421 31 357 1.86e-37 148
Msa0334620 AT1G61420.3 32.740 281 167 6 152 422 1 269 3.13e-37 146
Msa0334620 AT1G61420.5 32.740 281 167 6 152 422 1 269 3.17e-37 146
Msa0334620 AT1G61370.2 32.707 266 158 6 170 422 19 276 3.12e-34 137
Msa0334620 AT4G11900.8 28.101 395 236 14 62 421 1 382 3.82e-34 137
Msa0334620 AT4G11900.9 28.101 395 236 14 62 421 1 382 7.34e-34 137
Msa0334620 AT3G16030.1 27.427 412 270 10 24 422 25 420 2.72e-31 129
Msa0334620 AT3G16030.3 27.143 420 264 12 24 418 25 427 5.02e-28 119
Msa0334620 AT3G16030.8 27.143 420 264 12 24 418 25 427 5.02e-28 119
Msa0334620 AT3G16030.5 27.143 420 264 12 24 418 25 427 5.02e-28 119
Msa0334620 AT3G16030.6 27.143 420 264 12 24 418 25 427 5.03e-28 119
Msa0334620 AT3G16030.7 27.143 420 264 12 24 418 25 427 7.09e-28 118
Msa0334620 AT3G16030.4 27.143 420 264 12 24 418 25 427 8.63e-28 118
Msa0334620 AT1G67520.4 31.119 286 172 7 24 297 25 297 1.52e-26 114
Msa0334620 AT1G67520.1 33.188 229 140 5 24 243 25 249 3.33e-25 110
Msa0334620 AT1G67520.2 33.188 229 140 5 24 243 25 249 5.16e-25 109
Msa0334620 AT1G67520.6 33.188 229 140 5 24 243 32 256 5.60e-25 110
Msa0334620 AT1G67520.3 33.188 229 140 5 24 243 25 249 6.71e-25 109
Msa0334620 AT4G03230.2 25.797 345 192 13 95 421 31 329 5.14e-23 103
Msa0334620 AT4G03230.6 25.797 345 192 13 95 421 31 329 5.14e-23 103
Msa0334620 AT4G03230.7 27.562 283 171 11 155 421 8 272 9.62e-22 100
Msa0334620 AT4G03230.3 27.305 282 171 11 156 421 1 264 3.84e-21 98.2
Msa0334620 AT5G18470.1 27.437 277 181 5 6 263 13 288 5.74e-19 89.7
Msa0334620 AT5G39370.1 35.659 129 77 5 62 186 1 127 1.71e-17 79.3
Msa0334620 AT1G78820.1 33.714 175 98 8 73 246 94 251 1.40e-14 76.6
Msa0334620 AT1G78830.1 33.714 175 98 8 73 246 94 251 1.90e-14 76.3
Msa0334620 AT5G24080.2 23.060 464 280 22 6 418 11 448 7.31e-14 75.1
Msa0334620 AT2G24620.1 31.507 146 86 4 170 307 15 154 9.29e-13 66.6

Find 107 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATATGTGAATGTCTTAA+AGG 0.097690 2_4:-53184413 Msa0334620:CDS
GATTCAAATATTCAATATTT+TGG 0.119685 2_4:-53185160 Msa0334620:CDS
GCTTTGGTTTAATAACATTT+TGG 0.215017 2_4:-53184141 Msa0334620:CDS
AGAGTTGCAGCTTCAGAATT+AGG 0.233254 2_4:-53184077 Msa0334620:intron
CTGCGAGTTGGTTGCGAGTT+GGG 0.239264 2_4:+53181960 None:intergenic
TCCTGGAACAATGGTTTCTA+AGG 0.258758 2_4:+53185255 None:intergenic
AAAAGTGGAATTCGCAAATT+TGG 0.259013 2_4:-53184370 Msa0334620:CDS
TTCTTATGGATATGAACTTT+TGG 0.276035 2_4:-53184603 Msa0334620:CDS
ATTATACAGGTTTGGTATCT+TGG 0.277497 2_4:-53184823 Msa0334620:CDS
GAAGCAGGTTTCTTCAACTT+TGG 0.293369 2_4:-53185184 Msa0334620:CDS
ATTAGAACCAACTTAGTAAA+TGG 0.313763 2_4:-53184848 Msa0334620:CDS
TGAACAAACAATTATTATCT+TGG 0.314727 2_4:+53181086 None:intergenic
ACTGAAGAGGAAGTTTCTTA+TGG 0.314826 2_4:-53184617 Msa0334620:CDS
CCTAGTGATACTTTGATTCC+AGG 0.317453 2_4:-53184878 Msa0334620:CDS
CCTTTAAGACATTCACATAT+TGG 0.330701 2_4:+53184413 None:intergenic
ATTGTGAAACTCTTGGAAAA+TGG 0.337986 2_4:-53184962 Msa0334620:CDS
GTGGAAGTGGCTGCTTGCTT+TGG 0.347064 2_4:-53184157 Msa0334620:CDS
ACTTGTCTTTGTTGGTCCTT+CGG 0.356106 2_4:-53184495 Msa0334620:CDS
TTAGTAAATGGTAATTATAC+AGG 0.367794 2_4:-53184836 Msa0334620:CDS
TGCCAGATACATCAAAATCT+TGG 0.370812 2_4:-53184271 Msa0334620:CDS
GTCATGATGGGATTGTTCTC+GGG 0.377977 2_4:-53181141 Msa0334620:CDS
TATTATTTAGAGTAGGTTCA+TGG 0.382576 2_4:-53184709 Msa0334620:CDS
CGAATCTCTCACATTCTTCA+AGG 0.391891 2_4:+53184231 None:intergenic
TTGCTATTGTTGATTTCAAA+GGG 0.404860 2_4:-53185030 Msa0334620:CDS
TTTGGTCGGATGGTTGTGTT+AGG 0.405163 2_4:-53184352 Msa0334620:CDS
ACCTTAGAAACCATTGTTCC+AGG 0.409153 2_4:-53185256 Msa0334620:CDS
AGTTGGCAACTTGTCTTTGT+TGG 0.414722 2_4:-53184503 Msa0334620:CDS
ATTTCAAAGGGGCTATGATA+TGG 0.416100 2_4:-53185018 Msa0334620:CDS
GTTCCACTAGGAAACTTATC+AGG 0.421096 2_4:-53185082 Msa0334620:CDS
AATGGTTTCTAAGGTATTGA+AGG 0.423579 2_4:+53185264 None:intergenic
GGTCATGATGGGATTGTTCT+CGG 0.431439 2_4:-53181142 Msa0334620:CDS
ATAATTACCATTTACTAAGT+TGG 0.439990 2_4:+53184841 None:intergenic
AGATTAAAGTCTCATTATGT+TGG 0.441840 2_4:+53185224 None:intergenic
TGCGAGTTGGTTGCGAGTTG+GGG 0.445456 2_4:+53181961 None:intergenic
CTAATGAATGGAAAGCTTCA+AGG 0.452484 2_4:-53185326 None:intergenic
AATCACAAATGTAAAATTGA+AGG 0.454049 2_4:+53184640 None:intergenic
AAATGGTAATTATACAGGTT+TGG 0.455331 2_4:-53184831 Msa0334620:CDS
TTCCAAAATCTCAAGAAAAG+TGG 0.463617 2_4:-53184385 Msa0334620:CDS
CTTGCTATTGTTGATTTCAA+AGG 0.464243 2_4:-53185031 Msa0334620:CDS
TGGACAAATCCATTGTTTCA+AGG 0.470645 2_4:-53184583 Msa0334620:CDS
ACTGCGAGTTGGTTGCGAGT+TGG 0.477220 2_4:+53181959 None:intergenic
GTTTCTAAGGTATTGAAGGT+TGG 0.479402 2_4:+53185268 None:intergenic
GAATGTGAGAGATTCGGTAT+TGG 0.480153 2_4:-53184224 Msa0334620:CDS
CTTGAAGAATGTGAGAGATT+CGG 0.490718 2_4:-53184230 Msa0334620:CDS
TACGGGAGGTTCTCGACTCA+AGG 0.491819 2_4:-53181225 Msa0334620:CDS
TCATATCATATAGATACTAA+TGG 0.493800 2_4:-53184767 Msa0334620:CDS
TGTACGTACATCGGTCATGA+TGG 0.494332 2_4:-53181154 Msa0334620:CDS
GAATTGCTCGCTAGGCGAGC+TGG 0.494670 2_4:-53182008 Msa0334620:CDS
TACATTTGTGATTACTGAAG+AGG 0.504893 2_4:-53184630 Msa0334620:CDS
GAAACCGATTGTGAAACTCT+TGG 0.505073 2_4:-53184969 Msa0334620:CDS
GAGAGATTGTCCTGGAACAA+TGG 0.505791 2_4:+53185246 None:intergenic
GATATCAGAGATGGTGGAAG+TGG 0.514608 2_4:-53184170 Msa0334620:CDS
TTTAGAGTAGGTTCATGGAA+TGG 0.520334 2_4:-53184704 Msa0334620:CDS
TTGGTTCTAATTCTCATACC+TGG 0.525446 2_4:+53184860 None:intergenic
GGACTCCCTCGGTGTCGTGC+GGG 0.529415 2_4:+53181179 None:intergenic
AATTCGCAAATTTGGTCGGA+TGG 0.529514 2_4:-53184362 Msa0334620:CDS
TTGCCAACTCTTTGTCTGAT+CGG 0.529613 2_4:+53184517 None:intergenic
GTAAAGGTCTTGTCCTCCAG+AGG 0.533943 2_4:+53184103 None:intergenic
TATTGAAGGTTGGTATGAAG+TGG 0.538732 2_4:+53185278 None:intergenic
CCACAAAATACTATCTGAGT+TGG 0.540448 2_4:+53184916 None:intergenic
TATGAATACAAACCAGTAGC+AGG 0.541043 2_4:+53184785 None:intergenic
GATGTCAGAAAATTACCCTC+TGG 0.541476 2_4:-53184119 Msa0334620:CDS
AAGCTGCAACTCTTATGTAA+AGG 0.543186 2_4:+53184087 None:intergenic
ACGGGAGGTTCTCGACTCAA+GGG 0.543756 2_4:-53181224 Msa0334620:CDS
CCTGGAATCAAAGTATCACT+AGG 0.547773 2_4:+53184878 None:intergenic
AGGTACATGCTAACTCCAAT+CGG 0.550542 2_4:-53184563 Msa0334620:CDS
TTATGTTGGAGAGATTGTCC+TGG 0.554179 2_4:+53185238 None:intergenic
GTACGTACATCGGTCATGAT+GGG 0.554487 2_4:-53181153 Msa0334620:CDS
CGGACTCCCTCGGTGTCGTG+CGG 0.558698 2_4:+53181178 None:intergenic
TAACGCGATACTTGACCGAT+TGG 0.559704 2_4:+53184548 None:intergenic
GACACGCAAGATCCTGCTAC+TGG 0.560635 2_4:-53184797 Msa0334620:CDS
GGTTCTCGACTCAAGGGGAA+TGG 0.564254 2_4:-53181218 Msa0334620:CDS
TAGGCGAGCTGGAAACAGCA+AGG 0.564457 2_4:-53181997 Msa0334620:CDS
GGGGAATGGTTCAAGCCGCA+AGG 0.567497 2_4:-53181204 Msa0334620:CDS
GTGGAATTCGCAAATTTGGT+CGG 0.576115 2_4:-53184366 Msa0334620:CDS
AGGCGAGCTGGAAACAGCAA+GGG 0.578729 2_4:-53181996 Msa0334620:CDS
TCATGATGGGATTGTTCTCG+GGG 0.579338 2_4:-53181140 Msa0334620:CDS
AGGGACCCGCACGACACCGA+GGG 0.583715 2_4:-53181184 Msa0334620:CDS
TAGCATGTACCTTGAAACAA+TGG 0.586385 2_4:+53184574 None:intergenic
AATTTAGATATCAGAGATGG+TGG 0.598151 2_4:-53184176 Msa0334620:CDS
TAATTATCGCACTGATCCGA+AGG 0.599332 2_4:+53184479 None:intergenic
GGGAATGGTTCAAGCCGCAA+GGG 0.599770 2_4:-53181203 Msa0334620:CDS
GGCGAGTAGAATTGCTCGCT+AGG 0.609444 2_4:-53182016 Msa0334620:CDS
ACTCCTGATAAGTTTCCTAG+TGG 0.609773 2_4:+53185079 None:intergenic
GTACGTACATCGGACTCCCT+CGG 0.614722 2_4:+53181168 None:intergenic
GCAAATAGAAATGTTCCACT+AGG 0.615188 2_4:-53185094 Msa0334620:CDS
TGGTCTCATCTTTCACAACA+AGG 0.615899 2_4:+53184936 None:intergenic
TTTCTATTTGCTATCCACAC+AGG 0.618534 2_4:+53185106 None:intergenic
GCAAATTTAGATATCAGAGA+TGG 0.619395 2_4:-53184179 Msa0334620:CDS
TAAAGGTCTTGTCCTCCAGA+GGG 0.624577 2_4:+53184104 None:intergenic
GGCGAGCTGGAAACAGCAAG+GGG 0.625038 2_4:-53181995 Msa0334620:CDS
AACACATTATTATTTAGAGT+AGG 0.627263 2_4:-53184716 Msa0334620:CDS
CATTACTCGCCACTGCGAGT+TGG 0.627753 2_4:+53181948 None:intergenic
TCTCGGGGTTACTCCACCCG+AGG 0.631926 2_4:-53181125 Msa0334620:CDS
CGGGAGGTTCTCGACTCAAG+GGG 0.636796 2_4:-53181223 Msa0334620:CDS
AACTCGCAACCAACTCGCAG+TGG 0.638318 2_4:-53181957 Msa0334620:CDS
GTCAGAAAATTACCCTCTGG+AGG 0.641964 2_4:-53184116 Msa0334620:CDS
TGCTATTGTTGATTTCAAAG+GGG 0.650544 2_4:-53185029 Msa0334620:CDS
TGTCCGATCAGACAAAGAGT+TGG 0.651165 2_4:-53184520 Msa0334620:CDS
GCGAGTTGGTTGCGAGTTGG+GGG 0.657645 2_4:+53181962 None:intergenic
AAGGGACCCGCACGACACCG+AGG 0.667260 2_4:-53181185 Msa0334620:CDS
TGGACTGTCATAACTCGCAA+CGG 0.691667 2_4:-53182037 Msa0334620:CDS
GGTGTCGTGCGGGTCCCTTG+CGG 0.692458 2_4:+53181189 None:intergenic
CATGACCGATGTACGTACAT+CGG 0.695227 2_4:+53181158 None:intergenic
GGAGTCCGATGTACGTACAT+CGG 0.701046 2_4:-53181163 Msa0334620:CDS
TGCGATAATTATGTTCTCTG+TGG 0.707211 2_4:-53184467 Msa0334620:CDS
GCGAGCTGGAAACAGCAAGG+GGG 0.768425 2_4:-53181994 Msa0334620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGGTTTTTTTTTTTTTTTTA+AGG - chr2_4:53182992-53183011 Msa0334620:intron 10.0%
!!! GATTCAAATATTCAATATTT+TGG - chr2_4:53181180-53181199 Msa0334620:CDS 15.0%
!!! ATATTCAATATTTTGGTATA+TGG - chr2_4:53181187-53181206 Msa0334620:CDS 15.0%
!! NNNNNNNNAGATAAAGTAGA+AGG - chr2_4:53182740-53182759 Msa0334620:intron 15.0%
!!! AATTTTGTACATATATGATA+TGG + chr2_4:53182904-53182923 None:intergenic 15.0%
!!! GTTTTGAATCTTACAAATAA+AGG - chr2_4:53181282-53181301 Msa0334620:intron 20.0%
!! ATAATTACCATTTACTAAGT+TGG + chr2_4:53181502-53181521 None:intergenic 20.0%
!! TTAGTAAATGGTAATTATAC+AGG - chr2_4:53181504-53181523 Msa0334620:intron 20.0%
!! TCATATCATATAGATACTAA+TGG - chr2_4:53181573-53181592 Msa0334620:intron 20.0%
!!! AACACATTATTATTTAGAGT+AGG - chr2_4:53181624-53181643 Msa0334620:intron 20.0%
!! AATCACAAATGTAAAATTGA+AGG + chr2_4:53181703-53181722 None:intergenic 20.0%
!! AACTAATATTGAACAAATCA+AGG + chr2_4:53182531-53182550 None:intergenic 20.0%
!! AAAAGAAAGTAAAACAAAGT+GGG - chr2_4:53182829-53182848 Msa0334620:intron 20.0%
!! TAAAGGATATTTATTTGTGT+TGG - chr2_4:53183619-53183638 Msa0334620:intron 20.0%
!! AAAGGATATTTATTTGTGTT+GGG - chr2_4:53183620-53183639 Msa0334620:intron 20.0%
!!! AAAGCAAGTATTTTATATGT+TGG - chr2_4:53184596-53184615 Msa0334620:CDS 20.0%
!!! TTTTATATGTTGGAAAAGTA+TGG - chr2_4:53184606-53184625 Msa0334620:CDS 20.0%
!! GTATGAAATTTACCATTAAT+CGG - chr2_4:53184852-53184871 Msa0334620:CDS 20.0%
!! TTTAACCTAAATTAACAACA+AGG - chr2_4:53184916-53184935 Msa0334620:CDS 20.0%
!!! TATTATCTTGGTTCATTTTA+CGG + chr2_4:53185245-53185264 None:intergenic 20.0%
!! TGAACAAACAATTATTATCT+TGG + chr2_4:53185257-53185276 None:intergenic 20.0%
! AGATTAAAGTCTCATTATGT+TGG + chr2_4:53181119-53181138 None:intergenic 25.0%
!!! TTGCTATTGTTGATTTCAAA+GGG - chr2_4:53181310-53181329 Msa0334620:intron 25.0%
!!! TACTGTTTTTGATGTATTAG+AGG + chr2_4:53181349-53181368 None:intergenic 25.0%
! ATTAGAACCAACTTAGTAAA+TGG - chr2_4:53181492-53181511 Msa0334620:intron 25.0%
! AAATGGTAATTATACAGGTT+TGG - chr2_4:53181509-53181528 Msa0334620:intron 25.0%
!! TATTATTTAGAGTAGGTTCA+TGG - chr2_4:53181631-53181650 Msa0334620:intron 25.0%
!! TGGAATGGAAATATTTTATC+TGG - chr2_4:53181651-53181670 Msa0334620:intron 25.0%
!! TTCTTATGGATATGAACTTT+TGG - chr2_4:53181737-53181756 Msa0334620:intron 25.0%
!! TGATAGATTTTCGAAACTTA+TGG - chr2_4:53182037-53182056 Msa0334620:CDS 25.0%
!! GATAGATTTTCGAAACTTAT+GGG - chr2_4:53182038-53182057 Msa0334620:CDS 25.0%
!!! GCTTTGGTTTAATAACATTT+TGG - chr2_4:53182199-53182218 Msa0334620:intron 25.0%
!!! TTACTAAGTGTTGGTAAAAA+TGG + chr2_4:53182407-53182426 None:intergenic 25.0%
!! ACCAACACTTAGTAATTTTA+AGG - chr2_4:53182412-53182431 Msa0334620:intron 25.0%
! TCCTTAAAATTACTAAGTGT+TGG + chr2_4:53182416-53182435 None:intergenic 25.0%
! AGTTCAATGAATACAGAAAT+TGG + chr2_4:53182499-53182518 None:intergenic 25.0%
!!! TGCTTTTTGATGTTAACTAT+TGG - chr2_4:53182610-53182629 Msa0334620:intron 25.0%
!!! AAGCAAGACATTTTTTAATG+TGG - chr2_4:53182763-53182782 Msa0334620:intron 25.0%
!!! AGCAAGACATTTTTTAATGT+GGG - chr2_4:53182764-53182783 Msa0334620:intron 25.0%
! CAAAAGAAAGTAAAACAAAG+TGG - chr2_4:53182828-53182847 Msa0334620:intron 25.0%
! AAAGAAAGTAAAACAAAGTG+GGG - chr2_4:53182830-53182849 Msa0334620:intron 25.0%
!! CTAGTATTTCTACAAAAATC+TGG - chr2_4:53183061-53183080 Msa0334620:intron 25.0%
! TTCCATAAATTTAATTCCTC+TGG + chr2_4:53183494-53183513 None:intergenic 25.0%
! ATTTATGGAAAGTAAGTCAA+TGG - chr2_4:53183504-53183523 Msa0334620:intron 25.0%
! TATGACATGTCAACATAAAA+CGG - chr2_4:53183535-53183554 Msa0334620:intron 25.0%
!! TTTGGTAATTGCATGTTTAA+AGG - chr2_4:53183602-53183621 Msa0334620:intron 25.0%
! ATTTGATGAATTATTGAGGT+GGG + chr2_4:53183744-53183763 None:intergenic 25.0%
! GAAGATTTGATGAATTATTG+AGG + chr2_4:53183748-53183767 None:intergenic 25.0%
!! TCATGATCTTTTAAGCTTAA+GGG - chr2_4:53183802-53183821 Msa0334620:intron 25.0%
! AGATAAAAACATAATCCCAA+GGG + chr2_4:53184093-53184112 None:intergenic 25.0%
! AAGATAAAAACATAATCCCA+AGG + chr2_4:53184094-53184113 None:intergenic 25.0%
!!! GATTATGTTTTTATCTTGCA+AGG - chr2_4:53184097-53184116 Msa0334620:CDS 25.0%
! GCAAGGATAATATGAATATT+AGG - chr2_4:53184114-53184133 Msa0334620:CDS 25.0%
! TACTTGTACATTCTTAATCA+TGG + chr2_4:53184835-53184854 None:intergenic 25.0%
!!! TAATCTTAGTCTTGCATTTT+CGG + chr2_4:53185048-53185067 None:intergenic 25.0%
!! AATGGTTTCTAAGGTATTGA+AGG + chr2_4:53181079-53181098 None:intergenic 30.0%
!! CTTGCTATTGTTGATTTCAA+AGG - chr2_4:53181309-53181328 Msa0334620:intron 30.0%
!! TGCTATTGTTGATTTCAAAG+GGG - chr2_4:53181311-53181330 Msa0334620:intron 30.0%
! TTTTCCAAGAGTTTCACAAT+CGG + chr2_4:53181378-53181397 None:intergenic 30.0%
ATTGTGAAACTCTTGGAAAA+TGG - chr2_4:53181378-53181397 Msa0334620:intron 30.0%
! ATTATACAGGTTTGGTATCT+TGG - chr2_4:53181517-53181536 Msa0334620:intron 30.0%
!!! CCTTTTTTAATCACTACTTG+AGG + chr2_4:53181603-53181622 None:intergenic 30.0%
CCTCAAGTAGTGATTAAAAA+AGG - chr2_4:53181600-53181619 Msa0334620:intron 30.0%
TACATTTGTGATTACTGAAG+AGG - chr2_4:53181710-53181729 Msa0334620:intron 30.0%
!! CCTTTAAGACATTCACATAT+TGG + chr2_4:53181930-53181949 None:intergenic 30.0%
CCAATATGTGAATGTCTTAA+AGG - chr2_4:53181927-53181946 Msa0334620:intron 30.0%
TTCCAAAATCTCAAGAAAAG+TGG - chr2_4:53181955-53181974 Msa0334620:CDS 30.0%
!! TTCCACTTTTCTTGAGATTT+TGG + chr2_4:53181960-53181979 None:intergenic 30.0%
AAAAGTGGAATTCGCAAATT+TGG - chr2_4:53181970-53181989 Msa0334620:CDS 30.0%
!! AACCAAGATTTTGATGTATC+TGG + chr2_4:53182074-53182093 None:intergenic 30.0%
GCAAATTTAGATATCAGAGA+TGG - chr2_4:53182161-53182180 Msa0334620:intron 30.0%
AATTTAGATATCAGAGATGG+TGG - chr2_4:53182164-53182183 Msa0334620:intron 30.0%
CGGAAATTCGGAATATTAAA+TGG + chr2_4:53182312-53182331 None:intergenic 30.0%
TAAACATTTCATGTTCCATG+TGG + chr2_4:53182358-53182377 None:intergenic 30.0%
TTGCTATACATAGAAATCCA+TGG - chr2_4:53182549-53182568 Msa0334620:intron 30.0%
ATAATAACTATATGCAGCCA+TGG + chr2_4:53182569-53182588 None:intergenic 30.0%
!!! GCAAGACATTTTTTAATGTG+GGG - chr2_4:53182765-53182784 Msa0334620:intron 30.0%
TATATGATATGGAACATGCA+CGG + chr2_4:53182893-53182912 None:intergenic 30.0%
TTGTTAGCAGACAAATAGTT+AGG - chr2_4:53182956-53182975 Msa0334620:intron 30.0%
ATCAGGATGTTACAGAATTT+GGG + chr2_4:53183215-53183234 None:intergenic 30.0%
!! ACTATTACCAGCTTTAGAAT+GGG + chr2_4:53183313-53183332 None:intergenic 30.0%
!!! TTGTTTTGGCAAAAACTGAA+TGG + chr2_4:53183377-53183396 None:intergenic 30.0%
GGATATTACACTAATAGAGT+GGG + chr2_4:53183435-53183454 None:intergenic 30.0%
TGCCAGAGGAATTAAATTTA+TGG - chr2_4:53183489-53183508 Msa0334620:intron 30.0%
AGACGTATTAAATACGCTTA+AGG - chr2_4:53183570-53183589 Msa0334620:intron 30.0%
TATTAAATACGCTTAAGGCA+AGG - chr2_4:53183575-53183594 Msa0334620:intron 30.0%
ATTAAATACGCTTAAGGCAA+GGG - chr2_4:53183576-53183595 Msa0334620:intron 30.0%
TTTGATGAATTATTGAGGTG+GGG + chr2_4:53183743-53183762 None:intergenic 30.0%
GATTTGATGAATTATTGAGG+TGG + chr2_4:53183745-53183764 None:intergenic 30.0%
ATCAAATCTTCTCCTAATCA+TGG - chr2_4:53183757-53183776 Msa0334620:intron 30.0%
CTTAAGCTTAAAAGATCATG+AGG + chr2_4:53183803-53183822 None:intergenic 30.0%
! CTCATGATCTTTTAAGCTTA+AGG - chr2_4:53183801-53183820 Msa0334620:intron 30.0%
! AAGAATGGATTCAAGAAGTT+AGG - chr2_4:53183862-53183881 Msa0334620:intron 30.0%
! AGAATGGATTCAAGAAGTTA+GGG - chr2_4:53183863-53183882 Msa0334620:intron 30.0%
AAAAGGATGACAAGTTTGAA+TGG - chr2_4:53183958-53183977 Msa0334620:intron 30.0%
ATTGCAAGAGAATCAAGTTA+GGG - chr2_4:53183992-53184011 Msa0334620:intron 30.0%
!! TCAATTGGATTTGAGGTTTT+TGG - chr2_4:53184255-53184274 Msa0334620:CDS 30.0%
!! CAATTGGATTTGAGGTTTTT+GGG - chr2_4:53184256-53184275 Msa0334620:CDS 30.0%
GTCAAAAACACCATTATTTC+AGG - chr2_4:53184278-53184297 Msa0334620:CDS 30.0%
TGAAGAAAAACTAGACCAAA+AGG + chr2_4:53184501-53184520 None:intergenic 30.0%
ACATTTAAAAACCTATGCCT+TGG + chr2_4:53184564-53184583 None:intergenic 30.0%
CAAATGATACACAATATGTC+CGG - chr2_4:53184637-53184656 Msa0334620:CDS 30.0%
AAATGATACACAATATGTCC+GGG - chr2_4:53184638-53184657 Msa0334620:CDS 30.0%
TTGTACATTCTTAATCATGG+TGG + chr2_4:53184832-53184851 None:intergenic 30.0%
GTAAACATGTATGCATGATT+AGG - chr2_4:53184893-53184912 Msa0334620:CDS 30.0%
!! TATTGAAGGTTGGTATGAAG+TGG + chr2_4:53181065-53181084 None:intergenic 35.0%
!! GTTTCTAAGGTATTGAAGGT+TGG + chr2_4:53181075-53181094 None:intergenic 35.0%
!!! ACAAATGAGACTTTTGAAGC+AGG - chr2_4:53181141-53181160 Msa0334620:CDS 35.0%
!! TTTCTATTTGCTATCCACAC+AGG + chr2_4:53181237-53181256 None:intergenic 35.0%
GCAAATAGAAATGTTCCACT+AGG - chr2_4:53181246-53181265 Msa0334620:intron 35.0%
ATTTCAAAGGGGCTATGATA+TGG - chr2_4:53181322-53181341 Msa0334620:intron 35.0%
CCACAAAATACTATCTGAGT+TGG + chr2_4:53181427-53181446 None:intergenic 35.0%
! CCAACTCAGATAGTATTTTG+TGG - chr2_4:53181424-53181443 Msa0334620:intron 35.0%
!! TTGGTTCTAATTCTCATACC+TGG + chr2_4:53181483-53181502 None:intergenic 35.0%
TATGAATACAAACCAGTAGC+AGG + chr2_4:53181558-53181577 None:intergenic 35.0%
! TTTAGAGTAGGTTCATGGAA+TGG - chr2_4:53181636-53181655 Msa0334620:intron 35.0%
ACTGAAGAGGAAGTTTCTTA+TGG - chr2_4:53181723-53181742 Msa0334620:intron 35.0%
TGGACAAATCCATTGTTTCA+AGG - chr2_4:53181757-53181776 Msa0334620:intron 35.0%
TAGCATGTACCTTGAAACAA+TGG + chr2_4:53181769-53181788 None:intergenic 35.0%
TGCGATAATTATGTTCTCTG+TGG - chr2_4:53181873-53181892 Msa0334620:intron 35.0%
TGCCAGATACATCAAAATCT+TGG - chr2_4:53182069-53182088 Msa0334620:intron 35.0%
CTTGAAGAATGTGAGAGATT+CGG - chr2_4:53182110-53182129 Msa0334620:intron 35.0%
AAGCTGCAACTCTTATGTAA+AGG + chr2_4:53182256-53182275 None:intergenic 35.0%
TTACATCAATGCCACATCAT+CGG + chr2_4:53182332-53182351 None:intergenic 35.0%
! GCATTGATGTAAAATCCACA+TGG - chr2_4:53182340-53182359 Msa0334620:intron 35.0%
GTTCATTAACTTCTGTGACA+TGG + chr2_4:53182385-53182404 None:intergenic 35.0%
TACTGATACTCACAATTTCG+AGG - chr2_4:53182472-53182491 Msa0334620:intron 35.0%
TTTGGTAAGCTAATTAGCAG+GGG + chr2_4:53182863-53182882 None:intergenic 35.0%
CTTTGGTAAGCTAATTAGCA+GGG + chr2_4:53182864-53182883 None:intergenic 35.0%
TCTTTGGTAAGCTAATTAGC+AGG + chr2_4:53182865-53182884 None:intergenic 35.0%
CATCAGGATGTTACAGAATT+TGG + chr2_4:53183216-53183235 None:intergenic 35.0%
! TAGATTTTCATCTGCACATC+AGG + chr2_4:53183232-53183251 None:intergenic 35.0%
GCTTGATGCTAAAAAAGTAG+TGG + chr2_4:53183256-53183275 None:intergenic 35.0%
TGGGTTCATCACTTACAATT+AGG + chr2_4:53183294-53183313 None:intergenic 35.0%
!! GACTATTACCAGCTTTAGAA+TGG + chr2_4:53183314-53183333 None:intergenic 35.0%
!! TGATACAGGCACTTTTGTTT+TGG + chr2_4:53183391-53183410 None:intergenic 35.0%
GTTTGTATAAGGGATGATAC+AGG + chr2_4:53183405-53183424 None:intergenic 35.0%
GGGAATAGGAGTTTGTATAA+GGG + chr2_4:53183415-53183434 None:intergenic 35.0%
TGGGAATAGGAGTTTGTATA+AGG + chr2_4:53183416-53183435 None:intergenic 35.0%
TACACTAATAGAGTGGGAAT+AGG + chr2_4:53183429-53183448 None:intergenic 35.0%
GGGATATTACACTAATAGAG+TGG + chr2_4:53183436-53183455 None:intergenic 35.0%
GATAATATACCGATACTGAC+AGG + chr2_4:53183460-53183479 None:intergenic 35.0%
TTCTTGAATCCATTCTTGAG+AGG + chr2_4:53183859-53183878 None:intergenic 35.0%
TCAAGAAGTTAGGGTTTGAT+TGG - chr2_4:53183872-53183891 Msa0334620:intron 35.0%
ATGACAAGTTTGAATGGCAT+GGG - chr2_4:53183964-53183983 Msa0334620:intron 35.0%
GATTGCAAGAGAATCAAGTT+AGG - chr2_4:53183991-53184010 Msa0334620:intron 35.0%
!! AAGTTAGGGTTTTGATGCTT+GGG - chr2_4:53184006-53184025 Msa0334620:intron 35.0%
! AATGTCTCAAGAAACTTGCT+AGG - chr2_4:53184043-53184062 Msa0334620:intron 35.0%
AAAAACATAATCCCAAGGGT+GGG + chr2_4:53184089-53184108 None:intergenic 35.0%
TAAAAACATAATCCCAAGGG+TGG + chr2_4:53184090-53184109 None:intergenic 35.0%
TATTCATAAGTGAGCAAGCA+TGG + chr2_4:53184174-53184193 None:intergenic 35.0%
GCTCACTTATGAATACTTGT+TGG - chr2_4:53184179-53184198 Msa0334620:CDS 35.0%
TTGTTGGAAAGATGTTCTAC+AGG - chr2_4:53184195-53184214 Msa0334620:CDS 35.0%
ATTAGAGTCATGCTATGCTT+TGG - chr2_4:53184231-53184250 Msa0334620:CDS 35.0%
TTAGAGTCATGCTATGCTTT+GGG - chr2_4:53184232-53184251 Msa0334620:CDS 35.0%
! AAACACCATTATTTCAGGTC+TGG - chr2_4:53184283-53184302 Msa0334620:CDS 35.0%
CTTACTTAATTCATGCTACC+CGG + chr2_4:53184659-53184678 None:intergenic 35.0%
GGGTAGCATGAATTAAGTAA+GGG - chr2_4:53184658-53184677 Msa0334620:CDS 35.0%
TCATGCATACATGTTTACCT+CGG + chr2_4:53184891-53184910 None:intergenic 35.0%
!! CATGGCCTTGTTGTTAATTT+AGG + chr2_4:53184924-53184943 None:intergenic 35.0%
CTAAGATTATAACCGCATGT+CGG - chr2_4:53185059-53185078 Msa0334620:CDS 35.0%
ACCTTAGAAACCATTGTTCC+AGG - chr2_4:53181084-53181103 Msa0334620:CDS 40.0%
TCCTGGAACAATGGTTTCTA+AGG + chr2_4:53181088-53181107 None:intergenic 40.0%
TTATGTTGGAGAGATTGTCC+TGG + chr2_4:53181105-53181124 None:intergenic 40.0%
GAAGCAGGTTTCTTCAACTT+TGG - chr2_4:53181156-53181175 Msa0334620:CDS 40.0%
TTACACCAAAAACTCCTGTG+TGG - chr2_4:53181220-53181239 Msa0334620:CDS 40.0%
GTTCCACTAGGAAACTTATC+AGG - chr2_4:53181258-53181277 Msa0334620:intron 40.0%
ACTCCTGATAAGTTTCCTAG+TGG + chr2_4:53181264-53181283 None:intergenic 40.0%
GAAACCGATTGTGAAACTCT+TGG - chr2_4:53181371-53181390 Msa0334620:intron 40.0%
TGGTCTCATCTTTCACAACA+AGG + chr2_4:53181407-53181426 None:intergenic 40.0%
! CCTGGAATCAAAGTATCACT+AGG + chr2_4:53181465-53181484 None:intergenic 40.0%
CCTAGTGATACTTTGATTCC+AGG - chr2_4:53181462-53181481 Msa0334620:intron 40.0%
AGGTACATGCTAACTCCAAT+CGG - chr2_4:53181777-53181796 Msa0334620:intron 40.0%
TTGCCAACTCTTTGTCTGAT+CGG + chr2_4:53181826-53181845 None:intergenic 40.0%
AGTTGGCAACTTGTCTTTGT+TGG - chr2_4:53181837-53181856 Msa0334620:intron 40.0%
ACTTGTCTTTGTTGGTCCTT+CGG - chr2_4:53181845-53181864 Msa0334620:intron 40.0%
! TAATTATCGCACTGATCCGA+AGG + chr2_4:53181864-53181883 None:intergenic 40.0%
GTGGAATTCGCAAATTTGGT+CGG - chr2_4:53181974-53181993 Msa0334620:CDS 40.0%
AATTCGCAAATTTGGTCGGA+TGG - chr2_4:53181978-53181997 Msa0334620:CDS 40.0%
CGAATCTCTCACATTCTTCA+AGG + chr2_4:53182112-53182131 None:intergenic 40.0%
! GAATGTGAGAGATTCGGTAT+TGG - chr2_4:53182116-53182135 Msa0334620:intron 40.0%
GATGTCAGAAAATTACCCTC+TGG - chr2_4:53182221-53182240 Msa0334620:intron 40.0%
AGAGTTGCAGCTTCAGAATT+AGG - chr2_4:53182263-53182282 Msa0334620:intron 40.0%
ATTCCGAATTTCCGATGATG+TGG - chr2_4:53182318-53182337 Msa0334620:intron 40.0%
ATGCCACATCATCGGAAATT+CGG + chr2_4:53182324-53182343 None:intergenic 40.0%
GAAAGTAAAACAAAGTGGGG+CGG - chr2_4:53182833-53182852 Msa0334620:intron 40.0%
TTGGTAAGCTAATTAGCAGG+GGG + chr2_4:53182862-53182881 None:intergenic 40.0%
AGTTAGGATGCTGAATTGCT+AGG - chr2_4:53182972-53182991 Msa0334620:intron 40.0%
TGTGAAGAGACAAGCAAATG+AGG + chr2_4:53183130-53183149 None:intergenic 40.0%
GCATCAAGCTCAAAATCGAT+AGG - chr2_4:53183267-53183286 Msa0334620:intron 40.0%
!! TGATGAACCCATTCTAAAGC+TGG - chr2_4:53183303-53183322 Msa0334620:intron 40.0%
AATATACCGATACTGACAGG+CGG + chr2_4:53183457-53183476 None:intergenic 40.0%
TCCTTTGTGTTTCTCTCTCT+AGG - chr2_4:53183661-53183680 Msa0334620:intron 40.0%
ACCTAGAGAGAGAAACACAA+AGG + chr2_4:53183665-53183684 None:intergenic 40.0%
! GTGTTTCTCTCTCTAGGTTT+TGG - chr2_4:53183667-53183686 Msa0334620:intron 40.0%
ACTAGAAGCTTGCCATGATT+AGG + chr2_4:53183772-53183791 None:intergenic 40.0%
TCTTCTTCTCCTCTCAAGAA+TGG - chr2_4:53183847-53183866 Msa0334620:intron 40.0%
!! GTTTGATTGGTGTTGAGTGA+GGG - chr2_4:53183885-53183904 Msa0334620:intron 40.0%
!!! GCATGGTTTTGAGCTTGATA+AGG - chr2_4:53183919-53183938 Msa0334620:intron 40.0%
! TTGAGCTTGATAAGGTGTCA+TGG - chr2_4:53183927-53183946 Msa0334620:intron 40.0%
! GTGTCATGGTTTGCAAGAAA+AGG - chr2_4:53183941-53183960 Msa0334620:intron 40.0%
GATGACAAGTTTGAATGGCA+TGG - chr2_4:53183963-53183982 Msa0334620:intron 40.0%
!! CAAGTTAGGGTTTTGATGCT+TGG - chr2_4:53184005-53184024 Msa0334620:intron 40.0%
AAGGGTGGGAAAACTATCTA+TGG + chr2_4:53184075-53184094 None:intergenic 40.0%
! ATAGATAGTTTTCCCACCCT+TGG - chr2_4:53184074-53184093 Msa0334620:intron 40.0%
! TAGATAGTTTTCCCACCCTT+GGG - chr2_4:53184075-53184094 Msa0334620:intron 40.0%
GAGCAAGCATGGCATAAATT+GGG + chr2_4:53184163-53184182 None:intergenic 40.0%
TGAGCAAGCATGGCATAAAT+TGG + chr2_4:53184164-53184183 None:intergenic 40.0%
! ATGCTATGCTTTGGGTCAAT+TGG - chr2_4:53184240-53184259 Msa0334620:CDS 40.0%
CTTTGGGTCAATTGGATTTG+AGG - chr2_4:53184248-53184267 Msa0334620:CDS 40.0%
ACAGTCCAGACCTGAAATAA+TGG + chr2_4:53184291-53184310 None:intergenic 40.0%
!! AGACCAAAAGGCGTCAAAAA+GGG + chr2_4:53184489-53184508 None:intergenic 40.0%
!! TAGACCAAAAGGCGTCAAAA+AGG + chr2_4:53184490-53184509 None:intergenic 40.0%
CGGGTAGCATGAATTAAGTA+AGG - chr2_4:53184657-53184676 Msa0334620:CDS 40.0%
CATAGTAAGCAAGTAAGCTG+TGG - chr2_4:53184787-53184806 Msa0334620:CDS 40.0%
ACCATTAATCGGATCGATCA+AGG - chr2_4:53184863-53184882 Msa0334620:CDS 40.0%
ACCTTGATCGATCCGATTAA+TGG + chr2_4:53184867-53184886 None:intergenic 40.0%
AGGCCATGACAAGTATAAGT+AGG - chr2_4:53184936-53184955 Msa0334620:CDS 40.0%
CCACCTACTTATACTTGTCA+TGG + chr2_4:53184942-53184961 None:intergenic 40.0%
CCATGACAAGTATAAGTAGG+TGG - chr2_4:53184939-53184958 Msa0334620:CDS 40.0%
TACAAGGGGTTCTCATTATG+AGG - chr2_4:53184991-53185010 Msa0334620:CDS 40.0%
GAGAGATTGTCCTGGAACAA+TGG + chr2_4:53181097-53181116 None:intergenic 45.0%
! GCTATCCACACAGGAGTTTT+TGG + chr2_4:53181228-53181247 None:intergenic 45.0%
TAACGCGATACTTGACCGAT+TGG + chr2_4:53181795-53181814 None:intergenic 45.0%
TGTCCGATCAGACAAAGAGT+TGG - chr2_4:53181820-53181839 Msa0334620:intron 45.0%
TTTGGTCGGATGGTTGTGTT+AGG - chr2_4:53181988-53182007 Msa0334620:CDS 45.0%
!! GATATCAGAGATGGTGGAAG+TGG - chr2_4:53182170-53182189 Msa0334620:intron 45.0%
GTCAGAAAATTACCCTCTGG+AGG - chr2_4:53182224-53182243 Msa0334620:intron 45.0%
! TAAAGGTCTTGTCCTCCAGA+GGG + chr2_4:53182239-53182258 None:intergenic 45.0%
AACATGCACGGATGGATCTT+TGG + chr2_4:53182881-53182900 None:intergenic 45.0%
TGATATGGAACATGCACGGA+TGG + chr2_4:53182889-53182908 None:intergenic 45.0%
CTGGAAACTAGCTGAAGATG+TGG - chr2_4:53183080-53183099 Msa0334620:intron 45.0%
TGGCCACCTTAGCTAATCTA+TGG - chr2_4:53183100-53183119 Msa0334620:intron 45.0%
GGCCACCTTAGCTAATCTAT+GGG - chr2_4:53183101-53183120 Msa0334620:intron 45.0%
! AGCCCATAGATTAGCTAAGG+TGG + chr2_4:53183106-53183125 None:intergenic 45.0%
ATGGTTTACTCCAGTCTGTG+AGG + chr2_4:53183358-53183377 None:intergenic 45.0%
AATATCCCGCCTGTCAGTAT+CGG - chr2_4:53183448-53183467 Msa0334620:intron 45.0%
ATATACCGATACTGACAGGC+GGG + chr2_4:53183456-53183475 None:intergenic 45.0%
AATTCCTCTGGCACGATCAA+CGG + chr2_4:53183482-53183501 None:intergenic 45.0%
GATCGATGGTAGAAGAGAGA+AGG + chr2_4:53183708-53183727 None:intergenic 45.0%
!! GGTTTGATTGGTGTTGAGTG+AGG - chr2_4:53183884-53183903 Msa0334620:intron 45.0%
TGTTGAGTGAGGGTGATGTT+TGG - chr2_4:53183895-53183914 Msa0334620:intron 45.0%
!! AGGGTTTTGATGCTTGGGAT+TGG - chr2_4:53184011-53184030 Msa0334620:intron 45.0%
TGGACTGTCATAACTCGCAA+CGG - chr2_4:53184303-53184322 Msa0334620:CDS 45.0%
AATCTCAGTGGCGAGTAACA+GGG - chr2_4:53184435-53184454 Msa0334620:CDS 45.0%
AAGTCATGACTCCAAGGCAT+AGG - chr2_4:53184550-53184569 Msa0334620:CDS 45.0%
GTTCTCGACAAACTATGTCG+AGG + chr2_4:53184697-53184716 None:intergenic 45.0%
CTTCGCGTCTTATCACTCTA+GGG + chr2_4:53184737-53184756 None:intergenic 45.0%
ACTTCGCGTCTTATCACTCT+AGG + chr2_4:53184738-53184757 None:intergenic 45.0%
! TGTCTCTTGCTATCCACTTC+AGG - chr2_4:53184964-53184983 Msa0334620:CDS 45.0%
! GTCTCTTGCTATCCACTTCA+GGG - chr2_4:53184965-53184984 Msa0334620:CDS 45.0%
! TCTCTTGCTATCCACTTCAG+GGG - chr2_4:53184966-53184985 Msa0334620:CDS 45.0%
! TTGCATTTTCGGTGACATGC+GGG + chr2_4:53185037-53185056 None:intergenic 45.0%
! CTTGCATTTTCGGTGACATG+CGG + chr2_4:53185038-53185057 None:intergenic 45.0%
! TGTCTCTTGTTATCCACGTC+AGG - chr2_4:53185088-53185107 Msa0334620:CDS 45.0%
! GTCTCTTGTTATCCACGTCA+GGG - chr2_4:53185089-53185108 Msa0334620:CDS 45.0%
! TCTCTTGTTATCCACGTCAG+GGG - chr2_4:53185090-53185109 Msa0334620:CDS 45.0%
CATGACCGATGTACGTACAT+CGG + chr2_4:53185185-53185204 None:intergenic 45.0%
TGTACGTACATCGGTCATGA+TGG - chr2_4:53185186-53185205 Msa0334620:CDS 45.0%
GTACGTACATCGGTCATGAT+GGG - chr2_4:53185187-53185206 Msa0334620:CDS 45.0%
! GGTCATGATGGGATTGTTCT+CGG - chr2_4:53185198-53185217 Msa0334620:CDS 45.0%
! GTCATGATGGGATTGTTCTC+GGG - chr2_4:53185199-53185218 Msa0334620:CDS 45.0%
! TCATGATGGGATTGTTCTCG+GGG - chr2_4:53185200-53185219 Msa0334620:CDS 45.0%
! TTCATTTTACGGAGAGCCTC+GGG + chr2_4:53185234-53185253 None:intergenic 45.0%
! GTTCATTTTACGGAGAGCCT+CGG + chr2_4:53185235-53185254 None:intergenic 45.0%
! GTAAAGGTCTTGTCCTCCAG+AGG + chr2_4:53182240-53182259 None:intergenic 50.0%
! GGCAGCCCATAGATTAGCTA+AGG + chr2_4:53183109-53183128 None:intergenic 50.0%
GTACATGTCGACGAAGCTCT+TGG + chr2_4:53183336-53183355 None:intergenic 50.0%
TCGACATGTACCTCACAGAC+TGG - chr2_4:53183345-53183364 Msa0334620:intron 50.0%
TTATCCGTTGATCGTGCCAG+AGG - chr2_4:53183475-53183494 Msa0334620:intron 50.0%
!!! CGCTTAAGGCAAGGGCATTT+TGG - chr2_4:53183584-53183603 Msa0334620:intron 50.0%
GGAGAGAAGAGAGAGATCGA+TGG + chr2_4:53183722-53183741 None:intergenic 50.0%
! TGAGGGTGATGTTTGGAGCA+TGG - chr2_4:53183902-53183921 Msa0334620:intron 50.0%
GATGCTTGGGATTGGAAGCT+TGG - chr2_4:53184019-53184038 Msa0334620:intron 50.0%
GTGGCGAGTAACAATCTCAG+TGG - chr2_4:53184423-53184442 Msa0334620:CDS 50.0%
CAATCTCAGTGGCGAGTAAC+AGG - chr2_4:53184434-53184453 Msa0334620:CDS 50.0%
! AGGCCCTTTTTGACGCCTTT+TGG - chr2_4:53184483-53184502 Msa0334620:CDS 50.0%
CCTTGGAGTCATGACTTGAG+GGG + chr2_4:53184547-53184566 None:intergenic 50.0%
GCCTTGGAGTCATGACTTGA+GGG + chr2_4:53184548-53184567 None:intergenic 50.0%
TGCCTTGGAGTCATGACTTG+AGG + chr2_4:53184549-53184568 None:intergenic 50.0%
! CTCTTGCTATCCACTTCAGG+GGG - chr2_4:53184967-53184986 Msa0334620:CDS 50.0%
ATCCACTTCAGGGGGATACA+AGG - chr2_4:53184975-53184994 Msa0334620:CDS 50.0%
TCCACTTCAGGGGGATACAA+GGG - chr2_4:53184976-53184995 Msa0334620:CDS 50.0%
TGAGGACGATTCAAGCCGTA+AGG - chr2_4:53185009-53185028 Msa0334620:CDS 50.0%
GAGGACGATTCAAGCCGTAA+GGG - chr2_4:53185010-53185029 Msa0334620:CDS 50.0%
! CTCTTGTTATCCACGTCAGG+GGG - chr2_4:53185091-53185110 Msa0334620:CDS 50.0%
TTATCCACGTCAGGGGGATA+CGG - chr2_4:53185097-53185116 Msa0334620:CDS 50.0%
GGAGTCCGATGTACGTACAT+CGG - chr2_4:53185177-53185196 Msa0334620:CDS 50.0%
GACACGCAAGATCCTGCTAC+TGG - chr2_4:53181543-53181562 Msa0334620:intron 55.0%
GTGGAAGTGGCTGCTTGCTT+TGG - chr2_4:53182183-53182202 Msa0334620:intron 55.0%
GGCGAGTAGAATTGCTCGCT+AGG - chr2_4:53184324-53184343 Msa0334620:CDS 55.0%
TAGGCGAGCTGGAAACAGCA+AGG - chr2_4:53184343-53184362 Msa0334620:CDS 55.0%
AGGCGAGCTGGAAACAGCAA+GGG - chr2_4:53184344-53184363 Msa0334620:CDS 55.0%
!! TGCGAGTTGGTTGCGAGTTG+GGG + chr2_4:53184382-53184401 None:intergenic 55.0%
!! CTGCGAGTTGGTTGCGAGTT+GGG + chr2_4:53184383-53184402 None:intergenic 55.0%
!! ACTGCGAGTTGGTTGCGAGT+TGG + chr2_4:53184384-53184403 None:intergenic 55.0%
AACTCGCAACCAACTCGCAG+TGG - chr2_4:53184383-53184402 Msa0334620:CDS 55.0%
CATTACTCGCCACTGCGAGT+TGG + chr2_4:53184395-53184414 None:intergenic 55.0%
GGCGAGTAATGTACTCGCAG+TGG - chr2_4:53184404-53184423 Msa0334620:CDS 55.0%
CCCCTCAAGTCATGACTCCA+AGG - chr2_4:53184544-53184563 Msa0334620:CDS 55.0%
TCGGATCGATCAAGGTTCCG+AGG - chr2_4:53184871-53184890 Msa0334620:CDS 55.0%
CCACTTCAGGGGGATACAAG+GGG - chr2_4:53184977-53184996 Msa0334620:CDS 55.0%
TATCCACGTCAGGGGGATAC+GGG - chr2_4:53185098-53185117 Msa0334620:CDS 55.0%
TACGGGAGGTTCTCGACTCA+AGG - chr2_4:53185115-53185134 Msa0334620:CDS 55.0%
ACGGGAGGTTCTCGACTCAA+GGG - chr2_4:53185116-53185135 Msa0334620:CDS 55.0%
GGTTCTCGACTCAAGGGGAA+TGG - chr2_4:53185122-53185141 Msa0334620:CDS 55.0%
GGGAATGGTTCAAGCCGCAA+GGG - chr2_4:53185137-53185156 Msa0334620:CDS 55.0%
GTACGTACATCGGACTCCCT+CGG + chr2_4:53185175-53185194 None:intergenic 55.0%
! ATTTTACGGAGAGCCTCGGG+TGG + chr2_4:53185231-53185250 None:intergenic 55.0%
GAATTGCTCGCTAGGCGAGC+TGG - chr2_4:53184332-53184351 Msa0334620:CDS 60.0%
GGCGAGCTGGAAACAGCAAG+GGG - chr2_4:53184345-53184364 Msa0334620:CDS 60.0%
GCGAGCTGGAAACAGCAAGG+GGG - chr2_4:53184346-53184365 Msa0334620:CDS 60.0%
!! GCGAGTTGGTTGCGAGTTGG+GGG + chr2_4:53184381-53184400 None:intergenic 60.0%
GCACCCTGTTCGCTCGTTTC+AGG - chr2_4:53184463-53184482 Msa0334620:CDS 60.0%
GGGCCTGAAACGAGCGAACA+GGG + chr2_4:53184469-53184488 None:intergenic 60.0%
AGGGCCTGAAACGAGCGAAC+AGG + chr2_4:53184470-53184489 None:intergenic 60.0%
CCCCTTGTATCCCCCTGAAG+TGG + chr2_4:53184980-53184999 None:intergenic 60.0%
GGTGACATGCGGGTCCCTTA+CGG + chr2_4:53185027-53185046 None:intergenic 60.0%
!! GAGACACGAGCACCGACATG+CGG + chr2_4:53185074-53185093 None:intergenic 60.0%
CGGGAGGTTCTCGACTCAAG+GGG - chr2_4:53185117-53185136 Msa0334620:CDS 60.0%
GGGGAATGGTTCAAGCCGCA+AGG - chr2_4:53185136-53185155 Msa0334620:CDS 60.0%
TCTCGGGGTTACTCCACCCG+AGG - chr2_4:53185215-53185234 Msa0334620:CDS 65.0%
CCTCCCGTATCCCCCTGACG+TGG + chr2_4:53185104-53185123 None:intergenic 70.0%
CCACGTCAGGGGGATACGGG+AGG - chr2_4:53185101-53185120 Msa0334620:CDS 70.0%
! GGTGTCGTGCGGGTCCCTTG+CGG + chr2_4:53185154-53185173 None:intergenic 70.0%
AAGGGACCCGCACGACACCG+AGG - chr2_4:53185155-53185174 Msa0334620:CDS 70.0%
AGGGACCCGCACGACACCGA+GGG - chr2_4:53185156-53185175 Msa0334620:CDS 70.0%
!! GGACTCCCTCGGTGTCGTGC+GGG + chr2_4:53185164-53185183 None:intergenic 70.0%
!! CGGACTCCCTCGGTGTCGTG+CGG + chr2_4:53185165-53185184 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 53181021 53185341 53181021 ID=Msa0334620;Name=Msa0334620
chr2_4 mRNA 53181021 53185341 53181021 ID=Msa0334620-mRNA-1;Parent=Msa0334620;Name=Msa0334620-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|0.33|1|1|3|0|534
chr2_4 exon 53184078 53185341 53184078 ID=Msa0334620-mRNA-1:exon:16092;Parent=Msa0334620-mRNA-1
chr2_4 exon 53181954 53182062 53181954 ID=Msa0334620-mRNA-1:exon:16091;Parent=Msa0334620-mRNA-1
chr2_4 exon 53181021 53181252 53181021 ID=Msa0334620-mRNA-1:exon:16090;Parent=Msa0334620-mRNA-1
chr2_4 CDS 53184078 53185341 53184078 ID=Msa0334620-mRNA-1:cds;Parent=Msa0334620-mRNA-1
chr2_4 CDS 53181954 53182062 53181954 ID=Msa0334620-mRNA-1:cds;Parent=Msa0334620-mRNA-1
chr2_4 CDS 53181021 53181252 53181021 ID=Msa0334620-mRNA-1:cds;Parent=Msa0334620-mRNA-1
Gene Sequence

>Msa0334620

ATGGAAAGCTTCAAGGTGCTAGTTTATTGCTTTCTAGTCTTCCACTTCATACCAACCTTCAATACCTTAGAAACCATTGTTCCAGGACAATCTCTCCAACATAATGAGACTTTAATCTCAACAAATGAGACTTTTGAAGCAGGTTTCTTCAACTTTGGAGATTCAAATATTCAATATTTTGGTATATGGTACAAAGACATTACACCAAAAACTCCTGTGTGGATAGCAAATAGAAATGTTCCACTAGGAAACTTATCAGGAGTTTTGAATCTTACAAATAAAGGAACTCTTGCTATTGTTGATTTCAAAGGGGCTATGATATGGTCCTCTAATACATCAAAAACAGTAACGAAACCGATTGTGAAACTCTTGGAAAATGGAAACCTTGTTGTGAAAGATGAGACCAACTCAGATAGTATTTTGTGGCAAAGTTTCGATCTTCCTAGTGATACTTTGATTCCAGGTATGAGAATTAGAACCAACTTAGTAAATGGTAATTATACAGGTTTGGTATCTTGGCGAGACACGCAAGATCCTGCTACTGGTTTGTATTCATATCATATAGATACTAATGGTTATCCTCAAGTAGTGATTAAAAAAGGAAACACATTATTATTTAGAGTAGGTTCATGGAATGGAAATATTTTATCTGGAATCTCTTCTGAAACGCTTTACAAATCCTTCAATTTTACATTTGTGATTACTGAAGAGGAAGTTTCTTATGGATATGAACTTTTGGACAAATCCATTGTTTCAAGGTACATGCTAACTCCAATCGGTCAAGTATCGCGTTACATGTTGTCCGATCAGACAAAGAGTTGGCAACTTGTCTTTGTTGGTCCTTCGGATCAGTGCGATAATTATGTTCTCTGTGGTGCAAATTCTAATTGTGATATTGATAATTCTCCAATATGTGAATGTCTTAAAGGTTTCATTCCAAAATCTCAAGAAAAGTGGAATTCGCAAATTTGGTCGGATGGTTGTGTTAGGAGAGTTAAGTTAGATTGTGACAATAATGATAGATTTTCGAAACTTATGGGAATGAAGTTGCCAGATACATCAAAATCTTGGTTTAATAAGAGCATGAACCTTGAAGAATGTGAGAGATTCGGTATTGGAAACTGTTCTTGTACAGCATATGCAAATTTAGATATCAGAGATGGTGGAAGTGGCTGCTTGCTTTGGTTTAATAACATTTTGGATGTCAGAAAATTACCCTCTGGAGGACAAGACCTTTACATAAGAGTTGCAGCTTCAGAATTAGGTCTGGACTGTCATAACTCGCAACGGCGAGTAGAATTGCTCGCTAGGCGAGCTGGAAACAGCAAGGGGGTGTTGCTCACCCCCAACTCGCAACCAACTCGCAGTGGCGAGGGGATACGGGAGGTTCTCGACTCAAGGGGAATGGTTCAAGCCGCAAGGGACCCGCACGACACCGAGGGAGTCCGATGTACGTACATCGGTCATGATGGGATTGTTCTCGGGGTTACTCCACCCGAGGCTCTCCGTAAAATGAACCAAGATAATAATTGTTTGTTCAACGCTAACATAACAATGAATGAACTTATGCACGATTATGTAGCTTATGTTATGATTATGTTATGA
Protein sequence

>Msa0334620

MESFKVLVYCFLVFHFIPTFNTLETIVPGQSLQHNETLISTNETFEAGFFNFGDSNIQYFGIWYKDITPKTPVWIANRNVPLGNLSGVLNLTNKGTLAIVDFKGAMIWSSNTSKTVTKPIVKLLENGNLVVKDETNSDSILWQSFDLPSDTLIPGMRIRTNLVNGNYTGLVSWRDTQDPATGLYSYHIDTNGYPQVVIKKGNTLLFRVGSWNGNILSGISSETLYKSFNFTFVITEEEVSYGYELLDKSIVSRYMLTPIGQVSRYMLSDQTKSWQLVFVGPSDQCDNYVLCGANSNCDIDNSPICECLKGFIPKSQEKWNSQIWSDGCVRRVKLDCDNNDRFSKLMGMKLPDTSKSWFNKSMNLEECERFGIGNCSCTAYANLDIRDGGSGCLLWFNNILDVRKLPSGGQDLYIRVAASELGLDCHNSQRRVELLARRAGNSKGVLLTPNSQPTRSGEGIREVLDSRGMVQAARDPHDTEGVRCTYIGHDGIVLGVTPPEALRKMNQDNNCLFNANITMNELMHDYVAYVMIML*