Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339290 | XP_003597309.2 | 93.313 | 658 | 19 | 3 | 1 | 633 | 1 | 658 | 0.0 | 1211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339290 | sp|Q52JK6|VIP2_NICBE | 71.570 | 605 | 140 | 9 | 59 | 633 | 1 | 603 | 0.0 | 750 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0339290 | Msa0925270 | 0.800738 | 1.252145e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339290 | MtrunA17_Chr2g0327701 | 90.236 | 594 | 25 | 4 | 50 | 633 | 1 | 571 | 0.0 | 970 |
| Msa0339290 | MtrunA17_Chr4g0030451 | 70.739 | 663 | 159 | 11 | 1 | 633 | 1 | 658 | 0.0 | 818 |
| Msa0339290 | MtrunA17_Chr2g0327681 | 100.000 | 42 | 0 | 0 | 1 | 42 | 1 | 42 | 8.59e-20 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339290 | AT1G07705.2 | 64.407 | 649 | 175 | 14 | 1 | 632 | 1 | 610 | 0.0 | 731 |
| Msa0339290 | AT5G59710.2 | 61.644 | 657 | 176 | 17 | 5 | 632 | 4 | 613 | 0.0 | 673 |
| Msa0339290 | AT5G59710.1 | 61.644 | 657 | 176 | 17 | 5 | 632 | 4 | 613 | 0.0 | 673 |
| Msa0339290 | AT1G07705.1 | 65.432 | 567 | 146 | 12 | 1 | 554 | 1 | 530 | 0.0 | 624 |
| Msa0339290 | AT5G59710.3 | 63.304 | 575 | 141 | 15 | 5 | 554 | 4 | 533 | 0.0 | 580 |
Find 212 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCATTAAGTTGTTCTTTC+TGG | 0.035131 | 2_4:-60375401 | None:intergenic |
| GTGATTCTCCGTTGCGAATT+AGG | 0.133643 | 2_4:+60371891 | Msa0339290:five_prime_UTR |
| AATTCTCCAAATACTGTTTC+TGG | 0.167736 | 2_4:+60375951 | Msa0339290:CDS |
| ACACCAGTGTGCTGATAAAT+TGG | 0.188660 | 2_4:-60373200 | None:intergenic |
| GCTTCACGTCTAAATTTAAA+TGG | 0.188768 | 2_4:+60373900 | Msa0339290:CDS |
| GGGTGACACTAATTTAAAAT+TGG | 0.192822 | 2_4:-60371718 | None:intergenic |
| GAAAATCTTCACAAGACTTT+TGG | 0.198132 | 2_4:+60376230 | Msa0339290:CDS |
| TGATTCTCCGTTGCGAATTA+GGG | 0.217227 | 2_4:+60371892 | Msa0339290:five_prime_UTR |
| AGGTCTGCTGGTTTCAGTTT+GGG | 0.222410 | 2_4:+60375575 | Msa0339290:CDS |
| ACACTAATGCTTATATAAAA+TGG | 0.230298 | 2_4:-60377285 | None:intergenic |
| AGGAGACAAGATGAGAAATT+AGG | 0.232425 | 2_4:-60371739 | None:intergenic |
| TTGGGTTATTGCTTTGTTCC+TGG | 0.262004 | 2_4:-60371699 | None:intergenic |
| TTCAGGCTCTTTACGAAAAC+AGG | 0.265173 | 2_4:+60374731 | Msa0339290:intron |
| GATTTACAGCTGACATTTGC+TGG | 0.269503 | 2_4:-60376040 | None:intergenic |
| ACATTTGCTGGAGGCGAAAC+TGG | 0.272892 | 2_4:-60376028 | None:intergenic |
| AGTACATCACTTGAATTCTA+TGG | 0.279511 | 2_4:+60374525 | Msa0339290:CDS |
| TCCTCGGATAACAAGTTCTA+TGG | 0.279584 | 2_4:+60373812 | Msa0339290:CDS |
| GGTGGTTTCCGACGAGTTTC+CGG | 0.281482 | 2_4:-60371832 | None:intergenic |
| CAGCTGTAAATCAGTCCTTT+AGG | 0.284889 | 2_4:+60376051 | Msa0339290:CDS |
| TCTGGAGGATTGTCCATTCC+TGG | 0.287243 | 2_4:+60373873 | Msa0339290:CDS |
| GAGGTCTGCTGGTTTCAGTT+TGG | 0.299623 | 2_4:+60375574 | Msa0339290:CDS |
| CTGCAGATGGGGAGGTCTGC+TGG | 0.305802 | 2_4:+60375563 | Msa0339290:intron |
| GGAGTTGCTGGTTCTATTCC+TGG | 0.314697 | 2_4:+60373708 | Msa0339290:CDS |
| GACCTCCTGGCATTGGATTA+AGG | 0.320047 | 2_4:+60375922 | Msa0339290:CDS |
| CCTGATCCATTTGGTCTGCT+TGG | 0.327445 | 2_4:+60376113 | Msa0339290:CDS |
| AATATGATACAATTCACATT+TGG | 0.327503 | 2_4:-60377396 | None:intergenic |
| GGAAGCTCTCATGGACATTC+AGG | 0.340474 | 2_4:+60373624 | Msa0339290:CDS |
| ATGAAGATCTTGATTGTTCA+TGG | 0.343740 | 2_4:-60375672 | None:intergenic |
| GGAGACAAGATGAGAAATTA+GGG | 0.347405 | 2_4:-60371738 | None:intergenic |
| TGGGTTATTGCTTTGTTCCT+GGG | 0.369837 | 2_4:-60371698 | None:intergenic |
| GGCGAAACTGGGATTGGTTC+TGG | 0.370997 | 2_4:-60376016 | None:intergenic |
| CCCGTACCAGAAACAGTATT+TGG | 0.373729 | 2_4:-60375957 | None:intergenic |
| TCTATGGGAAACATGGTTGC+TGG | 0.374454 | 2_4:+60373828 | Msa0339290:CDS |
| AGAGGAGGTATAAGTGTTGT+AGG | 0.376611 | 2_4:+60373657 | Msa0339290:CDS |
| ACAAGTCGTCCTAGTTCTGC+TGG | 0.377291 | 2_4:+60374613 | Msa0339290:CDS |
| CTTCCATCTTCTGCTGCAAT+TGG | 0.380944 | 2_4:+60373735 | Msa0339290:CDS |
| GGTGACACTAATTTAAAATT+GGG | 0.381032 | 2_4:-60371717 | None:intergenic |
| ACAGTATTTGGAGAATTTAG+AGG | 0.382920 | 2_4:-60375945 | None:intergenic |
| TCTGGTGTTGTTGATACTGC+TGG | 0.384992 | 2_4:-60375998 | None:intergenic |
| TTTGCTGCAGGTGGTATTCA+GGG | 0.392167 | 2_4:+60373286 | Msa0339290:intron |
| CAATCTGCTCCTGATCCATT+TGG | 0.393312 | 2_4:+60376104 | Msa0339290:CDS |
| TTTGTATGCAGGTTGTTGAT+TGG | 0.398062 | 2_4:+60372051 | Msa0339290:intron |
| AAAAGATTACCAACAAACTA+TGG | 0.403752 | 2_4:+60376866 | Msa0339290:intron |
| ATATGATACAATTCACATTT+GGG | 0.404170 | 2_4:-60377395 | None:intergenic |
| GGGTTAGTGCGGTGGTGAAA+AGG | 0.408501 | 2_4:-60371759 | None:intergenic |
| AATAACACAAATGGAGTTGC+TGG | 0.413578 | 2_4:+60373696 | Msa0339290:CDS |
| ATACACAGTACCTTTGTATC+CGG | 0.414552 | 2_4:-60374820 | None:intergenic |
| AGCTGTAAATCAGTCCTTTA+GGG | 0.416596 | 2_4:+60376052 | Msa0339290:CDS |
| TTGACAAGCGGCTCCATGTT+GGG | 0.416934 | 2_4:-60376957 | None:intergenic |
| CACCAGTGTGCTGATAAATT+GGG | 0.417346 | 2_4:-60373199 | None:intergenic |
| GATCTGACATCTCTTGCTCT+TGG | 0.425564 | 2_4:+60376167 | Msa0339290:CDS |
| TTAAATGGAAACAGCGGATC+TGG | 0.427099 | 2_4:+60373915 | Msa0339290:CDS |
| TCAAATCTTCCAGACGGTGC+TGG | 0.427253 | 2_4:+60373134 | Msa0339290:CDS |
| TCCAAATACTGTTTCTGGTA+CGG | 0.434596 | 2_4:+60375956 | Msa0339290:CDS |
| GAGAAACAACCATAGTTTGT+TGG | 0.439920 | 2_4:-60376875 | None:intergenic |
| AGTGATGTACTGCTTGCATA+TGG | 0.441539 | 2_4:-60374513 | None:intergenic |
| AAAGTCCGCCCAGCACCGTC+TGG | 0.445363 | 2_4:-60373143 | None:intergenic |
| CTATCTCATGGAAGCTCTCA+TGG | 0.446529 | 2_4:+60373615 | Msa0339290:CDS |
| GTTGAAATTCATGCAATGTC+CGG | 0.447539 | 2_4:+60372132 | Msa0339290:exon |
| GTTTCTTGATGTAAGTGTAC+TGG | 0.448726 | 2_4:-60373350 | None:intergenic |
| CCAAATACTGTTTCTGGTAC+GGG | 0.454336 | 2_4:+60375957 | Msa0339290:CDS |
| AATCAGTCCTTTAGGGATCA+TGG | 0.457898 | 2_4:+60376059 | Msa0339290:CDS |
| TTGTCGGAGACTCGTAGGCT+AGG | 0.458798 | 2_4:+60371863 | Msa0339290:five_prime_UTR |
| ATAAGTGTTGTAGGAAATCC+TGG | 0.461183 | 2_4:+60373666 | Msa0339290:CDS |
| CAAATCTTCCAGACGGTGCT+GGG | 0.461449 | 2_4:+60373135 | Msa0339290:CDS |
| CTGGAGGATTGTCCATTCCT+GGG | 0.463577 | 2_4:+60373874 | Msa0339290:CDS |
| TGGTAATGGAGAATTTACTA+TGG | 0.464045 | 2_4:+60375371 | Msa0339290:CDS |
| GTACATCACTTGAATTCTAT+GGG | 0.464321 | 2_4:+60374526 | Msa0339290:CDS |
| ACGATAAATAACATGCCAAC+TGG | 0.465876 | 2_4:+60373376 | Msa0339290:CDS |
| CCTTTGTATCCGGGTAAAGC+TGG | 0.469299 | 2_4:-60374810 | None:intergenic |
| CTATCTGCTCCTCAATGTTG+TGG | 0.469317 | 2_4:-60377206 | None:intergenic |
| AACAAGCCAAGCAGACCAAA+TGG | 0.472910 | 2_4:-60376119 | None:intergenic |
| CTCTTAGTTACAAACGAGGT+TGG | 0.473193 | 2_4:+60376895 | Msa0339290:CDS |
| TGCTGGATGAGTTGATCATA+TGG | 0.474187 | 2_4:-60375981 | None:intergenic |
| TGAAAGTGGACCTCCAGCAC+TGG | 0.474339 | 2_4:-60374485 | None:intergenic |
| TTGGTCTGAGGAACCAGCTA+AGG | 0.475047 | 2_4:+60376259 | Msa0339290:CDS |
| AAACCACCGCGTTCTCTTGT+CGG | 0.477658 | 2_4:+60371847 | Msa0339290:five_prime_UTR |
| TGCATATGGCTTTGTGAAAG+TGG | 0.479067 | 2_4:-60374499 | None:intergenic |
| CGGACAGTTTCGAAAGTGCT+TGG | 0.479912 | 2_4:-60377020 | None:intergenic |
| TATTTGTATACAGGTGGTAA+TGG | 0.481345 | 2_4:+60375357 | Msa0339290:intron |
| ACTAGCGGACCTCCTGGCAT+TGG | 0.481858 | 2_4:+60375915 | Msa0339290:CDS |
| CAGGTTGTTGATTGGTTTCG+AGG | 0.482960 | 2_4:+60372059 | Msa0339290:intron |
| AGGGAATACATTGAGTAAAC+CGG | 0.485324 | 2_4:-60372151 | None:intergenic |
| TTTGTGTTATTACTAAATCC+AGG | 0.486814 | 2_4:-60373684 | None:intergenic |
| GATCAGAGATGGAAGAAAGA+AGG | 0.490176 | 2_4:-60371780 | None:intergenic |
| GAGTTGCTGGTTCTATTCCT+GGG | 0.491535 | 2_4:+60373709 | Msa0339290:CDS |
| CCTCAGGTAATTTCAATGCT+AGG | 0.494951 | 2_4:+60374451 | Msa0339290:CDS |
| GCTGGAGGCGAAACTGGGAT+TGG | 0.496608 | 2_4:-60376022 | None:intergenic |
| GTAAGTGTACTGGGCATGTT+GGG | 0.496785 | 2_4:-60373340 | None:intergenic |
| GTCAAAGGGTGAACTGTCAC+TGG | 0.496842 | 2_4:-60374569 | None:intergenic |
| TTACCAATTGCAGCAGAAGA+TGG | 0.497022 | 2_4:-60373738 | None:intergenic |
| AATCAAGATCTTCATATGCA+TGG | 0.500359 | 2_4:+60375680 | Msa0339290:CDS |
| GGATTTAGTAATAACACAAA+TGG | 0.500818 | 2_4:+60373687 | Msa0339290:CDS |
| AGAGCAAGAGATGTCAGATC+AGG | 0.506012 | 2_4:-60376164 | None:intergenic |
| CCAAGCAGACCAAATGGATC+AGG | 0.506331 | 2_4:-60376113 | None:intergenic |
| AGGAACAGAACAGCTAGGTT+AGG | 0.506859 | 2_4:-60377436 | None:intergenic |
| CAAGTCGTCCTAGTTCTGCT+GGG | 0.507862 | 2_4:+60374614 | Msa0339290:CDS |
| CTATGGGAAACATGGTTGCT+GGG | 0.508419 | 2_4:+60373829 | Msa0339290:CDS |
| GGAAATTCTTATCCCAGTGC+TGG | 0.510440 | 2_4:+60374472 | Msa0339290:CDS |
| CCACTAGAAAGACTTGATGT+AGG | 0.511491 | 2_4:-60373412 | None:intergenic |
| AGAGGCCTTAATCCAATGCC+AGG | 0.516836 | 2_4:-60375927 | None:intergenic |
| CATTTGCTGGAGGCGAAACT+GGG | 0.517300 | 2_4:-60376027 | None:intergenic |
| TCATATTTGCAGCTATCTCA+TGG | 0.519422 | 2_4:+60373603 | Msa0339290:intron |
| AACAGCGGATCTGGTGGCTT+AGG | 0.522109 | 2_4:+60373924 | Msa0339290:CDS |
| GAAGGAGAATGCTGCTGTTG+AGG | 0.523767 | 2_4:-60375620 | None:intergenic |
| ATCAGAGATGGAAGAAAGAA+GGG | 0.525184 | 2_4:-60371779 | None:intergenic |
| GTTTAGACTAGCGGACCTCC+TGG | 0.528923 | 2_4:+60375909 | Msa0339290:intron |
| TCTTCCTTCTGCTCTGTCAC+AGG | 0.529243 | 2_4:+60373453 | Msa0339290:CDS |
| GAATGTCTCACGTGTAGAGC+AGG | 0.529587 | 2_4:-60376329 | None:intergenic |
| AGTGATAAGCAGATCAGAGA+TGG | 0.530582 | 2_4:-60371791 | None:intergenic |
| CGACGAGTTTCCGGTGAAGA+CGG | 0.532078 | 2_4:-60371823 | None:intergenic |
| AAAACAAGCACATACGAAAG+AGG | 0.534593 | 2_4:+60376978 | Msa0339290:CDS |
| CAAGCACTTTCGAAACTGTC+CGG | 0.537041 | 2_4:+60377021 | Msa0339290:CDS |
| TTGCTGCAGGTGGTATTCAG+GGG | 0.537586 | 2_4:+60373287 | Msa0339290:intron |
| GGGAAGTCATTGAGGTCAAA+GGG | 0.537865 | 2_4:-60374583 | None:intergenic |
| CCTCAATGTTGTGGCAAAGA+CGG | 0.540034 | 2_4:-60377197 | None:intergenic |
| ACGTGAAGCAAGCCCAGGAA+TGG | 0.540879 | 2_4:-60373886 | None:intergenic |
| TTTGACAAGCGGCTCCATGT+TGG | 0.541017 | 2_4:-60376958 | None:intergenic |
| AACATTGGGAGGATAAGCTC+TGG | 0.541683 | 2_4:+60373855 | Msa0339290:CDS |
| TACACAGTACCTTTGTATCC+GGG | 0.542891 | 2_4:-60374819 | None:intergenic |
| GGAATCGATCTTACAACACT+CGG | 0.543662 | 2_4:+60376188 | Msa0339290:CDS |
| AACTCTGGATCACCCTTAGC+TGG | 0.543836 | 2_4:-60376272 | None:intergenic |
| ATTGTATCATATTAGTAGAC+GGG | 0.545307 | 2_4:+60377406 | Msa0339290:three_prime_UTR |
| AGGGAAGTCATTGAGGTCAA+AGG | 0.547739 | 2_4:-60374584 | None:intergenic |
| ATCAAGATCTTCATATGCAT+GGG | 0.548749 | 2_4:+60375681 | Msa0339290:CDS |
| TATTCTTTCTGCAGATGGGG+AGG | 0.548953 | 2_4:+60375555 | Msa0339290:intron |
| AAAGTTATCTTAATGTTGAG+AGG | 0.549263 | 2_4:+60377517 | Msa0339290:three_prime_UTR |
| CATTGAAGCACACTAAACTC+TGG | 0.549441 | 2_4:-60376287 | None:intergenic |
| TGTCGGAGACTCGTAGGCTA+GGG | 0.549843 | 2_4:+60371864 | Msa0339290:five_prime_UTR |
| CTTCATGCCATGATCCCTAA+AGG | 0.549970 | 2_4:-60376066 | None:intergenic |
| TCTGCTGGTTTCAGTTTGGG+AGG | 0.553029 | 2_4:+60375578 | Msa0339290:CDS |
| TTAGCTGGTTCCTCAGACCA+AGG | 0.553506 | 2_4:-60376257 | None:intergenic |
| ATGATGCATGTTCAACAGAC+AGG | 0.554433 | 2_4:-60377456 | None:intergenic |
| GCAGAAGATGGAAGAATCCC+AGG | 0.555252 | 2_4:-60373726 | None:intergenic |
| TTTAGACGTGAAGCAAGCCC+AGG | 0.557274 | 2_4:-60373891 | None:intergenic |
| TTTCTTGATGTAAGTGTACT+GGG | 0.560052 | 2_4:-60373349 | None:intergenic |
| GAACTCTACGTATCATTCAC+AGG | 0.562759 | 2_4:+60375724 | Msa0339290:CDS |
| TCTGGTGGCTTAGGCGTGCA+AGG | 0.564669 | 2_4:+60373933 | Msa0339290:CDS |
| GAAGACTTTCCAGCTTTACC+CGG | 0.566230 | 2_4:+60374801 | Msa0339290:CDS |
| TGTTTGCAGTCTTCTCTGAA+CGG | 0.566355 | 2_4:+60373104 | Msa0339290:intron |
| CCCATAGAACTTGTTATCCG+AGG | 0.568809 | 2_4:-60373813 | None:intergenic |
| TCTACAATAACCGTCTTCAC+CGG | 0.569550 | 2_4:+60371813 | Msa0339290:five_prime_UTR |
| TATGGGAAACATGGTTGCTG+GGG | 0.570932 | 2_4:+60373830 | Msa0339290:CDS |
| AAGTCGTCCTAGTTCTGCTG+GGG | 0.573436 | 2_4:+60374615 | Msa0339290:CDS |
| TTCTCTTGTCGGAGACTCGT+AGG | 0.573645 | 2_4:+60371858 | Msa0339290:five_prime_UTR |
| AATTGTATCATATTAGTAGA+CGG | 0.573961 | 2_4:+60377405 | Msa0339290:three_prime_UTR |
| CATGAATATAATTTATCATG+AGG | 0.575558 | 2_4:+60377258 | Msa0339290:three_prime_UTR |
| ATGGGAAACATGGTTGCTGG+GGG | 0.575821 | 2_4:+60373831 | Msa0339290:CDS |
| GGCGACAAGATAACAGCTCT+CGG | 0.576757 | 2_4:-60377374 | None:intergenic |
| AGAAAGAAGGGTTAGTGCGG+TGG | 0.577125 | 2_4:-60371767 | None:intergenic |
| CACTTTCGAAACTGTCCGGA+GGG | 0.577137 | 2_4:+60377025 | Msa0339290:CDS |
| TTAGCTGAGGGAAGTCATTG+AGG | 0.578044 | 2_4:-60374591 | None:intergenic |
| CCGTCTTTGCCACAACATTG+AGG | 0.578350 | 2_4:+60377197 | Msa0339290:CDS |
| GATTCTCCGTTGCGAATTAG+GGG | 0.581057 | 2_4:+60371893 | Msa0339290:five_prime_UTR |
| GAAAGTGGACCTCCAGCACT+GGG | 0.582125 | 2_4:-60374484 | None:intergenic |
| GGAAGAAAGAAGGGTTAGTG+CGG | 0.584151 | 2_4:-60371770 | None:intergenic |
| AGGTTGTTGATTGGTTTCGA+GGG | 0.585471 | 2_4:+60372060 | Msa0339290:intron |
| AACAAGTTCTATGGGAAACA+TGG | 0.587430 | 2_4:+60373821 | Msa0339290:CDS |
| CCTCGGATAACAAGTTCTAT+GGG | 0.588219 | 2_4:+60373813 | Msa0339290:CDS |
| CACGCACCCAACTGTCCTTG+AGG | 0.588710 | 2_4:-60374640 | None:intergenic |
| ATCATATTGAATGTAGTGTC+TGG | 0.589015 | 2_4:+60377474 | Msa0339290:three_prime_UTR |
| TGTAAGTGTACTGGGCATGT+TGG | 0.589955 | 2_4:-60373341 | None:intergenic |
| GGTTGTTGAACCGCTCCAGT+TGG | 0.590721 | 2_4:-60373391 | None:intergenic |
| CAGGGGTTGCACAACATGCA+TGG | 0.597372 | 2_4:+60373304 | Msa0339290:CDS |
| AATTCTTATCCCAGTGCTGG+AGG | 0.601555 | 2_4:+60374475 | Msa0339290:CDS |
| CCAGCTTTACCCGGATACAA+AGG | 0.603206 | 2_4:+60374810 | Msa0339290:CDS |
| TGGTCTGAGGAACCAGCTAA+GGG | 0.603363 | 2_4:+60376260 | Msa0339290:CDS |
| CGTCTTCACCGGAAACTCGT+CGG | 0.604299 | 2_4:+60371824 | Msa0339290:five_prime_UTR |
| GAATCGATCTTACAACACTC+GGG | 0.607310 | 2_4:+60376189 | Msa0339290:CDS |
| AGTCGTCCTAGTTCTGCTGG+GGG | 0.608355 | 2_4:+60374616 | Msa0339290:CDS |
| TCAGGAGTCAACAGTAGAGG+AGG | 0.608682 | 2_4:+60373642 | Msa0339290:CDS |
| CTCACGTGTAGAGCAGGAGG+TGG | 0.612457 | 2_4:-60376323 | None:intergenic |
| ATGAATATAATTTATCATGA+GGG | 0.614007 | 2_4:+60377259 | Msa0339290:three_prime_UTR |
| AATGGAAACAGCGGATCTGG+TGG | 0.615708 | 2_4:+60373918 | Msa0339290:CDS |
| CATTCAGGAGTCAACAGTAG+AGG | 0.618435 | 2_4:+60373639 | Msa0339290:CDS |
| CCTAGCATTGAAATTACCTG+AGG | 0.619186 | 2_4:-60374451 | None:intergenic |
| ACCAGTGTGCTGATAAATTG+GGG | 0.619587 | 2_4:-60373198 | None:intergenic |
| ACGCCGCTGTTACTGACAGA+AGG | 0.622596 | 2_4:-60375638 | None:intergenic |
| AAATAACATGCCAACTGGAG+CGG | 0.626036 | 2_4:+60373381 | Msa0339290:CDS |
| CTAGGACGACTTGTTAGCTG+AGG | 0.634920 | 2_4:-60374604 | None:intergenic |
| TGTACCTGTGACAGAGCAGA+AGG | 0.635690 | 2_4:-60373457 | None:intergenic |
| CCTACATCAAGTCTTTCTAG+TGG | 0.642177 | 2_4:+60373412 | Msa0339290:CDS |
| TCTCCTTCTGTCAGTAACAG+CGG | 0.645378 | 2_4:+60375635 | Msa0339290:CDS |
| ATCTTCCAGACGGTGCTGGG+CGG | 0.646516 | 2_4:+60373138 | Msa0339290:CDS |
| GTATATAAAAGTTCCCAACA+TGG | 0.647657 | 2_4:+60376944 | Msa0339290:CDS |
| GTATCATATTAGTAGACGGG+AGG | 0.651096 | 2_4:+60377409 | Msa0339290:three_prime_UTR |
| TCAGGCTCTTTACGAAAACA+GGG | 0.653371 | 2_4:+60374732 | Msa0339290:intron |
| TGTCTCACGTGTAGAGCAGG+AGG | 0.654072 | 2_4:-60376326 | None:intergenic |
| ATTGGGAGGATAAGCTCTGG+AGG | 0.656520 | 2_4:+60373858 | Msa0339290:CDS |
| TGATACGTAGAGTTCGAAGA+CGG | 0.656734 | 2_4:-60375716 | None:intergenic |
| GTCGTCCTAGTTCTGCTGGG+GGG | 0.662242 | 2_4:+60374617 | Msa0339290:CDS |
| CAGACAGGAACAGAACAGCT+AGG | 0.663135 | 2_4:-60377441 | None:intergenic |
| TCCCCAATTTATCAGCACAC+TGG | 0.666416 | 2_4:+60373197 | Msa0339290:CDS |
| CTGTGACTGCATCATTGACA+TGG | 0.666525 | 2_4:-60375427 | None:intergenic |
| TAGATTCCCCTAATTCGCAA+CGG | 0.667577 | 2_4:-60371899 | None:intergenic |
| ATCACAAAGAGCATCGCATG+TGG | 0.668075 | 2_4:+60376922 | Msa0339290:CDS |
| GCACTTTCGAAACTGTCCGG+AGG | 0.673166 | 2_4:+60377024 | Msa0339290:CDS |
| TTACAGCTGACATTTGCTGG+AGG | 0.673422 | 2_4:-60376037 | None:intergenic |
| GGACAAAATCGATTGATGAG+TGG | 0.674391 | 2_4:+60373954 | Msa0339290:CDS |
| TCTACTTCAAATCTTCCAGA+CGG | 0.679222 | 2_4:+60373128 | Msa0339290:CDS |
| CTAAATTTAAATGGAAACAG+CGG | 0.686707 | 2_4:+60373909 | Msa0339290:CDS |
| ATGAGTGGTGTGCTTCCACA+AGG | 0.686958 | 2_4:+60373969 | Msa0339290:CDS |
| TAGGACGACTTGTTAGCTGA+GGG | 0.692911 | 2_4:-60374603 | None:intergenic |
| TGGGAAACATGGTTGCTGGG+GGG | 0.692996 | 2_4:+60373832 | Msa0339290:CDS |
| GTTTCTCTTAGTTACAAACG+AGG | 0.699117 | 2_4:+60376891 | Msa0339290:CDS |
| TACATCACTTGAATTCTATG+GGG | 0.705637 | 2_4:+60374527 | Msa0339290:CDS |
| GGCCTTAATCCAATGCCAGG+AGG | 0.705806 | 2_4:-60375924 | None:intergenic |
| AAGTGCTTGGATCAAAACAG+TGG | 0.711615 | 2_4:-60377007 | None:intergenic |
| GACAAGATAACAGCTCTCGG+TGG | 0.746325 | 2_4:-60377371 | None:intergenic |
| GAGTCTCCGACAAGAGAACG+CGG | 0.764653 | 2_4:-60371853 | None:intergenic |
| AGTGTGCTGATAAATTGGGG+AGG | 0.772007 | 2_4:-60373195 | None:intergenic |
| TCTCCGACAAGAGAACGCGG+TGG | 0.785269 | 2_4:-60371850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAATTGGATATTTTTT+AGG | - | chr2_4:60374049-60374068 | None:intergenic | 10.0% |
| !! | AAAAATATCCAATTATATTT+AGG | + | chr2_4:60374050-60374069 | Msa0339290:intron | 10.0% |
| !!! | TTGTATTATTTTCTTATTTT+TGG | + | chr2_4:60374907-60374926 | Msa0339290:intron | 10.0% |
| !!! | TGTATTATTTTCTTATTTTT+GGG | + | chr2_4:60374908-60374927 | Msa0339290:intron | 10.0% |
| !!! | TTTTGTTATTTTTTGTTATT+TGG | + | chr2_4:60376640-60376659 | Msa0339290:intron | 10.0% |
| !! | TTTGTATATGATTAAAAATA+AGG | - | chr2_4:60376849-60376868 | None:intergenic | 10.0% |
| !!! | TAGAAATTTTACTTGAAAAT+AGG | - | chr2_4:60372929-60372948 | None:intergenic | 15.0% |
| !! | AAATATGATATATAGACAAA+TGG | - | chr2_4:60373591-60373610 | None:intergenic | 15.0% |
| !! | AAAGATAACCTAAATATAAT+TGG | - | chr2_4:60374061-60374080 | None:intergenic | 15.0% |
| !! | AAACCAAATTAAACAAATAT+AGG | - | chr2_4:60374342-60374361 | None:intergenic | 15.0% |
| !!! | GTATTATTTTCTTATTTTTG+GGG | + | chr2_4:60374909-60374928 | Msa0339290:intron | 15.0% |
| !! | TCAAAACAAATAAAAGAAAA+TGG | - | chr2_4:60375063-60375082 | None:intergenic | 15.0% |
| !!! | GATGAGATTTTTATTATTTT+TGG | + | chr2_4:60375257-60375276 | Msa0339290:intron | 15.0% |
| !! | TTATGATAATATTTGTATAC+AGG | + | chr2_4:60375348-60375367 | Msa0339290:intron | 15.0% |
| !! | AACTAAAAAGCAAAAAATAA+GGG | - | chr2_4:60376382-60376401 | None:intergenic | 15.0% |
| !!! | TTATTTTTTGCTTTTTAGTT+GGG | + | chr2_4:60376382-60376401 | Msa0339290:intron | 15.0% |
| !! | CAAAAAATAACAAAACAAAA+GGG | - | chr2_4:60376635-60376654 | None:intergenic | 15.0% |
| !! | ACAAAAAATAACAAAACAAA+AGG | - | chr2_4:60376636-60376655 | None:intergenic | 15.0% |
| !! | CTCAAAATATTTCAAATTTA+AGG | - | chr2_4:60376822-60376841 | None:intergenic | 15.0% |
| !! | ATGAATATAATTTATCATGA+GGG | + | chr2_4:60377259-60377278 | Msa0339290:three_prime_UTR | 15.0% |
| !! | ATTATTGCAAAAATCCTATA+AGG | + | chr2_4:60372607-60372626 | Msa0339290:intron | 20.0% |
| !!! | GTAAGATTTTTACTAACTTT+AGG | - | chr2_4:60372793-60372812 | None:intergenic | 20.0% |
| !!! | CAGATATTGATTTATTTTTC+TGG | + | chr2_4:60373043-60373062 | Msa0339290:intron | 20.0% |
| !! | TCTGTTATAATTTAGATCTA+TGG | - | chr2_4:60373080-60373099 | None:intergenic | 20.0% |
| !!! | TTTTACGTATAATTAATCCA+GGG | + | chr2_4:60374158-60374177 | Msa0339290:intron | 20.0% |
| !! | TCACCTATATTTGTTTAATT+TGG | + | chr2_4:60374336-60374355 | Msa0339290:intron | 20.0% |
| !!! | ACATTATTCTTTTTTGTTGA+AGG | - | chr2_4:60374700-60374719 | None:intergenic | 20.0% |
| !! | TAATGTAATCTATACATTTC+AGG | + | chr2_4:60374714-60374733 | Msa0339290:intron | 20.0% |
| !!! | TTATTTTTGGGGTTATAAAA+GGG | + | chr2_4:60374920-60374939 | Msa0339290:intron | 20.0% |
| !!! | TTTCTTTTATTTGTTTTGAC+AGG | + | chr2_4:60375064-60375083 | Msa0339290:intron | 20.0% |
| !! | CAACTAAAAAGCAAAAAATA+AGG | - | chr2_4:60376383-60376402 | None:intergenic | 20.0% |
| !!! | CTTATTTTTTGCTTTTTAGT+TGG | + | chr2_4:60376381-60376400 | Msa0339290:intron | 20.0% |
| !!! | TGGTTTATTAAGTTGTTATA+TGG | + | chr2_4:60376745-60376764 | Msa0339290:intron | 20.0% |
| !!! | TTTTGTTTTTCAGTATGAAA+TGG | + | chr2_4:60377163-60377182 | Msa0339290:CDS | 20.0% |
| !! | ATAAAAAGATTTACACTGAA+GGG | - | chr2_4:60377237-60377256 | None:intergenic | 20.0% |
| !! | CATGAATATAATTTATCATG+AGG | + | chr2_4:60377258-60377277 | Msa0339290:three_prime_UTR | 20.0% |
| !! | ACACTAATGCTTATATAAAA+TGG | - | chr2_4:60377288-60377307 | None:intergenic | 20.0% |
| !! | ATATGATACAATTCACATTT+GGG | - | chr2_4:60377398-60377417 | None:intergenic | 20.0% |
| !! | AATATGATACAATTCACATT+TGG | - | chr2_4:60377399-60377418 | None:intergenic | 20.0% |
| !! | AATTGTATCATATTAGTAGA+CGG | + | chr2_4:60377405-60377424 | Msa0339290:three_prime_UTR | 20.0% |
| !! | GGTGACACTAATTTAAAATT+GGG | - | chr2_4:60371720-60371739 | None:intergenic | 25.0% |
| !! | AATTTGAAACTACAGCAATT+CGG | - | chr2_4:60372224-60372243 | None:intergenic | 25.0% |
| !! | ATTGCTGTAGTTTCAAATTT+TGG | + | chr2_4:60372225-60372244 | Msa0339290:intron | 25.0% |
| ! | TTATGCTAGATTGAAGTAAA+TGG | + | chr2_4:60372275-60372294 | Msa0339290:intron | 25.0% |
| ! | TATGGTAGAATAAATCTAGA+AGG | + | chr2_4:60372542-60372561 | Msa0339290:intron | 25.0% |
| ! | AAATACATTAAACTATGCAC+CGG | - | chr2_4:60373568-60373587 | None:intergenic | 25.0% |
| !! | TTTGTGTTATTACTAAATCC+AGG | - | chr2_4:60373687-60373706 | None:intergenic | 25.0% |
| ! | GGATTTAGTAATAACACAAA+TGG | + | chr2_4:60373687-60373706 | Msa0339290:CDS | 25.0% |
| ! | CTAAATTTAAATGGAAACAG+CGG | + | chr2_4:60373909-60373928 | Msa0339290:CDS | 25.0% |
| !! | CTTTTACGTATAATTAATCC+AGG | + | chr2_4:60374157-60374176 | Msa0339290:intron | 25.0% |
| ! | TAATTAATCCAGGGATATAT+AGG | + | chr2_4:60374167-60374186 | Msa0339290:intron | 25.0% |
| !!! | CTTTTCTTATCTTGTTATCT+TGG | + | chr2_4:60374215-60374234 | Msa0339290:intron | 25.0% |
| ! | ACAAATATAGGTGAATTTCT+AGG | - | chr2_4:60374330-60374349 | None:intergenic | 25.0% |
| !!! | TGGTTTTTTTTTTTGTCCTT+TGG | + | chr2_4:60374356-60374375 | Msa0339290:intron | 25.0% |
| !!! | CTTATTTTTGGGGTTATAAA+AGG | + | chr2_4:60374919-60374938 | Msa0339290:intron | 25.0% |
| ! | TTTCATTATTGAATCGTTGA+TGG | + | chr2_4:60375203-60375222 | Msa0339290:intron | 25.0% |
| ! | TGATAATATTTGTATACAGG+TGG | + | chr2_4:60375351-60375370 | Msa0339290:intron | 25.0% |
| ! | ATCAGATAATATCATGAACA+AGG | - | chr2_4:60375510-60375529 | None:intergenic | 25.0% |
| !! | AAAACTTTTTATGTGATGTG+AGG | + | chr2_4:60375815-60375834 | Msa0339290:intron | 25.0% |
| !! | AAAATCTTCACAAGACTTTT+GGG | + | chr2_4:60376231-60376250 | Msa0339290:CDS | 25.0% |
| !!! | CGTTGTTTTACATATTTTAC+AGG | + | chr2_4:60376457-60376476 | Msa0339290:CDS | 25.0% |
| !! | TGAATAGGATTTGTTTCAAA+AGG | - | chr2_4:60376485-60376504 | None:intergenic | 25.0% |
| !! | ATAAGTAAGAATTTTCAGAG+TGG | - | chr2_4:60376783-60376802 | None:intergenic | 25.0% |
| ! | AAAAGATTACCAACAAACTA+TGG | + | chr2_4:60376866-60376885 | Msa0339290:intron | 25.0% |
| !! | TGTTGTTGTTATATTATTGC+AGG | + | chr2_4:60377091-60377110 | Msa0339290:intron | 25.0% |
| ! | TAAAAAGATTTACACTGAAG+GGG | - | chr2_4:60377236-60377255 | None:intergenic | 25.0% |
| ! | CATAAAAAGATTTACACTGA+AGG | - | chr2_4:60377238-60377257 | None:intergenic | 25.0% |
| ! | ATTGTATCATATTAGTAGAC+GGG | + | chr2_4:60377406-60377425 | Msa0339290:three_prime_UTR | 25.0% |
| ! | GGGTGACACTAATTTAAAAT+TGG | - | chr2_4:60371721-60371740 | None:intergenic | 30.0% |
| ! | ATCTGATGATTTTTGTATGC+AGG | + | chr2_4:60372040-60372059 | Msa0339290:intron | 30.0% |
| ! | GAAAGATTCCGAGTATTTTT+CGG | + | chr2_4:60372082-60372101 | Msa0339290:five_prime_UTR | 30.0% |
| ! | AAAGATTCCGAGTATTTTTC+GGG | + | chr2_4:60372083-60372102 | Msa0339290:five_prime_UTR | 30.0% |
| CTCTTCTGATCATTCATATT+TGG | + | chr2_4:60372345-60372364 | Msa0339290:intron | 30.0% | |
| ! | ACCAATTCAAACATTAGCTT+AGG | + | chr2_4:60372472-60372491 | Msa0339290:intron | 30.0% |
| ACCTAAGCTAATGTTTGAAT+TGG | - | chr2_4:60372476-60372495 | None:intergenic | 30.0% | |
| AAACATACCATACTTCTCTA+TGG | + | chr2_4:60372524-60372543 | Msa0339290:intron | 30.0% | |
| TATTCTACCATAGAGAAGTA+TGG | - | chr2_4:60372534-60372553 | None:intergenic | 30.0% | |
| GATATTTCCTTGTGCTTATA+CGG | - | chr2_4:60372710-60372729 | None:intergenic | 30.0% | |
| GCAAAAATCCTAGAAACATT+AGG | + | chr2_4:60372745-60372764 | Msa0339290:intron | 30.0% | |
| TACATATGCCTAATGTTTCT+AGG | - | chr2_4:60372756-60372775 | None:intergenic | 30.0% | |
| AGAAACATTAGGCATATGTA+AGG | + | chr2_4:60372756-60372775 | Msa0339290:intron | 30.0% | |
| GAAACATTAGGCATATGTAA+GGG | + | chr2_4:60372757-60372776 | Msa0339290:intron | 30.0% | |
| AAACATTAGGCATATGTAAG+GGG | + | chr2_4:60372758-60372777 | Msa0339290:intron | 30.0% | |
| TAAGAAATGAGTACTTGACT+AGG | - | chr2_4:60372842-60372861 | None:intergenic | 30.0% | |
| TGATAAATCCAATGTGCATA+AGG | - | chr2_4:60372973-60372992 | None:intergenic | 30.0% | |
| TTAGATCTATGGTGAATGAA+AGG | - | chr2_4:60373069-60373088 | None:intergenic | 30.0% | |
| TATGAAACTAAATCAAGGAG+AGG | - | chr2_4:60373255-60373274 | None:intergenic | 30.0% | |
| GCGATTATGAAACTAAATCA+AGG | - | chr2_4:60373260-60373279 | None:intergenic | 30.0% | |
| TTTCTTGATGTAAGTGTACT+GGG | - | chr2_4:60373352-60373371 | None:intergenic | 30.0% | |
| TTTGAGTATCTCAAGAGTAA+CGG | + | chr2_4:60373494-60373513 | Msa0339290:intron | 30.0% | |
| GTCTTTCATTATCTTTCTAC+CGG | + | chr2_4:60373546-60373565 | Msa0339290:intron | 30.0% | |
| GCTTCACGTCTAAATTTAAA+TGG | + | chr2_4:60373900-60373919 | Msa0339290:CDS | 30.0% | |
| !! | TCTTGTTGACTTGATTATCT+TGG | + | chr2_4:60374253-60374272 | Msa0339290:intron | 30.0% |
| AGATCCTGAATCAAAATATG+AGG | - | chr2_4:60374431-60374450 | None:intergenic | 30.0% | |
| AGTACATCACTTGAATTCTA+TGG | + | chr2_4:60374525-60374544 | Msa0339290:CDS | 30.0% | |
| GTACATCACTTGAATTCTAT+GGG | + | chr2_4:60374526-60374545 | Msa0339290:CDS | 30.0% | |
| TACATCACTTGAATTCTATG+GGG | + | chr2_4:60374527-60374546 | Msa0339290:CDS | 30.0% | |
| !!! | TCTTGGTTTTGTTGTACAAT+AGG | - | chr2_4:60374765-60374784 | None:intergenic | 30.0% |
| ! | CATTTTGAATGCTAAACTCT+TGG | - | chr2_4:60374782-60374801 | None:intergenic | 30.0% |
| AGTTTATACTCTCTTCTTGA+AGG | + | chr2_4:60374946-60374965 | Msa0339290:intron | 30.0% | |
| CTGAGAAATCTAATTTACAG+AGG | + | chr2_4:60375298-60375317 | Msa0339290:intron | 30.0% | |
| TATTTGTATACAGGTGGTAA+TGG | + | chr2_4:60375357-60375376 | Msa0339290:intron | 30.0% | |
| !! | TGGTAATGGAGAATTTACTA+TGG | + | chr2_4:60375371-60375390 | Msa0339290:CDS | 30.0% |
| ! | TGTCATTAAGTTGTTCTTTC+TGG | - | chr2_4:60375404-60375423 | None:intergenic | 30.0% |
| ! | CTTTTACTGTATGAAACTCA+CGG | - | chr2_4:60375460-60375479 | None:intergenic | 30.0% |
| ATGAAGATCTTGATTGTTCA+TGG | - | chr2_4:60375675-60375694 | None:intergenic | 30.0% | |
| AATCAAGATCTTCATATGCA+TGG | + | chr2_4:60375680-60375699 | Msa0339290:CDS | 30.0% | |
| ATCAAGATCTTCATATGCAT+GGG | + | chr2_4:60375681-60375700 | Msa0339290:CDS | 30.0% | |
| !!! | ATGTGAGGTTTTTTTTGAAC+TGG | + | chr2_4:60375830-60375849 | Msa0339290:intron | 30.0% |
| ! | TTCTAATCGCTTATGGATTT+TGG | + | chr2_4:60375887-60375906 | Msa0339290:intron | 30.0% |
| ACAGTATTTGGAGAATTTAG+AGG | - | chr2_4:60375948-60375967 | None:intergenic | 30.0% | |
| AATTCTCCAAATACTGTTTC+TGG | + | chr2_4:60375951-60375970 | Msa0339290:CDS | 30.0% | |
| ! | GAAAATCTTCACAAGACTTT+TGG | + | chr2_4:60376230-60376249 | Msa0339290:CDS | 30.0% |
| AAAAGCAAAAAATAAGGGCA+GGG | - | chr2_4:60376377-60376396 | None:intergenic | 30.0% | |
| AAAAAGCAAAAAATAAGGGC+AGG | - | chr2_4:60376378-60376397 | None:intergenic | 30.0% | |
| ! | GTATTTTGCGAAGTTTACTT+TGG | + | chr2_4:60376432-60376451 | Msa0339290:CDS | 30.0% |
| TATGCATAGTGAAAGTGAAT+AGG | - | chr2_4:60376500-60376519 | None:intergenic | 30.0% | |
| TTCTTACTTATTTATCCACG+TGG | + | chr2_4:60376792-60376811 | Msa0339290:intron | 30.0% | |
| GTATATAAAAGTTCCCAACA+TGG | + | chr2_4:60376944-60376963 | Msa0339290:CDS | 30.0% | |
| ACAACAACAACATATAACAG+AGG | - | chr2_4:60377080-60377099 | None:intergenic | 30.0% | |
| GCAGGATAATTGTTCTATTT+AGG | + | chr2_4:60377109-60377128 | Msa0339290:intron | 30.0% | |
| TGTTCTATTTAGGCTTCTAA+TGG | + | chr2_4:60377119-60377138 | Msa0339290:intron | 30.0% | |
| !!! | TAATGGACACATTTTTTTGC+AGG | + | chr2_4:60377136-60377155 | Msa0339290:intron | 30.0% |
| !! | TGTTTTTCAGTATGAAATGG+TGG | + | chr2_4:60377166-60377185 | Msa0339290:CDS | 30.0% |
| ATCATATTGAATGTAGTGTC+TGG | + | chr2_4:60377474-60377493 | Msa0339290:three_prime_UTR | 30.0% | |
| GGAGACAAGATGAGAAATTA+GGG | - | chr2_4:60371741-60371760 | None:intergenic | 35.0% | |
| AGGAGACAAGATGAGAAATT+AGG | - | chr2_4:60371742-60371761 | None:intergenic | 35.0% | |
| ATCAGAGATGGAAGAAAGAA+GGG | - | chr2_4:60371782-60371801 | None:intergenic | 35.0% | |
| TTTGTATGCAGGTTGTTGAT+TGG | + | chr2_4:60372051-60372070 | Msa0339290:intron | 35.0% | |
| GTTGAAATTCATGCAATGTC+CGG | + | chr2_4:60372132-60372151 | Msa0339290:exon | 35.0% | |
| AGGGAATACATTGAGTAAAC+CGG | - | chr2_4:60372154-60372173 | None:intergenic | 35.0% | |
| AACAGTGCATGTTCAGTAAA+GGG | - | chr2_4:60372194-60372213 | None:intergenic | 35.0% | |
| TAACAGTGCATGTTCAGTAA+AGG | - | chr2_4:60372195-60372214 | None:intergenic | 35.0% | |
| CTAGATTGAAGTAAATGGCT+GGG | + | chr2_4:60372280-60372299 | Msa0339290:intron | 35.0% | |
| TCCTTGTCCTTATAGAGTAT+CGG | - | chr2_4:60372572-60372591 | None:intergenic | 35.0% | |
| TCTATAAGGACAAGGAAACA+TGG | + | chr2_4:60372576-60372595 | Msa0339290:intron | 35.0% | |
| TCCTTGTCCTTATAGAGTAT+CGG | - | chr2_4:60372572-60372591 | None:intergenic | 35.0% | |
| TCTACTTCAAATCTTCCAGA+CGG | + | chr2_4:60373128-60373147 | Msa0339290:CDS | 35.0% | |
| !! | ACTTCATTTTCTAGTCAGTC+TGG | + | chr2_4:60373167-60373186 | Msa0339290:CDS | 35.0% |
| GTTTCTTGATGTAAGTGTAC+TGG | - | chr2_4:60373353-60373372 | None:intergenic | 35.0% | |
| ACGATAAATAACATGCCAAC+TGG | + | chr2_4:60373376-60373395 | Msa0339290:CDS | 35.0% | |
| CTCTTGAGATACTCAAACAA+AGG | - | chr2_4:60373491-60373510 | None:intergenic | 35.0% | |
| TCATATTTGCAGCTATCTCA+TGG | + | chr2_4:60373603-60373622 | Msa0339290:intron | 35.0% | |
| ! | ATAAGTGTTGTAGGAAATCC+TGG | + | chr2_4:60373666-60373685 | Msa0339290:CDS | 35.0% |
| AATAACACAAATGGAGTTGC+TGG | + | chr2_4:60373696-60373715 | Msa0339290:CDS | 35.0% | |
| AACAAGTTCTATGGGAAACA+TGG | + | chr2_4:60373821-60373840 | Msa0339290:CDS | 35.0% | |
| ! | CTTCCACAAGGTATGTATTT+TGG | + | chr2_4:60373981-60374000 | Msa0339290:intron | 35.0% |
| GAGATCTCTTTCAAAAGAGT+TGG | + | chr2_4:60374093-60374112 | Msa0339290:intron | 35.0% | |
| !!! | AGGACTACACTCTTTTTTCA+TGG | + | chr2_4:60374187-60374206 | Msa0339290:intron | 35.0% |
| ATAGCTTCATGAGATTCCAA+AGG | - | chr2_4:60374375-60374394 | None:intergenic | 35.0% | |
| AATCAAAATATGAGGAGGTC+TGG | - | chr2_4:60374423-60374442 | None:intergenic | 35.0% | |
| !!! | ACCTCCTCATATTTTGATTC+AGG | + | chr2_4:60374424-60374443 | Msa0339290:intron | 35.0% |
| TCCTGAATCAAAATATGAGG+AGG | - | chr2_4:60374428-60374447 | None:intergenic | 35.0% | |
| ATACACAGTACCTTTGTATC+CGG | - | chr2_4:60374823-60374842 | None:intergenic | 35.0% | |
| ! | TTGACAGCACATTTTTCGTT+AGG | + | chr2_4:60374868-60374887 | Msa0339290:intron | 35.0% |
| ATTTGGCGAAGATGCTTTAA+TGG | + | chr2_4:60375143-60375162 | Msa0339290:intron | 35.0% | |
| AATGGTTCCTATTGTTGTAG+AGG | + | chr2_4:60375161-60375180 | Msa0339290:intron | 35.0% | |
| ATCAACTCCTCTACAACAAT+AGG | - | chr2_4:60375171-60375190 | None:intergenic | 35.0% | |
| ! | ATTTACAGAGGTTAGTCAGT+TGG | + | chr2_4:60375310-60375329 | Msa0339290:intron | 35.0% |
| ATCTGTATTCTTTCTGCAGA+TGG | + | chr2_4:60375550-60375569 | Msa0339290:intron | 35.0% | |
| TCTGTATTCTTTCTGCAGAT+GGG | + | chr2_4:60375551-60375570 | Msa0339290:intron | 35.0% | |
| CGACTTTCCTAATGTAAATG+AGG | + | chr2_4:60375751-60375770 | Msa0339290:intron | 35.0% | |
| ! | AACTTGCTTTGATGGGAATA+TGG | - | chr2_4:60375860-60375879 | None:intergenic | 35.0% |
| !!! | TGGATTTTGGTTTAGACTAG+CGG | + | chr2_4:60375900-60375919 | Msa0339290:intron | 35.0% |
| !! | TCCAAATACTGTTTCTGGTA+CGG | + | chr2_4:60375956-60375975 | Msa0339290:CDS | 35.0% |
| AGCTGTAAATCAGTCCTTTA+GGG | + | chr2_4:60376052-60376071 | Msa0339290:CDS | 35.0% | |
| !! | TTGGCTTGTTAAGTGTAATC+AGG | + | chr2_4:60376132-60376151 | Msa0339290:intron | 35.0% |
| ! | TTCTTTTATGTGATGCAGCA+AGG | + | chr2_4:60376409-60376428 | Msa0339290:intron | 35.0% |
| ! | TCTTTTATGTGATGCAGCAA+GGG | + | chr2_4:60376410-60376429 | Msa0339290:intron | 35.0% |
| TATAGCTGTGCTTCATCTTT+GGG | - | chr2_4:60376576-60376595 | None:intergenic | 35.0% | |
| ATATAGCTGTGCTTCATCTT+TGG | - | chr2_4:60376577-60376596 | None:intergenic | 35.0% | |
| !! | TTGTTATTTGGCCTTGTTTC+CGG | + | chr2_4:60376652-60376671 | Msa0339290:intron | 35.0% |
| CAAATTTAAGGATAACCACG+TGG | - | chr2_4:60376810-60376829 | None:intergenic | 35.0% | |
| ! | GAGAAACAACCATAGTTTGT+TGG | - | chr2_4:60376878-60376897 | None:intergenic | 35.0% |
| GTTTCTCTTAGTTACAAACG+AGG | + | chr2_4:60376891-60376910 | Msa0339290:CDS | 35.0% | |
| !!! | TATGTGCTTGTTTTGACAAG+CGG | - | chr2_4:60376972-60376991 | None:intergenic | 35.0% |
| AAAACAAGCACATACGAAAG+AGG | + | chr2_4:60376978-60376997 | Msa0339290:CDS | 35.0% | |
| ! | TGGGTTATTGCTTTGTTCCT+GGG | - | chr2_4:60371701-60371720 | None:intergenic | 40.0% |
| ! | TTGGGTTATTGCTTTGTTCC+TGG | - | chr2_4:60371702-60371721 | None:intergenic | 40.0% |
| GATCAGAGATGGAAGAAAGA+AGG | - | chr2_4:60371783-60371802 | None:intergenic | 40.0% | |
| AGTGATAAGCAGATCAGAGA+TGG | - | chr2_4:60371794-60371813 | None:intergenic | 40.0% | |
| TCTACAATAACCGTCTTCAC+CGG | + | chr2_4:60371813-60371832 | Msa0339290:five_prime_UTR | 40.0% | |
| TGATTCTCCGTTGCGAATTA+GGG | + | chr2_4:60371892-60371911 | Msa0339290:five_prime_UTR | 40.0% | |
| TAGATTCCCCTAATTCGCAA+CGG | - | chr2_4:60371902-60371921 | None:intergenic | 40.0% | |
| !! | AGGTTGTTGATTGGTTTCGA+GGG | + | chr2_4:60372060-60372079 | Msa0339290:intron | 40.0% |
| !!! | TCCGAGTATTTTTCGGGTTT+AGG | + | chr2_4:60372089-60372108 | Msa0339290:five_prime_UTR | 40.0% |
| CCCTAAACCCGAAAAATACT+CGG | - | chr2_4:60372093-60372112 | None:intergenic | 40.0% | |
| !!! | CCGAGTATTTTTCGGGTTTA+GGG | + | chr2_4:60372090-60372109 | Msa0339290:five_prime_UTR | 40.0% |
| TCAGTAAAGGGCAAGAAACA+GGG | - | chr2_4:60372182-60372201 | None:intergenic | 40.0% | |
| TTCAGTAAAGGGCAAGAAAC+AGG | - | chr2_4:60372183-60372202 | None:intergenic | 40.0% | |
| GCTAGATTGAAGTAAATGGC+TGG | + | chr2_4:60372279-60372298 | Msa0339290:intron | 40.0% | |
| AGGATTGCCGATACTCTATA+AGG | + | chr2_4:60372562-60372581 | Msa0339290:intron | 40.0% | |
| !! | AGAGTATCGGCAATCCTTAT+AGG | - | chr2_4:60372624-60372643 | None:intergenic | 40.0% |
| AGGATTGCCGATACTCTATA+AGG | + | chr2_4:60372562-60372581 | Msa0339290:intron | 40.0% | |
| TCCTTGTGCTTATACGGTAT+CGG | - | chr2_4:60372704-60372723 | None:intergenic | 40.0% | |
| AGGCATGCTATACAGAACAT+GGG | - | chr2_4:60372953-60372972 | None:intergenic | 40.0% | |
| AAGGCATGCTATACAGAACA+TGG | - | chr2_4:60372954-60372973 | None:intergenic | 40.0% | |
| ATAGCATGCCTTATGCACAT+TGG | + | chr2_4:60372962-60372981 | Msa0339290:intron | 40.0% | |
| TGTTTGCAGTCTTCTCTGAA+CGG | + | chr2_4:60373104-60373123 | Msa0339290:intron | 40.0% | |
| ! | ACCAGTGTGCTGATAAATTG+GGG | - | chr2_4:60373201-60373220 | None:intergenic | 40.0% |
| ! | CACCAGTGTGCTGATAAATT+GGG | - | chr2_4:60373202-60373221 | None:intergenic | 40.0% |
| ! | ACACCAGTGTGCTGATAAAT+TGG | - | chr2_4:60373203-60373222 | None:intergenic | 40.0% |
| AAATAACATGCCAACTGGAG+CGG | + | chr2_4:60373381-60373400 | Msa0339290:CDS | 40.0% | |
| CCACTAGAAAGACTTGATGT+AGG | - | chr2_4:60373415-60373434 | None:intergenic | 40.0% | |
| CCTACATCAAGTCTTTCTAG+TGG | + | chr2_4:60373412-60373431 | Msa0339290:CDS | 40.0% | |
| ! | AGAGGAGGTATAAGTGTTGT+AGG | + | chr2_4:60373657-60373676 | Msa0339290:CDS | 40.0% |
| TTACCAATTGCAGCAGAAGA+TGG | - | chr2_4:60373741-60373760 | None:intergenic | 40.0% | |
| !!! | ATTGGGAGTATCCCCAATTT+TGG | + | chr2_4:60373779-60373798 | Msa0339290:intron | 40.0% |
| !!! | TTGGGAGTATCCCCAATTTT+GGG | + | chr2_4:60373780-60373799 | Msa0339290:intron | 40.0% |
| ACCTGCATTTCCCAAAATTG+GGG | - | chr2_4:60373793-60373812 | None:intergenic | 40.0% | |
| GACCTGCATTTCCCAAAATT+GGG | - | chr2_4:60373794-60373813 | None:intergenic | 40.0% | |
| TCCTCGGATAACAAGTTCTA+TGG | + | chr2_4:60373812-60373831 | Msa0339290:CDS | 40.0% | |
| CCTCGGATAACAAGTTCTAT+GGG | + | chr2_4:60373813-60373832 | Msa0339290:CDS | 40.0% | |
| TTAAATGGAAACAGCGGATC+TGG | + | chr2_4:60373915-60373934 | Msa0339290:CDS | 40.0% | |
| GGACAAAATCGATTGATGAG+TGG | + | chr2_4:60373954-60373973 | Msa0339290:CDS | 40.0% | |
| CGACCAAAATACATACCTTG+TGG | - | chr2_4:60373987-60374006 | None:intergenic | 40.0% | |
| ACAAGTGCATTAAGGTGACA+TGG | + | chr2_4:60374009-60374028 | Msa0339290:intron | 40.0% | |
| AGTGTAGTCCTATATATCCC+TGG | - | chr2_4:60374178-60374197 | None:intergenic | 40.0% | |
| !! | TTTTGATTCAGGATCTCCTC+AGG | + | chr2_4:60374435-60374454 | Msa0339290:intron | 40.0% |
| ! | CCTAGCATTGAAATTACCTG+AGG | - | chr2_4:60374454-60374473 | None:intergenic | 40.0% |
| CCTCAGGTAATTTCAATGCT+AGG | + | chr2_4:60374451-60374470 | Msa0339290:CDS | 40.0% | |
| !! | TGCATATGGCTTTGTGAAAG+TGG | - | chr2_4:60374502-60374521 | None:intergenic | 40.0% |
| AGTGATGTACTGCTTGCATA+TGG | - | chr2_4:60374516-60374535 | None:intergenic | 40.0% | |
| TTCAGGCTCTTTACGAAAAC+AGG | + | chr2_4:60374731-60374750 | Msa0339290:intron | 40.0% | |
| TCAGGCTCTTTACGAAAACA+GGG | + | chr2_4:60374732-60374751 | Msa0339290:intron | 40.0% | |
| TACACAGTACCTTTGTATCC+GGG | - | chr2_4:60374822-60374841 | None:intergenic | 40.0% | |
| ! | CTCTCTTCTTGAAGGAGTTT+TGG | + | chr2_4:60374954-60374973 | Msa0339290:intron | 40.0% |
| TGTGTGACCTGTCATACATT+TGG | + | chr2_4:60375126-60375145 | Msa0339290:intron | 40.0% | |
| ATCTTCGCCAAATGTATGAC+AGG | - | chr2_4:60375136-60375155 | None:intergenic | 40.0% | |
| CTGTATTCTTTCTGCAGATG+GGG | + | chr2_4:60375552-60375571 | Msa0339290:intron | 40.0% | |
| TGATACGTAGAGTTCGAAGA+CGG | - | chr2_4:60375719-60375738 | None:intergenic | 40.0% | |
| GAACTCTACGTATCATTCAC+AGG | + | chr2_4:60375724-60375743 | Msa0339290:CDS | 40.0% | |
| GCAAGTGCCTCATTTACATT+AGG | - | chr2_4:60375761-60375780 | None:intergenic | 40.0% | |
| ! | CGTCAGAAACTTGCTTTGAT+GGG | - | chr2_4:60375867-60375886 | None:intergenic | 40.0% |
| ! | ACGTCAGAAACTTGCTTTGA+TGG | - | chr2_4:60375868-60375887 | None:intergenic | 40.0% |
| TCTGACGTTCTAATCGCTTA+TGG | + | chr2_4:60375880-60375899 | Msa0339290:intron | 40.0% | |
| !! | CCAAATACTGTTTCTGGTAC+GGG | + | chr2_4:60375957-60375976 | Msa0339290:CDS | 40.0% |
| !! | TGCTGGATGAGTTGATCATA+TGG | - | chr2_4:60375984-60376003 | None:intergenic | 40.0% |
| GATTTACAGCTGACATTTGC+TGG | - | chr2_4:60376043-60376062 | None:intergenic | 40.0% | |
| CAGCTGTAAATCAGTCCTTT+AGG | + | chr2_4:60376051-60376070 | Msa0339290:CDS | 40.0% | |
| ! | AATCAGTCCTTTAGGGATCA+TGG | + | chr2_4:60376059-60376078 | Msa0339290:CDS | 40.0% |
| GGAATCGATCTTACAACACT+CGG | + | chr2_4:60376188-60376207 | Msa0339290:CDS | 40.0% | |
| GAATCGATCTTACAACACTC+GGG | + | chr2_4:60376189-60376208 | Msa0339290:CDS | 40.0% | |
| CATTGAAGCACACTAAACTC+TGG | - | chr2_4:60376290-60376309 | None:intergenic | 40.0% | |
| !! | TGTTATTTGGCCTTGTTTCC+GGG | + | chr2_4:60376653-60376672 | Msa0339290:intron | 40.0% |
| CAAAGAATAACCCGGAAACA+AGG | - | chr2_4:60376666-60376685 | None:intergenic | 40.0% | |
| TGAAAATGAGTAGCTGTGAG+TGG | + | chr2_4:60376725-60376744 | Msa0339290:intron | 40.0% | |
| CTCTTAGTTACAAACGAGGT+TGG | + | chr2_4:60376895-60376914 | Msa0339290:CDS | 40.0% | |
| AAGTGCTTGGATCAAAACAG+TGG | - | chr2_4:60377010-60377029 | None:intergenic | 40.0% | |
| ATATAACAGAGGAGTGAGAG+TGG | - | chr2_4:60377069-60377088 | None:intergenic | 40.0% | |
| GTATCATATTAGTAGACGGG+AGG | + | chr2_4:60377409-60377428 | Msa0339290:three_prime_UTR | 40.0% | |
| ATGATGCATGTTCAACAGAC+AGG | - | chr2_4:60377459-60377478 | None:intergenic | 40.0% | |
| ! | GGAAGAAAGAAGGGTTAGTG+CGG | - | chr2_4:60371773-60371792 | None:intergenic | 45.0% |
| GTGATTCTCCGTTGCGAATT+AGG | + | chr2_4:60371891-60371910 | Msa0339290:five_prime_UTR | 45.0% | |
| GATTCTCCGTTGCGAATTAG+GGG | + | chr2_4:60371893-60371912 | Msa0339290:five_prime_UTR | 45.0% | |
| !! | CAGGTTGTTGATTGGTTTCG+AGG | + | chr2_4:60372059-60372078 | Msa0339290:intron | 45.0% |
| GGCAAGAAACAGGGCATAAA+GGG | - | chr2_4:60372173-60372192 | None:intergenic | 45.0% | |
| GCCGATACTCTATAAGGACA+AGG | + | chr2_4:60372568-60372587 | Msa0339290:intron | 45.0% | |
| GCCGATACTCTATAAGGACA+AGG | + | chr2_4:60372568-60372587 | Msa0339290:intron | 45.0% | |
| ! | AGTGTGCTGATAAATTGGGG+AGG | - | chr2_4:60373198-60373217 | None:intergenic | 45.0% |
| TCCCCAATTTATCAGCACAC+TGG | + | chr2_4:60373197-60373216 | Msa0339290:CDS | 45.0% | |
| CACTGGTGTGAATACTTTGC+TGG | + | chr2_4:60373214-60373233 | Msa0339290:intron | 45.0% | |
| ! | AATCGCTACCTTTTTGCTGC+AGG | + | chr2_4:60373274-60373293 | Msa0339290:intron | 45.0% |
| GAATACCACCTGCAGCAAAA+AGG | - | chr2_4:60373285-60373304 | None:intergenic | 45.0% | |
| ! | TTTTGCTGCAGGTGGTATTC+AGG | + | chr2_4:60373285-60373304 | Msa0339290:intron | 45.0% |
| TTTGCTGCAGGTGGTATTCA+GGG | + | chr2_4:60373286-60373305 | Msa0339290:intron | 45.0% | |
| GTAAGTGTACTGGGCATGTT+GGG | - | chr2_4:60373343-60373362 | None:intergenic | 45.0% | |
| TGTAAGTGTACTGGGCATGT+TGG | - | chr2_4:60373344-60373363 | None:intergenic | 45.0% | |
| CTATCTCATGGAAGCTCTCA+TGG | + | chr2_4:60373615-60373634 | Msa0339290:CDS | 45.0% | |
| CATTCAGGAGTCAACAGTAG+AGG | + | chr2_4:60373639-60373658 | Msa0339290:CDS | 45.0% | |
| !! | GAGTTGCTGGTTCTATTCCT+GGG | + | chr2_4:60373709-60373728 | Msa0339290:CDS | 45.0% |
| CTTCCATCTTCTGCTGCAAT+TGG | + | chr2_4:60373735-60373754 | Msa0339290:CDS | 45.0% | |
| CCAATCCTGGAACAGCATTA+CGG | - | chr2_4:60373764-60373783 | None:intergenic | 45.0% | |
| CGTAATGCTGTTCCAGGATT+GGG | + | chr2_4:60373762-60373781 | Msa0339290:intron | 45.0% | |
| !! | TCCCCAATTTTGGGAAATGC+AGG | + | chr2_4:60373789-60373808 | Msa0339290:intron | 45.0% |
| GGACCTGCATTTCCCAAAAT+TGG | - | chr2_4:60373795-60373814 | None:intergenic | 45.0% | |
| !! | TTTTGGGAAATGCAGGTCCT+CGG | + | chr2_4:60373796-60373815 | Msa0339290:intron | 45.0% |
| !! | CCCATAGAACTTGTTATCCG+AGG | - | chr2_4:60373816-60373835 | None:intergenic | 45.0% |
| TCTATGGGAAACATGGTTGC+TGG | + | chr2_4:60373828-60373847 | Msa0339290:CDS | 45.0% | |
| CTATGGGAAACATGGTTGCT+GGG | + | chr2_4:60373829-60373848 | Msa0339290:CDS | 45.0% | |
| TATGGGAAACATGGTTGCTG+GGG | + | chr2_4:60373830-60373849 | Msa0339290:CDS | 45.0% | |
| AACATTGGGAGGATAAGCTC+TGG | + | chr2_4:60373855-60373874 | Msa0339290:CDS | 45.0% | |
| TGGTCGTCACAAGTGCATTA+AGG | + | chr2_4:60374001-60374020 | Msa0339290:intron | 45.0% | |
| GGAAATTCTTATCCCAGTGC+TGG | + | chr2_4:60374472-60374491 | Msa0339290:CDS | 45.0% | |
| ! | AATTCTTATCCCAGTGCTGG+AGG | + | chr2_4:60374475-60374494 | Msa0339290:CDS | 45.0% |
| GGGAAGTCATTGAGGTCAAA+GGG | - | chr2_4:60374586-60374605 | None:intergenic | 45.0% | |
| AGGGAAGTCATTGAGGTCAA+AGG | - | chr2_4:60374587-60374606 | None:intergenic | 45.0% | |
| TTAGCTGAGGGAAGTCATTG+AGG | - | chr2_4:60374594-60374613 | None:intergenic | 45.0% | |
| !! | TAGGACGACTTGTTAGCTGA+GGG | - | chr2_4:60374606-60374625 | None:intergenic | 45.0% |
| GAAGACTTTCCAGCTTTACC+CGG | + | chr2_4:60374801-60374820 | Msa0339290:CDS | 45.0% | |
| ! | AGAGGTTAGTCAGTTGGCTT+TGG | + | chr2_4:60375316-60375335 | Msa0339290:intron | 45.0% |
| CTGTGACTGCATCATTGACA+TGG | - | chr2_4:60375430-60375449 | None:intergenic | 45.0% | |
| TATTCTTTCTGCAGATGGGG+AGG | + | chr2_4:60375555-60375574 | Msa0339290:intron | 45.0% | |
| !! | AGGTCTGCTGGTTTCAGTTT+GGG | + | chr2_4:60375575-60375594 | Msa0339290:CDS | 45.0% |
| TCTCCTTCTGTCAGTAACAG+CGG | + | chr2_4:60375635-60375654 | Msa0339290:CDS | 45.0% | |
| CCCGTACCAGAAACAGTATT+TGG | - | chr2_4:60375960-60375979 | None:intergenic | 45.0% | |
| !! | TCTGGTGTTGTTGATACTGC+TGG | - | chr2_4:60376001-60376020 | None:intergenic | 45.0% |
| ! | TTACAGCTGACATTTGCTGG+AGG | - | chr2_4:60376040-60376059 | None:intergenic | 45.0% |
| CTTCATGCCATGATCCCTAA+AGG | - | chr2_4:60376069-60376088 | None:intergenic | 45.0% | |
| CAATCTGCTCCTGATCCATT+TGG | + | chr2_4:60376104-60376123 | Msa0339290:CDS | 45.0% | |
| AACAAGCCAAGCAGACCAAA+TGG | - | chr2_4:60376122-60376141 | None:intergenic | 45.0% | |
| AGAGCAAGAGATGTCAGATC+AGG | - | chr2_4:60376167-60376186 | None:intergenic | 45.0% | |
| GATCTGACATCTCTTGCTCT+TGG | + | chr2_4:60376167-60376186 | Msa0339290:CDS | 45.0% | |
| !! | ACAAGACTTTTGGGTCTCCT+TGG | + | chr2_4:60376240-60376259 | Msa0339290:CDS | 45.0% |
| !! | ATCACAAAGAGCATCGCATG+TGG | + | chr2_4:60376922-60376941 | Msa0339290:CDS | 45.0% |
| CAAGCACTTTCGAAACTGTC+CGG | + | chr2_4:60377021-60377040 | Msa0339290:CDS | 45.0% | |
| CCTCAATGTTGTGGCAAAGA+CGG | - | chr2_4:60377200-60377219 | None:intergenic | 45.0% | |
| CTATCTGCTCCTCAATGTTG+TGG | - | chr2_4:60377209-60377228 | None:intergenic | 45.0% | |
| AGGAACAGAACAGCTAGGTT+AGG | - | chr2_4:60377439-60377458 | None:intergenic | 45.0% | |
| ! | AGAAAGAAGGGTTAGTGCGG+TGG | - | chr2_4:60371770-60371789 | None:intergenic | 50.0% |
| AAACCACCGCGTTCTCTTGT+CGG | + | chr2_4:60371847-60371866 | Msa0339290:five_prime_UTR | 50.0% | |
| TTCTCTTGTCGGAGACTCGT+AGG | + | chr2_4:60371858-60371877 | Msa0339290:five_prime_UTR | 50.0% | |
| GGGCAAGAAACAGGGCATAA+AGG | - | chr2_4:60372174-60372193 | None:intergenic | 50.0% | |
| GCCGATACCGTATAAGCACA+AGG | + | chr2_4:60372700-60372719 | Msa0339290:intron | 50.0% | |
| TCAAATCTTCCAGACGGTGC+TGG | + | chr2_4:60373134-60373153 | Msa0339290:CDS | 50.0% | |
| CAAATCTTCCAGACGGTGCT+GGG | + | chr2_4:60373135-60373154 | Msa0339290:CDS | 50.0% | |
| TTGCTGCAGGTGGTATTCAG+GGG | + | chr2_4:60373287-60373306 | Msa0339290:intron | 50.0% | |
| TCTTCCTTCTGCTCTGTCAC+AGG | + | chr2_4:60373453-60373472 | Msa0339290:CDS | 50.0% | |
| TGTACCTGTGACAGAGCAGA+AGG | - | chr2_4:60373460-60373479 | None:intergenic | 50.0% | |
| GGAAGCTCTCATGGACATTC+AGG | + | chr2_4:60373624-60373643 | Msa0339290:CDS | 50.0% | |
| TCAGGAGTCAACAGTAGAGG+AGG | + | chr2_4:60373642-60373661 | Msa0339290:CDS | 50.0% | |
| !! | GGAGTTGCTGGTTCTATTCC+TGG | + | chr2_4:60373708-60373727 | Msa0339290:CDS | 50.0% |
| GCAGAAGATGGAAGAATCCC+AGG | - | chr2_4:60373729-60373748 | None:intergenic | 50.0% | |
| GGTAACCGTAATGCTGTTCC+AGG | + | chr2_4:60373756-60373775 | Msa0339290:intron | 50.0% | |
| CCGTAATGCTGTTCCAGGAT+TGG | + | chr2_4:60373761-60373780 | Msa0339290:intron | 50.0% | |
| ATTGGGGATACTCCCAATCC+TGG | - | chr2_4:60373777-60373796 | None:intergenic | 50.0% | |
| ATGGGAAACATGGTTGCTGG+GGG | + | chr2_4:60373831-60373850 | Msa0339290:CDS | 50.0% | |
| ! | ATTGGGAGGATAAGCTCTGG+AGG | + | chr2_4:60373858-60373877 | Msa0339290:CDS | 50.0% |
| TCTGGAGGATTGTCCATTCC+TGG | + | chr2_4:60373873-60373892 | Msa0339290:CDS | 50.0% | |
| CTGGAGGATTGTCCATTCCT+GGG | + | chr2_4:60373874-60373893 | Msa0339290:CDS | 50.0% | |
| TTTAGACGTGAAGCAAGCCC+AGG | - | chr2_4:60373894-60373913 | None:intergenic | 50.0% | |
| AATGGAAACAGCGGATCTGG+TGG | + | chr2_4:60373918-60373937 | Msa0339290:CDS | 50.0% | |
| ATGAGTGGTGTGCTTCCACA+AGG | + | chr2_4:60373969-60373988 | Msa0339290:CDS | 50.0% | |
| GTCAAAGGGTGAACTGTCAC+TGG | - | chr2_4:60374572-60374591 | None:intergenic | 50.0% | |
| !! | CTAGGACGACTTGTTAGCTG+AGG | - | chr2_4:60374607-60374626 | None:intergenic | 50.0% |
| !! | ACAAGTCGTCCTAGTTCTGC+TGG | + | chr2_4:60374613-60374632 | Msa0339290:CDS | 50.0% |
| !! | CAAGTCGTCCTAGTTCTGCT+GGG | + | chr2_4:60374614-60374633 | Msa0339290:CDS | 50.0% |
| !! | AAGTCGTCCTAGTTCTGCTG+GGG | + | chr2_4:60374615-60374634 | Msa0339290:CDS | 50.0% |
| CCTTTGTATCCGGGTAAAGC+TGG | - | chr2_4:60374813-60374832 | None:intergenic | 50.0% | |
| CCAGCTTTACCCGGATACAA+AGG | + | chr2_4:60374810-60374829 | Msa0339290:CDS | 50.0% | |
| !! | GAGGTCTGCTGGTTTCAGTT+TGG | + | chr2_4:60375574-60375593 | Msa0339290:CDS | 50.0% |
| !! | TCTGCTGGTTTCAGTTTGGG+AGG | + | chr2_4:60375578-60375597 | Msa0339290:CDS | 50.0% |
| GAAGGAGAATGCTGCTGTTG+AGG | - | chr2_4:60375623-60375642 | None:intergenic | 50.0% | |
| ! | GACCTCCTGGCATTGGATTA+AGG | + | chr2_4:60375922-60375941 | Msa0339290:CDS | 50.0% |
| AGAGGCCTTAATCCAATGCC+AGG | - | chr2_4:60375930-60375949 | None:intergenic | 50.0% | |
| ! | CATTTGCTGGAGGCGAAACT+GGG | - | chr2_4:60376030-60376049 | None:intergenic | 50.0% |
| ! | ACATTTGCTGGAGGCGAAAC+TGG | - | chr2_4:60376031-60376050 | None:intergenic | 50.0% |
| CCAAGCAGACCAAATGGATC+AGG | - | chr2_4:60376116-60376135 | None:intergenic | 50.0% | |
| CCTGATCCATTTGGTCTGCT+TGG | + | chr2_4:60376113-60376132 | Msa0339290:CDS | 50.0% | |
| !! | TTTTGGGTCTCCTTGGTCTG+AGG | + | chr2_4:60376247-60376266 | Msa0339290:CDS | 50.0% |
| ! | TTAGCTGGTTCCTCAGACCA+AGG | - | chr2_4:60376260-60376279 | None:intergenic | 50.0% |
| TTGGTCTGAGGAACCAGCTA+AGG | + | chr2_4:60376259-60376278 | Msa0339290:CDS | 50.0% | |
| TGGTCTGAGGAACCAGCTAA+GGG | + | chr2_4:60376260-60376279 | Msa0339290:CDS | 50.0% | |
| AACTCTGGATCACCCTTAGC+TGG | - | chr2_4:60376275-60376294 | None:intergenic | 50.0% | |
| GAATGTCTCACGTGTAGAGC+AGG | - | chr2_4:60376332-60376351 | None:intergenic | 50.0% | |
| TTGACAAGCGGCTCCATGTT+GGG | - | chr2_4:60376960-60376979 | None:intergenic | 50.0% | |
| TTTGACAAGCGGCTCCATGT+TGG | - | chr2_4:60376961-60376980 | None:intergenic | 50.0% | |
| !! | CGGACAGTTTCGAAAGTGCT+TGG | - | chr2_4:60377023-60377042 | None:intergenic | 50.0% |
| CACTTTCGAAACTGTCCGGA+GGG | + | chr2_4:60377025-60377044 | Msa0339290:CDS | 50.0% | |
| GTTCACAGAAACTCACCCTC+CGG | - | chr2_4:60377043-60377062 | None:intergenic | 50.0% | |
| CCGTCTTTGCCACAACATTG+AGG | + | chr2_4:60377197-60377216 | Msa0339290:CDS | 50.0% | |
| GACAAGATAACAGCTCTCGG+TGG | - | chr2_4:60377374-60377393 | None:intergenic | 50.0% | |
| GGCGACAAGATAACAGCTCT+CGG | - | chr2_4:60377377-60377396 | None:intergenic | 50.0% | |
| CAGACAGGAACAGAACAGCT+AGG | - | chr2_4:60377444-60377463 | None:intergenic | 50.0% | |
| ! | GGGTTAGTGCGGTGGTGAAA+AGG | - | chr2_4:60371762-60371781 | None:intergenic | 55.0% |
| CGACGAGTTTCCGGTGAAGA+CGG | - | chr2_4:60371826-60371845 | None:intergenic | 55.0% | |
| CGTCTTCACCGGAAACTCGT+CGG | + | chr2_4:60371824-60371843 | Msa0339290:five_prime_UTR | 55.0% | |
| GGTGGTTTCCGACGAGTTTC+CGG | - | chr2_4:60371835-60371854 | None:intergenic | 55.0% | |
| GAGTCTCCGACAAGAGAACG+CGG | - | chr2_4:60371856-60371875 | None:intergenic | 55.0% | |
| TTGTCGGAGACTCGTAGGCT+AGG | + | chr2_4:60371863-60371882 | Msa0339290:five_prime_UTR | 55.0% | |
| TGTCGGAGACTCGTAGGCTA+GGG | + | chr2_4:60371864-60371883 | Msa0339290:five_prime_UTR | 55.0% | |
| ! | CGCTACCTTTTTGCTGCAGG+TGG | + | chr2_4:60373277-60373296 | Msa0339290:intron | 55.0% |
| CAGGGGTTGCACAACATGCA+TGG | + | chr2_4:60373304-60373323 | Msa0339290:CDS | 55.0% | |
| GGTTGTTGAACCGCTCCAGT+TGG | - | chr2_4:60373394-60373413 | None:intergenic | 55.0% | |
| TGGGAAACATGGTTGCTGGG+GGG | + | chr2_4:60373832-60373851 | Msa0339290:CDS | 55.0% | |
| ATGGTTGCTGGGGGGAACAT+TGG | + | chr2_4:60373840-60373859 | Msa0339290:CDS | 55.0% | |
| TGGTTGCTGGGGGGAACATT+GGG | + | chr2_4:60373841-60373860 | Msa0339290:CDS | 55.0% | |
| ACGTGAAGCAAGCCCAGGAA+TGG | - | chr2_4:60373889-60373908 | None:intergenic | 55.0% | |
| AACAGCGGATCTGGTGGCTT+AGG | + | chr2_4:60373924-60373943 | Msa0339290:CDS | 55.0% | |
| GAAAGTGGACCTCCAGCACT+GGG | - | chr2_4:60374487-60374506 | None:intergenic | 55.0% | |
| TGAAAGTGGACCTCCAGCAC+TGG | - | chr2_4:60374488-60374507 | None:intergenic | 55.0% | |
| !! | AGTCGTCCTAGTTCTGCTGG+GGG | + | chr2_4:60374616-60374635 | Msa0339290:CDS | 55.0% |
| AAGGACAGTTGGGTGCGTGA+TGG | + | chr2_4:60374644-60374663 | Msa0339290:intron | 55.0% | |
| ACGCCGCTGTTACTGACAGA+AGG | - | chr2_4:60375641-60375660 | None:intergenic | 55.0% | |
| ! | GTTTAGACTAGCGGACCTCC+TGG | + | chr2_4:60375909-60375928 | Msa0339290:intron | 55.0% |
| GGCCTTAATCCAATGCCAGG+AGG | - | chr2_4:60375927-60375946 | None:intergenic | 55.0% | |
| !! | GGCGAAACTGGGATTGGTTC+TGG | - | chr2_4:60376019-60376038 | None:intergenic | 55.0% |
| TGTCTCACGTGTAGAGCAGG+AGG | - | chr2_4:60376329-60376348 | None:intergenic | 55.0% | |
| GCACTTTCGAAACTGTCCGG+AGG | + | chr2_4:60377024-60377043 | Msa0339290:CDS | 55.0% | |
| TCTCCGACAAGAGAACGCGG+TGG | - | chr2_4:60371853-60371872 | None:intergenic | 60.0% | |
| ! | ATCTTCCAGACGGTGCTGGG+CGG | + | chr2_4:60373138-60373157 | Msa0339290:CDS | 60.0% |
| TTGCTGGGGGGAACATTGGG+AGG | + | chr2_4:60373844-60373863 | Msa0339290:CDS | 60.0% | |
| TCTGGTGGCTTAGGCGTGCA+AGG | + | chr2_4:60373933-60373952 | Msa0339290:CDS | 60.0% | |
| !! | GTCGTCCTAGTTCTGCTGGG+GGG | + | chr2_4:60374617-60374636 | Msa0339290:CDS | 60.0% |
| CACGCACCCAACTGTCCTTG+AGG | - | chr2_4:60374643-60374662 | None:intergenic | 60.0% | |
| ! | ACTAGCGGACCTCCTGGCAT+TGG | + | chr2_4:60375915-60375934 | Msa0339290:CDS | 60.0% |
| GCTGGAGGCGAAACTGGGAT+TGG | - | chr2_4:60376025-60376044 | None:intergenic | 60.0% | |
| CTCACGTGTAGAGCAGGAGG+TGG | - | chr2_4:60376326-60376345 | None:intergenic | 60.0% | |
| AAAGTCCGCCCAGCACCGTC+TGG | - | chr2_4:60373146-60373165 | None:intergenic | 65.0% | |
| TGAGGCCCCCCAGCAGAACT+AGG | - | chr2_4:60374625-60374644 | None:intergenic | 65.0% | |
| AGTTCTGCTGGGGGGCCTCA+AGG | + | chr2_4:60374625-60374644 | Msa0339290:CDS | 65.0% | |
| TGGGGGGCCTCAAGGACAGT+TGG | + | chr2_4:60374633-60374652 | Msa0339290:CDS | 65.0% | |
| GGGGGGCCTCAAGGACAGTT+GGG | + | chr2_4:60374634-60374653 | Msa0339290:CDS | 65.0% | |
| CTGCAGATGGGGAGGTCTGC+TGG | + | chr2_4:60375563-60375582 | Msa0339290:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 60371689 | 60377536 | 60371689 | ID=Msa0339290;Name=Msa0339290 |
| chr2_4 | mRNA | 60371689 | 60377536 | 60371689 | ID=Msa0339290-mRNA-1;Parent=Msa0339290;Name=Msa0339290-mRNA-1;_AED=0.15;_eAED=0.15;_QI=376|0.78|0.66|1|0.5|0.4|15|319|633 |
| chr2_4 | exon | 60371689 | 60371979 | 60371689 | ID=Msa0339290-mRNA-1:exon:18734;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60372062 | 60372164 | 60372062 | ID=Msa0339290-mRNA-1:exon:18735;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60373113 | 60373218 | 60373113 | ID=Msa0339290-mRNA-1:exon:18736;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60373296 | 60373474 | 60373296 | ID=Msa0339290-mRNA-1:exon:18737;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60373615 | 60373762 | 60373615 | ID=Msa0339290-mRNA-1:exon:18738;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60373811 | 60373990 | 60373811 | ID=Msa0339290-mRNA-1:exon:18739;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60374446 | 60374655 | 60374446 | ID=Msa0339290-mRNA-1:exon:18740;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60374736 | 60374831 | 60374736 | ID=Msa0339290-mRNA-1:exon:18741;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60375370 | 60375458 | 60375370 | ID=Msa0339290-mRNA-1:exon:18742;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60375569 | 60375745 | 60375569 | ID=Msa0339290-mRNA-1:exon:18743;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60375915 | 60376138 | 60375915 | ID=Msa0339290-mRNA-1:exon:18744;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60376154 | 60376340 | 60376154 | ID=Msa0339290-mRNA-1:exon:18745;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60376427 | 60376478 | 60376427 | ID=Msa0339290-mRNA-1:exon:18746;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60376871 | 60377046 | 60376871 | ID=Msa0339290-mRNA-1:exon:18747;Parent=Msa0339290-mRNA-1 |
| chr2_4 | exon | 60377158 | 60377536 | 60377158 | ID=Msa0339290-mRNA-1:exon:18748;Parent=Msa0339290-mRNA-1 |
| chr2_4 | five_prime_UTR | 60371689 | 60371979 | 60371689 | ID=Msa0339290-mRNA-1:five_prime_utr;Parent=Msa0339290-mRNA-1 |
| chr2_4 | five_prime_UTR | 60372062 | 60372146 | 60372062 | ID=Msa0339290-mRNA-1:five_prime_utr;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60372147 | 60372164 | 60372147 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60373113 | 60373218 | 60373113 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60373296 | 60373474 | 60373296 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60373615 | 60373762 | 60373615 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60373811 | 60373990 | 60373811 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60374446 | 60374655 | 60374446 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60374736 | 60374831 | 60374736 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60375370 | 60375458 | 60375370 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60375569 | 60375745 | 60375569 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60375915 | 60376138 | 60375915 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60376154 | 60376340 | 60376154 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60376427 | 60376478 | 60376427 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60376871 | 60377046 | 60376871 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | CDS | 60377158 | 60377217 | 60377158 | ID=Msa0339290-mRNA-1:cds;Parent=Msa0339290-mRNA-1 |
| chr2_4 | three_prime_UTR | 60377218 | 60377536 | 60377218 | ID=Msa0339290-mRNA-1:three_prime_utr;Parent=Msa0339290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
