AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0347710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0347710 MtrunA17_Chr3g0080101 98.628 802 11 0 1 802 1 802 0.0 1629
Msa0347710 MtrunA17_Chr7g0266031 50.794 882 348 19 1 802 1 876 0.0 742
Msa0347710 MtrunA17_Chr1g0179101 69.892 465 132 5 342 802 399 859 0.0 666
Msa0347710 MtrunA17_Chr2g0290691 58.650 474 182 6 342 802 132 604 0.0 569
Msa0347710 MtrunA17_Chr7g0250631 62.785 395 133 5 379 769 331 715 1.87e-178 531
Msa0347710 MtrunA17_Chr7g0227331 61.485 431 157 5 345 769 163 590 4.60e-178 525
Msa0347710 MtrunA17_Chr6g0449401 54.959 484 159 8 337 769 176 651 2.69e-176 523
Msa0347710 MtrunA17_Chr8g0335351 63.613 393 130 5 379 767 337 720 3.38e-175 523
Msa0347710 MtrunA17_Chr2g0309421 56.236 441 170 8 354 787 116 540 1.60e-159 476
Msa0347710 MtrunA17_Chr8g0356291 51.173 469 195 9 356 802 68 524 2.66e-153 458
Msa0347710 MtrunA17_Chr4g0063311 50.627 399 176 8 387 768 63 457 2.80e-134 407
Msa0347710 MtrunA17_Chr2g0321101 53.050 377 152 6 398 761 70 434 1.48e-129 394
Msa0347710 MtrunA17_Chr8g0381091 49.367 395 161 10 390 768 52 423 6.99e-121 372
Msa0347710 MtrunA17_Chr2g0285711 47.980 396 168 9 390 771 57 428 4.83e-120 369
Msa0347710 MtrunA17_Chr2g0312641 46.005 413 176 10 370 767 39 419 1.82e-114 356
Msa0347710 MtrunA17_Chr2g0327561 46.032 378 165 2 390 767 601 939 1.87e-107 352
Msa0347710 MtrunA17_Chr4g0030361 44.180 378 161 3 390 767 282 609 7.62e-105 336
Msa0347710 MtrunA17_Chr8g0369091 44.709 378 162 3 390 767 572 902 1.19e-103 340
Msa0347710 MtrunA17_Chr4g0032761 38.060 402 211 11 412 792 10 394 3.63e-76 253
Msa0347710 MtrunA17_Chr2g0329011 38.692 367 184 7 411 774 11 339 1.42e-75 250
Msa0347710 MtrunA17_Chr8g0338741 38.043 368 196 11 412 768 15 361 4.17e-70 237
Msa0347710 MtrunA17_Chr7g0234641 35.389 373 207 9 409 769 3 353 5.97e-67 228
Msa0347710 MtrunA17_Chr5g0428981 34.302 344 178 5 414 756 760 1056 2.41e-55 207
Msa0347710 MtrunA17_Chr4g0018201 34.012 344 179 5 414 756 756 1052 4.50e-55 206
Msa0347710 MtrunA17_Chr6g0478601 35.191 341 174 6 417 756 111 405 2.89e-54 196
Msa0347710 MtrunA17_Chr3g0135951 32.081 346 196 9 417 756 94 406 1.49e-46 174
Msa0347710 MtrunA17_Chr1g0153321 29.805 359 210 7 405 759 96 416 2.24e-44 167
Msa0347710 MtrunA17_Chr1g0187581 30.238 420 229 14 359 767 69 435 1.00e-41 160
Msa0347710 MtrunA17_Chr1g0183651 29.459 370 221 6 405 772 108 439 5.76e-41 159
Msa0347710 MtrunA17_Chr2g0299781 30.814 344 203 8 417 756 113 425 1.73e-40 156
Msa0347710 MtrunA17_Chr1g0167351 27.409 467 287 12 320 772 3 431 2.19e-40 156
Msa0347710 MtrunA17_Chr7g0261491 30.000 360 204 9 405 756 108 427 1.32e-39 155
Msa0347710 MtrunA17_Chr1g0167311 29.189 370 223 9 405 772 103 435 4.38e-39 152
Msa0347710 MtrunA17_Chr1g0197721 37.791 172 97 3 401 572 38 199 9.25e-28 118
Msa0347710 MtrunA17_Chr1g0197721 35.099 151 92 3 638 784 203 351 1.67e-13 73.9
Msa0347710 MtrunA17_Chr7g0245031 37.500 168 95 4 404 564 129 293 1.89e-26 114
Msa0347710 MtrunA17_Chr7g0245031 45.238 126 64 3 647 771 301 422 2.15e-23 104
Msa0347710 MtrunA17_Chr4g0059751 39.241 158 81 5 417 564 89 241 4.58e-26 112
Msa0347710 MtrunA17_Chr4g0059751 40.000 140 73 4 647 785 249 378 1.90e-23 103
Msa0347710 MtrunA17_Chr3g0125381 44.144 111 58 1 642 752 101 207 2.08e-24 102
Msa0347710 MtrunA17_Chr3g0125381 32.231 121 69 2 467 587 2 109 1.35e-11 65.1
Msa0347710 MtrunA17_Chr8g0351491 27.666 347 168 9 406 752 5 268 1.87e-22 98.2
Msa0347710 MtrunA17_Chr3g0140631 33.523 176 115 1 390 565 10 183 8.95e-21 94.0
Msa0347710 MtrunA17_Chr8g0379091 25.784 287 137 5 411 696 20 231 1.42e-19 93.2
Msa0347710 MtrunA17_Chr2g0284031 25.784 287 137 5 406 691 20 231 4.88e-19 91.3
Msa0347710 MtrunA17_Chr1g0205421 35.625 160 96 3 407 564 2 156 7.95e-19 90.1
Msa0347710 MtrunA17_Chr4g0013131 30.380 158 107 1 407 564 2 156 1.91e-18 89.4
Msa0347710 MtrunA17_Chr8g0353621 41.346 104 57 1 647 750 161 260 7.61e-18 84.7
Msa0347710 MtrunA17_Chr8g0353621 33.333 150 98 1 417 566 10 157 1.31e-17 84.0
Msa0347710 MtrunA17_Chr3g0107011 30.519 154 104 1 411 564 8 158 1.18e-17 86.7
Msa0347710 MtrunA17_Chr3g0114511 32.258 155 100 1 410 564 25 174 2.03e-17 85.9
Msa0347710 MtrunA17_Chr7g0244521 30.968 155 104 1 410 564 5 156 4.58e-17 84.7
Msa0347710 MtrunA17_Chr2g0304111 29.319 191 108 3 376 564 3 168 2.05e-16 82.8
Msa0347710 MtrunA17_Chr2g0286501 35.065 154 90 3 414 566 46 190 2.21e-16 84.3
Msa0347710 MtrunA17_Chr4g0074111 31.293 147 98 1 417 563 18 161 5.10e-16 80.9
Msa0347710 MtrunA17_Chr1g0188031 32.075 159 92 4 414 564 17 167 5.36e-16 81.3
Msa0347710 MtrunA17_Chr3g0107051 33.108 148 96 1 417 564 21 165 5.62e-16 81.3
Msa0347710 MtrunA17_Chr2g0302431 30.719 153 104 1 412 564 15 165 8.23e-16 80.9
Msa0347710 MtrunA17_Chr5g0432471 28.947 152 103 2 414 564 9 156 2.00e-15 79.7
Msa0347710 MtrunA17_Chr4g0001331 29.114 158 109 1 407 564 10 164 2.86e-15 79.3
Msa0347710 MtrunA17_Chr2g0284011 28.387 155 108 1 410 564 5 156 2.91e-15 79.0
Msa0347710 MtrunA17_Chr6g0453681 30.818 159 102 3 410 564 10 164 6.52e-15 78.2
Msa0347710 MtrunA17_Chr1g0150321 30.625 160 108 1 405 564 1 157 6.79e-15 77.8
Msa0347710 MtrunA17_Chr6g0486661 34.109 129 77 4 644 767 909 1034 7.46e-15 79.0
Msa0347710 MtrunA17_Chr6g0468751 30.818 159 102 3 410 564 10 164 9.10e-15 77.8
Msa0347710 MtrunA17_Chr3g0132591 38.776 147 80 3 423 568 118 255 1.46e-14 77.0
Msa0347710 MtrunA17_Chr3g0091311 32.075 159 97 4 410 564 5 156 1.57e-14 74.3
Msa0347710 MtrunA17_Chr5g0428031 27.703 148 105 1 417 564 9 154 2.04e-14 76.6
Msa0347710 MtrunA17_Chr7g0272841 32.653 147 92 3 423 564 74 218 3.04e-14 76.6
Msa0347710 MtrunA17_Chr5g0419441 31.373 153 100 3 417 568 239 387 3.73e-14 76.6
Msa0347710 MtrunA17_Chr5g0441011 29.054 148 103 1 417 564 13 158 4.26e-14 75.5
Msa0347710 MtrunA17_Chr8g0386981 32.639 144 93 2 423 564 414 555 4.50e-14 76.6
Msa0347710 MtrunA17_Chr8g0346071 27.703 148 105 1 417 564 17 162 4.98e-14 75.1
Msa0347710 MtrunA17_Chr1g0202831 30.556 144 96 2 423 564 417 558 7.72e-14 75.9
Msa0347710 MtrunA17_Chr8g0346081 26.351 148 107 1 417 564 17 162 1.01e-13 74.3
Msa0347710 MtrunA17_Chr4g0061141 32.749 171 106 5 399 564 85 251 1.88e-13 74.3
Msa0347710 MtrunA17_Chr8g0385341 33.987 153 95 3 417 565 30 180 2.06e-13 73.6
Msa0347710 MtrunA17_Chr1g0200601 34.839 155 93 4 416 565 29 180 2.62e-13 73.2
Msa0347710 MtrunA17_Chr3g0091281 30.220 182 105 6 410 576 5 179 4.36e-13 69.7
Msa0347710 MtrunA17_Chr3g0130151 32.192 146 91 3 423 564 250 391 4.66e-13 72.8
Msa0347710 MtrunA17_Chr1g0188991 23.611 360 184 12 413 767 11 284 4.67e-13 73.2
Msa0347710 MtrunA17_Chr1g0176751 34.746 118 64 4 649 764 283 389 5.99e-13 72.4
Msa0347710 MtrunA17_Chr1g0205931 32.000 150 95 3 423 567 61 208 6.03e-13 72.4
Msa0347710 MtrunA17_Chr3g0132671 29.787 188 96 5 410 564 10 194 6.48e-13 72.0
Msa0347710 MtrunA17_Chr1g0166101 28.947 152 105 2 414 564 21 170 7.60e-13 71.2
Msa0347710 MtrunA17_Chr2g0333821 28.931 159 110 1 406 564 3 158 9.55e-13 71.2
Msa0347710 MtrunA17_Chr5g0432491 31.081 148 100 1 417 564 23 168 1.13e-12 70.9
Msa0347710 MtrunA17_Chr8g0384301 31.613 155 100 4 413 564 295 446 2.20e-12 70.9
Msa0347710 MtrunA17_Chr6g0450571 30.968 155 101 4 412 564 11 161 2.87e-12 70.5
Msa0347710 MtrunA17_Chr7g0274941 34.579 107 63 3 647 750 171 273 2.87e-12 68.6
Msa0347710 MtrunA17_Chr7g0274941 28.947 152 103 3 412 561 11 159 3.63e-11 65.1
Msa0347710 MtrunA17_Chr4g0038501 27.632 152 109 1 417 568 20 170 4.84e-12 70.1
Msa0347710 MtrunA17_Chr4g0063881 28.472 144 101 1 421 564 15 156 5.07e-12 68.9
Msa0347710 MtrunA17_Chr8g0345801 31.783 129 85 2 422 550 20 145 5.27e-12 67.0
Msa0347710 MtrunA17_Chr5g0409421 27.500 160 107 4 414 571 1 153 6.79e-12 68.6
Msa0347710 MtrunA17_Chr2g0330211 30.201 149 101 2 417 564 18 164 8.15e-12 68.6
Msa0347710 MtrunA17_Chr2g0321841 27.922 154 105 3 414 564 1 151 9.97e-12 68.9
Msa0347710 MtrunA17_Chr3g0091421 29.375 160 102 4 409 564 4 156 1.03e-11 65.9
Msa0347710 MtrunA17_Chr4g0040141 32.667 150 96 4 417 564 129 275 1.08e-11 68.6
Msa0347710 MtrunA17_Chr2g0299991 27.670 206 140 5 360 564 17 214 1.13e-11 67.4
Msa0347710 MtrunA17_Chr7g0218071 31.250 176 114 5 399 570 100 272 1.23e-11 68.6
Msa0347710 MtrunA17_Chr6g0453711 29.379 177 116 6 399 570 90 262 1.39e-11 68.2
Msa0347710 MtrunA17_Chr3g0131861 31.788 151 96 5 417 564 97 243 1.41e-11 67.8
Msa0347710 MtrunA17_Chr1g0190831 27.273 154 106 3 414 564 1 151 1.50e-11 68.2
Msa0347710 MtrunA17_Chr1g0170551 32.075 106 66 2 650 755 162 261 1.56e-11 68.6
Msa0347710 MtrunA17_Chr4g0047191 31.148 122 82 1 445 564 73 194 1.67e-11 66.6
Msa0347710 MtrunA17_Chr4g0038091 27.632 152 109 1 417 568 20 170 2.14e-11 68.2
Msa0347710 MtrunA17_Chr4g0047211 31.148 122 82 1 445 564 68 189 2.34e-11 66.2
Msa0347710 MtrunA17_Chr4g0000431 28.000 150 104 3 416 564 23 169 2.65e-11 67.4
Msa0347710 MtrunA17_Chr2g0317501 31.126 151 97 5 417 564 134 280 2.75e-11 67.4
Msa0347710 MtrunA17_Chr2g0317001 30.065 153 101 4 417 568 15 162 3.64e-11 67.0
Msa0347710 MtrunA17_Chr3g0091291 35.514 107 60 3 462 564 3 104 4.73e-11 63.2
Msa0347710 MtrunA17_Chr1g0170281 29.940 167 108 5 404 565 106 268 4.73e-11 66.2
Msa0347710 MtrunA17_Chr1g0162301 30.667 150 88 4 409 550 10 151 7.87e-11 64.7
Msa0347710 MtrunA17_Chr1g0173541 32.051 156 100 3 414 565 49 202 8.01e-11 65.5
Msa0347710 MtrunA17_Chr6g0453671 28.758 153 103 2 414 564 16 164 8.11e-11 64.7
Msa0347710 MtrunA17_Chr4g0074811 31.847 157 97 5 415 565 89 241 9.71e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0347710 AT3G52890.2 66.173 473 147 6 341 802 464 934 0.0 636
Msa0347710 AT3G52890.2 40.000 130 56 5 40 149 50 177 8.91e-11 66.2
Msa0347710 AT3G52890.4 66.173 473 147 6 341 802 464 934 0.0 636
Msa0347710 AT3G52890.4 40.000 130 56 5 40 149 50 177 8.91e-11 66.2
Msa0347710 AT3G52890.1 66.173 473 147 6 341 802 464 934 0.0 636
Msa0347710 AT3G52890.1 40.000 130 56 5 40 149 50 177 8.91e-11 66.2
Msa0347710 AT3G52890.3 66.173 473 147 6 341 802 464 934 0.0 636
Msa0347710 AT3G52890.3 40.000 130 56 5 40 149 50 177 8.91e-11 66.2
Msa0347710 AT2G36350.1 64.807 466 153 4 346 802 486 949 0.0 613
Msa0347710 AT2G36350.1 34.783 161 76 4 1 132 1 161 2.62e-14 77.8
Msa0347710 AT5G03640.2 57.326 546 192 10 282 802 397 926 0.0 596
Msa0347710 AT5G03640.1 57.326 546 192 10 282 802 397 926 0.0 596
Msa0347710 AT5G47750.1 61.135 458 165 6 356 802 131 586 0.0 558
Msa0347710 AT4G26610.1 58.197 488 185 10 290 773 6 478 0.0 542
Msa0347710 AT5G55910.2 58.225 462 186 6 346 802 39 498 0.0 528
Msa0347710 AT5G55910.1 58.225 462 186 6 346 802 39 498 0.0 528
Msa0347710 AT2G44830.2 54.581 513 195 11 279 769 219 715 3.27e-175 523
Msa0347710 AT2G44830.3 54.581 513 195 11 279 769 219 715 3.27e-175 523
Msa0347710 AT2G44830.1 54.581 513 195 11 279 769 219 715 3.27e-175 523
Msa0347710 AT3G27580.2 60.714 392 138 6 387 769 150 534 1.22e-166 494
Msa0347710 AT3G27580.1 60.714 392 138 6 387 769 150 534 1.22e-166 494
Msa0347710 AT3G12690.1 48.619 543 250 5 249 788 30 546 4.86e-166 493
Msa0347710 AT3G12690.3 48.619 543 250 5 249 788 30 546 4.86e-166 493
Msa0347710 AT3G12690.2 48.619 543 250 5 249 788 30 546 4.86e-166 493
Msa0347710 AT5G40030.1 61.979 384 134 8 390 769 86 461 3.10e-159 473
Msa0347710 AT1G79250.1 57.073 410 164 4 381 782 110 515 8.11e-159 474
Msa0347710 AT1G79250.3 57.073 410 164 4 381 782 110 515 8.11e-159 474
Msa0347710 AT1G79250.2 57.073 410 164 4 381 782 110 515 8.11e-159 474
Msa0347710 AT1G79250.4 57.073 410 164 4 381 782 110 515 8.11e-159 474
Msa0347710 AT1G16440.1 57.254 386 150 4 390 773 86 458 5.23e-150 449
Msa0347710 AT2G26700.1 44.643 448 199 7 369 769 38 483 1.80e-127 392
Msa0347710 AT2G34650.1 50.370 405 162 8 372 768 38 411 2.94e-127 388
Msa0347710 AT3G44610.1 53.973 365 136 7 417 761 71 423 5.81e-127 387
Msa0347710 AT5G58140.6 43.596 406 173 5 391 795 551 901 2.24e-108 353
Msa0347710 AT5G58140.7 43.596 406 173 5 391 795 551 901 2.24e-108 353
Msa0347710 AT5G58140.5 43.596 406 173 5 391 795 551 901 2.24e-108 353
Msa0347710 AT5G58140.2 43.596 406 173 5 391 795 551 901 2.24e-108 353
Msa0347710 AT5G58140.1 43.596 406 173 5 391 795 551 901 2.24e-108 353
Msa0347710 AT3G14370.1 46.094 384 165 6 392 766 61 411 4.84e-108 339
Msa0347710 AT5G58140.3 44.865 370 157 3 391 760 551 873 1.08e-105 345
Msa0347710 AT3G45780.2 41.439 403 183 4 390 792 636 985 6.62e-100 332
Msa0347710 AT3G45780.1 41.439 403 183 4 390 792 636 985 6.62e-100 332
Msa0347710 AT1G53700.1 44.648 383 173 8 392 767 66 416 8.52e-99 315
Msa0347710 AT1G51170.1 39.314 379 184 11 411 774 16 363 3.60e-75 250
Msa0347710 AT3G20830.1 39.153 378 186 11 412 774 16 364 3.30e-71 239
Msa0347710 AT4G13000.1 37.845 362 184 9 412 768 15 340 2.05e-70 236
Msa0347710 AT3G25250.1 33.753 397 224 6 406 793 6 372 2.12e-66 227
Msa0347710 AT5G62310.1 33.504 391 201 9 414 795 751 1091 2.13e-54 204
Msa0347710 AT1G45160.2 33.744 406 204 10 412 802 665 1020 2.15e-54 204
Msa0347710 AT1G45160.1 35.655 359 177 8 412 766 665 973 3.85e-54 203
Msa0347710 AT1G48490.3 34.971 346 172 6 412 756 823 1116 4.58e-53 200
Msa0347710 AT1G48490.2 34.971 346 172 6 412 756 823 1116 4.58e-53 200
Msa0347710 AT1G48490.1 34.971 346 172 6 412 756 823 1116 4.58e-53 200
Msa0347710 AT1G48490.4 34.971 346 172 6 412 756 824 1117 4.67e-53 200
Msa0347710 AT1G30640.3 31.565 377 213 11 402 771 12 350 1.11e-47 176
Msa0347710 AT1G30640.2 32.075 371 207 11 408 771 111 443 1.21e-47 178
Msa0347710 AT1G30640.1 32.075 371 207 11 408 771 111 443 1.21e-47 178
Msa0347710 AT5G09890.2 32.584 356 200 8 405 756 90 409 2.93e-47 176
Msa0347710 AT5G09890.1 32.584 356 200 8 405 756 90 409 3.26e-47 176
Msa0347710 AT4G14350.2 30.749 374 212 10 405 772 107 439 6.56e-43 164
Msa0347710 AT4G14350.1 30.749 374 212 10 405 772 107 439 6.56e-43 164
Msa0347710 AT4G14350.4 30.749 374 212 10 405 772 107 439 6.56e-43 164
Msa0347710 AT4G14350.3 30.749 374 212 10 405 772 107 439 6.77e-43 164
Msa0347710 AT1G03920.2 31.183 372 212 8 405 772 12 343 7.81e-43 162
Msa0347710 AT1G03920.1 31.117 376 207 9 405 772 125 456 9.51e-43 164
Msa0347710 AT1G03920.3 31.117 376 207 9 405 772 125 456 9.51e-43 164
Msa0347710 AT4G33080.1 29.609 358 214 9 405 756 82 407 1.60e-42 162
Msa0347710 AT4G33080.2 29.609 358 214 9 405 756 82 407 1.89e-42 162
Msa0347710 AT2G20470.3 30.352 369 212 8 408 772 115 442 2.81e-42 162
Msa0347710 AT2G20470.2 29.839 372 216 7 405 772 112 442 3.69e-42 162
Msa0347710 AT2G20470.1 29.839 372 216 7 405 772 112 442 3.69e-42 162
Msa0347710 AT3G23310.1 30.481 374 215 12 405 772 108 442 5.80e-41 159
Msa0347710 AT2G19400.1 31.594 345 201 9 417 756 105 419 1.98e-39 154
Msa0347710 AT5G58140.4 44.275 131 73 0 391 521 551 681 1.66e-31 132
Msa0347710 AT5G04510.3 36.979 192 108 3 381 572 14 192 4.71e-28 115
Msa0347710 AT5G04510.2 39.506 162 91 2 411 572 38 192 6.42e-28 117
Msa0347710 AT5G04510.2 35.821 134 80 3 638 767 196 327 3.08e-17 85.5
Msa0347710 AT3G08730.1 46.094 128 63 4 645 771 285 407 1.06e-27 117
Msa0347710 AT3G08730.1 39.103 156 91 3 410 564 127 279 1.82e-26 114
Msa0347710 AT3G08730.2 46.094 128 63 4 645 771 285 407 1.06e-27 117
Msa0347710 AT3G08730.2 39.103 156 91 3 410 564 127 279 1.82e-26 114
Msa0347710 AT5G04510.1 36.979 192 108 3 381 572 14 192 1.21e-27 118
Msa0347710 AT5G04510.1 35.821 134 80 3 638 767 196 327 2.90e-17 86.3
Msa0347710 AT3G10540.1 38.372 172 96 3 401 572 32 193 3.83e-27 116
Msa0347710 AT3G10540.1 36.567 134 79 3 638 767 197 328 8.70e-18 87.8
Msa0347710 AT3G17850.1 42.568 148 83 1 417 564 882 1027 4.73e-27 119
Msa0347710 AT3G17850.1 44.144 111 60 2 647 756 1067 1176 6.91e-23 105
Msa0347710 AT3G08720.1 39.103 156 91 3 410 564 133 285 7.37e-27 115
Msa0347710 AT3G08720.1 48.673 113 54 3 645 756 291 400 8.79e-26 112
Msa0347710 AT3G08720.3 39.103 156 91 3 410 564 133 285 7.37e-27 115
Msa0347710 AT3G08720.3 48.673 113 54 3 645 756 291 400 8.79e-26 112
Msa0347710 AT3G08720.4 39.103 156 91 3 410 564 133 285 7.37e-27 115
Msa0347710 AT3G08720.4 48.673 113 54 3 645 756 291 400 8.79e-26 112
Msa0347710 AT3G08720.2 39.103 156 91 3 410 564 133 285 7.37e-27 115
Msa0347710 AT3G08720.2 48.673 113 54 3 645 756 291 400 8.79e-26 112
Msa0347710 AT2G45490.1 45.045 111 56 3 641 751 168 273 1.64e-20 93.2
Msa0347710 AT2G45490.1 35.256 156 97 2 414 568 19 171 1.73e-19 90.1
Msa0347710 AT2G20050.1 40.870 115 64 2 647 759 934 1046 7.33e-20 95.9
Msa0347710 AT2G20050.2 40.870 115 64 2 647 759 931 1043 7.51e-20 95.9
Msa0347710 AT5G18700.1 37.748 151 86 3 414 564 1 143 8.46e-20 95.9
Msa0347710 AT2G45490.2 35.256 156 97 2 414 568 19 171 2.17e-19 89.0
Msa0347710 AT2G45490.2 43.182 88 49 1 641 728 168 254 5.31e-15 76.3
Msa0347710 AT5G45810.1 26.132 287 136 5 406 691 17 228 4.64e-19 91.7
Msa0347710 AT5G45820.1 32.484 157 103 1 408 564 3 156 9.13e-19 90.5
Msa0347710 AT4G18700.1 25.979 281 132 5 412 691 21 226 1.61e-18 90.1
Msa0347710 AT4G32830.1 26.562 320 156 8 417 736 31 271 3.21e-18 86.7
Msa0347710 AT2G25880.3 31.841 201 115 3 365 565 54 232 5.62e-18 86.7
Msa0347710 AT2G25880.3 39.252 107 61 1 644 750 234 336 1.13e-16 82.8
Msa0347710 AT2G25880.1 36.242 149 93 1 417 565 25 171 6.40e-18 85.5
Msa0347710 AT2G25880.1 38.889 108 62 1 644 751 173 276 4.07e-17 83.2
Msa0347710 AT2G25880.4 36.242 149 93 1 417 565 38 184 8.13e-18 85.5
Msa0347710 AT2G25880.4 39.252 107 61 1 644 750 186 288 3.64e-17 83.6
Msa0347710 AT1G12680.1 35.714 154 89 3 421 573 111 255 1.59e-17 86.7
Msa0347710 AT5G25110.1 30.818 159 107 1 406 564 32 187 1.75e-17 86.7
Msa0347710 AT2G25880.2 39.252 107 61 1 644 750 141 243 2.72e-17 83.2
Msa0347710 AT5G01810.1 31.013 158 106 1 407 564 2 156 3.45e-17 85.5
Msa0347710 AT5G01810.2 31.013 158 106 1 407 564 2 156 3.45e-17 85.5
Msa0347710 AT5G10930.1 34.000 150 93 4 417 564 12 157 3.66e-17 85.5
Msa0347710 AT1G29230.1 32.468 154 101 1 411 564 68 218 5.47e-17 85.5
Msa0347710 AT5G01810.3 31.013 158 106 1 407 564 2 156 6.00e-17 84.0
Msa0347710 AT2G25090.1 34.000 150 94 3 417 564 15 161 1.64e-16 83.6
Msa0347710 AT4G14580.1 32.051 156 103 2 410 564 14 167 1.72e-16 83.2
Msa0347710 AT1G54960.1 32.680 153 96 3 417 564 68 218 2.18e-16 84.0
Msa0347710 AT1G54960.2 32.680 153 96 3 417 564 68 218 2.18e-16 84.0
Msa0347710 AT3G17510.1 31.169 154 104 1 411 564 14 165 4.37e-16 82.0
Msa0347710 AT2G34180.1 30.120 166 113 1 400 565 40 202 4.40e-16 82.4
Msa0347710 AT4G24400.1 30.667 150 98 2 417 564 9 154 5.35e-16 82.0
Msa0347710 AT5G57630.2 29.936 157 103 2 410 564 5 156 6.55e-16 81.3
Msa0347710 AT5G57630.1 29.936 157 103 2 410 564 5 156 6.66e-16 81.3
Msa0347710 AT4G24400.2 30.667 150 98 2 417 564 9 154 7.75e-16 81.3
Msa0347710 AT2G30360.1 24.405 336 174 9 417 751 21 277 1.17e-15 80.9
Msa0347710 AT1G09000.1 32.680 153 96 3 417 564 69 219 1.30e-15 81.6
Msa0347710 AT1G09000.2 32.680 153 96 3 417 564 69 219 1.41e-15 81.3
Msa0347710 AT3G29160.3 32.026 153 98 2 414 564 17 165 1.82e-15 79.3
Msa0347710 AT3G23000.1 33.750 160 87 4 414 564 22 171 2.44e-15 79.7
Msa0347710 AT3G06030.1 34.014 147 90 3 423 564 74 218 2.77e-15 80.5
Msa0347710 AT3G29160.1 32.026 153 98 2 414 564 17 165 3.38e-15 79.7
Msa0347710 AT3G29160.2 32.026 153 98 2 414 564 17 165 3.38e-15 79.7
Msa0347710 AT3G01090.3 32.680 153 97 2 414 564 16 164 4.13e-15 79.3
Msa0347710 AT3G01090.1 32.680 153 97 2 414 564 16 164 4.13e-15 79.3
Msa0347710 AT3G01090.2 32.680 153 97 2 414 564 39 187 4.59e-15 79.3
Msa0347710 AT1G30270.1 29.054 148 103 1 417 564 31 176 1.11e-14 77.8
Msa0347710 AT5G21326.1 23.313 326 163 7 417 736 13 257 1.21e-14 77.4
Msa0347710 AT2G26980.1 29.730 148 102 1 417 564 14 159 1.22e-14 77.0
Msa0347710 AT2G26980.3 29.730 148 102 1 417 564 14 159 1.35e-14 77.4
Msa0347710 AT1G30270.2 29.054 148 103 1 417 564 31 176 1.53e-14 77.4
Msa0347710 AT2G26980.4 29.730 148 102 1 417 564 24 169 1.61e-14 77.4
Msa0347710 AT4G24100.2 24.042 287 144 8 406 691 22 235 2.36e-14 77.4
Msa0347710 AT4G24100.1 24.042 287 144 8 406 691 22 235 2.52e-14 77.4
Msa0347710 AT4G30960.1 33.108 148 96 1 417 564 24 168 2.89e-14 76.3
Msa0347710 AT4G24100.4 24.042 287 144 8 406 691 38 251 3.02e-14 77.4
Msa0347710 AT2G26980.5 29.730 148 102 1 417 564 14 159 3.07e-14 76.3
Msa0347710 AT4G24100.3 24.042 287 144 8 406 691 38 251 3.22e-14 77.0
Msa0347710 AT1G35670.1 30.622 209 126 6 416 617 25 221 3.28e-14 76.6
Msa0347710 AT2G26980.2 29.730 148 102 1 417 564 14 159 3.31e-14 74.3
Msa0347710 AT4G04720.2 32.484 157 96 4 415 565 78 230 3.38e-14 76.6
Msa0347710 AT4G04720.2 32.381 105 64 3 651 753 241 340 4.84e-11 66.6
Msa0347710 AT4G04720.1 32.484 157 96 4 415 565 78 230 3.38e-14 76.6
Msa0347710 AT4G04720.1 32.381 105 64 3 651 753 241 340 4.84e-11 66.6
Msa0347710 AT5G39440.1 31.373 153 99 2 414 564 16 164 3.66e-14 76.3
Msa0347710 AT1G69220.1 27.317 205 133 3 377 568 196 397 6.67e-14 76.3
Msa0347710 AT2G41860.1 33.987 153 95 3 417 565 54 204 1.06e-13 75.1
Msa0347710 AT2G41860.2 33.987 153 95 3 417 565 54 204 1.11e-13 75.1
Msa0347710 AT5G58380.1 29.861 144 98 1 421 564 16 156 1.15e-13 74.7
Msa0347710 AT4G09570.1 30.144 209 127 6 416 617 24 220 1.52e-13 74.3
Msa0347710 AT5G14720.1 32.258 155 99 4 412 564 11 161 1.57e-13 74.7
Msa0347710 AT5G14720.2 32.258 155 99 4 412 564 11 161 1.57e-13 74.7
Msa0347710 AT1G53570.7 33.103 145 91 4 423 564 220 361 1.67e-13 74.3
Msa0347710 AT1G53570.6 33.103 145 91 4 423 564 220 361 1.68e-13 74.3
Msa0347710 AT1G53570.1 33.103 145 91 4 423 564 220 361 1.83e-13 74.7
Msa0347710 AT1G53570.2 33.103 145 91 4 423 564 220 361 1.93e-13 74.3
Msa0347710 AT1G53570.3 33.103 145 91 4 423 564 220 361 1.93e-13 74.3
Msa0347710 AT1G63700.1 31.507 146 96 2 421 564 404 547 1.94e-13 74.7
Msa0347710 AT1G63700.2 31.507 146 96 2 421 564 404 547 1.94e-13 74.7
Msa0347710 AT1G53570.4 33.103 145 91 4 423 564 220 361 2.01e-13 74.3
Msa0347710 AT1G01140.3 28.571 168 113 2 397 564 4 164 3.29e-13 73.2
Msa0347710 AT1G01140.1 28.571 168 113 2 397 564 4 164 3.92e-13 72.8
Msa0347710 AT1G48260.1 31.081 148 100 1 417 564 11 156 3.98e-13 72.8
Msa0347710 AT1G01140.2 28.571 168 113 2 397 564 4 164 4.17e-13 72.8
Msa0347710 AT5G28290.1 28.289 152 107 2 414 564 1 151 4.42e-13 73.2
Msa0347710 AT5G28290.2 28.289 152 107 2 414 564 1 151 4.42e-13 73.2
Msa0347710 AT2G38490.1 33.333 159 96 5 417 571 28 180 4.68e-13 72.4
Msa0347710 AT5G28290.3 28.289 152 107 2 414 564 1 151 5.01e-13 73.2
Msa0347710 AT5G39420.1 32.941 170 107 5 399 564 85 251 6.52e-13 72.8
Msa0347710 AT1G70430.3 32.903 155 98 4 412 564 11 161 1.18e-12 72.0
Msa0347710 AT1G70430.4 32.903 155 98 4 412 564 11 161 1.23e-12 72.0
Msa0347710 AT3G04810.2 26.974 152 109 2 414 564 1 151 1.34e-12 71.6
Msa0347710 AT3G04810.1 26.974 152 109 2 414 564 1 151 1.34e-12 71.6
Msa0347710 AT3G04810.3 26.974 152 109 2 414 564 1 151 1.34e-12 71.6
Msa0347710 AT1G70430.1 32.903 155 98 4 412 564 11 161 1.39e-12 71.6
Msa0347710 AT5G35410.2 27.586 145 101 2 421 564 15 156 3.91e-12 69.3
Msa0347710 AT1G69220.2 30.625 160 105 3 409 568 217 370 4.36e-12 70.5
Msa0347710 AT1G32320.1 32.867 143 86 3 423 564 54 187 5.05e-12 68.2
Msa0347710 AT3G61960.2 31.298 131 83 3 422 550 15 140 5.94e-12 69.7
Msa0347710 AT3G61960.1 30.882 136 87 3 417 550 10 140 6.10e-12 69.7
Msa0347710 AT2G17290.1 32.335 167 106 5 409 571 76 239 6.64e-12 69.3
Msa0347710 AT2G17290.2 32.335 167 106 5 409 571 76 239 6.64e-12 69.3
Msa0347710 AT4G14480.1 30.519 154 104 2 412 564 10 161 7.30e-12 68.9
Msa0347710 AT3G10660.2 30.851 188 112 8 389 565 156 336 7.30e-12 69.3
Msa0347710 AT3G10660.1 30.851 188 112 8 389 565 156 336 7.30e-12 69.3
Msa0347710 AT5G35410.1 27.586 145 101 2 421 564 15 156 9.27e-12 68.6
Msa0347710 AT1G50700.3 31.461 178 109 6 394 565 53 223 9.38e-12 68.6
Msa0347710 AT4G35310.2 30.952 168 107 5 409 571 88 251 1.07e-11 68.9
Msa0347710 AT4G35310.1 30.952 168 107 5 409 571 88 251 1.07e-11 68.9
Msa0347710 AT1G53050.2 31.788 151 96 5 417 564 134 280 1.15e-11 68.9
Msa0347710 AT1G53050.1 31.788 151 96 5 417 564 134 280 1.15e-11 68.9
Msa0347710 AT1G50700.1 31.461 178 109 6 394 565 53 223 1.27e-11 68.6
Msa0347710 AT3G07980.1 26.974 152 110 1 417 568 20 170 1.58e-11 68.9
Msa0347710 AT3G15220.1 31.169 154 100 4 416 568 14 162 1.66e-11 68.6
Msa0347710 AT1G50700.2 31.461 178 109 6 394 565 53 223 1.84e-11 68.2
Msa0347710 AT3G07980.2 26.974 152 110 1 417 568 20 170 1.85e-11 68.6
Msa0347710 AT1G61950.1 33.548 155 94 5 417 565 98 249 2.20e-11 67.8
Msa0347710 AT5G01820.1 31.690 142 94 1 423 564 28 166 3.32e-11 66.6
Msa0347710 AT4G10010.2 32.895 152 93 6 417 564 156 302 3.60e-11 67.4
Msa0347710 AT1G54510.4 26.623 154 107 3 414 564 1 151 4.06e-11 67.0
Msa0347710 AT1G54510.2 26.623 154 107 3 414 564 1 151 4.06e-11 67.0
Msa0347710 AT1G54510.1 26.623 154 107 3 414 564 1 151 4.06e-11 67.0
Msa0347710 AT1G54510.3 26.623 154 107 3 414 564 1 151 4.06e-11 67.0
Msa0347710 AT1G08650.1 33.333 108 64 3 648 752 172 274 4.38e-11 65.1
Msa0347710 AT4G21940.3 33.333 105 63 3 651 753 263 362 4.41e-11 66.6
Msa0347710 AT4G21940.2 33.333 105 63 3 651 753 263 362 4.64e-11 66.6
Msa0347710 AT4G21940.1 33.333 105 63 3 651 753 263 362 4.87e-11 66.6
Msa0347710 AT2G17890.1 29.469 207 117 8 423 616 114 304 6.11e-11 66.2
Msa0347710 AT5G23580.1 33.121 157 99 3 416 568 21 175 6.84e-11 65.9
Msa0347710 AT1G73500.1 31.034 145 89 4 423 564 53 189 9.60e-11 64.3

Find 198 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCCCAAGTTTCGCGATTT+TGG 0.148878 3_1:-8927413 Msa0347710:CDS
GCCTAAAGTGCCTCAAATTT+AGG 0.247655 3_1:+8929753 None:intergenic
GTTTGTCCGTCTCAGGCTTC+TGG 0.251704 3_1:-8930757 Msa0347710:CDS
CCTTCTTTGAAGGCCTCAAC+TGG 0.257721 3_1:-8927466 Msa0347710:CDS
GTTTATCTTGCAGAACTAAT+TGG 0.264923 3_1:-8929695 Msa0347710:CDS
CCAGAGATATCTACACTTTC+CGG 0.270119 3_1:-8930571 Msa0347710:CDS
CCGTCTCAGGCTTCTGGAAT+TGG 0.274806 3_1:-8930751 Msa0347710:CDS
AGAGCTTAGTCGTAGTAATA+TGG 0.275471 3_1:+8929540 None:intergenic
CATGAACTTCCTTAAGAAAA+AGG 0.286513 3_1:-8930200 Msa0347710:CDS
TAGAAGTTGCAAATGGATTA+AGG 0.303372 3_1:-8927154 Msa0347710:three_prime_UTR
TGGAACTAGTGCTCCATCTA+TGG 0.306658 3_1:-8927393 Msa0347710:CDS
TAAGCTCTCTTGCTTGGTTA+TGG 0.306787 3_1:-8929525 Msa0347710:CDS
CCATAACTTTCAGTGCAAAA+AGG 0.316784 3_1:+8929663 None:intergenic
GTTCCTACAAATCAGGAAAA+AGG 0.319893 3_1:-8930894 Msa0347710:CDS
AATCGATTAGGTTCGATAAA+AGG 0.321850 3_1:-8927512 Msa0347710:CDS
TGCATTCATATTTGATGATT+CGG 0.323747 3_1:+8930999 None:intergenic
TCCTTCTGTGCAGCCATAGA+TGG 0.323977 3_1:+8927380 None:intergenic
CGCAACAGAGTTCTCTTAAA+AGG 0.324295 3_1:-8930789 Msa0347710:CDS
ACCTAAATTTGAGGCACTTT+AGG 0.328785 3_1:-8929754 Msa0347710:CDS
AAGTTCATGTTATTGAATAT+TGG 0.333214 3_1:+8930214 None:intergenic
TGCTACATCGGGAAATTTAC+CGG 0.345376 3_1:+8930552 None:intergenic
GGAGAATGCAAATGATTTAG+AGG 0.354434 3_1:-8927360 Msa0347710:CDS
AAAGAGGAACAATTTGATCT+TGG 0.357600 3_1:+8930449 None:intergenic
TTAACTCAATTAATGTTAGT+AGG 0.372455 3_1:-8930039 Msa0347710:CDS
TTCTTTGCGGCATCTGCATC+GGG 0.378589 3_1:+8927977 None:intergenic
GATAATGTATCATCATTTGA+TGG 0.378789 3_1:+8927632 None:intergenic
TCGGAGAGCCTTAAGTTTCC+AGG 0.381408 3_1:-8927599 Msa0347710:CDS
GCTCCTATTCTATTGTCTCC+CGG 0.388519 3_1:-8927878 Msa0347710:CDS
TTCATGCAAGAGATTTGATC+AGG 0.391727 3_1:-8927559 Msa0347710:CDS
GATCAGGGGATTGTTGATAA+AGG 0.391927 3_1:-8927543 Msa0347710:CDS
TGCTTGCCAGCTTCAACCTC+AGG 0.397955 3_1:+8930424 None:intergenic
CAGTTCTTCAATGCCGGATA+AGG 0.400698 3_1:-8930335 Msa0347710:CDS
AAACAGCATCCCTTCTTTGA+AGG 0.402283 3_1:-8927476 Msa0347710:CDS
CATGTGAGATAGTGGAATAC+AGG 0.405170 3_1:-8930966 Msa0347710:CDS
AAAATCAAGATCAAAGGAAA+AGG 0.405263 3_1:-8929945 Msa0347710:CDS
AGTTCCAAAATCGCGAAACT+TGG 0.408752 3_1:+8927409 None:intergenic
GAATATAGTGTAGGAAGAAA+TGG 0.410692 3_1:+8929563 None:intergenic
ATGGAAAATAATAAGCTTAG+AGG 0.411097 3_1:+8931740 None:intergenic
CTCAAGCCTTAGCACATGTT+TGG 0.411685 3_1:-8930242 Msa0347710:CDS
ATCATTTGATGGACCTTTGA+AGG 0.413604 3_1:+8927643 None:intergenic
ATCCGGAGGATGCTCCTTTG+TGG 0.413676 3_1:-8931102 Msa0347710:five_prime_UTR
GATTAAAGTTTGTCCGTCTC+AGG 0.419899 3_1:-8930764 Msa0347710:CDS
TTTCTTTGCGGCATCTGCAT+CGG 0.420081 3_1:+8927976 None:intergenic
CTCCTATTCTATTGTCTCCC+GGG 0.422640 3_1:-8927877 Msa0347710:CDS
AGTGCCTGCTTTAAACTAAC+AGG 0.422731 3_1:+8930718 None:intergenic
TGAGGCACTTTAGGCTGATA+AGG 0.425604 3_1:-8929745 Msa0347710:CDS
AGTAGTTGTTCCTACAAATC+AGG 0.427686 3_1:-8930901 Msa0347710:CDS
AAAACCTCCAATCCTTGCTC+AGG 0.437304 3_1:-8927956 Msa0347710:CDS
TGAGACGGACAAACTTTAAT+CGG 0.438910 3_1:+8930766 None:intergenic
CATCTCTCAGGCATCAGAAA+TGG 0.441355 3_1:-8930683 Msa0347710:CDS
AAGAGGAACAATTTGATCTT+GGG 0.443105 3_1:+8930450 None:intergenic
AGGAAATACGATGATGTCTT+GGG 0.444414 3_1:-8927134 Msa0347710:three_prime_UTR
AAGGATCCTGAAAATCGATT+AGG 0.446350 3_1:-8927524 Msa0347710:CDS
GAAGATGGTTTGACTAACAT+TGG 0.447639 3_1:+8928001 None:intergenic
GCTGTAGATTGGTGGACTTT+CGG 0.448197 3_1:-8927701 Msa0347710:CDS
CTTGCATGAAAACTGACTAT+AGG 0.448357 3_1:+8927572 None:intergenic
AAGGAAATACGATGATGTCT+TGG 0.449768 3_1:-8927135 Msa0347710:three_prime_UTR
CCTTGAGTATTTGCACATGA+TGG 0.456761 3_1:-8928125 Msa0347710:CDS
CTTTCACCTGAGGTTGAAGC+TGG 0.459307 3_1:-8930430 Msa0347710:CDS
TTGGTTATGGAGTATTGTCC+AGG 0.460122 3_1:-8929512 Msa0347710:CDS
AGTTTAAAGCAGGCACTTAG+AGG 0.460496 3_1:-8930712 Msa0347710:CDS
AATTAGTTCTGCAAGATAAA+CGG 0.460739 3_1:+8929697 None:intergenic
TACGACTAAGCTCTCTTGCT+TGG 0.462506 3_1:-8929531 Msa0347710:CDS
GTTCCAAAATCGCGAAACTT+GGG 0.464333 3_1:+8927410 None:intergenic
AAGCACGAAACTTGCCAATC+CGG 0.464839 3_1:+8927902 None:intergenic
TAGCAATACATGTGAGATAG+TGG 0.465504 3_1:-8930974 Msa0347710:CDS
TAACTCAATTAATGTTAGTA+GGG 0.466488 3_1:-8930038 Msa0347710:CDS
AGTAGTTTCAACAAGGAGAA+TGG 0.472113 3_1:-8930139 Msa0347710:CDS
CCTAGTTCTAGCAATGATAG+TGG 0.472374 3_1:-8930277 Msa0347710:CDS
TAGAGGATTGTGCATCTCTC+AGG 0.474171 3_1:-8930695 Msa0347710:CDS
TATGTCCATCTTCGCGTACT+AGG 0.475120 3_1:+8928068 None:intergenic
ACACCCTTTCTGTCTCCAAC+CGG 0.476097 3_1:-8927921 Msa0347710:CDS
TCACTCAATTCTGCTCAATC+CGG 0.476655 3_1:-8931119 Msa0347710:five_prime_UTR
ACTTAACTAGAAGTTGCAAA+TGG 0.478762 3_1:-8927161 Msa0347710:three_prime_UTR
GCACGGTCTAACTCCTTCGT+TGG 0.485875 3_1:-8927776 Msa0347710:CDS
GGCAAAATCTCGAAAGATGA+AGG 0.485968 3_1:-8927855 Msa0347710:CDS
TAGGAGTACCTGGAAACTTA+AGG 0.486452 3_1:+8927591 None:intergenic
CTTTCTGTCTCCAACCGGAT+TGG 0.486624 3_1:-8927916 Msa0347710:CDS
CCAGTTGAGGCCTTCAAAGA+AGG 0.487068 3_1:+8927466 None:intergenic
ATGGATGATCCAACATTTGA+AGG 0.487176 3_1:+8929582 None:intergenic
TCGCGAAACTTGGGGAGCTC+CGG 0.490812 3_1:+8927419 None:intergenic
AGCCCCTGAGCAAGGATTGG+AGG 0.492521 3_1:+8927952 None:intergenic
GACATGGAAACGCTGTAGAT+TGG 0.493784 3_1:-8927712 Msa0347710:CDS
AATATCCTAGTACGCGAAGA+TGG 0.496440 3_1:-8928073 Msa0347710:CDS
TTGTCTCAGTTCTTCAATGC+CGG 0.496819 3_1:-8930341 Msa0347710:CDS
GCCTCAACTGGGCTCTAATA+CGG 0.497805 3_1:-8927454 Msa0347710:CDS
AATAATAAGCTTAGAGGTGA+AGG 0.498273 3_1:+8931746 None:intergenic
TCCATCTATGGCTGCACAGA+AGG 0.498516 3_1:-8927381 Msa0347710:CDS
AGTGTTACAAGGATGAAAAC+AGG 0.498859 3_1:+8927251 None:intergenic
CCGGAAAGTGTAGATATCTC+TGG 0.499119 3_1:+8930571 None:intergenic
CTGATAAGGAAGCTTGGTAG+TGG 0.502190 3_1:-8929731 Msa0347710:CDS
GACAGAGATGATAGTGAATG+AGG 0.502866 3_1:+8931825 None:intergenic
GCCCCGGGAGACAATAGAAT+AGG 0.508020 3_1:+8927875 None:intergenic
GTGTAGATATCTCTGGCACT+AGG 0.508864 3_1:+8930578 None:intergenic
GAGCTTAGTCGTAGTAATAT+GGG 0.509342 3_1:+8929541 None:intergenic
ACTAGCCCCTGAGCAAGGAT+TGG 0.510788 3_1:+8927949 None:intergenic
GAACTTGATATTGCTACATC+GGG 0.511613 3_1:+8930541 None:intergenic
GGAGCCTGTTAGTTTAAAGC+AGG 0.512003 3_1:-8930722 Msa0347710:CDS
AAGCTTGTTGCATTGACCAC+AGG 0.515232 3_1:+8930499 None:intergenic
CTTCAATGCCGGATAAGGAC+CGG 0.517529 3_1:-8930330 Msa0347710:CDS
ATCCACAAAGGAGCATCCTC+CGG 0.519550 3_1:+8931100 None:intergenic
AAGAGAGATCCTTCAAATGT+TGG 0.520430 3_1:-8929591 Msa0347710:CDS
CAAGATTTACTCGACGTAGC+AGG 0.521864 3_1:+8930361 None:intergenic
TGATTTGAACTGCACGGAGA+TGG 0.522640 3_1:+8930073 None:intergenic
AATACGGTGTGCGGCACCAC+CGG 0.523412 3_1:-8927438 Msa0347710:CDS
CTTCTTTGAAGGCCTCAACT+GGG 0.523669 3_1:-8927465 Msa0347710:CDS
AGTTAAACTTATGTTGGGAA+GGG 0.523851 3_1:-8927304 Msa0347710:three_prime_UTR
TGAACTTGATATTGCTACAT+CGG 0.526210 3_1:+8930540 None:intergenic
TATGGAAAGACTCCCTTCAA+AGG 0.526777 3_1:-8927656 Msa0347710:CDS
AAATCAAGATCAAAGGAAAA+GGG 0.528192 3_1:-8929944 Msa0347710:CDS
CTGAAATTCAAACTAAAACC+AGG 0.528779 3_1:+8930004 None:intergenic
CGAAACTTGGGGAGCTCCGG+TGG 0.530434 3_1:+8927422 None:intergenic
GCATCTGCATCGGGTGAAGA+TGG 0.530836 3_1:+8927986 None:intergenic
ACATGTCAAAACACTCGAGA+TGG 0.531457 3_1:-8929811 Msa0347710:CDS
GAATTAACTTGAAACTGACT+TGG 0.531524 3_1:-8927282 Msa0347710:three_prime_UTR
ATATTGAAGAGGGTATTCCT+AGG 0.531676 3_1:+8931774 None:intergenic
AACATATGAATATCTTGCTC+CGG 0.532760 3_1:-8927753 Msa0347710:CDS
CTAGAATTCATAGTACTTCG+CGG 0.533355 3_1:-8930813 Msa0347710:CDS
GGTTGGCACGGTAAAGAAGT+TGG 0.534422 3_1:-8930611 Msa0347710:CDS
TAGTTAAACTTATGTTGGGA+AGG 0.535873 3_1:-8927305 Msa0347710:three_prime_UTR
CCACTATCATTGCTAGAACT+AGG 0.538741 3_1:+8930277 None:intergenic
AGTAGGGATTCAAGTAAACC+TGG 0.539458 3_1:-8930022 Msa0347710:CDS
TCAACTACAAGCTGTGGAAG+TGG 0.540222 3_1:+8927809 None:intergenic
GAGTTAGACCGTGCATTGGT+AGG 0.541228 3_1:+8927785 None:intergenic
TCTGACCTCTAGCACTTCCT+CGG 0.541286 3_1:+8930390 None:intergenic
AGTGAAGAGAGCAATCTTAG+TGG 0.541738 3_1:-8929860 Msa0347710:CDS
TTTAGGCTGATAAGGAAGCT+TGG 0.543262 3_1:-8929737 Msa0347710:CDS
TCATTTGATGGACCTTTGAA+GGG 0.546753 3_1:+8927644 None:intergenic
CTTGAGTATTTGCACATGAT+GGG 0.550096 3_1:-8928124 Msa0347710:CDS
CAATCCGGTTGGAGACAGAA+AGG 0.550974 3_1:+8927917 None:intergenic
GCTTCAACCTCAGGTGAAAG+AGG 0.551282 3_1:+8930433 None:intergenic
AATTGTTCCTCTTTCACCTG+AGG 0.552900 3_1:-8930440 Msa0347710:CDS
CAGTTGAGGCCTTCAAAGAA+GGG 0.554044 3_1:+8927467 None:intergenic
TACATTATCAAATGTTGTGT+CGG 0.554976 3_1:-8927618 Msa0347710:CDS
GAAGGTTGAAATATTGAAGA+GGG 0.555189 3_1:+8931764 None:intergenic
AAACCTCCAATCCTTGCTCA+GGG 0.562220 3_1:-8927955 Msa0347710:CDS
ATGGAAACGCTGTAGATTGG+TGG 0.562974 3_1:-8927709 Msa0347710:CDS
CATGCAAGAGATTTGATCAG+GGG 0.564160 3_1:-8927557 Msa0347710:CDS
GTAATATGGGAATATAGTGT+AGG 0.564957 3_1:+8929554 None:intergenic
CCATCATGTGCAAATACTCA+AGG 0.565740 3_1:+8928125 None:intergenic
TCTAGCAATGATAGTGGAGT+GGG 0.567828 3_1:-8930271 Msa0347710:CDS
TTCAATGCCGGATAAGGACC+GGG 0.572791 3_1:-8930329 Msa0347710:CDS
ACAAAATCCAAAGGAATGTG+AGG 0.576460 3_1:+8931682 None:intergenic
AGCATGGTAACCTAAATTTG+AGG 0.577285 3_1:-8929763 Msa0347710:CDS
AAACTGACTATAGGAGTACC+TGG 0.581665 3_1:+8927581 None:intergenic
TCATCAAGAGTATCAGAGGT+TGG 0.582375 3_1:-8930628 Msa0347710:CDS
AAGCTTGGTAGTGGAGACAT+TGG 0.583300 3_1:-8929722 Msa0347710:CDS
TGTAGATATCTCTGGCACTA+GGG 0.585695 3_1:+8930579 None:intergenic
AGCACATGCAGATCACCGCC+TGG 0.586843 3_1:+8929494 None:intergenic
TATTGAAGAGGGTATTCCTA+GGG 0.590043 3_1:+8931775 None:intergenic
CTCAATTCTGCTCAATCCGG+AGG 0.590845 3_1:-8931116 Msa0347710:five_prime_UTR
AATCCGGTTGGAGACAGAAA+GGG 0.591341 3_1:+8927918 None:intergenic
GCTTAACAGAAATGACAACT+AGG 0.592360 3_1:-8930480 Msa0347710:CDS
CGCTACTAGTAGTTTCAACA+AGG 0.593597 3_1:-8930146 Msa0347710:CDS
TGCTAATCATTCTATTCCTG+TGG 0.594286 3_1:-8930515 Msa0347710:CDS
TCATGCAAGAGATTTGATCA+GGG 0.596246 3_1:-8927558 Msa0347710:CDS
ATGCTATGATTTGAACTGCA+CGG 0.599211 3_1:+8930067 None:intergenic
ACGAAACTTGCCAATCCGGT+TGG 0.599224 3_1:+8927906 None:intergenic
ATGCAACTAGCCCCTGAGCA+AGG 0.600007 3_1:+8927944 None:intergenic
TGAAGGTTGAAATATTGAAG+AGG 0.601156 3_1:+8931763 None:intergenic
CAGCTCATCAAGAGTATCAG+AGG 0.602114 3_1:-8930632 Msa0347710:CDS
TTCCAAAATCGCGAAACTTG+GGG 0.602237 3_1:+8927411 None:intergenic
TTCTAGCAATGATAGTGGAG+TGG 0.602696 3_1:-8930272 Msa0347710:CDS
TCCTATTCTATTGTCTCCCG+GGG 0.604566 3_1:-8927876 Msa0347710:CDS
AAGCTATACTAAGTGTTACA+AGG 0.604959 3_1:+8927240 None:intergenic
TGCGACAGAAGCAAACATAC+AGG 0.607992 3_1:-8929472 Msa0347710:CDS
GTAGGCTCAACTACAAGCTG+TGG 0.608343 3_1:+8927803 None:intergenic
CATGTCAAAACACTCGAGAT+GGG 0.608358 3_1:-8929810 Msa0347710:CDS
AACTTCAAACTTCTAACCCT+AGG 0.611813 3_1:-8931791 Msa0347710:five_prime_UTR
GCTGACATAGCTGCTCAAGT+TGG 0.612275 3_1:-8927833 Msa0347710:CDS
CCGGAGATCATCAAAAGTGA+GGG 0.616865 3_1:-8927734 Msa0347710:CDS
GAAGGAGTTAGACCGTGCAT+TGG 0.619839 3_1:+8927781 None:intergenic
CAAAATCCAAAGGAATGTGA+GGG 0.622924 3_1:+8931683 None:intergenic
TGTATATCGAGATCTAAAGC+CGG 0.625042 3_1:-8928098 Msa0347710:CDS
ATCATCAAAAGTGAGGGACA+TGG 0.626030 3_1:-8927728 Msa0347710:CDS
CAAGCAAACGCTACGAACCG+AGG 0.626592 3_1:-8930407 Msa0347710:CDS
ATGTGAGATAGTGGAATACA+GGG 0.628803 3_1:-8930965 Msa0347710:CDS
TCCGGAGATCATCAAAAGTG+AGG 0.628843 3_1:-8927735 Msa0347710:CDS
CCAATTCCAGAAGCCTGAGA+CGG 0.637306 3_1:+8930751 None:intergenic
ACGAACCGAGGAAGTGCTAG+AGG 0.641215 3_1:-8930395 Msa0347710:CDS
TTACCTGAAACAAAATCCAA+AGG 0.643656 3_1:+8931673 None:intergenic
GGCTTCTGGAATTGGCATCG+CGG 0.647396 3_1:-8930743 Msa0347710:CDS
CATCATGTGCAAATACTCAA+GGG 0.648325 3_1:+8928126 None:intergenic
CGTGCGATTCAACAGCAGCA+TGG 0.649464 3_1:-8929779 Msa0347710:CDS
GACTCACATAGAGAATTGCA+AGG 0.651681 3_1:+8931069 None:intergenic
AAGAGTATCAGAGGTTGGCA+CGG 0.653143 3_1:-8930623 Msa0347710:CDS
CTTAGTGGTTCGAGTCGCAG+TGG 0.654632 3_1:-8929845 Msa0347710:CDS
CAAGTAAAATAGTGTAACTG+CGG 0.656906 3_1:+8931944 None:intergenic
TAGTTGAGCCTACCAATGCA+CGG 0.658606 3_1:-8927793 Msa0347710:CDS
ACTACTAGTAGCGCAGCTTG+AGG 0.673996 3_1:+8930156 None:intergenic
CTATCATTGCTAGAACTAGG+TGG 0.677249 3_1:+8930280 None:intergenic
ATATTCATATGTTCCAACGA+AGG 0.681950 3_1:+8927763 None:intergenic
AAGGAAATCAAAATCCACAA+AGG 0.684181 3_1:+8931088 None:intergenic
TTGTAGGAACAACTACTCTG+AGG 0.686360 3_1:+8930907 None:intergenic
CTGGGCTCTAATACGGTGTG+CGG 0.688622 3_1:-8927447 Msa0347710:CDS
AACCTCCAATCCTTGCTCAG+GGG 0.694679 3_1:-8927954 Msa0347710:CDS
ACCGTATTAGAGCCCAGTTG+AGG 0.696795 3_1:+8927453 None:intergenic
GTTATGGAGTATTGTCCAGG+CGG 0.701926 3_1:-8929509 Msa0347710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAGAAAATATGAAAA+TGG + chr3_1:8927427-8927446 None:intergenic 10.0%
!!! ATTTTCATATTTTCTATTTT+TGG - chr3_1:8927426-8927445 Msa0347710:CDS 10.0%
!!! ATTTATTTATTTTGTTTTTG+AGG - chr3_1:8927560-8927579 Msa0347710:CDS 10.0%
!! AGTTAATTAATTATTAAGCA+GGG + chr3_1:8927521-8927540 None:intergenic 15.0%
!! AAGTTAATTAATTATTAAGC+AGG + chr3_1:8927522-8927541 None:intergenic 15.0%
!! TTAATCCATCAATTATAAAA+GGG + chr3_1:8927677-8927696 None:intergenic 15.0%
!! GAAAATACAAGATATTATAT+AGG - chr3_1:8930320-8930339 Msa0347710:CDS 15.0%
!!! TTTTTTAGTTAAACTTATGT+TGG - chr3_1:8931835-8931854 Msa0347710:five_prime_UTR 15.0%
!!! TTTTTAGTTAAACTTATGTT+GGG - chr3_1:8931836-8931855 Msa0347710:five_prime_UTR 15.0%
!! AACAAAGAAAAATATAGAGT+AGG - chr3_1:8927152-8927171 Msa0347710:three_prime_UTR 20.0%
!!! GGGTTAATTCTTTTATTTTT+TGG - chr3_1:8927591-8927610 Msa0347710:CDS 20.0%
!!! TTTTAGCTTTACAATTAACT+TGG + chr3_1:8927627-8927646 None:intergenic 20.0%
!! CTTAATCCATCAATTATAAA+AGG + chr3_1:8927678-8927697 None:intergenic 20.0%
!!! TTTTTCCTATTTATTCAATC+TGG - chr3_1:8927772-8927791 Msa0347710:CDS 20.0%
!! TAAATCCAGATTGAATAAAT+AGG + chr3_1:8927780-8927799 None:intergenic 20.0%
!! ATTACTATTACTACAATTTC+AGG - chr3_1:8927961-8927980 Msa0347710:CDS 20.0%
!! AAGTTCATGTTATTGAATAT+TGG + chr3_1:8928934-8928953 None:intergenic 20.0%
!! TTAACTCAATTAATGTTAGT+AGG - chr3_1:8929106-8929125 Msa0347710:intron 20.0%
!! TAACTCAATTAATGTTAGTA+GGG - chr3_1:8929107-8929126 Msa0347710:intron 20.0%
!!! TTTTTAAACTTAATCTTGCT+TGG - chr3_1:8929775-8929794 Msa0347710:CDS 20.0%
!! ATATTGCAAAAAGTTATTCA+GGG + chr3_1:8930782-8930801 None:intergenic 20.0%
!! AATATTGCAAAAAGTTATTC+AGG + chr3_1:8930783-8930802 None:intergenic 20.0%
!!! ATTTTGGAATATTGATAATG+TGG - chr3_1:8930810-8930829 Msa0347710:CDS 20.0%
!! GATACAATATTACAATTTCA+AGG - chr3_1:8930843-8930862 Msa0347710:CDS 20.0%
!! TCGAAAAATACAACATTTAT+CGG + chr3_1:8930886-8930905 None:intergenic 20.0%
!!! ATGTTGTATTTTTCGATAAA+TGG - chr3_1:8930890-8930909 Msa0347710:CDS 20.0%
!!! TTTTTGTTTGAGCTTTTATA+TGG - chr3_1:8931471-8931490 Msa0347710:intron 20.0%
! AGGAAAGAGAAAAACATAAA+AGG + chr3_1:8927303-8927322 None:intergenic 25.0%
! ATGGAAAATAATAAGCTTAG+AGG + chr3_1:8927408-8927427 None:intergenic 25.0%
! ATTATTAAGCAGGGAAAAAA+GGG + chr3_1:8927512-8927531 None:intergenic 25.0%
! AATTATTAAGCAGGGAAAAA+AGG + chr3_1:8927513-8927532 None:intergenic 25.0%
!! TTGCTATTAATTATGATCCA+TGG - chr3_1:8927706-8927725 Msa0347710:CDS 25.0%
!!! CTTGGTTTTACATTGTTAAA+GGG - chr3_1:8927992-8928011 Msa0347710:CDS 25.0%
!! TGCATTCATATTTGATGATT+CGG + chr3_1:8928149-8928168 None:intergenic 25.0%
!! CTTTCTTTACCTTTTTCTTA+AGG + chr3_1:8928957-8928976 None:intergenic 25.0%
! AAAATCAAGATCAAAGGAAA+AGG - chr3_1:8929200-8929219 Msa0347710:intron 25.0%
! AAATCAAGATCAAAGGAAAA+GGG - chr3_1:8929201-8929220 Msa0347710:intron 25.0%
!!! AATTAGTTCTGCAAGATAAA+CGG + chr3_1:8929451-8929470 None:intergenic 25.0%
!! AGTTATGGACAATGAATTTT+TGG - chr3_1:8929497-8929516 Msa0347710:CDS 25.0%
!! TATGTGATTTATTTCTCTTG+GGG + chr3_1:8929825-8929844 None:intergenic 25.0%
!! CTATGTGATTTATTTCTCTT+GGG + chr3_1:8929826-8929845 None:intergenic 25.0%
!! TCTATGTGATTTATTTCTCT+TGG + chr3_1:8929827-8929846 None:intergenic 25.0%
!!! CAAAACTGTATTGATTAATG+TGG - chr3_1:8929853-8929872 Msa0347710:CDS 25.0%
!! GCACATAAAGACTATTATTT+TGG + chr3_1:8929879-8929898 None:intergenic 25.0%
! ATCATATTATACCTAAGAAG+TGG + chr3_1:8930432-8930451 None:intergenic 25.0%
!! TAGGTATAATATGATCCTTT+TGG - chr3_1:8930437-8930456 Msa0347710:CDS 25.0%
!! AGGTATAATATGATCCTTTT+GGG - chr3_1:8930438-8930457 Msa0347710:CDS 25.0%
! AGATTGAGTCCAATAAAATA+GGG + chr3_1:8930467-8930486 None:intergenic 25.0%
!!! ATTTTGGTATACTGATAATG+TGG + chr3_1:8930609-8930628 None:intergenic 25.0%
!! TCTAATTTTGTAGCTCATTT+TGG + chr3_1:8930625-8930644 None:intergenic 25.0%
! TACAGTCCTTACAAATATTA+AGG - chr3_1:8930751-8930770 Msa0347710:CDS 25.0%
! ACAGTCCTTACAAATATTAA+GGG - chr3_1:8930752-8930771 Msa0347710:CDS 25.0%
!! TGCAATATTAGAGATCATTT+TGG - chr3_1:8930794-8930813 Msa0347710:CDS 25.0%
! TTATCGGTAAATATCCAATT+TGG + chr3_1:8930870-8930889 None:intergenic 25.0%
! GATAATGTATCATCATTTGA+TGG + chr3_1:8931516-8931535 None:intergenic 25.0%
! TACATTATCAAATGTTGTGT+CGG - chr3_1:8931527-8931546 Msa0347710:intron 25.0%
CAAGTAAAATAGTGTAACTG+CGG + chr3_1:8927204-8927223 None:intergenic 30.0%
GAAGGTTGAAATATTGAAGA+GGG + chr3_1:8927384-8927403 None:intergenic 30.0%
TGAAGGTTGAAATATTGAAG+AGG + chr3_1:8927385-8927404 None:intergenic 30.0%
AATAATAAGCTTAGAGGTGA+AGG + chr3_1:8927402-8927421 None:intergenic 30.0%
!! ATTCCTTTGGATTTTGTTTC+AGG - chr3_1:8927469-8927488 Msa0347710:CDS 30.0%
TTACCTGAAACAAAATCCAA+AGG + chr3_1:8927475-8927494 None:intergenic 30.0%
TTATTAAGCAGGGAAAAAAG+GGG + chr3_1:8927511-8927530 None:intergenic 30.0%
! AGCTACCCTTTTATAATTGA+TGG - chr3_1:8927669-8927688 Msa0347710:CDS 30.0%
GAGAATAATTATAGTCACCA+TGG + chr3_1:8927726-8927745 None:intergenic 30.0%
!!! GCTTGGTTTTACATTGTTAA+AGG - chr3_1:8927991-8928010 Msa0347710:CDS 30.0%
AAGGAAATCAAAATCCACAA+AGG + chr3_1:8928060-8928079 None:intergenic 30.0%
! TGATATTGATCGTCTTTTCA+AGG - chr3_1:8928288-8928307 Msa0347710:intron 30.0%
TGAACTTGATATTGCTACAT+CGG + chr3_1:8928608-8928627 None:intergenic 30.0%
AAGAGGAACAATTTGATCTT+GGG + chr3_1:8928698-8928717 None:intergenic 30.0%
AAAGAGGAACAATTTGATCT+TGG + chr3_1:8928699-8928718 None:intergenic 30.0%
! CACAATGAAAATTTTTCTCC+CGG + chr3_1:8928837-8928856 None:intergenic 30.0%
CATGAACTTCCTTAAGAAAA+AGG - chr3_1:8928945-8928964 Msa0347710:intron 30.0%
CTGAAATTCAAACTAAAACC+AGG + chr3_1:8929144-8929163 None:intergenic 30.0%
TGACGAAAAATCAAGATCAA+AGG - chr3_1:8929194-8929213 Msa0347710:intron 30.0%
GTTTATCTTGCAGAACTAAT+TGG - chr3_1:8929450-8929469 Msa0347710:CDS 30.0%
GAATATAGTGTAGGAAGAAA+TGG + chr3_1:8929585-8929604 None:intergenic 30.0%
GTAATATGGGAATATAGTGT+AGG + chr3_1:8929594-8929613 None:intergenic 30.0%
AAACTTAATCTTGCTTGGAA+AGG - chr3_1:8929780-8929799 Msa0347710:CDS 30.0%
AACTTAATCTTGCTTGGAAA+GGG - chr3_1:8929781-8929800 Msa0347710:CDS 30.0%
AAAAAACTAGTCCAATAGGT+GGG + chr3_1:8930054-8930073 None:intergenic 30.0%
!!! ACCTATTGGACTAGTTTTTT+GGG - chr3_1:8930054-8930073 Msa0347710:CDS 30.0%
GAGATTGAGTCCAATAAAAT+AGG + chr3_1:8930468-8930487 None:intergenic 30.0%
GTTCTTATTCAAGTATAAGC+TGG - chr3_1:8930530-8930549 Msa0347710:CDS 30.0%
TCAATTCTATGGACCAATTA+GGG + chr3_1:8930564-8930583 None:intergenic 30.0%
TTCAATTCTATGGACCAATT+AGG + chr3_1:8930565-8930584 None:intergenic 30.0%
TAATTGGTCCATAGAATTGA+AGG - chr3_1:8930564-8930583 Msa0347710:CDS 30.0%
AATACAGTCCTTCAATTCTA+TGG + chr3_1:8930575-8930594 None:intergenic 30.0%
ATAGAATTGAAGGACTGTAT+TGG - chr3_1:8930574-8930593 Msa0347710:CDS 30.0%
TAGAATTGAAGGACTGTATT+GGG - chr3_1:8930575-8930594 Msa0347710:CDS 30.0%
TATTAACAGATCCAAACAGA+GGG + chr3_1:8930667-8930686 None:intergenic 30.0%
TCGAATGTGAATTGAAACTA+CGG + chr3_1:8930711-8930730 None:intergenic 30.0%
GTTGTCCCTTAATATTTGTA+AGG + chr3_1:8930760-8930779 None:intergenic 30.0%
!! TTGGAATATTGATAATGTGG+AGG - chr3_1:8930813-8930832 Msa0347710:CDS 30.0%
TACAATTTCAAGGACCAAAT+TGG - chr3_1:8930853-8930872 Msa0347710:CDS 30.0%
ATATTCATATGTTCCAACGA+AGG + chr3_1:8931385-8931404 None:intergenic 30.0%
AACATATGAATATCTTGCTC+CGG - chr3_1:8931392-8931411 Msa0347710:intron 30.0%
AATCGATTAGGTTCGATAAA+AGG - chr3_1:8931633-8931652 Msa0347710:intron 30.0%
TAGTTAAACTTATGTTGGGA+AGG - chr3_1:8931840-8931859 Msa0347710:five_prime_UTR 30.0%
AGTTAAACTTATGTTGGGAA+GGG - chr3_1:8931841-8931860 Msa0347710:five_prime_UTR 30.0%
! GAATTAACTTGAAACTGACT+TGG - chr3_1:8931863-8931882 Msa0347710:five_prime_UTR 30.0%
AAGCTATACTAAGTGTTACA+AGG + chr3_1:8931908-8931927 None:intergenic 30.0%
ACTTAACTAGAAGTTGCAAA+TGG - chr3_1:8931984-8932003 Msa0347710:five_prime_UTR 30.0%
!! TAGAAGTTGCAAATGGATTA+AGG - chr3_1:8931991-8932010 Msa0347710:five_prime_UTR 30.0%
AACTTCAAACTTCTAACCCT+AGG - chr3_1:8927354-8927373 Msa0347710:CDS 35.0%
!! TATTGAAGAGGGTATTCCTA+GGG + chr3_1:8927373-8927392 None:intergenic 35.0%
!! ATATTGAAGAGGGTATTCCT+AGG + chr3_1:8927374-8927393 None:intergenic 35.0%
CAAAATCCAAAGGAATGTGA+GGG + chr3_1:8927465-8927484 None:intergenic 35.0%
ACAAAATCCAAAGGAATGTG+AGG + chr3_1:8927466-8927485 None:intergenic 35.0%
!!! TTTGTTTTTGAGGTGTTTGC+TGG - chr3_1:8927570-8927589 Msa0347710:CDS 35.0%
!!! TTGTTTTTGAGGTGTTTGCT+GGG - chr3_1:8927571-8927590 Msa0347710:CDS 35.0%
AACTATCTAACCTCTTCAGT+TGG - chr3_1:8927903-8927922 Msa0347710:CDS 35.0%
!!! CAATTTCAGGTTTTGATGCT+TGG - chr3_1:8927974-8927993 Msa0347710:CDS 35.0%
TAGCAATACATGTGAGATAG+TGG - chr3_1:8928171-8928190 Msa0347710:intron 35.0%
!! ATGTGAGATAGTGGAATACA+GGG - chr3_1:8928180-8928199 Msa0347710:intron 35.0%
! TTTTCATCTGTTTCGAACTC+GGG + chr3_1:8928217-8928236 None:intergenic 35.0%
! CTTTTCATCTGTTTCGAACT+CGG + chr3_1:8928218-8928237 None:intergenic 35.0%
AGTAGTTGTTCCTACAAATC+AGG - chr3_1:8928244-8928263 Msa0347710:intron 35.0%
GTTCCTACAAATCAGGAAAA+AGG - chr3_1:8928251-8928270 Msa0347710:intron 35.0%
!! GTACCTTTTTCCTGATTTGT+AGG + chr3_1:8928257-8928276 None:intergenic 35.0%
CTAGAATTCATAGTACTTCG+CGG - chr3_1:8928332-8928351 Msa0347710:intron 35.0%
TGAGACGGACAAACTTTAAT+CGG + chr3_1:8928382-8928401 None:intergenic 35.0%
GAACTTGATATTGCTACATC+GGG + chr3_1:8928607-8928626 None:intergenic 35.0%
TGCTAATCATTCTATTCCTG+TGG - chr3_1:8928630-8928649 Msa0347710:intron 35.0%
GCTTAACAGAAATGACAACT+AGG - chr3_1:8928665-8928684 Msa0347710:intron 35.0%
AGTAGTTTCAACAAGGAGAA+TGG - chr3_1:8929006-8929025 Msa0347710:intron 35.0%
ATGCTATGATTTGAACTGCA+CGG + chr3_1:8929081-8929100 None:intergenic 35.0%
AGCATGGTAACCTAAATTTG+AGG - chr3_1:8929382-8929401 Msa0347710:intron 35.0%
! ACCTAAATTTGAGGCACTTT+AGG - chr3_1:8929391-8929410 Msa0347710:intron 35.0%
CCATAACTTTCAGTGCAAAA+AGG + chr3_1:8929485-8929504 None:intergenic 35.0%
! CCTTTTTGCACTGAAAGTTA+TGG - chr3_1:8929482-8929501 Msa0347710:CDS 35.0%
!!! ACAATGAATTTTTGGCTAGC+AGG - chr3_1:8929505-8929524 Msa0347710:CDS 35.0%
AAGAGAGATCCTTCAAATGT+TGG - chr3_1:8929554-8929573 Msa0347710:CDS 35.0%
ATGGATGATCCAACATTTGA+AGG + chr3_1:8929566-8929585 None:intergenic 35.0%
GAGCTTAGTCGTAGTAATAT+GGG + chr3_1:8929607-8929626 None:intergenic 35.0%
AGAGCTTAGTCGTAGTAATA+TGG + chr3_1:8929608-8929627 None:intergenic 35.0%
GCTGATTAGGTATACTAGAT+TGG - chr3_1:8929916-8929935 Msa0347710:CDS 35.0%
! TACACGTTGTAGAGTTTGTT+AGG - chr3_1:8929972-8929991 Msa0347710:CDS 35.0%
CACTTTGATATACTCGATGT+TGG + chr3_1:8930001-8930020 None:intergenic 35.0%
! GTATATCAAAGTGCTTGATG+TGG - chr3_1:8930008-8930027 Msa0347710:CDS 35.0%
CAAAAAACTAGTCCAATAGG+TGG + chr3_1:8930055-8930074 None:intergenic 35.0%
!!! CACCTATTGGACTAGTTTTT+TGG - chr3_1:8930053-8930072 Msa0347710:CDS 35.0%
ACCCAAAAAACTAGTCCAAT+AGG + chr3_1:8930058-8930077 None:intergenic 35.0%
!!! TTGGACTAGTTTTTTGGGTT+TGG - chr3_1:8930059-8930078 Msa0347710:CDS 35.0%
!! CAATGAAAGCACCAATTGTT+AGG + chr3_1:8930105-8930124 None:intergenic 35.0%
TTCACTCACCTATCAGTATT+CGG + chr3_1:8930178-8930197 None:intergenic 35.0%
AAAAAGGAAATGGCTACCAT+CGG - chr3_1:8930204-8930223 Msa0347710:CDS 35.0%
! GATTGATGACTCACTAGTTT+AGG + chr3_1:8930366-8930385 None:intergenic 35.0%
TCATAGTCATTCCACTTCTT+AGG - chr3_1:8930418-8930437 Msa0347710:CDS 35.0%
TTGAGTCCAATAAAATAGGG+AGG + chr3_1:8930464-8930483 None:intergenic 35.0%
GATATGAGCTACATTGAAGT+AGG + chr3_1:8930495-8930514 None:intergenic 35.0%
! ATCAAGTTTTTCCCTCTGTT+TGG - chr3_1:8930653-8930672 Msa0347710:CDS 35.0%
GTATTAACAGATCCAAACAG+AGG + chr3_1:8930668-8930687 None:intergenic 35.0%
AAACTACGGGAATAATGTCA+GGG + chr3_1:8930697-8930716 None:intergenic 35.0%
CGAATGTGAATTGAAACTAC+GGG + chr3_1:8930710-8930729 None:intergenic 35.0%
GGACTGTAATGACATTAAGT+TGG + chr3_1:8930739-8930758 None:intergenic 35.0%
! TTTTCGATAAATGGTTTCCC+TGG - chr3_1:8930899-8930918 Msa0347710:CDS 35.0%
!! TTGCATTAGTTTGTCATCCA+GGG + chr3_1:8930919-8930938 None:intergenic 35.0%
ACTTTAGTCAGGAAAATGAC+TGG + chr3_1:8930954-8930973 None:intergenic 35.0%
GCAATGACATTACTTTAGTC+AGG + chr3_1:8930965-8930984 None:intergenic 35.0%
AGTAATGTCATTGCATTTCC+AGG - chr3_1:8930971-8930990 Msa0347710:CDS 35.0%
AACTTCAGCAACATAAAACC+TGG + chr3_1:8930992-8931011 None:intergenic 35.0%
CATCATGTGCAAATACTCAA+GGG + chr3_1:8931022-8931041 None:intergenic 35.0%
CTTGAGTATTTGCACATGAT+GGG - chr3_1:8931021-8931040 Msa0347710:five_prime_UTR 35.0%
! TGTATATCGAGATCTAAAGC+CGG - chr3_1:8931047-8931066 Msa0347710:five_prime_UTR 35.0%
GAAGATGGTTTGACTAACAT+TGG + chr3_1:8931147-8931166 None:intergenic 35.0%
! TCATTTGATGGACCTTTGAA+GGG + chr3_1:8931504-8931523 None:intergenic 35.0%
! ATCATTTGATGGACCTTTGA+AGG + chr3_1:8931505-8931524 None:intergenic 35.0%
CTTGCATGAAAACTGACTAT+AGG + chr3_1:8931576-8931595 None:intergenic 35.0%
TTCATGCAAGAGATTTGATC+AGG - chr3_1:8931586-8931605 Msa0347710:intron 35.0%
TCATGCAAGAGATTTGATCA+GGG - chr3_1:8931587-8931606 Msa0347710:intron 35.0%
AAGGATCCTGAAAATCGATT+AGG - chr3_1:8931621-8931640 Msa0347710:intron 35.0%
!! ATCGAACCTAATCGATTTTC+AGG + chr3_1:8931630-8931649 None:intergenic 35.0%
GGAGAATGCAAATGATTTAG+AGG - chr3_1:8931785-8931804 Msa0347710:five_prime_UTR 35.0%
AGTGTTACAAGGATGAAAAC+AGG + chr3_1:8931897-8931916 None:intergenic 35.0%
AAGGAAATACGATGATGTCT+TGG - chr3_1:8932010-8932029 Msa0347710:five_prime_UTR 35.0%
AGGAAATACGATGATGTCTT+GGG - chr3_1:8932011-8932030 Msa0347710:five_prime_UTR 35.0%
! GACAGAGATGATAGTGAATG+AGG + chr3_1:8927323-8927342 None:intergenic 40.0%
! AGTTTTCCCTCACATTCCTT+TGG - chr3_1:8927456-8927475 Msa0347710:CDS 40.0%
GAATTTCAGTCCAACTGAAG+AGG + chr3_1:8927916-8927935 None:intergenic 40.0%
TCACTCAATTCTGCTCAATC+CGG - chr3_1:8928026-8928045 Msa0347710:CDS 40.0%
GACTCACATAGAGAATTGCA+AGG + chr3_1:8928079-8928098 None:intergenic 40.0%
!! CATGTGAGATAGTGGAATAC+AGG - chr3_1:8928179-8928198 Msa0347710:intron 40.0%
TTGTAGGAACAACTACTCTG+AGG + chr3_1:8928241-8928260 None:intergenic 40.0%
!! AGGAAAAAGGTACTCGATTG+AGG - chr3_1:8928264-8928283 Msa0347710:intron 40.0%
CGCAACAGAGTTCTCTTAAA+AGG - chr3_1:8928356-8928375 Msa0347710:intron 40.0%
GATTAAAGTTTGTCCGTCTC+AGG - chr3_1:8928381-8928400 Msa0347710:intron 40.0%
! AGTGCCTGCTTTAAACTAAC+AGG + chr3_1:8928430-8928449 None:intergenic 40.0%
! AGTTTAAAGCAGGCACTTAG+AGG - chr3_1:8928433-8928452 Msa0347710:intron 40.0%
!! TCATCAAGAGTATCAGAGGT+TGG - chr3_1:8928517-8928536 Msa0347710:intron 40.0%
TGTAGATATCTCTGGCACTA+GGG + chr3_1:8928569-8928588 None:intergenic 40.0%
CCAGAGATATCTACACTTTC+CGG - chr3_1:8928574-8928593 Msa0347710:intron 40.0%
TGCTACATCGGGAAATTTAC+CGG + chr3_1:8928596-8928615 None:intergenic 40.0%
AATTGTTCCTCTTTCACCTG+AGG - chr3_1:8928705-8928724 Msa0347710:intron 40.0%
TTGTCTCAGTTCTTCAATGC+CGG - chr3_1:8928804-8928823 Msa0347710:intron 40.0%
CTATCATTGCTAGAACTAGG+TGG + chr3_1:8928868-8928887 None:intergenic 40.0%
CCACTATCATTGCTAGAACT+AGG + chr3_1:8928871-8928890 None:intergenic 40.0%
!! CCTAGTTCTAGCAATGATAG+TGG - chr3_1:8928868-8928887 Msa0347710:intron 40.0%
!! TTCTAGCAATGATAGTGGAG+TGG - chr3_1:8928873-8928892 Msa0347710:intron 40.0%
!! TCTAGCAATGATAGTGGAGT+GGG - chr3_1:8928874-8928893 Msa0347710:intron 40.0%
! GTTTTGCCAAACATGTGCTA+AGG + chr3_1:8928912-8928931 None:intergenic 40.0%
CGCTACTAGTAGTTTCAACA+AGG - chr3_1:8928999-8929018 Msa0347710:intron 40.0%
AGTAGGGATTCAAGTAAACC+TGG - chr3_1:8929123-8929142 Msa0347710:intron 40.0%
TCAGAGCTCAAAAAGTAGCA+TGG - chr3_1:8929233-8929252 Msa0347710:intron 40.0%
CAGAGCTCAAAAAGTAGCAT+GGG - chr3_1:8929234-8929253 Msa0347710:intron 40.0%
AGTGAAGAGAGCAATCTTAG+TGG - chr3_1:8929285-8929304 Msa0347710:intron 40.0%
ACATGTCAAAACACTCGAGA+TGG - chr3_1:8929334-8929353 Msa0347710:intron 40.0%
CATGTCAAAACACTCGAGAT+GGG - chr3_1:8929335-8929354 Msa0347710:intron 40.0%
! GCCTAAAGTGCCTCAAATTT+AGG + chr3_1:8929395-8929414 None:intergenic 40.0%
TTTAGGCTGATAAGGAAGCT+TGG - chr3_1:8929408-8929427 Msa0347710:intron 40.0%
TAAGCTCTCTTGCTTGGTTA+TGG - chr3_1:8929620-8929639 Msa0347710:CDS 40.0%
!! TTGGTTATGGAGTATTGTCC+AGG - chr3_1:8929633-8929652 Msa0347710:CDS 40.0%
! GCAAACATACAGGAGCTTTT+CGG - chr3_1:8929683-8929702 Msa0347710:CDS 40.0%
TAATCTTGCTTGGAAAGGGA+TGG - chr3_1:8929785-8929804 Msa0347710:CDS 40.0%
TGGGCTTAAGTCCTAACAAT+TGG - chr3_1:8930091-8930110 Msa0347710:CDS 40.0%
! TTGGTGCTTTCATTGAGAGT+TGG - chr3_1:8930110-8930129 Msa0347710:CDS 40.0%
TTTCATTGAGAGTTGGACCA+CGG - chr3_1:8930117-8930136 Msa0347710:CDS 40.0%
AACACCTTAATCCAGCCTAT+AGG + chr3_1:8930152-8930171 None:intergenic 40.0%
GTGTTTCACCGAATACTGAT+AGG - chr3_1:8930167-8930186 Msa0347710:CDS 40.0%
! GATGGTAGCCATTTCCTTTT+TGG + chr3_1:8930205-8930224 None:intergenic 40.0%
AAAAGGAAATGGCTACCATC+GGG - chr3_1:8930205-8930224 Msa0347710:CDS 40.0%
! GATGACTCACTAGTTTAGGA+AGG + chr3_1:8930362-8930381 None:intergenic 40.0%
ATAAAATAGGGAGGCCCAAA+AGG + chr3_1:8930455-8930474 None:intergenic 40.0%
! TTTGGGCCTCCCTATTTTAT+TGG - chr3_1:8930455-8930474 Msa0347710:CDS 40.0%
GAGCTACATTGAAGTAGGAT+TGG + chr3_1:8930490-8930509 None:intergenic 40.0%
TAAGAACTCTGATACGAGCA+AGG + chr3_1:8930517-8930536 None:intergenic 40.0%
GCTGGAGTAAATACCCTAAT+TGG - chr3_1:8930548-8930567 Msa0347710:CDS 40.0%
GAAACTACGGGAATAATGTC+AGG + chr3_1:8930698-8930717 None:intergenic 40.0%
!! CTTGCATTAGTTTGTCATCC+AGG + chr3_1:8930920-8930939 None:intergenic 40.0%
CCATCATGTGCAAATACTCA+AGG + chr3_1:8931023-8931042 None:intergenic 40.0%
CCTTGAGTATTTGCACATGA+TGG - chr3_1:8931020-8931039 Msa0347710:five_prime_UTR 40.0%
! TCGCGTACTAGGATATTTTC+CGG + chr3_1:8931069-8931088 None:intergenic 40.0%
AATATCCTAGTACGCGAAGA+TGG - chr3_1:8931072-8931091 Msa0347710:five_prime_UTR 40.0%
! AGGATTGGAGGTTTTCTTTG+CGG + chr3_1:8931184-8931203 None:intergenic 40.0%
GGCAAAATCTCGAAAGATGA+AGG - chr3_1:8931290-8931309 Msa0347710:intron 40.0%
ATCATCAAAAGTGAGGGACA+TGG - chr3_1:8931417-8931436 Msa0347710:intron 40.0%
TATGGAAAGACTCCCTTCAA+AGG - chr3_1:8931489-8931508 Msa0347710:intron 40.0%
!! TAGGAGTACCTGGAAACTTA+AGG + chr3_1:8931557-8931576 None:intergenic 40.0%
!! AAACTGACTATAGGAGTACC+TGG + chr3_1:8931567-8931586 None:intergenic 40.0%
CATGCAAGAGATTTGATCAG+GGG - chr3_1:8931588-8931607 Msa0347710:intron 40.0%
! GATCAGGGGATTGTTGATAA+AGG - chr3_1:8931602-8931621 Msa0347710:intron 40.0%
AAACAGCATCCCTTCTTTGA+AGG - chr3_1:8931669-8931688 Msa0347710:intron 40.0%
TTCCAAAATCGCGAAACTTG+GGG + chr3_1:8931737-8931756 None:intergenic 40.0%
GTTCCAAAATCGCGAAACTT+GGG + chr3_1:8931738-8931757 None:intergenic 40.0%
AGTTCCAAAATCGCGAAACT+TGG + chr3_1:8931739-8931758 None:intergenic 40.0%
! GGAGCCTGTTAGTTTAAAGC+AGG - chr3_1:8928423-8928442 Msa0347710:intron 45.0%
TAGAGGATTGTGCATCTCTC+AGG - chr3_1:8928450-8928469 Msa0347710:intron 45.0%
CATCTCTCAGGCATCAGAAA+TGG - chr3_1:8928462-8928481 Msa0347710:intron 45.0%
!! CAGCTCATCAAGAGTATCAG+AGG - chr3_1:8928513-8928532 Msa0347710:intron 45.0%
!! AAGAGTATCAGAGGTTGGCA+CGG - chr3_1:8928522-8928541 Msa0347710:intron 45.0%
GTGTAGATATCTCTGGCACT+AGG + chr3_1:8928570-8928589 None:intergenic 45.0%
! CCGGAAAGTGTAGATATCTC+TGG + chr3_1:8928577-8928596 None:intergenic 45.0%
!! AAGCTTGTTGCATTGACCAC+AGG + chr3_1:8928649-8928668 None:intergenic 45.0%
CAAGATTTACTCGACGTAGC+AGG + chr3_1:8928787-8928806 None:intergenic 45.0%
CAGTTCTTCAATGCCGGATA+AGG - chr3_1:8928810-8928829 Msa0347710:intron 45.0%
! TTTTTCTCCCGGTCCTTATC+CGG + chr3_1:8928826-8928845 None:intergenic 45.0%
CTCAAGCCTTAGCACATGTT+TGG - chr3_1:8928903-8928922 Msa0347710:intron 45.0%
TGATTTGAACTGCACGGAGA+TGG + chr3_1:8929075-8929094 None:intergenic 45.0%
!!! CTCGAGTGTTTTGACATGTG+CGG + chr3_1:8929333-8929352 None:intergenic 45.0%
! TGAGGCACTTTAGGCTGATA+AGG - chr3_1:8929400-8929419 Msa0347710:intron 45.0%
CTGATAAGGAAGCTTGGTAG+TGG - chr3_1:8929414-8929433 Msa0347710:intron 45.0%
!! AAGCTTGGTAGTGGAGACAT+TGG - chr3_1:8929423-8929442 Msa0347710:intron 45.0%
TACGACTAAGCTCTCTTGCT+TGG - chr3_1:8929614-8929633 Msa0347710:CDS 45.0%
!! GTTATGGAGTATTGTCCAGG+CGG - chr3_1:8929636-8929655 Msa0347710:CDS 45.0%
TGCGACAGAAGCAAACATAC+AGG - chr3_1:8929673-8929692 Msa0347710:CDS 45.0%
AAGCAGCTAGGTAGGGTTTA+TGG - chr3_1:8929709-8929728 Msa0347710:CDS 45.0%
TTATGTGCCTGAAACTCAGC+AGG - chr3_1:8929891-8929910 Msa0347710:CDS 45.0%
! AACTCAGCAGGATGCTGATT+AGG - chr3_1:8929903-8929922 Msa0347710:CDS 45.0%
GATGTGGTACTTAAGCCTTG+AGG - chr3_1:8930024-8930043 Msa0347710:CDS 45.0%
TGTTAGGACTTAAGCCCATG+AGG + chr3_1:8930089-8930108 None:intergenic 45.0%
GCTACCTATAGGCTGGATTA+AGG - chr3_1:8930145-8930164 Msa0347710:CDS 45.0%
TGAAGCCGCCAAAAAGGAAA+TGG - chr3_1:8930194-8930213 Msa0347710:CDS 45.0%
! GGTAGCCATTTCCTTTTTGG+CGG + chr3_1:8930202-8930221 None:intergenic 45.0%
TATGTCCATCTTCGCGTACT+AGG + chr3_1:8931080-8931099 None:intergenic 45.0%
TTTCTTTGCGGCATCTGCAT+CGG + chr3_1:8931172-8931191 None:intergenic 45.0%
AAAACCTCCAATCCTTGCTC+AGG - chr3_1:8931189-8931208 Msa0347710:intron 45.0%
AAACCTCCAATCCTTGCTCA+GGG - chr3_1:8931190-8931209 Msa0347710:intron 45.0%
AATCCGGTTGGAGACAGAAA+GGG + chr3_1:8931230-8931249 None:intergenic 45.0%
AAGCACGAAACTTGCCAATC+CGG + chr3_1:8931246-8931265 None:intergenic 45.0%
GCTCCTATTCTATTGTCTCC+CGG - chr3_1:8931267-8931286 Msa0347710:intron 45.0%
CTCCTATTCTATTGTCTCCC+GGG - chr3_1:8931268-8931287 Msa0347710:intron 45.0%
TCCTATTCTATTGTCTCCCG+GGG - chr3_1:8931269-8931288 Msa0347710:intron 45.0%
! ATCTTTCGAGATTTTGCCCC+GGG + chr3_1:8931288-8931307 None:intergenic 45.0%
! CATCTTTCGAGATTTTGCCC+CGG + chr3_1:8931289-8931308 None:intergenic 45.0%
TCAACTACAAGCTGTGGAAG+TGG + chr3_1:8931339-8931358 None:intergenic 45.0%
TAGTTGAGCCTACCAATGCA+CGG - chr3_1:8931352-8931371 Msa0347710:intron 45.0%
TCCGGAGATCATCAAAAGTG+AGG - chr3_1:8931410-8931429 Msa0347710:intron 45.0%
!! CCCTCACTTTTGATGATCTC+CGG + chr3_1:8931414-8931433 None:intergenic 45.0%
CCGGAGATCATCAAAAGTGA+GGG - chr3_1:8931411-8931430 Msa0347710:intron 45.0%
GACATGGAAACGCTGTAGAT+TGG - chr3_1:8931433-8931452 Msa0347710:intron 45.0%
ATGGAAACGCTGTAGATTGG+TGG - chr3_1:8931436-8931455 Msa0347710:intron 45.0%
!! GCTGTAGATTGGTGGACTTT+CGG - chr3_1:8931444-8931463 Msa0347710:intron 45.0%
CAGTTGAGGCCTTCAAAGAA+GGG + chr3_1:8931681-8931700 None:intergenic 45.0%
! CTTCTTTGAAGGCCTCAACT+GGG - chr3_1:8931680-8931699 Msa0347710:five_prime_UTR 45.0%
TGGAACTAGTGCTCCATCTA+TGG - chr3_1:8931752-8931771 Msa0347710:five_prime_UTR 45.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr3_1:8927243-8927262 None:intergenic 50.0%
CTCAATTCTGCTCAATCCGG+AGG - chr3_1:8928029-8928048 Msa0347710:CDS 50.0%
!! ATCCACAAAGGAGCATCCTC+CGG + chr3_1:8928048-8928067 None:intergenic 50.0%
CCAATTCCAGAAGCCTGAGA+CGG + chr3_1:8928397-8928416 None:intergenic 50.0%
GGTTGGCACGGTAAAGAAGT+TGG - chr3_1:8928534-8928553 Msa0347710:intron 50.0%
GCTTCAACCTCAGGTGAAAG+AGG + chr3_1:8928715-8928734 None:intergenic 50.0%
CTTTCACCTGAGGTTGAAGC+TGG - chr3_1:8928715-8928734 Msa0347710:intron 50.0%
TCTGACCTCTAGCACTTCCT+CGG + chr3_1:8928758-8928777 None:intergenic 50.0%
CTTCAATGCCGGATAAGGAC+CGG - chr3_1:8928815-8928834 Msa0347710:intron 50.0%
TTCAATGCCGGATAAGGACC+GGG - chr3_1:8928816-8928835 Msa0347710:intron 50.0%
ACTACTAGTAGCGCAGCTTG+AGG + chr3_1:8928992-8929011 None:intergenic 50.0%
!! GTTTTGACATGTGCGGTCGT+TGG + chr3_1:8929326-8929345 None:intergenic 50.0%
CTTGCTTGGAAAGGGATGGA+AGG - chr3_1:8929789-8929808 Msa0347710:CDS 50.0%
TGGAAAGGGATGGAAGGTCA+TGG - chr3_1:8929795-8929814 Msa0347710:CDS 50.0%
GGAAAGGGATGGAAGGTCAT+GGG - chr3_1:8929796-8929815 Msa0347710:CDS 50.0%
TCAGCATCCTGCTGAGTTTC+AGG + chr3_1:8929901-8929920 None:intergenic 50.0%
CAATAGGTGGGAGAACCTCA+AGG + chr3_1:8930042-8930061 None:intergenic 50.0%
CTTGAGGTTCTCCCACCTAT+TGG - chr3_1:8930040-8930059 Msa0347710:CDS 50.0%
!! TTTGGGTTTGGCTCTCCTCA+TGG - chr3_1:8930071-8930090 Msa0347710:CDS 50.0%
!! TTGGGTTTGGCTCTCCTCAT+GGG - chr3_1:8930072-8930091 Msa0347710:CDS 50.0%
TTGAGAGTTGGACCACGGAA+AGG - chr3_1:8930122-8930141 Msa0347710:CDS 50.0%
TGAGAGTTGGACCACGGAAA+GGG - chr3_1:8930123-8930142 Msa0347710:CDS 50.0%
CTCTATTGACACTGACCCGA+TGG + chr3_1:8930223-8930242 None:intergenic 50.0%
TTCTTTGCGGCATCTGCATC+GGG + chr3_1:8931171-8931190 None:intergenic 50.0%
AACCTCCAATCCTTGCTCAG+GGG - chr3_1:8931191-8931210 Msa0347710:intron 50.0%
ACACCCTTTCTGTCTCCAAC+CGG - chr3_1:8931224-8931243 Msa0347710:intron 50.0%
CAATCCGGTTGGAGACAGAA+AGG + chr3_1:8931231-8931250 None:intergenic 50.0%
CTTTCTGTCTCCAACCGGAT+TGG - chr3_1:8931229-8931248 Msa0347710:intron 50.0%
ACGAAACTTGCCAATCCGGT+TGG + chr3_1:8931242-8931261 None:intergenic 50.0%
GCTGACATAGCTGCTCAAGT+TGG - chr3_1:8931312-8931331 Msa0347710:intron 50.0%
GTAGGCTCAACTACAAGCTG+TGG + chr3_1:8931345-8931364 None:intergenic 50.0%
! GAGTTAGACCGTGCATTGGT+AGG + chr3_1:8931363-8931382 None:intergenic 50.0%
GAAGGAGTTAGACCGTGCAT+TGG + chr3_1:8931367-8931386 None:intergenic 50.0%
TCGGAGAGCCTTAAGTTTCC+AGG - chr3_1:8931546-8931565 Msa0347710:intron 50.0%
CCAGTTGAGGCCTTCAAAGA+AGG + chr3_1:8931682-8931701 None:intergenic 50.0%
! CCTTCTTTGAAGGCCTCAAC+TGG - chr3_1:8931679-8931698 Msa0347710:five_prime_UTR 50.0%
! GCCTCAACTGGGCTCTAATA+CGG - chr3_1:8931691-8931710 Msa0347710:five_prime_UTR 50.0%
ACCGTATTAGAGCCCAGTTG+AGG + chr3_1:8931695-8931714 None:intergenic 50.0%
! CTCCCCAAGTTTCGCGATTT+TGG - chr3_1:8931732-8931751 Msa0347710:five_prime_UTR 50.0%
TCCATCTATGGCTGCACAGA+AGG - chr3_1:8931764-8931783 Msa0347710:five_prime_UTR 50.0%
TCCTTCTGTGCAGCCATAGA+TGG + chr3_1:8931768-8931787 None:intergenic 50.0%
ATCCGGAGGATGCTCCTTTG+TGG - chr3_1:8928043-8928062 Msa0347710:CDS 55.0%
GTTTGTCCGTCTCAGGCTTC+TGG - chr3_1:8928388-8928407 Msa0347710:intron 55.0%
!! CCGTCTCAGGCTTCTGGAAT+TGG - chr3_1:8928394-8928413 Msa0347710:intron 55.0%
!! GGCTTCTGGAATTGGCATCG+CGG - chr3_1:8928402-8928421 Msa0347710:intron 55.0%
TGCTTGCCAGCTTCAACCTC+AGG + chr3_1:8928724-8928743 None:intergenic 55.0%
CAAGCAAACGCTACGAACCG+AGG - chr3_1:8928738-8928757 Msa0347710:intron 55.0%
!! ACGAACCGAGGAAGTGCTAG+AGG - chr3_1:8928750-8928769 Msa0347710:intron 55.0%
CTTAGTGGTTCGAGTCGCAG+TGG - chr3_1:8929300-8929319 Msa0347710:intron 55.0%
CGTGCGATTCAACAGCAGCA+TGG - chr3_1:8929366-8929385 Msa0347710:intron 55.0%
! GCTTTTCGGAGCAAGCAGCT+AGG - chr3_1:8929697-8929716 Msa0347710:CDS 55.0%
TTCGGAGCAAGCAGCTAGGT+AGG - chr3_1:8929701-8929720 Msa0347710:CDS 55.0%
TCGGAGCAAGCAGCTAGGTA+GGG - chr3_1:8929702-8929721 Msa0347710:CDS 55.0%
CCTATAGGTAGCCCTTTCCG+TGG + chr3_1:8930137-8930156 None:intergenic 55.0%
CCACGGAAAGGGCTACCTAT+AGG - chr3_1:8930134-8930153 Msa0347710:CDS 55.0%
GGAAAGGGCTACCTATAGGC+TGG - chr3_1:8930138-8930157 Msa0347710:CDS 55.0%
GGTGAGTGAAGCCGCCAAAA+AGG - chr3_1:8930188-8930207 Msa0347710:CDS 55.0%
CAATAGAGTGAAAGCCGCCG+TGG - chr3_1:8930235-8930254 Msa0347710:CDS 55.0%
! CCTTTAAGAGCCGACGTCCA+CGG + chr3_1:8930255-8930274 None:intergenic 55.0%
GCATCTGCATCGGGTGAAGA+TGG + chr3_1:8931162-8931181 None:intergenic 55.0%
ACTAGCCCCTGAGCAAGGAT+TGG + chr3_1:8931199-8931218 None:intergenic 55.0%
ATGCAACTAGCCCCTGAGCA+AGG + chr3_1:8931204-8931223 None:intergenic 55.0%
GCCCCGGGAGACAATAGAAT+AGG + chr3_1:8931273-8931292 None:intergenic 55.0%
GCACGGTCTAACTCCTTCGT+TGG - chr3_1:8931369-8931388 Msa0347710:intron 55.0%
! CTGGGCTCTAATACGGTGTG+CGG - chr3_1:8931698-8931717 Msa0347710:five_prime_UTR 55.0%
AGCACATGCAGATCACCGCC+TGG + chr3_1:8929654-8929673 None:intergenic 60.0%
TTAAGAGCCGACGTCCACGG+CGG + chr3_1:8930252-8930271 None:intergenic 60.0%
!! CCGTGGACGTCGGCTCTTAA+AGG - chr3_1:8930252-8930271 Msa0347710:CDS 60.0%
AGCCCCTGAGCAAGGATTGG+AGG + chr3_1:8931196-8931215 None:intergenic 60.0%
AATACGGTGTGCGGCACCAC+CGG - chr3_1:8931707-8931726 Msa0347710:five_prime_UTR 60.0%
TCGCGAAACTTGGGGAGCTC+CGG + chr3_1:8931729-8931748 None:intergenic 60.0%
GTGAAAGCCGCCGTGGACGT+CGG - chr3_1:8930242-8930261 Msa0347710:CDS 65.0%
CGAAACTTGGGGAGCTCCGG+TGG + chr3_1:8931726-8931745 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 8927130 8932037 8927130 ID=Msa0347710;Name=Msa0347710
chr3_1 mRNA 8927130 8932037 8927130 ID=Msa0347710-mRNA-1;Parent=Msa0347710;Name=Msa0347710-mRNA-1;_AED=0.02;_eAED=0.02;_QI=538|1|1|1|0.5|0.33|3|195|802
chr3_1 exon 8927130 8928174 8927130 ID=Msa0347710-mRNA-1:exon:2604;Parent=Msa0347710-mRNA-1
chr3_1 exon 8929449 8931184 8929449 ID=Msa0347710-mRNA-1:exon:2603;Parent=Msa0347710-mRNA-1
chr3_1 exon 8931677 8932037 8931677 ID=Msa0347710-mRNA-1:exon:2602;Parent=Msa0347710-mRNA-1
chr3_1 five_prime_UTR 8931677 8932037 8931677 ID=Msa0347710-mRNA-1:five_prime_utr;Parent=Msa0347710-mRNA-1
chr3_1 five_prime_UTR 8931008 8931184 8931008 ID=Msa0347710-mRNA-1:five_prime_utr;Parent=Msa0347710-mRNA-1
chr3_1 CDS 8929449 8931007 8929449 ID=Msa0347710-mRNA-1:cds;Parent=Msa0347710-mRNA-1
chr3_1 CDS 8927325 8928174 8927325 ID=Msa0347710-mRNA-1:cds;Parent=Msa0347710-mRNA-1
chr3_1 three_prime_UTR 8927130 8927324 8927130 ID=Msa0347710-mRNA-1:three_prime_utr;Parent=Msa0347710-mRNA-1
Gene Sequence

>Msa0347710

ATGAATGCATCTAGCAATACATGTGAGATAGTGGAATACAGGGAAGAGATATTTCCCGAGTTCGAAACAGATGAAAAGCCTCAGAGTAGTTGTTCCTACAAATCAGGAAAAAGGTACTCGATTGAGGCTGATATTGATCGTCTTTTCAAGGCTATTGAGATTAAAAGTTCATCTAGAATTCATAGTACTTCGCGGTCGCAACAGAGTTCTCTTAAAAGGCCGATTAAAGTTTGTCCGTCTCAGGCTTCTGGAATTGGCATCGCGGAGCCTGTTAGTTTAAAGCAGGCACTTAGAGGATTGTGCATCTCTCAGGCATCAGAAATGGCTGCATTGAAGAGAGTATCAAAGCAATGCAGCTCATCAAGAGTATCAGAGGTTGGCACGGTAAAGAAGTTGGTTGAAATCTCCCTAGTGCCAGAGATATCTACACTTTCCGGTAAATTTCCCGATGTAGCAATATCAAGTTCAAGTGCTAATCATTCTATTCCTGTGGTCAATGCAACAAGCTTAACAGAAATGACAACTAGGTTTGTGTCCCAAGATCAAATTGTTCCTCTTTCACCTGAGGTTGAAGCTGGCAAGCAAACGCTACGAACCGAGGAAGTGCTAGAGGTCAGAATGAATCCTGCTACGTCGAGTAAATCTTGTCTCAGTTCTTCAATGCCGGATAAGGACCGGGAGAAAAATTTTCATTGTGCATCTTGTCCACCTAGTTCTAGCAATGATAGTGGAGTGGGCAAAAACTCAAGCCTTAGCACATGTTTGGCAAAACCAATATTCAATAACATGAACTTCCTTAAGAAAAAGGTAAAGAAAGATCAATGTTCTGCCTCAAGCTGCGCTACTAGTAGTTTCAACAAGGAGAATGGAAATTCTGATCTTAAGCATGATATTAAAGAAAATGACGATAAACCATCTCCGTGCAGTTCAAATCATAGCATTGAAGTTAACTCAATTAATGTTAGTAGGGATTCAAGTAAACCTGGTTTTAGTTTGAATTTCAGTAAGAAAACTAAGTTTCTTGTTACAAAAGTTGACGAAAAATCAAGATCAAAGGAAAAGGGTGAGTTCTCTCAGAGCTCAAAAAGTAGCATGGGTGAGTATAGTACTAGTAGCACAAGTATCAGTGAAGAGAGCAATCTTAGTGGTTCGAGTCGCAGTGGCCAACGACCGCACATGTCAAAACACTCGAGATGGGAAGCTATTCGTGCGATTCAACAGCAGCATGGTAACCTAAATTTGAGGCACTTTAGGCTGATAAGGAAGCTTGGTAGTGGAGACATTGGAACCGTTTATCTTGCAGAACTAATTGGTACTAGTTGCCTTTTTGCACTGAAAGTTATGGACAATGAATTTTTGGCTAGCAGGAAGAAAACATTTAGAGTTCAAACTGAAAGAGAGATCCTTCAAATGTTGGATCATCCATTTCTTCCTACACTATATTCCCATATTACTACGACTAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGCGGTGATCTGCATGTGCTGCGACAGAAGCAAACATACAGGAGCTTTTCGGAGCAAGCAGCTAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTTGAGTATTTGCACATGATGGGAGTTGTATATCGAGATCTAAAGCCGGAAAATATCCTAGTACGCGAAGATGGACATATTATGCTGACAGATTTTGACTTGTCACTCAGATGTTCTGTCAATCCAATGTTAGTCAAACCATCTTCACCCGATGCAGATGCCGCAAAGAAAACCTCCAATCCTTGCTCAGGGGCTAGTTGCATACACCCTTTCTGTCTCCAACCGGATTGGCAAGTTTCGTGCTTTGCTCCTATTCTATTGTCTCCCGGGGCAAAATCTCGAAAGATGAAGGCTGACATAGCTGCTCAAGTTGGTCCACTTCCACAGCTTGTAGTTGAGCCTACCAATGCACGGTCTAACTCCTTCGTTGGAACATATGAATATCTTGCTCCGGAGATCATCAAAAGTGAGGGACATGGAAACGCTGTAGATTGGTGGACTTTCGGTATATTTTTGTTTGAGCTTTTATATGGAAAGACTCCCTTCAAAGGTCCATCAAATGATGATACATTATCAAATGTTGTGTCGGAGAGCCTTAAGTTTCCAGGTACTCCTATAGTCAGTTTTCATGCAAGAGATTTGATCAGGGGATTGTTGATAAAGGATCCTGAAAATCGATTAGGTTCGATAAAAGGTGCTGCAGAAATAAAACAGCATCCCTTCTTTGAAGGCCTCAACTGGGCTCTAATACGGTGTGCGGCACCACCGGAGCTCCCCAAGTTTCGCGATTTTGGAACTAGTGCTCCATCTATGGCTGCACAGAAGGAGAATGCAAATGATTTAGAGGATATAGATGATTGTGAAGAGTTTGAGCTTTTTTAG
Protein sequence

>Msa0347710

MNASSNTCEIVEYREEIFPEFETDEKPQSSCSYKSGKRYSIEADIDRLFKAIEIKSSSRIHSTSRSQQSSLKRPIKVCPSQASGIGIAEPVSLKQALRGLCISQASEMAALKRVSKQCSSSRVSEVGTVKKLVEISLVPEISTLSGKFPDVAISSSSANHSIPVVNATSLTEMTTRFVSQDQIVPLSPEVEAGKQTLRTEEVLEVRMNPATSSKSCLSSSMPDKDREKNFHCASCPPSSSNDSGVGKNSSLSTCLAKPIFNNMNFLKKKVKKDQCSASSCATSSFNKENGNSDLKHDIKENDDKPSPCSSNHSIEVNSINVSRDSSKPGFSLNFSKKTKFLVTKVDEKSRSKEKGEFSQSSKSSMGEYSTSSTSISEESNLSGSSRSGQRPHMSKHSRWEAIRAIQQQHGNLNLRHFRLIRKLGSGDIGTVYLAELIGTSCLFALKVMDNEFLASRKKTFRVQTEREILQMLDHPFLPTLYSHITTTKLSCLVMEYCPGGDLHVLRQKQTYRSFSEQAARFYVAEVLLALEYLHMMGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKPSSPDADAAKKTSNPCSGASCIHPFCLQPDWQVSCFAPILLSPGAKSRKMKADIAAQVGPLPQLVVEPTNARSNSFVGTYEYLAPEIIKSEGHGNAVDWWTFGIFLFELLYGKTPFKGPSNDDTLSNVVSESLKFPGTPIVSFHARDLIRGLLIKDPENRLGSIKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGTSAPSMAAQKENANDLEDIDDCEEFELF*