AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0351680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0351680 MtrunA17_Chr3g0086661 98.869 442 5 0 1 442 1 442 0.0 903
Msa0351680 MtrunA17_Chr3g0086651 97.964 442 9 0 1 442 1 442 0.0 899
Msa0351680 MtrunA17_Chr3g0086691 79.864 442 89 0 1 442 1 442 0.0 717
Msa0351680 MtrunA17_Chr4g0061381 71.396 444 120 4 1 442 1 439 0.0 650
Msa0351680 MtrunA17_Chr3g0094171 46.911 437 227 2 6 442 14 445 5.61e-150 436
Msa0351680 MtrunA17_Chr3g0094231 47.482 417 211 5 26 442 30 438 7.47e-144 420
Msa0351680 MtrunA17_Chr8g0344151 44.552 413 219 5 32 442 36 440 2.42e-123 368
Msa0351680 MtrunA17_Chr8g0344181 43.961 414 220 6 32 442 38 442 4.62e-117 352
Msa0351680 MtrunA17_Chr8g0344191 41.309 443 245 8 4 442 43 474 8.73e-113 342
Msa0351680 MtrunA17_Chr3g0116681 40.639 438 242 8 11 442 14 439 4.70e-108 328
Msa0351680 MtrunA17_Chr6g0484841 41.247 417 224 6 33 442 38 440 1.84e-107 327
Msa0351680 MtrunA17_Chr4g0030701 40.941 425 230 5 30 442 33 448 4.77e-107 327
Msa0351680 MtrunA17_Chr4g0058191 39.080 435 245 8 11 442 9 426 2.24e-106 323
Msa0351680 MtrunA17_Chr5g0431641 39.723 433 243 5 13 442 19 436 3.26e-106 323
Msa0351680 MtrunA17_Chr7g0235551 38.702 447 252 7 3 442 13 444 8.49e-105 320
Msa0351680 MtrunA17_Chr4g0058231 38.009 442 251 5 11 442 9 437 1.64e-104 319
Msa0351680 MtrunA17_Chr4g0057001 42.093 430 237 5 15 442 33 452 3.43e-104 319
Msa0351680 MtrunA17_Chr2g0310391 38.652 445 249 8 1 442 6 429 4.53e-103 315
Msa0351680 MtrunA17_Chr2g0310381 40.338 414 232 6 32 442 28 429 1.35e-102 314
Msa0351680 MtrunA17_Chr3g0101601 39.956 453 236 10 2 442 5 433 3.34e-102 313
Msa0351680 MtrunA17_Chr8g0372251 39.723 433 230 10 22 442 28 441 5.46e-102 313
Msa0351680 MtrunA17_Chr4g0047661 40.431 418 230 7 32 442 48 453 6.02e-102 313
Msa0351680 MtrunA17_Chr1g0156101 39.120 432 246 7 21 442 23 447 1.00e-101 312
Msa0351680 MtrunA17_Chr3g0101581 36.937 444 257 7 8 442 9 438 1.16e-101 312
Msa0351680 MtrunA17_Chr6g0484811 39.857 419 228 7 33 442 38 441 2.68e-101 311
Msa0351680 MtrunA17_Chr3g0101621 40.757 449 237 10 1 442 1 427 6.53e-101 310
Msa0351680 MtrunA17_Chr8g0382901 39.810 422 238 5 23 442 483 890 8.79e-101 322
Msa0351680 MtrunA17_Chr8g0382901 38.462 442 232 6 3 442 8 411 2.39e-96 310
Msa0351680 MtrunA17_Chr8g0390881 40.431 418 227 8 33 442 37 440 1.03e-100 310
Msa0351680 MtrunA17_Chr1g0174461 38.609 417 240 6 33 442 36 443 1.77e-100 309
Msa0351680 MtrunA17_Chr3g0101631 39.121 455 241 11 1 442 1 432 1.79e-100 309
Msa0351680 MtrunA17_Chr8g0356001 40.449 445 234 8 11 442 16 442 1.18e-99 307
Msa0351680 MtrunA17_Chr7g0258221 37.220 446 258 6 3 442 13 442 2.62e-99 306
Msa0351680 MtrunA17_Chr3g0101721 37.923 443 249 9 10 442 13 439 3.07e-99 306
Msa0351680 MtrunA17_Chr1g0174481 38.337 433 255 6 13 442 15 438 4.33e-99 305
Msa0351680 MtrunA17_Chr3g0101711 37.472 451 254 9 1 442 9 440 7.28e-99 305
Msa0351680 MtrunA17_Chr4g0058201 38.152 422 247 6 23 442 19 428 1.99e-98 303
Msa0351680 MtrunA17_Chr3g0101571 37.500 416 239 7 32 442 36 435 2.69e-98 303
Msa0351680 MtrunA17_Chr7g0254641 37.709 419 248 6 32 442 37 450 3.25e-98 303
Msa0351680 MtrunA17_Chr4g0030711 38.443 411 235 4 43 442 48 451 6.91e-98 303
Msa0351680 MtrunA17_Chr5g0431671 37.264 424 247 5 23 442 29 437 8.62e-98 302
Msa0351680 MtrunA17_Chr4g0047641 38.702 416 237 7 32 442 50 452 1.86e-97 301
Msa0351680 MtrunA17_Chr3g0101691 37.500 448 255 9 5 442 9 441 3.88e-97 300
Msa0351680 MtrunA17_Chr5g0446161 37.862 449 252 10 3 442 6 436 4.30e-97 300
Msa0351680 MtrunA17_Chr3g0101611 37.972 424 240 6 26 442 32 439 4.75e-97 300
Msa0351680 MtrunA17_Chr5g0445461 37.188 441 258 6 6 442 11 436 4.84e-97 300
Msa0351680 MtrunA17_Chr4g0011921 37.955 440 262 4 5 442 2 432 8.00e-97 299
Msa0351680 MtrunA17_Chr1g0174441 38.717 421 237 9 33 442 55 465 8.37e-97 300
Msa0351680 MtrunA17_Chr5g0403351 35.556 450 261 9 5 442 7 439 1.58e-96 299
Msa0351680 MtrunA17_Chr3g0084921 35.778 450 269 7 2 442 9 447 1.71e-96 299
Msa0351680 MtrunA17_Chr4g0047631 39.220 436 239 9 13 442 33 448 1.93e-96 299
Msa0351680 MtrunA17_Chr1g0162811 37.808 447 253 9 4 442 7 436 3.24e-96 298
Msa0351680 MtrunA17_Chr1g0207841 38.835 412 230 5 43 442 49 450 6.69e-96 298
Msa0351680 MtrunA17_Chr6g0472311 36.508 441 254 7 16 442 24 452 7.08e-96 297
Msa0351680 MtrunA17_Chr7g0224551 37.333 450 251 8 5 442 8 438 1.25e-95 297
Msa0351680 MtrunA17_Chr1g0160851 36.465 447 265 7 1 442 1 433 1.45e-95 296
Msa0351680 MtrunA17_Chr5g0445441 36.117 443 260 7 6 442 52 477 4.06e-95 296
Msa0351680 MtrunA17_Chr4g0039901 37.857 420 243 6 27 442 30 435 5.74e-95 295
Msa0351680 MtrunA17_Chr1g0205361 38.073 436 247 8 14 442 14 433 6.58e-95 294
Msa0351680 MtrunA17_Chr8g0361471 39.810 422 225 9 32 442 34 437 8.78e-95 294
Msa0351680 MtrunA17_Chr3g0101731 36.508 441 249 9 13 442 17 437 9.46e-95 294
Msa0351680 MtrunA17_Chr5g0446151 38.824 425 238 9 22 442 31 437 1.12e-94 294
Msa0351680 MtrunA17_Chr4g0024771 37.358 439 256 6 8 442 13 436 1.38e-94 293
Msa0351680 MtrunA17_Chr7g0224561 37.333 450 251 8 5 442 8 438 1.65e-94 294
Msa0351680 MtrunA17_Chr5g0403331 36.967 422 239 9 32 442 35 440 2.47e-94 293
Msa0351680 MtrunA17_Chr1g0164211 38.795 415 235 5 32 442 31 430 3.20e-94 293
Msa0351680 MtrunA17_Chr4g0020041 36.607 448 259 9 4 442 7 438 3.32e-94 293
Msa0351680 MtrunA17_Chr3g0116741 37.387 444 253 10 5 442 27 451 3.47e-94 293
Msa0351680 MtrunA17_Chr3g0101651 37.470 419 239 7 32 442 38 441 7.95e-94 292
Msa0351680 MtrunA17_Chr4g0047691 38.702 416 234 7 32 442 52 451 1.07e-93 292
Msa0351680 MtrunA17_Chr7g0246221 37.783 442 258 6 6 442 10 439 1.55e-93 291
Msa0351680 MtrunA17_Chr8g0362481 38.421 380 224 6 67 442 1 374 1.96e-93 289
Msa0351680 MtrunA17_Chr5g0445421 37.045 440 239 6 6 442 85 489 2.56e-93 292
Msa0351680 MtrunA17_Chr5g0445531 37.589 423 245 6 23 442 29 435 2.68e-93 290
Msa0351680 MtrunA17_Chr3g0101811 36.887 469 249 12 1 442 4 452 3.08e-93 291
Msa0351680 MtrunA17_Chr5g0445381 36.404 445 262 7 2 442 40 467 4.82e-93 291
Msa0351680 MtrunA17_Chr1g0174451 37.470 419 242 9 33 442 37 444 4.83e-93 290
Msa0351680 MtrunA17_Chr3g0101671 38.530 449 243 8 11 442 9 441 5.26e-93 290
Msa0351680 MtrunA17_Chr1g0156081 39.627 429 243 7 24 442 49 471 6.55e-93 290
Msa0351680 MtrunA17_Chr4g0011961 35.862 435 265 6 11 442 8 431 6.61e-93 289
Msa0351680 MtrunA17_Chr7g0218601 37.585 439 244 10 16 442 15 435 9.16e-93 289
Msa0351680 MtrunA17_Chr3g0101661 37.307 453 255 11 2 442 5 440 1.11e-92 289
Msa0351680 MtrunA17_Chr7g0218611 38.588 425 246 7 22 442 23 436 1.15e-92 288
Msa0351680 MtrunA17_Chr4g0056951 41.542 402 222 5 44 442 56 447 1.42e-92 289
Msa0351680 MtrunA17_Chr8g0362701 36.139 404 248 6 43 442 46 443 2.56e-92 288
Msa0351680 MtrunA17_Chr1g0162801 39.732 448 244 11 5 442 8 439 2.68e-92 288
Msa0351680 MtrunA17_Chr6g0466331 39.100 422 228 9 32 442 34 437 2.95e-92 288
Msa0351680 MtrunA17_Chr6g0463801 38.015 413 238 6 32 442 37 433 3.81e-92 287
Msa0351680 MtrunA17_Chr6g0465511 39.100 422 228 9 32 442 34 437 5.74e-92 287
Msa0351680 MtrunA17_Chr5g0445451 34.842 442 269 6 5 442 10 436 8.10e-92 286
Msa0351680 MtrunA17_Chr4g0058281 37.215 438 256 6 11 442 25 449 9.10e-92 287
Msa0351680 MtrunA17_Chr1g0167321 39.910 446 242 8 7 442 7 436 9.74e-92 286
Msa0351680 MtrunA17_Chr3g0101701 37.116 423 242 8 29 442 34 441 1.72e-91 286
Msa0351680 MtrunA17_Chr4g0008101 36.504 452 266 7 7 442 15 461 2.17e-91 286
Msa0351680 MtrunA17_Chr2g0314721 37.441 422 246 5 25 442 37 444 3.16e-91 285
Msa0351680 MtrunA17_Chr5g0395331 38.785 428 242 9 23 442 25 440 3.55e-91 285
Msa0351680 MtrunA17_Chr8g0355961 39.468 451 242 8 4 442 11 442 4.09e-91 285
Msa0351680 MtrunA17_Chr1g0174471 35.885 418 249 6 34 442 52 459 4.85e-91 285
Msa0351680 MtrunA17_Chr6g0451781 37.415 441 251 8 18 442 63 494 9.37e-91 286
Msa0351680 MtrunA17_Chr4g0058261 36.891 431 244 7 22 442 55 467 9.99e-91 285
Msa0351680 MtrunA17_Chr6g0451691 36.543 457 265 9 6 442 14 465 1.63e-90 284
Msa0351680 MtrunA17_Chr4g0011901 36.941 425 255 6 21 442 18 432 2.95e-90 282
Msa0351680 MtrunA17_Chr6g0451751 36.771 446 259 8 13 442 23 461 3.35e-90 283
Msa0351680 MtrunA17_Chr5g0405001 38.810 420 232 8 33 442 45 449 3.46e-90 283
Msa0351680 MtrunA17_Chr1g0200961 38.839 448 253 9 1 442 1 433 4.73e-90 282
Msa0351680 MtrunA17_Chr5g0430111 36.879 423 251 6 7 422 11 424 4.77e-90 280
Msa0351680 MtrunA17_Chr5g0430081 37.557 442 253 8 11 442 10 438 5.99e-90 282
Msa0351680 MtrunA17_Chr5g0403321 35.484 434 250 7 23 442 25 442 6.63e-90 281
Msa0351680 MtrunA17_Chr5g0430101 36.530 438 258 7 11 442 14 437 6.74e-90 281
Msa0351680 MtrunA17_Chr5g0430131 36.080 449 261 6 7 442 4 439 9.81e-90 281
Msa0351680 MtrunA17_Chr5g0401681 35.981 428 266 3 1 426 1 422 1.66e-89 280
Msa0351680 MtrunA17_Chr4g0035921 35.570 447 256 7 13 442 18 449 3.48e-89 280
Msa0351680 MtrunA17_Chr2g0314731 35.973 442 260 6 10 442 6 433 3.58e-89 279
Msa0351680 MtrunA17_Chr7g0255531 35.347 447 269 7 1 442 1 432 6.22e-89 279
Msa0351680 MtrunA17_Chr3g0101821 37.955 440 249 8 11 442 14 437 9.24e-89 279
Msa0351680 MtrunA17_Chr3g0101761 38.322 441 248 8 10 442 13 437 1.15e-88 278
Msa0351680 MtrunA17_Chr5g0430091 36.667 450 258 8 7 442 4 440 1.17e-88 278
Msa0351680 MtrunA17_Chr5g0430031 34.889 450 266 6 7 442 4 440 1.22e-88 278
Msa0351680 MtrunA17_Chr1g0205371 37.162 444 261 7 2 442 6 434 1.29e-88 278
Msa0351680 MtrunA17_Chr7g0265611 36.073 438 258 7 13 442 30 453 1.63e-88 278
Msa0351680 MtrunA17_Chr5g0395321 37.002 427 239 7 23 442 30 433 4.20e-88 278
Msa0351680 MtrunA17_Chr5g0419691 36.893 412 249 4 33 442 30 432 7.68e-88 276
Msa0351680 MtrunA17_Chr4g0076161 35.477 451 260 11 5 442 7 439 2.75e-87 275
Msa0351680 MtrunA17_Chr5g0431511 36.779 416 248 7 32 442 33 438 3.50e-87 275
Msa0351680 MtrunA17_Chr3g0101831 37.194 449 257 9 3 442 6 438 6.38e-87 274
Msa0351680 MtrunA17_Chr6g0451741 35.385 455 271 8 6 442 34 483 1.05e-86 275
Msa0351680 MtrunA17_Chr4g0053621 35.920 451 262 7 1 442 1 433 1.13e-86 273
Msa0351680 MtrunA17_Chr3g0101751 38.549 441 247 8 10 442 20 444 1.96e-86 273
Msa0351680 MtrunA17_Chr1g0176831 34.978 446 267 6 1 442 37 463 3.13e-86 272
Msa0351680 MtrunA17_Chr2g0304871 34.513 452 277 8 4 442 7 452 3.48e-86 273
Msa0351680 MtrunA17_Chr7g0246131 37.188 441 267 3 5 442 7 440 2.01e-85 270
Msa0351680 MtrunA17_Chr8g0357421 37.029 451 259 10 1 442 3 437 4.02e-85 269
Msa0351680 MtrunA17_Chr4g0011981 37.198 414 245 7 33 442 30 432 7.73e-85 268
Msa0351680 MtrunA17_Chr4g0011871 35.922 412 254 4 33 442 30 433 7.85e-85 268
Msa0351680 MtrunA17_Chr4g0052851 39.000 400 220 7 32 426 33 413 1.33e-84 268
Msa0351680 MtrunA17_Chr7g0246151 38.600 443 256 6 5 442 7 438 4.32e-84 266
Msa0351680 MtrunA17_Chr7g0258211 36.569 443 267 6 5 442 15 448 4.84e-84 266
Msa0351680 MtrunA17_Chr4g0011881 35.765 425 261 5 20 442 18 432 5.30e-84 266
Msa0351680 MtrunA17_Chr6g0451641 35.398 452 272 11 2 442 12 454 6.10e-84 267
Msa0351680 MtrunA17_Chr8g0357431 37.387 444 249 10 10 442 13 438 9.25e-84 266
Msa0351680 MtrunA17_Chr5g0406651 38.152 422 244 7 26 442 24 433 9.89e-84 265
Msa0351680 MtrunA17_Chr2g0280261 39.518 415 229 7 32 442 34 430 1.52e-83 265
Msa0351680 MtrunA17_Chr7g0246121 38.497 439 258 5 5 442 9 436 2.57e-83 265
Msa0351680 MtrunA17_Chr6g0466941 35.635 449 269 8 8 442 13 455 3.04e-83 265
Msa0351680 MtrunA17_Chr4g0052861 35.597 427 260 6 5 426 6 422 9.84e-83 263
Msa0351680 MtrunA17_Chr3g0101741 37.368 380 213 7 67 442 1 359 1.01e-82 261
Msa0351680 MtrunA17_Chr6g0466901 34.821 448 273 8 8 442 13 454 1.29e-82 263
Msa0351680 MtrunA17_Chr4g0052881 36.364 429 258 5 1 426 7 423 1.63e-82 262
Msa0351680 MtrunA17_Chr5g0395381 35.857 449 231 10 1 442 10 408 2.68e-82 261
Msa0351680 MtrunA17_Chr3g0101801 36.054 441 258 9 10 442 20 444 3.25e-82 262
Msa0351680 MtrunA17_Chr5g0401691 34.895 427 255 8 5 427 33 440 4.70e-82 261
Msa0351680 MtrunA17_Chr3g0082701 34.136 457 275 7 6 442 12 462 7.81e-82 261
Msa0351680 MtrunA17_Chr5g0431501 36.298 416 250 6 32 442 33 438 9.22e-82 261
Msa0351680 MtrunA17_Chr5g0431461 36.298 416 250 6 32 442 33 438 9.22e-82 261
Msa0351680 MtrunA17_Chr6g0463791 32.960 446 274 10 5 442 7 435 9.58e-81 258
Msa0351680 MtrunA17_Chr4g0046321 32.944 428 255 10 30 442 32 442 3.02e-80 257
Msa0351680 MtrunA17_Chr4g0046351 32.243 428 258 10 30 442 32 442 3.50e-79 254
Msa0351680 MtrunA17_Chr4g0046631 35.814 430 252 9 25 442 39 456 4.03e-79 254
Msa0351680 MtrunA17_Chr4g0046331 31.729 457 275 11 6 442 5 444 1.77e-78 253
Msa0351680 MtrunA17_Chr8g0339311 34.550 411 259 7 40 442 52 460 3.58e-78 252
Msa0351680 MtrunA17_Chr1g0197891 35.440 443 261 9 7 442 7 431 6.48e-78 250
Msa0351680 MtrunA17_Chr1g0197871 34.234 444 265 9 7 442 7 431 1.14e-77 249
Msa0351680 MtrunA17_Chr1g0213671 37.143 420 245 7 32 442 34 443 1.53e-77 250
Msa0351680 MtrunA17_Chr4g0017411 36.493 422 235 8 11 426 16 410 3.03e-77 248
Msa0351680 MtrunA17_Chr1g0197881 35.294 442 262 9 7 442 7 430 1.19e-76 247
Msa0351680 MtrunA17_Chr4g0039391 35.770 383 238 4 42 421 45 422 4.05e-76 246
Msa0351680 MtrunA17_Chr1g0197851 35.697 423 249 8 25 442 27 431 4.79e-76 245
Msa0351680 MtrunA17_Chr2g0296651 33.718 433 275 5 8 434 4 430 1.51e-75 244
Msa0351680 MtrunA17_Chr7g0246181 37.624 404 238 5 43 442 45 438 6.63e-75 243
Msa0351680 MtrunA17_Chr2g0296661 37.500 384 229 4 44 421 44 422 7.77e-75 243
Msa0351680 MtrunA17_Chr8g0351801 33.971 418 252 7 42 442 44 454 5.65e-73 238
Msa0351680 MtrunA17_Chr6g0458561 31.735 438 286 9 13 442 33 465 7.87e-72 235
Msa0351680 MtrunA17_Chr8g0339331 31.871 433 285 9 17 442 23 452 1.54e-71 234
Msa0351680 MtrunA17_Chr5g0419451 34.597 422 250 10 27 442 55 456 1.37e-70 232
Msa0351680 MtrunA17_Chr3g0107611 32.594 451 278 8 13 442 24 469 7.86e-67 223
Msa0351680 MtrunA17_Chr8g0370651 31.121 437 278 7 2 422 13 442 1.06e-66 222
Msa0351680 MtrunA17_Chr8g0370641 32.401 429 274 8 7 422 13 438 1.27e-66 221
Msa0351680 MtrunA17_Chr8g0377341 33.333 411 256 8 35 442 70 465 4.80e-65 218
Msa0351680 MtrunA17_Chr6g0451681 31.066 441 237 9 7 442 36 414 6.81e-65 216
Msa0351680 MtrunA17_Chr1g0200951 34.135 416 254 11 35 442 64 467 1.27e-64 216
Msa0351680 MtrunA17_Chr3g0086671 88.393 112 9 1 187 298 1 108 2.68e-64 203
Msa0351680 MtrunA17_Chr5g0432751 31.850 427 269 9 26 442 27 441 1.18e-63 213
Msa0351680 MtrunA17_Chr3g0107541 31.969 391 253 5 41 422 59 445 1.53e-62 211
Msa0351680 MtrunA17_Chr8g0346261 35.308 422 236 13 34 442 86 483 1.16e-61 209
Msa0351680 MtrunA17_Chr3g0086681 83.654 104 17 0 339 442 1 104 1.07e-58 190
Msa0351680 MtrunA17_Chr5g0431591 40.336 238 136 3 207 442 21 254 2.74e-58 194
Msa0351680 MtrunA17_Chr1g0210091 31.311 412 262 11 41 442 74 474 3.53e-56 194
Msa0351680 MtrunA17_Chr1g0160861 37.634 279 157 6 167 442 10 274 5.29e-55 186
Msa0351680 MtrunA17_Chr6g0477081 39.676 247 133 2 168 414 12 242 3.16e-51 173
Msa0351680 MtrunA17_Chr5g0445751 35.052 291 175 6 16 303 28 307 6.05e-51 174
Msa0351680 MtrunA17_Chr5g0430071 39.113 248 139 7 203 442 50 293 1.83e-50 174
Msa0351680 MtrunA17_Chr1g0198191 29.195 435 287 11 5 430 20 442 5.25e-50 177
Msa0351680 MtrunA17_Chr5g0446101 38.868 265 144 6 179 442 2 249 1.74e-48 168
Msa0351680 MtrunA17_Chr4g0030741 33.562 292 173 4 41 326 73 349 1.13e-46 164
Msa0351680 MtrunA17_Chr4g0058211 50.355 141 66 1 302 442 18 154 3.07e-46 159
Msa0351680 MtrunA17_Chr6g0451811 52.778 144 66 1 299 442 1 142 2.33e-45 156
Msa0351680 MtrunA17_Chr4g0011931 31.741 293 193 3 11 301 8 295 2.62e-44 156
Msa0351680 MtrunA17_Chr1g0174431 50.350 143 67 2 303 442 1 142 5.65e-44 153
Msa0351680 MtrunA17_Chr1g0174421 29.747 316 207 6 3 313 22 327 2.90e-43 155
Msa0351680 MtrunA17_Chr4g0011861 30.627 271 182 3 33 301 30 296 6.67e-43 153
Msa0351680 MtrunA17_Chr2g0310351 47.857 140 69 1 303 442 1 136 6.47e-42 147
Msa0351680 MtrunA17_Chr6g0451771 50.694 144 69 1 299 442 18 159 6.61e-41 145
Msa0351680 MtrunA17_Chr4g0011941 50.714 140 65 1 303 442 1 136 8.16e-41 144
Msa0351680 MtrunA17_Chr5g0402971 31.690 284 176 6 33 304 41 318 4.66e-40 145
Msa0351680 MtrunA17_Chr8g0387101 29.167 456 297 9 1 442 1 444 4.82e-40 150
Msa0351680 MtrunA17_Chr8g0364651 27.015 459 288 12 4 442 5 436 1.36e-39 148
Msa0351680 MtrunA17_Chr2g0280071 26.932 453 309 7 1 442 34 475 1.54e-39 151
Msa0351680 MtrunA17_Chr4g0011851 46.309 149 76 1 294 442 7 151 3.25e-39 140
Msa0351680 MtrunA17_Chr4g0046691 30.620 258 169 5 33 288 40 289 5.27e-39 142
Msa0351680 MtrunA17_Chr4g0046681 45.270 148 75 2 295 442 27 168 7.39e-39 140
Msa0351680 MtrunA17_Chr1g0156061 42.130 216 115 5 232 442 193 403 2.09e-38 145
Msa0351680 MtrunA17_Chr1g0156061 44.966 149 79 2 21 168 46 192 9.97e-35 134
Msa0351680 MtrunA17_Chr2g0280081 28.105 459 300 9 1 442 498 943 4.19e-38 147
Msa0351680 MtrunA17_Chr2g0280081 27.533 454 305 8 1 442 1 442 5.05e-34 135
Msa0351680 MtrunA17_Chr5g0409051 25.325 462 310 14 1 442 1 447 2.27e-37 142
Msa0351680 MtrunA17_Chr3g0101591 47.101 138 69 1 305 442 41 174 5.00e-37 135
Msa0351680 MtrunA17_Chr1g0207851 31.734 271 166 4 43 301 49 312 1.03e-36 138
Msa0351680 MtrunA17_Chr1g0176851 34.156 243 146 4 119 357 2 234 3.71e-36 133
Msa0351680 MtrunA17_Chr4g0074581 25.785 446 306 12 11 442 47 481 7.09e-36 139
Msa0351680 MtrunA17_Chr8g0390871 44.595 148 76 4 296 442 20 162 3.45e-35 130
Msa0351680 MtrunA17_Chr5g0430171 32.489 237 140 3 7 235 4 228 4.26e-35 130
Msa0351680 MtrunA17_Chr2g0334021 26.161 409 274 10 27 422 30 423 4.64e-35 136
Msa0351680 MtrunA17_Chr4g0046661 46.259 147 77 1 296 442 18 162 7.10e-35 129
Msa0351680 MtrunA17_Chr2g0280121 27.136 398 269 7 56 442 61 448 1.59e-34 134
Msa0351680 MtrunA17_Chr4g0046671 28.378 296 189 5 11 288 15 305 1.74e-34 130
Msa0351680 MtrunA17_Chr2g0314781 48.387 124 60 1 319 442 1 120 2.07e-34 126
Msa0351680 MtrunA17_Chr5g0402981 48.462 130 64 2 314 442 3 130 5.79e-34 126
Msa0351680 MtrunA17_Chr2g0280041 27.851 456 301 10 1 442 33 474 1.25e-33 132
Msa0351680 MtrunA17_Chr3g0105751 28.324 346 234 7 4 341 20 359 2.42e-33 129
Msa0351680 MtrunA17_Chr5g0413911 25.917 436 288 11 32 442 42 467 3.10e-33 131
Msa0351680 MtrunA17_Chr6g0463621 44.056 143 73 3 303 442 1 139 3.94e-33 124
Msa0351680 MtrunA17_Chr5g0445761 50.000 140 66 1 303 442 1 136 1.51e-32 122
Msa0351680 MtrunA17_Chr5g0445371 34.826 201 96 3 242 442 1 166 2.19e-32 123
Msa0351680 MtrunA17_Chr6g0451801 29.373 303 188 8 6 288 14 310 2.98e-32 125
Msa0351680 MtrunA17_Chr6g0463611 27.174 276 185 6 5 274 21 286 3.68e-32 124
Msa0351680 MtrunA17_Chr8g0372591 38.028 142 88 0 301 442 1 142 9.94e-31 115
Msa0351680 MtrunA17_Chr3g0107561 29.964 277 179 6 32 298 45 316 3.27e-30 119
Msa0351680 MtrunA17_Chr5g0423621 41.129 124 69 1 319 442 1 120 3.16e-28 110
Msa0351680 MtrunA17_Chr2g0310371 42.017 119 69 0 32 150 28 146 5.20e-28 108
Msa0351680 MtrunA17_Chr5g0445411 35.849 159 98 3 6 160 17 175 1.06e-27 108
Msa0351680 MtrunA17_Chr3g0107551 40.833 120 71 0 303 422 5 124 3.02e-27 108
Msa0351680 MtrunA17_Chr4g0046701 50.515 97 46 1 346 442 2 96 7.03e-27 105
Msa0351680 MtrunA17_Chr5g0445351 46.903 113 56 1 330 442 51 159 1.22e-26 106
Msa0351680 MtrunA17_Chr3g0101541 56.180 89 35 2 354 442 4 88 7.31e-26 102
Msa0351680 MtrunA17_Chr3g0105761 39.669 121 71 1 306 426 3 121 9.00e-25 101
Msa0351680 MtrunA17_Chr5g0431631 38.519 135 80 2 8 139 25 159 9.34e-25 99.8
Msa0351680 MtrunA17_Chr2g0280011 40.164 122 68 1 306 422 11 132 1.70e-24 100
Msa0351680 MtrunA17_Chr2g0280061 40.984 122 67 1 306 422 11 132 4.51e-24 99.8
Msa0351680 MtrunA17_Chr8g0351401 27.874 348 188 13 114 425 117 437 1.19e-23 103
Msa0351680 MtrunA17_Chr3g0135841 25.612 449 277 13 34 442 44 475 1.98e-23 102
Msa0351680 MtrunA17_Chr5g0429651 25.285 439 263 16 35 438 30 438 3.76e-22 99.0
Msa0351680 MtrunA17_Chr8g0364631 27.483 433 282 12 27 442 27 444 4.03e-22 98.6
Msa0351680 MtrunA17_Chr6g0484771 37.903 124 77 0 67 190 1 124 5.23e-22 91.7
Msa0351680 MtrunA17_Chr0c19g0493771 25.441 397 253 15 63 442 218 588 1.45e-21 97.8
Msa0351680 MtrunA17_Chr1g0151221 24.270 445 283 17 34 442 41 467 1.74e-21 97.1
Msa0351680 MtrunA17_Chr3g0116721 32.828 198 117 7 139 329 2 190 4.31e-21 90.9
Msa0351680 MtrunA17_Chr6g0451761 27.682 289 180 6 7 288 13 279 6.51e-21 92.4
Msa0351680 MtrunA17_Chr4g0038271 24.672 458 274 17 8 425 62 488 6.66e-21 95.5
Msa0351680 MtrunA17_Chr7g0248991 28.076 317 192 12 121 421 55 351 1.36e-20 92.8
Msa0351680 MtrunA17_Chr5g0430051 40.367 109 64 1 2 110 9 116 1.37e-20 87.0
Msa0351680 MtrunA17_Chr2g0293411 25.776 419 239 12 32 421 41 416 1.46e-20 94.0
Msa0351680 MtrunA17_Chr4g0056981 56.944 72 31 0 329 400 1 72 4.93e-20 84.0
Msa0351680 MtrunA17_Chr5g0444981 46.457 127 63 2 316 442 24 145 5.48e-20 88.2
Msa0351680 MtrunA17_Chr3g0117321 36.134 119 76 0 32 150 7 125 5.57e-20 85.5
Msa0351680 MtrunA17_Chr5g0430041 40.000 115 64 2 329 442 1 111 6.48e-20 87.0
Msa0351680 MtrunA17_Chr8g0348751 23.195 457 282 15 5 422 7 433 1.47e-19 91.3
Msa0351680 MtrunA17_Chr3g0117301 41.573 89 48 1 354 442 1 85 2.95e-19 83.2
Msa0351680 MtrunA17_Chr8g0351391 24.776 335 218 11 110 422 112 434 4.51e-19 89.7
Msa0351680 MtrunA17_Chr8g0381571 32.275 189 115 5 241 421 235 418 5.70e-19 89.0
Msa0351680 MtrunA17_Chr5g0396521 27.979 193 129 3 239 422 282 473 6.22e-19 89.4
Msa0351680 MtrunA17_Chr8g0381541 32.275 189 115 5 241 421 235 418 7.87e-19 88.6
Msa0351680 MtrunA17_Chr1g0164321 24.065 428 266 16 35 422 63 471 1.24e-18 88.2
Msa0351680 MtrunA17_Chr8g0371761 38.182 110 57 1 322 420 1 110 2.52e-18 81.6
Msa0351680 MtrunA17_Chr8g0351311 24.702 336 218 11 110 422 112 435 3.98e-18 86.7
Msa0351680 MtrunA17_Chr1g0204271 25.231 325 215 11 114 422 117 429 6.99e-18 85.9
Msa0351680 MtrunA17_Chr8g0351421 24.242 330 219 9 116 425 119 437 8.29e-18 85.5
Msa0351680 MtrunA17_Chr5g0431601 43.373 83 46 1 67 149 1 82 1.14e-17 77.4
Msa0351680 MtrunA17_Chr1g0203141 32.609 184 114 5 243 422 263 440 1.64e-17 84.7
Msa0351680 MtrunA17_Chr8g0351441 24.242 330 219 9 116 425 118 436 2.13e-17 84.3
Msa0351680 MtrunA17_Chr2g0293421 25.059 427 270 13 32 437 45 442 2.35e-17 84.3
Msa0351680 MtrunA17_Chr8g0387001 23.684 456 290 14 20 441 19 450 3.94e-17 83.6
Msa0351680 MtrunA17_Chr8g0351461 24.270 445 298 14 2 425 10 436 5.69e-17 83.2
Msa0351680 MtrunA17_Chr5g0430151 37.500 112 65 2 332 442 4 111 6.13e-17 78.6
Msa0351680 MtrunA17_Chr5g0445361 52.941 68 28 1 375 442 10 73 1.73e-16 76.3
Msa0351680 MtrunA17_Chr1g0203151 32.258 186 112 7 243 422 259 436 2.27e-16 81.3
Msa0351680 MtrunA17_Chr7g0214931 23.192 401 259 14 35 405 54 435 2.70e-16 80.9
Msa0351680 MtrunA17_Chr6g0449341 28.502 207 131 5 232 422 282 487 8.80e-16 79.7
Msa0351680 MtrunA17_Chr1g0164351 23.925 372 233 13 35 373 63 417 9.15e-16 79.0
Msa0351680 MtrunA17_Chr2g0314771 28.395 162 111 1 67 228 1 157 1.14e-15 74.3
Msa0351680 MtrunA17_Chr1g0163281 23.843 432 291 17 13 422 28 443 2.62e-15 78.2
Msa0351680 MtrunA17_Chr1g0179811 24.181 397 260 14 63 442 108 480 2.91e-15 77.8
Msa0351680 MtrunA17_Chr5g0445541 33.871 124 68 3 8 117 13 136 3.21e-15 72.4
Msa0351680 MtrunA17_Chr6g0449331 23.861 461 262 22 16 422 14 439 4.57e-15 77.4
Msa0351680 MtrunA17_Chr4g0030761 40.449 89 36 2 354 442 1 72 5.79e-15 72.0
Msa0351680 MtrunA17_Chr3g0104351 21.739 437 257 13 35 422 36 436 1.17e-14 75.9
Msa0351680 MtrunA17_Chr1g0163431 23.256 344 238 12 95 422 55 388 2.10e-14 74.7
Msa0351680 MtrunA17_Chr1g0176861 40.659 91 49 1 1 91 11 96 2.23e-14 68.9
Msa0351680 MtrunA17_Chr6g0449381 25.301 332 212 12 112 422 113 429 2.30e-14 75.1
Msa0351680 MtrunA17_Chr8g0339861 31.383 188 118 4 240 421 233 415 2.51e-14 74.7
Msa0351680 MtrunA17_Chr3g0089351 28.889 180 120 6 244 421 152 325 6.46e-14 73.2
Msa0351680 MtrunA17_Chr1g0163451 24.490 441 278 21 15 422 30 448 7.64e-14 73.6
Msa0351680 MtrunA17_Chr6g0449351 24.478 335 217 14 112 425 73 392 8.09e-14 73.2
Msa0351680 MtrunA17_Chr3g0116731 45.455 66 36 0 356 421 3 68 8.99e-14 68.2
Msa0351680 MtrunA17_Chr2g0310361 34.483 116 70 2 164 278 6 116 1.47e-13 67.8
Msa0351680 MtrunA17_Chr6g0472221 29.670 182 124 4 243 422 272 451 2.12e-13 72.0
Msa0351680 MtrunA17_Chr3g0141801 28.125 192 123 6 236 421 231 413 3.36e-13 71.2
Msa0351680 MtrunA17_Chr1g0184421 23.543 446 275 18 3 422 17 422 3.79e-13 71.2
Msa0351680 MtrunA17_Chr1g0163421 24.724 453 266 26 13 422 44 464 5.03e-13 70.9
Msa0351680 MtrunA17_Chr4g0076171 36.508 126 57 3 319 442 1 105 6.74e-13 66.6
Msa0351680 MtrunA17_Chr8g0372711 32.192 146 95 2 279 421 270 414 1.14e-12 69.7
Msa0351680 MtrunA17_Chr5g0445341 36.471 85 53 1 67 150 1 85 2.05e-12 62.8
Msa0351680 MtrunA17_Chr5g0400411 30.120 166 108 3 260 421 257 418 6.14e-12 67.4
Msa0351680 MtrunA17_Chr4g0076181 41.429 70 41 0 67 136 1 70 8.96e-12 63.2
Msa0351680 MtrunA17_Chr3g0089361 30.263 152 100 4 272 421 260 407 1.11e-11 66.6
Msa0351680 MtrunA17_Chr4g0004601 23.659 317 216 10 116 424 160 458 1.59e-11 66.2
Msa0351680 MtrunA17_Chr1g0193811 25.000 264 184 7 166 427 195 446 2.06e-11 65.9
Msa0351680 MtrunA17_Chr8g0372341 22.772 202 139 4 2 191 13 209 2.62e-11 63.2
Msa0351680 MtrunA17_Chr1g0163351 23.557 433 294 18 13 422 11 429 3.04e-11 65.5
Msa0351680 MtrunA17_Chr1g0163501 28.194 227 139 9 211 424 210 425 3.37e-11 65.1
Msa0351680 MtrunA17_Chr2g0313771 23.750 320 206 13 121 424 153 450 3.63e-11 65.1
Msa0351680 MtrunA17_Chr4g0063221 30.645 124 84 2 302 424 324 446 4.08e-11 65.1
Msa0351680 MtrunA17_Chr5g0400421 29.412 187 121 4 241 421 238 419 4.72e-11 64.7
Msa0351680 MtrunA17_Chr5g0443401 23.614 415 253 16 32 424 38 410 6.68e-11 64.3
Msa0351680 MtrunA17_Chr4g0004481 26.768 198 132 6 231 422 226 416 6.87e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0351680 AT5G07990.1 66.667 444 140 5 1 442 1 438 0.0 605
Msa0351680 AT5G06900.1 40.816 392 227 4 30 421 32 418 9.06e-105 320
Msa0351680 AT2G45550.1 39.866 449 244 10 5 442 10 443 4.66e-103 316
Msa0351680 AT3G26300.1 39.189 444 254 8 2 442 3 433 1.56e-99 306
Msa0351680 AT3G26310.1 39.414 444 250 9 3 442 4 432 1.68e-99 306
Msa0351680 AT2G45560.1 38.235 442 250 7 13 442 13 443 2.95e-96 298
Msa0351680 AT3G26330.1 38.741 413 239 5 33 442 32 433 3.44e-95 295
Msa0351680 AT4G36220.1 38.074 457 238 9 9 442 17 451 8.02e-95 295
Msa0351680 AT4G12320.1 36.795 443 268 5 6 442 13 449 6.02e-94 293
Msa0351680 AT1G01280.1 37.071 437 272 3 8 442 9 444 1.41e-93 291
Msa0351680 AT3G26180.1 37.111 450 262 10 1 442 1 437 3.14e-93 290
Msa0351680 AT3G48310.1 36.165 412 242 7 33 442 33 425 6.71e-93 289
Msa0351680 AT5G57260.1 38.942 416 238 6 33 442 31 436 7.56e-93 290
Msa0351680 AT3G26170.1 36.830 448 266 10 1 442 1 437 9.48e-93 289
Msa0351680 AT4G31940.1 36.876 461 258 11 7 442 4 456 9.51e-93 290
Msa0351680 AT3G48270.1 35.915 426 249 9 19 442 21 424 1.83e-92 288
Msa0351680 AT4G12300.1 37.923 443 264 4 1 442 15 447 4.07e-92 288
Msa0351680 AT2G40890.1 36.099 446 261 8 4 442 3 431 8.32e-92 287
Msa0351680 AT3G26230.1 37.277 448 256 10 3 442 5 435 1.24e-91 286
Msa0351680 AT3G48280.1 34.793 434 263 8 11 442 9 424 1.46e-91 286
Msa0351680 AT1G33720.1 38.427 445 245 10 13 442 13 443 1.48e-91 286
Msa0351680 AT3G26320.1 36.806 432 258 6 14 442 14 433 1.57e-91 286
Msa0351680 AT2G45570.1 39.024 410 230 7 41 442 47 444 6.39e-91 285
Msa0351680 AT1G13080.1 36.080 449 268 9 1 442 1 437 1.26e-90 284
Msa0351680 AT5G25180.1 36.323 446 263 7 1 442 1 429 1.56e-90 283
Msa0351680 AT4G37370.1 36.744 430 248 10 2 426 9 419 2.62e-90 283
Msa0351680 AT3G26280.1 37.264 424 249 9 26 442 26 439 2.98e-90 283
Msa0351680 AT3G26280.2 37.264 424 249 9 26 442 43 456 4.20e-90 283
Msa0351680 AT3G48300.1 36.740 411 239 7 34 442 31 422 6.04e-90 281
Msa0351680 AT3G48300.2 36.740 411 239 7 34 442 33 424 6.39e-90 281
Msa0351680 AT3G26210.1 37.897 409 235 6 41 442 40 436 3.16e-89 280
Msa0351680 AT3G26160.1 36.771 446 262 9 8 442 1 437 3.78e-89 280
Msa0351680 AT3G61040.1 38.313 415 235 7 33 442 34 432 3.85e-89 280
Msa0351680 AT4G13310.1 37.352 423 246 9 25 442 25 433 4.04e-89 280
Msa0351680 AT5G04330.1 37.882 425 236 11 31 442 31 440 1.70e-88 278
Msa0351680 AT1G13110.1 33.929 448 281 6 1 442 1 439 1.71e-88 278
Msa0351680 AT5G25120.1 36.689 447 260 7 1 442 1 429 2.16e-88 278
Msa0351680 AT4G12310.1 38.272 405 241 3 41 442 53 451 4.54e-88 278
Msa0351680 AT4G31970.1 35.358 461 264 11 7 442 4 455 9.14e-88 277
Msa0351680 AT5G25130.1 36.629 445 263 6 1 442 1 429 1.36e-87 276
Msa0351680 AT3G48290.1 35.915 426 250 10 20 442 21 426 1.08e-86 273
Msa0351680 AT4G37340.1 37.000 400 238 8 32 426 30 420 1.29e-86 273
Msa0351680 AT4G13290.1 36.256 422 244 8 25 442 26 426 2.23e-86 272
Msa0351680 AT3G25180.1 36.242 447 269 7 1 442 10 445 4.74e-86 272
Msa0351680 AT4G37330.1 37.736 424 241 9 8 426 12 417 6.93e-86 271
Msa0351680 AT2G30770.1 35.476 420 252 8 27 442 28 432 8.36e-86 271
Msa0351680 AT5G44620.1 37.182 433 260 5 12 442 28 450 8.52e-86 272
Msa0351680 AT1G13090.2 35.915 426 250 9 26 442 22 433 2.58e-85 270
Msa0351680 AT2G02580.1 38.839 448 250 8 2 442 3 433 2.76e-85 270
Msa0351680 AT3G26270.1 36.792 424 250 10 26 442 26 438 3.05e-85 270
Msa0351680 AT4G22690.1 37.129 404 243 5 41 442 93 487 4.38e-85 271
Msa0351680 AT5G57220.1 37.055 421 249 9 4 421 3 410 5.26e-85 269
Msa0351680 AT5G25140.1 34.978 446 269 6 1 442 1 429 9.33e-85 268
Msa0351680 AT4G37320.1 35.731 431 261 9 1 426 1 420 2.14e-84 267
Msa0351680 AT2G45580.1 36.275 408 242 6 42 442 48 444 2.22e-84 268
Msa0351680 AT4G22710.1 36.881 404 244 5 41 442 62 456 2.68e-84 268
Msa0351680 AT4G13770.1 32.215 447 286 8 1 442 1 435 4.21e-84 267
Msa0351680 AT3G48320.1 35.214 443 265 9 2 442 3 425 4.79e-84 266
Msa0351680 AT4G12330.1 37.531 405 240 5 41 442 55 449 1.07e-83 266
Msa0351680 AT3G52970.1 37.415 441 259 10 12 442 16 449 1.15e-83 266
Msa0351680 AT4G37360.1 35.529 425 253 11 11 426 8 420 5.69e-83 264
Msa0351680 AT3G26290.2 39.568 417 233 7 30 442 45 446 1.54e-82 263
Msa0351680 AT3G26290.1 39.568 417 233 7 30 442 32 433 1.58e-82 263
Msa0351680 AT3G52970.2 36.484 455 258 10 12 442 16 463 1.92e-82 263
Msa0351680 AT4G31500.1 34.507 426 268 6 20 442 17 434 6.22e-82 261
Msa0351680 AT3G26150.1 35.268 448 273 10 1 442 1 437 1.30e-81 260
Msa0351680 AT3G28740.1 36.580 421 245 8 26 442 33 435 1.42e-81 260
Msa0351680 AT4G37410.1 35.116 430 264 9 5 430 4 422 1.56e-81 260
Msa0351680 AT3G48290.2 33.850 452 250 11 20 442 21 452 7.11e-81 259
Msa0351680 AT4G31950.1 34.707 461 256 12 7 442 4 444 7.85e-81 259
Msa0351680 AT1G74540.1 37.352 423 228 9 32 442 27 424 8.88e-81 258
Msa0351680 AT1G74550.1 36.323 446 252 11 1 442 1 418 9.01e-81 258
Msa0351680 AT3G26190.1 35.731 417 252 9 32 442 28 434 1.58e-80 258
Msa0351680 AT3G26830.1 34.521 449 271 9 1 442 1 433 1.81e-80 257
Msa0351680 AT4G37430.1 33.333 447 274 11 3 442 2 431 2.85e-80 257
Msa0351680 AT1G11610.1 35.266 414 251 6 32 442 33 432 4.84e-80 256
Msa0351680 AT1G11610.2 35.266 414 251 6 32 442 33 432 7.03e-80 256
Msa0351680 AT4G20240.1 35.732 403 245 8 32 432 33 423 1.93e-79 253
Msa0351680 AT4G37310.1 35.071 422 262 8 13 427 12 428 3.21e-79 254
Msa0351680 AT3G44250.1 35.817 416 252 7 32 442 28 433 3.26e-79 254
Msa0351680 AT2G24180.1 36.145 415 250 7 32 442 36 439 6.35e-79 253
Msa0351680 AT3G20940.1 34.541 414 261 7 32 442 42 448 1.26e-78 253
Msa0351680 AT2G23190.1 35.059 425 262 8 1 421 45 459 1.35e-78 254
Msa0351680 AT5G36220.1 35.198 429 257 10 2 421 5 421 2.45e-78 252
Msa0351680 AT2G30750.1 35.294 425 257 7 22 442 22 432 3.16e-78 251
Msa0351680 AT1G13100.1 35.593 413 237 9 42 442 38 433 1.01e-77 250
Msa0351680 AT5G24950.1 33.094 417 257 8 32 442 32 432 1.49e-77 249
Msa0351680 AT5G06905.1 35.181 415 258 7 11 422 11 417 2.26e-77 250
Msa0351680 AT3G26200.1 35.012 417 255 8 32 442 28 434 3.26e-77 249
Msa0351680 AT4G37400.1 35.864 382 233 6 41 421 40 410 5.01e-77 248
Msa0351680 AT4G15360.1 34.685 444 271 10 5 442 14 444 5.88e-77 249
Msa0351680 AT2G42250.1 35.011 437 272 5 11 442 20 449 7.25e-77 248
Msa0351680 AT3G26220.1 36.878 442 257 13 11 442 9 438 1.53e-76 247
Msa0351680 AT3G53280.1 35.971 417 249 8 32 442 28 432 3.43e-76 246
Msa0351680 AT3G20950.1 34.521 449 277 10 2 442 12 451 2.43e-75 245
Msa0351680 AT2G23220.1 34.243 403 252 7 23 421 37 430 2.53e-75 244
Msa0351680 AT3G20090.2 34.328 402 255 6 43 442 54 448 4.02e-75 244
Msa0351680 AT5G67310.1 35.606 396 238 6 32 421 42 426 1.03e-74 243
Msa0351680 AT4G13310.2 35.904 376 227 7 25 396 25 390 1.72e-74 238
Msa0351680 AT4G39950.1 33.408 446 280 8 7 442 32 470 9.89e-74 241
Msa0351680 AT4G39950.2 33.408 446 280 8 7 442 72 510 3.10e-73 241
Msa0351680 AT3G32047.1 34.509 397 247 8 48 442 59 444 9.83e-73 237
Msa0351680 AT3G20110.1 34.597 422 262 8 5 422 12 423 1.40e-72 237
Msa0351680 AT2G22330.1 34.228 447 276 9 7 442 33 472 1.64e-72 238
Msa0351680 AT2G22330.2 34.228 447 276 9 7 442 56 495 2.70e-72 238
Msa0351680 AT3G20960.2 35.433 381 238 5 63 442 73 446 4.48e-72 236
Msa0351680 AT5G42590.1 33.409 440 278 8 5 442 6 432 3.34e-71 233
Msa0351680 AT2G14100.1 33.673 392 250 7 52 442 64 446 3.69e-71 234
Msa0351680 AT4G20240.2 35.849 371 225 7 32 401 33 391 6.36e-71 229
Msa0351680 AT5G10600.1 32.311 424 270 8 2 421 20 430 8.39e-71 233
Msa0351680 AT1G66540.1 37.975 316 183 5 115 426 1 307 1.10e-70 228
Msa0351680 AT4G15350.1 34.000 400 249 8 48 442 52 441 3.26e-70 231
Msa0351680 AT3G53300.1 34.928 418 254 11 32 442 28 434 4.49e-70 230
Msa0351680 AT1G33730.1 41.066 319 170 6 130 442 1 307 6.45e-70 226
Msa0351680 AT1G33730.2 41.066 319 170 6 130 442 1 307 6.45e-70 226
Msa0351680 AT5G24960.1 34.917 421 258 7 25 442 26 433 8.26e-70 229
Msa0351680 AT5G42580.1 34.501 371 224 7 52 422 60 411 9.84e-70 229
Msa0351680 AT1G01190.1 32.675 456 270 10 6 442 32 469 3.74e-69 229
Msa0351680 AT1G01190.2 32.675 456 270 10 6 442 37 474 4.32e-69 229
Msa0351680 AT5G05260.2 32.414 435 266 11 27 442 35 460 5.25e-69 228
Msa0351680 AT1G50520.1 32.642 386 248 7 41 422 52 429 6.46e-69 228
Msa0351680 AT1G33720.4 39.938 323 176 6 126 442 1 311 7.66e-69 223
Msa0351680 AT1G33720.3 39.938 323 176 6 126 442 1 311 7.66e-69 223
Msa0351680 AT1G33720.5 39.938 323 176 6 126 442 1 311 7.66e-69 223
Msa0351680 AT4G15330.1 33.484 442 274 10 6 442 15 441 8.36e-69 227
Msa0351680 AT5G10610.1 31.455 426 270 8 3 421 4 414 9.70e-69 227
Msa0351680 AT2G25160.1 33.408 449 278 11 7 442 11 451 1.93e-68 227
Msa0351680 AT3G61040.2 35.657 373 221 8 33 399 34 393 2.97e-68 223
Msa0351680 AT5G47990.1 33.163 392 252 6 53 442 64 447 3.42e-68 226
Msa0351680 AT3G20100.1 32.884 371 241 4 53 422 63 426 6.14e-68 225
Msa0351680 AT3G20130.1 33.422 377 240 6 48 422 59 426 6.37e-68 225
Msa0351680 AT2G05180.1 33.420 386 246 6 48 429 58 436 2.92e-67 221
Msa0351680 AT1G50560.1 33.496 409 252 10 43 442 54 451 3.93e-67 223
Msa0351680 AT3G20140.1 31.690 426 276 9 20 442 30 443 2.00e-66 221
Msa0351680 AT2G46660.1 35.012 417 242 10 34 442 72 467 4.45e-66 221
Msa0351680 AT5G09970.1 34.752 423 243 14 34 442 71 474 6.65e-65 218
Msa0351680 AT2G45580.3 33.702 362 226 5 42 396 48 402 9.42e-65 214
Msa0351680 AT5G35715.1 33.246 382 239 9 67 442 1 372 1.38e-64 214
Msa0351680 AT1G33720.2 37.391 345 179 8 126 442 1 336 3.61e-64 212
Msa0351680 AT3G20120.4 33.245 376 242 6 48 422 58 425 7.00e-64 214
Msa0351680 AT2G27000.1 32.824 393 251 8 43 431 50 433 1.08e-63 214
Msa0351680 AT3G25180.2 33.588 393 249 6 1 388 10 395 7.99e-63 209
Msa0351680 AT5G05260.1 30.303 429 251 9 27 442 35 428 1.34e-61 208
Msa0351680 AT3G61880.1 34.426 427 257 11 23 442 57 467 1.58e-61 209
Msa0351680 AT1G74110.1 31.651 436 274 12 22 442 51 477 2.30e-61 208
Msa0351680 AT3G61880.2 34.660 427 256 12 23 442 57 467 3.17e-61 208
Msa0351680 AT3G20960.1 34.957 349 219 5 95 442 2 343 4.29e-61 204
Msa0351680 AT1G28430.1 31.903 373 241 6 53 422 62 424 1.24e-60 206
Msa0351680 AT3G20080.2 31.218 394 260 8 32 422 42 427 2.16e-60 205
Msa0351680 AT3G20080.1 31.218 394 260 8 32 422 42 427 2.16e-60 205
Msa0351680 AT1G58260.1 29.425 435 291 7 2 424 8 438 1.87e-59 203
Msa0351680 AT1G79370.1 30.568 458 278 11 2 426 7 457 7.44e-59 202
Msa0351680 AT2G45580.2 42.623 244 125 5 206 442 55 290 1.16e-58 196
Msa0351680 AT1G13710.1 31.897 464 261 17 5 442 18 452 2.95e-58 199
Msa0351680 AT1G66540.2 38.911 257 147 4 171 426 1 248 1.46e-57 192
Msa0351680 AT4G15330.2 32.045 440 255 11 6 442 15 413 3.96e-57 196
Msa0351680 AT1G16410.1 31.136 440 276 11 3 424 17 447 6.43e-57 196
Msa0351680 AT4G15380.1 29.863 365 243 5 59 422 70 422 1.19e-56 195
Msa0351680 AT2G30490.1 33.185 449 267 11 8 442 11 440 1.56e-56 195
Msa0351680 AT5G24960.2 33.333 378 241 5 25 400 26 394 3.07e-56 191
Msa0351680 AT3G20090.1 34.700 317 199 5 127 442 1 310 1.38e-54 186
Msa0351680 AT1G13080.2 33.739 329 193 9 121 442 9 319 1.72e-54 186
Msa0351680 AT5G35917.1 29.412 425 257 10 19 422 29 431 9.51e-54 187
Msa0351680 AT5G04630.1 28.702 439 288 11 4 430 10 435 1.15e-53 187
Msa0351680 AT2G25160.2 32.426 404 254 10 7 397 11 408 1.24e-53 185
Msa0351680 AT3G20130.2 31.186 388 225 9 39 422 49 398 4.48e-53 185
Msa0351680 AT1G16400.1 30.664 437 280 10 4 424 17 446 1.03e-52 185
Msa0351680 AT5G36220.2 37.402 254 150 4 168 421 31 275 3.15e-50 174
Msa0351680 AT3G20120.2 34.007 297 187 6 127 422 1 289 4.09e-50 174
Msa0351680 AT3G20120.3 34.007 297 187 6 127 422 1 289 4.09e-50 174
Msa0351680 AT3G20120.1 34.007 297 187 6 127 422 1 289 4.09e-50 174
Msa0351680 AT2G27010.1 29.975 397 241 10 53 442 57 423 6.77e-50 177
Msa0351680 AT3G10560.1 29.724 434 272 11 13 430 23 439 9.52e-49 174
Msa0351680 AT1G64940.1 28.850 461 295 12 1 442 1 447 2.18e-48 173
Msa0351680 AT1G16410.2 29.484 407 260 11 3 391 17 414 4.51e-46 165
Msa0351680 AT3G20080.4 30.976 297 197 5 127 422 1 290 9.00e-45 160
Msa0351680 AT3G20080.5 30.976 297 197 5 127 422 1 290 9.00e-45 160
Msa0351680 AT3G20080.6 30.976 297 197 5 127 422 1 290 9.00e-45 160
Msa0351680 AT3G20080.3 30.976 297 197 5 127 422 1 290 9.00e-45 160
Msa0351680 AT3G26180.2 41.919 198 108 4 247 442 111 303 3.82e-44 158
Msa0351680 AT3G26180.2 39.316 117 65 2 1 115 1 113 2.32e-18 86.7
Msa0351680 AT3G53290.1 31.165 369 209 11 83 442 9 341 3.33e-42 154
Msa0351680 AT3G20935.1 34.892 278 154 7 187 442 1 273 1.45e-41 151
Msa0351680 AT5G04660.1 29.008 393 256 9 59 442 71 449 1.66e-41 154
Msa0351680 AT1G11600.1 25.517 435 305 6 19 442 22 448 2.67e-41 154
Msa0351680 AT5G25900.1 26.173 405 278 7 29 425 43 434 3.90e-41 153
Msa0351680 AT1G64930.1 27.945 433 283 10 27 442 27 447 1.36e-39 149
Msa0351680 AT1G64950.1 28.868 433 278 11 27 442 27 446 2.66e-39 148
Msa0351680 AT2G12190.1 28.406 433 282 11 27 442 27 448 2.67e-38 145
Msa0351680 AT1G13090.1 31.673 281 174 7 28 300 24 294 6.04e-38 140
Msa0351680 AT3G10570.1 26.923 390 264 8 49 430 63 439 2.00e-35 137
Msa0351680 AT2G45560.2 30.418 263 169 4 13 264 13 272 2.42e-35 133
Msa0351680 AT5G61320.1 28.571 462 274 15 1 442 1 426 2.15e-34 134
Msa0351680 AT2G45560.3 32.189 233 144 4 13 236 13 240 1.74e-33 126
Msa0351680 AT3G03470.1 27.489 462 295 13 2 442 5 447 1.02e-32 130
Msa0351680 AT1G64900.1 25.837 418 281 11 40 442 39 442 1.23e-24 106
Msa0351680 AT2G45510.1 26.829 328 212 9 116 425 118 435 1.28e-24 106
Msa0351680 AT2G44890.2 24.427 393 234 12 77 437 81 442 1.36e-23 103
Msa0351680 AT1G63710.1 24.473 474 291 18 7 442 4 448 7.84e-23 101
Msa0351680 AT2G44890.1 24.219 384 227 11 77 425 81 435 1.54e-22 100
Msa0351680 AT4G20235.1 26.724 232 135 5 33 259 32 233 8.04e-22 96.3
Msa0351680 AT5G58860.1 24.270 445 265 13 35 437 32 446 1.81e-21 97.4
Msa0351680 AT1G01600.1 24.242 429 263 15 35 422 29 436 1.54e-20 94.7
Msa0351680 AT1G19630.3 31.746 189 113 5 253 437 237 413 1.94e-19 90.9
Msa0351680 AT1G19630.2 32.948 173 107 4 253 421 237 404 2.11e-19 90.5
Msa0351680 AT1G19630.1 31.746 189 113 5 253 437 237 413 2.64e-19 90.5
Msa0351680 AT4G15110.1 27.979 193 129 3 239 422 290 481 2.71e-19 90.9
Msa0351680 AT4G00360.1 23.272 434 267 16 35 426 29 438 4.56e-19 90.1
Msa0351680 AT2G26170.1 22.199 473 301 14 3 442 22 460 9.65e-19 89.0
Msa0351680 AT1G24540.1 24.667 450 288 17 6 425 20 448 1.99e-18 88.2
Msa0351680 AT5G08250.1 24.186 430 254 18 39 425 4 404 3.72e-18 87.0
Msa0351680 AT5G08250.2 24.194 434 257 18 35 425 62 466 4.57e-18 87.0
Msa0351680 AT3G53130.1 23.267 404 255 11 63 442 108 480 1.23e-17 85.5
Msa0351680 AT1G31800.1 23.325 403 254 13 63 442 139 509 1.26e-17 85.9
Msa0351680 AT5G23190.1 24.299 428 259 18 39 425 65 468 1.88e-17 85.1
Msa0351680 AT3G53305.1 28.402 169 114 3 67 233 1 164 7.54e-17 82.0
Msa0351680 AT3G53305.1 43.137 102 49 2 341 442 175 267 1.68e-12 68.9
Msa0351680 AT3G26125.1 21.379 435 289 13 36 431 46 466 7.03e-16 80.1
Msa0351680 AT2G45970.1 22.603 438 263 15 35 426 29 436 1.13e-15 79.7
Msa0351680 AT1G69500.1 22.587 487 279 16 1 425 1 451 1.31e-15 79.3
Msa0351680 AT3G61035.1 27.206 272 168 10 41 301 51 303 4.03e-15 76.6
Msa0351680 AT2G26710.1 25.157 318 200 11 121 424 149 442 7.38e-15 77.0
Msa0351680 AT1G05160.2 24.775 444 280 15 3 424 10 421 1.38e-14 76.3
Msa0351680 AT1G05160.1 24.775 444 280 15 3 424 10 421 1.38e-14 76.3
Msa0351680 AT2G26170.2 27.586 203 140 4 241 442 181 377 1.78e-14 75.5
Msa0351680 AT1G65340.1 26.829 205 139 4 226 422 226 427 2.81e-14 75.1
Msa0351680 AT2G32440.2 33.152 184 110 5 243 421 241 416 3.22e-14 75.1
Msa0351680 AT2G32440.1 33.152 184 110 5 243 421 241 416 3.22e-14 75.1
Msa0351680 AT1G73340.1 21.615 421 289 10 9 422 18 404 4.46e-14 74.3
Msa0351680 AT5G52400.1 31.250 192 120 7 241 427 268 452 5.29e-14 74.3
Msa0351680 AT1G47620.1 26.180 233 139 9 231 441 239 460 1.04e-13 73.6
Msa0351680 AT1G57750.2 22.414 464 292 18 4 436 6 432 1.18e-13 73.2
Msa0351680 AT3G14620.1 22.959 392 273 12 56 442 89 456 1.53e-13 72.8
Msa0351680 AT5G35920.1 42.169 83 46 2 360 442 6 86 1.57e-13 68.6
Msa0351680 AT4G39500.2 22.538 457 289 19 2 422 13 440 1.99e-13 72.4
Msa0351680 AT1G57750.1 22.222 450 284 17 4 422 6 420 4.31e-13 71.6
Msa0351680 AT3G14610.1 24.631 203 147 3 241 442 256 453 4.78e-13 71.2
Msa0351680 AT3G14650.1 22.997 387 272 12 46 428 79 443 5.09e-13 71.2
Msa0351680 AT3G14660.1 22.030 404 279 13 46 442 79 453 2.01e-12 69.3
Msa0351680 AT3G14630.1 29.189 185 128 3 241 424 253 435 3.85e-12 68.6
Msa0351680 AT4G27710.1 25.909 220 158 4 212 430 235 450 4.98e-12 68.2
Msa0351680 AT3G14630.2 29.189 185 128 3 241 424 308 490 5.44e-12 68.2
Msa0351680 AT1G13150.1 21.101 436 295 17 23 425 26 445 2.00e-11 66.2
Msa0351680 AT3G14640.1 23.567 314 221 11 121 428 145 445 2.98e-11 65.9
Msa0351680 AT3G14640.2 23.567 314 221 11 121 428 167 467 3.26e-11 65.9
Msa0351680 AT4G39500.1 23.333 360 224 14 93 422 53 390 4.99e-11 65.1
Msa0351680 AT2G21910.1 25.728 206 131 7 232 422 231 429 6.67e-11 64.7
Msa0351680 AT5G38450.1 25.949 316 198 9 121 421 149 443 8.58e-11 64.3
Msa0351680 AT3G14690.2 21.865 311 228 8 121 428 180 478 9.12e-11 64.3

Find 103 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTTGTCCAATTCTTCT+TGG 0.173667 3_1:-18884506 None:intergenic
CCACCTGGTAAGAACCTTTC+AGG 0.174032 3_1:-18884762 None:intergenic
CCTTTGATGCACCTCAAATT+AGG 0.218681 3_1:+18880993 Msa0351680:CDS
CGTTGCGGAACAATTCTTAA+AGG 0.223593 3_1:+18881049 Msa0351680:CDS
GATCTTGTGTTTGCACCTTA+TGG 0.228924 3_1:+18881140 Msa0351680:CDS
CCTTGAACTCATCAGCTTTA+GGG 0.239092 3_1:-18883099 None:intergenic
TCCTTGAACTCATCAGCTTT+AGG 0.254542 3_1:-18883100 None:intergenic
CCTATTATAGGCCATGGTTT+TGG 0.267302 3_1:-18880906 None:intergenic
AATGGATCAACCCATTCTTT+TGG 0.269329 3_1:-18884729 None:intergenic
TCCAAAGGGTTCAACTCTTT+TGG 0.277920 3_1:+18884680 Msa0351680:CDS
TGGACTTTAGCTAGAATTCT+TGG 0.279526 3_1:-18884486 None:intergenic
CTTTCAGGTTTGAACTCTAA+TGG 0.282342 3_1:-18884747 None:intergenic
AATAATTAACCATGTCTATA+TGG 0.299416 3_1:+18880790 None:intergenic
TGAAATCAAAGCACTACTTT+TGG 0.311979 3_1:+18883378 Msa0351680:CDS
CCAAAACCATGGCCTATAAT+AGG 0.314382 3_1:+18880906 Msa0351680:CDS
AGCTAAAGTCCAAGAAGAAT+TGG 0.333413 3_1:+18884497 Msa0351680:CDS
GGATGTTATTGTGGCGGCTT+CGG 0.339513 3_1:+18881022 Msa0351680:CDS
GATGTTATTGTGGCGGCTTC+GGG 0.360693 3_1:+18881023 Msa0351680:CDS
GAATTCTTCCATGACTTTGT+TGG 0.364575 3_1:-18881210 None:intergenic
CCCTAAAGCTGATGAGTTCA+AGG 0.366865 3_1:+18883099 Msa0351680:CDS
TACTTTGTTGTTACTTAAAG+AGG 0.378838 3_1:+18883321 Msa0351680:CDS
GGACTTTAGCTAGAATTCTT+GGG 0.386992 3_1:-18884485 None:intergenic
ACCAAAAGAGTTGAACCCTT+TGG 0.387048 3_1:-18884681 None:intergenic
TGTGGCATGTTACCTATTAT+AGG 0.390782 3_1:-18880918 None:intergenic
GCACTTGCTAGGGTTATGTT+AGG 0.398352 3_1:+18883040 Msa0351680:CDS
AGCTGATGAGTTCAAGGAAA+TGG 0.412037 3_1:+18883105 Msa0351680:CDS
ATATATTTAGCTCCGGTGTT+GGG 0.415033 3_1:-18881101 None:intergenic
ACAAAGTTGTCGGCAGTGAT+AGG 0.423959 3_1:+18884520 Msa0351680:CDS
TTTATCACTGCTTGTAGGTA+AGG 0.426802 3_1:-18884573 None:intergenic
CGCTCGTGACCCAAAAGAAT+GGG 0.426992 3_1:+18884719 Msa0351680:CDS
GCAATAGACTGGTGTGGGGC+AGG 0.427946 3_1:-18880948 None:intergenic
ATTTCATAAAACGGTATATG+AGG 0.433726 3_1:-18880845 None:intergenic
AACCCTAGCAAGTGCATTTG+TGG 0.437806 3_1:-18883032 None:intergenic
CTTGAATTGATGGTGTTAGC+TGG 0.438311 3_1:+18883130 Msa0351680:CDS
GAATAGAACATGTTTGCAGC+TGG 0.442078 3_1:+18884408 Msa0351680:intron
CAAGTGTGATGTTGATGTTA+AGG 0.444602 3_1:+18884788 Msa0351680:CDS
TTGGAATGGCTAGACCTTCA+AGG 0.447928 3_1:+18883184 Msa0351680:CDS
TAGCTCCGGTGTTGGGTGGC+CGG 0.453513 3_1:-18881094 None:intergenic
TTGTTGCAAATTTCATAAAA+CGG 0.456264 3_1:-18880854 None:intergenic
CCTAATTTGAGGTGCATCAA+AGG 0.458783 3_1:-18880993 None:intergenic
ATTCGCCACCGCGGACCATA+AGG 0.461265 3_1:-18881155 None:intergenic
GGAAATGGTTCTTGAATTGA+TGG 0.461761 3_1:+18883120 Msa0351680:CDS
GCTTGTAGGTAAGGTAGGTT+AGG 0.469003 3_1:-18884564 None:intergenic
GTACCACAAATGCACTTGCT+AGG 0.471149 3_1:+18883029 Msa0351680:CDS
TTGCCAAGGCTGCAATAGAC+TGG 0.474584 3_1:-18880959 None:intergenic
AAAGAGGAAACAGATGTTGA+TGG 0.477782 3_1:+18883337 Msa0351680:CDS
AGGCTGCAATAGACTGGTGT+GGG 0.478207 3_1:-18880953 None:intergenic
ACACCAGTCTATTGCAGCCT+TGG 0.479272 3_1:+18880956 Msa0351680:CDS
ATGTTACCTATTATAGGCCA+TGG 0.479446 3_1:-18880912 None:intergenic
AGACACAAAAGCTGTAAACT+TGG 0.484703 3_1:+18882988 Msa0351680:CDS
TCGCTCGTGACCCAAAAGAA+TGG 0.492284 3_1:+18884718 Msa0351680:CDS
AGAATTCAAACACTTGCGTC+AGG 0.492299 3_1:+18881226 Msa0351680:CDS
TATATATTTAGCTCCGGTGT+TGG 0.492627 3_1:-18881102 None:intergenic
AAGTGTGATGTTGATGTTAA+GGG 0.500436 3_1:+18884789 Msa0351680:CDS
AATAGGTAACATGCCACACT+TGG 0.503007 3_1:+18880923 Msa0351680:CDS
GGCGGCTTCGGGCTCCGTTG+CGG 0.505997 3_1:+18881034 Msa0351680:CDS
TCATCACTACCACTTCCACC+TGG 0.506524 3_1:+18880882 Msa0351680:CDS
GGGAGGGAAAGAGGTGTTGA+TGG 0.508005 3_1:-18884615 None:intergenic
ATAAGCTATATATTTAGCTC+CGG 0.512196 3_1:-18881108 None:intergenic
TCACTGCTTGTAGGTAAGGT+AGG 0.514800 3_1:-18884569 None:intergenic
GCAATTCGCGGGAGGGAAAG+AGG 0.517018 3_1:-18884624 None:intergenic
CATCCACAAAACCTAATTTG+AGG 0.517180 3_1:-18881004 None:intergenic
AGGTCTAGCCATTCCAATGA+AGG 0.518783 3_1:-18883178 None:intergenic
AATAGAACATGTTTGCAGCT+GGG 0.519521 3_1:+18884409 Msa0351680:intron
ATCATCAAGCACCACAGAAT+GGG 0.521031 3_1:+18884440 Msa0351680:CDS
TACCACAAATGCACTTGCTA+GGG 0.524611 3_1:+18883030 Msa0351680:CDS
CATCATCAAGCACCACAGAA+TGG 0.531457 3_1:+18884439 Msa0351680:CDS
GAAGAATTGGACAAAGTTGT+CGG 0.533284 3_1:+18884510 Msa0351680:CDS
CTAATTTGAGGTGCATCAAA+GGG 0.538723 3_1:-18880992 None:intergenic
GGAAGAAGAGTATTCAATGA+TGG 0.539768 3_1:+18883061 Msa0351680:CDS
ATGATGCTAACTTTAGTAGC+CGG 0.544368 3_1:+18881075 Msa0351680:CDS
AACTTTCAGATGCAATTCGC+GGG 0.548887 3_1:-18884635 None:intergenic
CAACTTTCAGATGCAATTCG+CGG 0.550510 3_1:-18884636 None:intergenic
TTTGGGTACCACATTCCAAA+GGG 0.554084 3_1:+18884666 Msa0351680:CDS
TTCAGATGCAATTCGCGGGA+GGG 0.555926 3_1:-18884631 None:intergenic
ACATCACACTTGTCACCACC+TGG 0.556340 3_1:-18884777 None:intergenic
GTTTCGAATTAATTCTGCAA+TGG 0.558059 3_1:-18884463 None:intergenic
AGCAAGATTAACAAGCAACT+TGG 0.558621 3_1:+18882952 Msa0351680:CDS
TTCCACCTGGGCCAAAACCA+TGG 0.560895 3_1:+18880895 Msa0351680:CDS
TTCTGCAATGGCCCATTCTG+TGG 0.566999 3_1:-18884451 None:intergenic
TATTTAGCTCCGGTGTTGGG+TGG 0.567709 3_1:-18881098 None:intergenic
CTTTAAGAATTGTTCCGCAA+CGG 0.568293 3_1:-18881048 None:intergenic
TGTGGGGCAGGACCCAAGTG+TGG 0.568870 3_1:-18880936 None:intergenic
GACACAAAAGCTGTAAACTT+GGG 0.572453 3_1:+18882989 Msa0351680:CDS
GAGTTGAACCCTTTGGAATG+TGG 0.584940 3_1:-18884674 None:intergenic
CATTAGAGTTCAAACCTGAA+AGG 0.587345 3_1:+18884748 Msa0351680:CDS
TTTCAGATGCAATTCGCGGG+AGG 0.597903 3_1:-18884632 None:intergenic
AAGGCTGCAATAGACTGGTG+TGG 0.599134 3_1:-18880954 None:intergenic
AAACCTGAAAGGTTCTTACC+AGG 0.601200 3_1:+18884759 Msa0351680:CDS
AGAGTATTCAATGATGGCAA+TGG 0.602023 3_1:+18883067 Msa0351680:CDS
AGTAGCCGGCCACCCAACAC+CGG 0.608428 3_1:+18881089 Msa0351680:CDS
TTTGTTGGAAAAGAGATGAA+CGG 0.623691 3_1:-18881195 None:intergenic
CATCACTACCACTTCCACCT+GGG 0.626313 3_1:+18880883 Msa0351680:CDS
TGCAATGAACCATATAGACA+TGG 0.662072 3_1:-18880799 None:intergenic
ATAGGTAACATGCCACACTT+GGG 0.664970 3_1:+18880924 Msa0351680:CDS
GTTGGAAAAGAGATGAACGG+AGG 0.671525 3_1:-18881192 None:intergenic
GTATTCAATGATGGCAATGG+TGG 0.675568 3_1:+18883070 Msa0351680:CDS
TTGCACCTTATGGTCCGCGG+TGG 0.682378 3_1:+18881150 Msa0351680:CDS
GGCTGCAATAGACTGGTGTG+GGG 0.700776 3_1:-18880952 None:intergenic
CCTGAAAGGTTCTTACCAGG+TGG 0.709367 3_1:+18884762 Msa0351680:CDS
TGTTTGCACCTTATGGTCCG+CGG 0.711428 3_1:+18881147 Msa0351680:CDS
GAGGTGTTGATGGATGCAAG+CGG 0.746664 3_1:-18884605 None:intergenic
TTTCTGAGCATTCGCCACCG+CGG 0.752450 3_1:-18881164 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr3_1:18883624-18883643 Msa0351680:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr3_1:18883623-18883642 Msa0351680:intron 0.0%
!! TATATATATATATATATATA+TGG - chr3_1:18883624-18883643 None:intergenic 0.0%
!! ATAACAAAATAAATATTTGA+AGG + chr3_1:18881983-18882002 Msa0351680:intron 10.0%
!! TAACAAAATAAATATTTGAA+GGG + chr3_1:18881984-18882003 Msa0351680:intron 10.0%
!! TTAGTTAATATATATTCTTT+AGG + chr3_1:18882130-18882149 Msa0351680:intron 10.0%
!! TAGTTAATATATATTCTTTA+GGG + chr3_1:18882131-18882150 Msa0351680:intron 10.0%
!! TATATATATATATTAGTTAG+TGG - chr3_1:18883616-18883635 None:intergenic 10.0%
!! ATATATATATATATATAAGC+CGG + chr3_1:18883937-18883956 Msa0351680:intron 10.0%
!!! TTTACTTAATTATAATTTTC+CGG - chr3_1:18883959-18883978 None:intergenic 10.0%
!!! CAAAGAACAATTTAATTTAA+AGG + chr3_1:18881778-18881797 Msa0351680:intron 15.0%
!! AACAAAATAAATATTTGAAG+GGG + chr3_1:18881985-18882004 Msa0351680:intron 15.0%
!!! AAGAAAAAATCTTTTATAAG+TGG + chr3_1:18882340-18882359 Msa0351680:intron 15.0%
!!! AGAAAAAATCTTTTATAAGT+GGG + chr3_1:18882341-18882360 Msa0351680:intron 15.0%
!! AAAATATTCCATTAATTCAT+CGG - chr3_1:18882518-18882537 None:intergenic 15.0%
!! AATTGTAAATTAAACTACTT+AGG + chr3_1:18882570-18882589 Msa0351680:intron 15.0%
!! TAAATCGTATTAAAAATAAC+CGG - chr3_1:18882873-18882892 None:intergenic 15.0%
!! ATTGAAAATCCATTAAAAAA+AGG - chr3_1:18883510-18883529 None:intergenic 15.0%
!! CTATTTCATATTAAATGTTT+CGG + chr3_1:18884083-18884102 Msa0351680:intron 15.0%
!! TTGTTGCAAATTTCATAAAA+CGG - chr3_1:18880857-18880876 None:intergenic 20.0%
!!! TCAAATGAGAATTAATTTTC+CGG - chr3_1:18881334-18881353 None:intergenic 20.0%
!! CAATAGTTTAAATTGAAGAA+CGG - chr3_1:18881482-18881501 None:intergenic 20.0%
!! TTTAATATGAACAAATTCCT+TGG - chr3_1:18881684-18881703 None:intergenic 20.0%
!! GAAAAAAATTATCAAAGTGT+GGG - chr3_1:18881866-18881885 None:intergenic 20.0%
!! AGAAAAAAATTATCAAAGTG+TGG - chr3_1:18881867-18881886 None:intergenic 20.0%
!! TTAATGAATTCTACTAATCA+AGG - chr3_1:18881893-18881912 None:intergenic 20.0%
!! AACCAACAAAAATAAAAAGA+AGG + chr3_1:18882180-18882199 Msa0351680:intron 20.0%
!!! ATCCTTCTTTTTATTTTTGT+TGG - chr3_1:18882185-18882204 None:intergenic 20.0%
!!! TATCACTTGATGATTTTTAT+TGG - chr3_1:18882283-18882302 None:intergenic 20.0%
!! AATAAAAATCATCAAGTGAT+AGG + chr3_1:18882282-18882301 Msa0351680:intron 20.0%
!! AAGATAAAACCATAAGAAAA+TGG + chr3_1:18882473-18882492 Msa0351680:intron 20.0%
!! AGATAAAACCATAAGAAAAT+GGG + chr3_1:18882474-18882493 Msa0351680:intron 20.0%
!! AAATATTCCATTAATTCATC+GGG - chr3_1:18882517-18882536 None:intergenic 20.0%
!! CTAACTATAACTAATACTTA+AGG - chr3_1:18882622-18882641 None:intergenic 20.0%
!! AAATCGTATTAAAAATAACC+GGG - chr3_1:18882872-18882891 None:intergenic 20.0%
!! AAATCCATTAAAAAAAGGTA+AGG - chr3_1:18883505-18883524 None:intergenic 20.0%
!!! TTTACTTTTCTCTAAAACAT+AGG - chr3_1:18884221-18884240 None:intergenic 20.0%
! ATTTCATAAAACGGTATATG+AGG - chr3_1:18880848-18880867 None:intergenic 25.0%
!! ATAAGCTATATATTTAGCTC+CGG - chr3_1:18881111-18881130 None:intergenic 25.0%
! TGAATAGAAGAATGAGAAAT+AGG + chr3_1:18881623-18881642 Msa0351680:intron 25.0%
! GAATAGAAGAATGAGAAATA+GGG + chr3_1:18881624-18881643 Msa0351680:intron 25.0%
!!! GTGTATTACAATTTTTTGAG+AGG + chr3_1:18881710-18881729 Msa0351680:intron 25.0%
! TTAATGATAACTTAGTTCGA+AGG + chr3_1:18881810-18881829 Msa0351680:intron 25.0%
!! AACCACTTTATTTGACATAT+AGG + chr3_1:18881924-18881943 Msa0351680:intron 25.0%
! TACCTATATGTCAAATAAAG+TGG - chr3_1:18881929-18881948 None:intergenic 25.0%
!!! ATTTTGTTATCTAGCTAACT+TGG - chr3_1:18881973-18881992 None:intergenic 25.0%
! AGAAAGATTCAAGAATGATA+TGG - chr3_1:18882218-18882237 None:intergenic 25.0%
!! TGAACTTTTCTTGGATAAAA+AGG + chr3_1:18882400-18882419 Msa0351680:intron 25.0%
!! AAAGGTTAAAAGACTTTTCT+TGG + chr3_1:18882418-18882437 Msa0351680:intron 25.0%
!!! ACATAGTTTTTTATTCATCC+CGG + chr3_1:18882851-18882870 Msa0351680:intron 25.0%
!! AAGTGATTTTATTCCTTCAT+TGG + chr3_1:18883165-18883184 Msa0351680:CDS 25.0%
!! ATTTTATTCCTTCATTGGAA+TGG + chr3_1:18883170-18883189 Msa0351680:CDS 25.0%
!!! TTTTAAGAGTGAGAAACATA+AGG + chr3_1:18883288-18883307 Msa0351680:CDS 25.0%
!!! TACTTTGTTGTTACTTAAAG+AGG + chr3_1:18883321-18883340 Msa0351680:CDS 25.0%
! TCTTTATGAGTTTGAGAAAA+GGG - chr3_1:18883449-18883468 None:intergenic 25.0%
! ATCTTTATGAGTTTGAGAAA+AGG - chr3_1:18883450-18883469 None:intergenic 25.0%
! TTTCTCAAACTCATAAAGAT+TGG + chr3_1:18883450-18883469 Msa0351680:intron 25.0%
!!! CAATCCTTACCTTTTTTTAA+TGG + chr3_1:18883498-18883517 Msa0351680:intron 25.0%
! CAAAAAACAAGATAGCAAAA+TGG + chr3_1:18883567-18883586 Msa0351680:intron 25.0%
!!! AAAATGTATTTGTTGTAACG+TGG - chr3_1:18884256-18884275 None:intergenic 25.0%
! TCAGTTTACAAACTTAAGTT+TGG - chr3_1:18884286-18884305 None:intergenic 25.0%
! ATACCTTGACATAATGATAT+TGG + chr3_1:18884345-18884364 Msa0351680:intron 25.0%
!!! AACTCTTTTGGTTAATGTAT+GGG + chr3_1:18884692-18884711 Msa0351680:CDS 25.0%
TTTGTTGGAAAAGAGATGAA+CGG - chr3_1:18881198-18881217 None:intergenic 30.0%
TGACATATAGGTATAATTGC+CGG + chr3_1:18881936-18881955 Msa0351680:intron 30.0%
TATCTAGCTAACTTGGTTTA+CGG - chr3_1:18881966-18881985 None:intergenic 30.0%
AAAAATCATCAAGTGATAGG+AGG + chr3_1:18882285-18882304 Msa0351680:intron 30.0%
AAAATCATCAAGTGATAGGA+GGG + chr3_1:18882286-18882305 Msa0351680:intron 30.0%
!! TTCTCTTTGAGACTTTCTAT+TGG - chr3_1:18882322-18882341 None:intergenic 30.0%
! CTCTTTGAAAGACTTTCAAA+TGG - chr3_1:18882453-18882472 None:intergenic 30.0%
AAATATTGATACACATGCTC+TGG + chr3_1:18882648-18882667 Msa0351680:intron 30.0%
AAAATGAACTCGAGTTAACT+AGG + chr3_1:18882727-18882746 Msa0351680:intron 30.0%
! CCTGAAAAGTGTAATTGATT+AGG - chr3_1:18882925-18882944 None:intergenic 30.0%
! CCTAATCAATTACACTTTTC+AGG + chr3_1:18882922-18882941 Msa0351680:intron 30.0%
! TTTTAGATTGAACTCCTTGA+AGG - chr3_1:18883201-18883220 None:intergenic 30.0%
!! TGAAATCAAAGCACTACTTT+TGG + chr3_1:18883378-18883397 Msa0351680:CDS 30.0%
!!! TTGCTATCTTGTTTTTTGAG+AGG - chr3_1:18883565-18883584 None:intergenic 30.0%
! ATAGAAGACACATTTTGTGA+AGG + chr3_1:18883721-18883740 Msa0351680:intron 30.0%
!! ACACCAACTTACTTTTATGA+AGG + chr3_1:18883783-18883802 Msa0351680:intron 30.0%
ACACCTTCATAAAAGTAAGT+TGG - chr3_1:18883789-18883808 None:intergenic 30.0%
AAAGTGAAAATCACACCTTA+AGG + chr3_1:18883831-18883850 Msa0351680:intron 30.0%
TTGCCAATATCATTATGTCA+AGG - chr3_1:18884351-18884370 None:intergenic 30.0%
GTTTCGAATTAATTCTGCAA+TGG - chr3_1:18884466-18884485 None:intergenic 30.0%
! TTTCTTTTATCACTGCTTGT+AGG - chr3_1:18884581-18884600 None:intergenic 30.0%
! TCTGAAAGTTGTGAGATTTT+TGG + chr3_1:18884648-18884667 Msa0351680:CDS 30.0%
! CTGAAAGTTGTGAGATTTTT+GGG + chr3_1:18884649-18884668 Msa0351680:CDS 30.0%
!! CAACTCTTTTGGTTAATGTA+TGG + chr3_1:18884691-18884710 Msa0351680:CDS 30.0%
AAGTGTGATGTTGATGTTAA+GGG + chr3_1:18884789-18884808 Msa0351680:CDS 30.0%
ATGTTACCTATTATAGGCCA+TGG - chr3_1:18880915-18880934 None:intergenic 35.0%
TGTGGCATGTTACCTATTAT+AGG - chr3_1:18880921-18880940 None:intergenic 35.0%
! CTAATTTGAGGTGCATCAAA+GGG - chr3_1:18880995-18881014 None:intergenic 35.0%
CATCCACAAAACCTAATTTG+AGG - chr3_1:18881007-18881026 None:intergenic 35.0%
!! AGGTTTTGTGGATGTTATTG+TGG + chr3_1:18881013-18881032 Msa0351680:CDS 35.0%
! TTTTGTGGATGTTATTGTGG+CGG + chr3_1:18881016-18881035 Msa0351680:CDS 35.0%
! CTTTAAGAATTGTTCCGCAA+CGG - chr3_1:18881051-18881070 None:intergenic 35.0%
ATGATGCTAACTTTAGTAGC+CGG + chr3_1:18881075-18881094 Msa0351680:CDS 35.0%
! ATATATTTAGCTCCGGTGTT+GGG - chr3_1:18881104-18881123 None:intergenic 35.0%
! TATATATTTAGCTCCGGTGT+TGG - chr3_1:18881105-18881124 None:intergenic 35.0%
! TCTCTTTTCCAACAAAGTCA+TGG + chr3_1:18881202-18881221 Msa0351680:CDS 35.0%
GAATTCTTCCATGACTTTGT+TGG - chr3_1:18881213-18881232 None:intergenic 35.0%
GAGAGTCTAGATTATGTAAC+CGG + chr3_1:18881312-18881331 Msa0351680:intron 35.0%
GAAGGAGCTATATATCTTCA+AGG + chr3_1:18881433-18881452 Msa0351680:intron 35.0%
!!! TCAAAGTGTGGGATTTTTTC+AGG - chr3_1:18881855-18881874 None:intergenic 35.0%
GTAGAATTCATTAACGTGTG+AGG + chr3_1:18881899-18881918 Msa0351680:intron 35.0%
TAACTTGGTTTACGGTTTAC+CGG - chr3_1:18881958-18881977 None:intergenic 35.0%
!! ATCACATTAGCATTGATGAG+TGG - chr3_1:18882369-18882388 None:intergenic 35.0%
TCATCAATGCTAATGTGATC+AGG + chr3_1:18882370-18882389 Msa0351680:intron 35.0%
! CTATGCATCCCATTTTCTTA+TGG - chr3_1:18882485-18882504 None:intergenic 35.0%
!! CAATTACACTTTTCAGGAAG+AGG + chr3_1:18882928-18882947 Msa0351680:intron 35.0%
AGCAAGATTAACAAGCAACT+TGG + chr3_1:18882952-18882971 Msa0351680:CDS 35.0%
AGACACAAAAGCTGTAAACT+TGG + chr3_1:18882988-18883007 Msa0351680:CDS 35.0%
GACACAAAAGCTGTAAACTT+GGG + chr3_1:18882989-18883008 Msa0351680:CDS 35.0%
!! GGAAGAAGAGTATTCAATGA+TGG + chr3_1:18883061-18883080 Msa0351680:CDS 35.0%
! AGAGTATTCAATGATGGCAA+TGG + chr3_1:18883067-18883086 Msa0351680:CDS 35.0%
GGAAATGGTTCTTGAATTGA+TGG + chr3_1:18883120-18883139 Msa0351680:CDS 35.0%
AAAGAGGAAACAGATGTTGA+TGG + chr3_1:18883337-18883356 Msa0351680:CDS 35.0%
ATGTGGAGTTATAGAAGAGT+AGG - chr3_1:18883411-18883430 None:intergenic 35.0%
!!! TCTTGTTTTTTGAGAGGTTC+AGG - chr3_1:18883559-18883578 None:intergenic 35.0%
! TTTTATCAAGCAACGCCTTA+AGG - chr3_1:18883849-18883868 None:intergenic 35.0%
TTGATAAAAGACACCACCAA+AGG + chr3_1:18883860-18883879 Msa0351680:intron 35.0%
TGATAAAAGACACCACCAAA+GGG + chr3_1:18883861-18883880 Msa0351680:intron 35.0%
! TTTTGTTACAAGACACCCTT+TGG - chr3_1:18883879-18883898 None:intergenic 35.0%
AAACCTCTACAACTAACAAG+CGG - chr3_1:18884141-18884160 None:intergenic 35.0%
AATAGAACATGTTTGCAGCT+GGG + chr3_1:18884409-18884428 Msa0351680:intron 35.0%
GGACTTTAGCTAGAATTCTT+GGG - chr3_1:18884488-18884507 None:intergenic 35.0%
TGGACTTTAGCTAGAATTCT+TGG - chr3_1:18884489-18884508 None:intergenic 35.0%
AGCTAAAGTCCAAGAAGAAT+TGG + chr3_1:18884497-18884516 Msa0351680:CDS 35.0%
CAACTTTGTCCAATTCTTCT+TGG - chr3_1:18884509-18884528 None:intergenic 35.0%
GAAGAATTGGACAAAGTTGT+CGG + chr3_1:18884510-18884529 Msa0351680:CDS 35.0%
TTTATCACTGCTTGTAGGTA+AGG - chr3_1:18884576-18884595 None:intergenic 35.0%
! ATGGATCAACCCATTCTTTT+GGG - chr3_1:18884731-18884750 None:intergenic 35.0%
! AATGGATCAACCCATTCTTT+TGG - chr3_1:18884732-18884751 None:intergenic 35.0%
!! CTTTCAGGTTTGAACTCTAA+TGG - chr3_1:18884750-18884769 None:intergenic 35.0%
CATTAGAGTTCAAACCTGAA+AGG + chr3_1:18884748-18884767 Msa0351680:CDS 35.0%
CAAGTGTGATGTTGATGTTA+AGG + chr3_1:18884788-18884807 Msa0351680:CDS 35.0%
! CCTATTATAGGCCATGGTTT+TGG - chr3_1:18880909-18880928 None:intergenic 40.0%
CCAAAACCATGGCCTATAAT+AGG + chr3_1:18880906-18880925 Msa0351680:CDS 40.0%
AATAGGTAACATGCCACACT+TGG + chr3_1:18880923-18880942 Msa0351680:CDS 40.0%
ATAGGTAACATGCCACACTT+GGG + chr3_1:18880924-18880943 Msa0351680:CDS 40.0%
! CCTAATTTGAGGTGCATCAA+AGG - chr3_1:18880996-18881015 None:intergenic 40.0%
CCTTTGATGCACCTCAAATT+AGG + chr3_1:18880993-18881012 Msa0351680:CDS 40.0%
! GCACCTCAAATTAGGTTTTG+TGG + chr3_1:18881001-18881020 Msa0351680:CDS 40.0%
CGTTGCGGAACAATTCTTAA+AGG + chr3_1:18881049-18881068 Msa0351680:CDS 40.0%
GATCTTGTGTTTGCACCTTA+TGG + chr3_1:18881140-18881159 Msa0351680:CDS 40.0%
AGAATTCAAACACTTGCGTC+AGG + chr3_1:18881226-18881245 Msa0351680:CDS 40.0%
!!! ACTGCTGTTTTGCATCTTGA+AGG + chr3_1:18881415-18881434 Msa0351680:intron 40.0%
! AGAATGAGAAATAGGGTGCT+CGG + chr3_1:18881631-18881650 Msa0351680:intron 40.0%
TATACTGCACAGAATCTCCA+AGG + chr3_1:18881664-18881683 Msa0351680:intron 40.0%
! GGACAAAGCTGAACTTTTCT+TGG + chr3_1:18882391-18882410 Msa0351680:intron 40.0%
AAACTACTTAGGTGTGCATG+TGG + chr3_1:18882581-18882600 Msa0351680:intron 40.0%
! TACCACAAATGCACTTGCTA+GGG + chr3_1:18883030-18883049 Msa0351680:CDS 40.0%
GTATTCAATGATGGCAATGG+TGG + chr3_1:18883070-18883089 Msa0351680:CDS 40.0%
CCTTGAACTCATCAGCTTTA+GGG - chr3_1:18883102-18883121 None:intergenic 40.0%
TCCTTGAACTCATCAGCTTT+AGG - chr3_1:18883103-18883122 None:intergenic 40.0%
AGCTGATGAGTTCAAGGAAA+TGG + chr3_1:18883105-18883124 Msa0351680:CDS 40.0%
!! CTTGAATTGATGGTGTTAGC+TGG + chr3_1:18883130-18883149 Msa0351680:CDS 40.0%
! GGTGTCAATGTTAGAGTGTT+AGG - chr3_1:18883538-18883557 None:intergenic 40.0%
AACCTCTACAACTAACAAGC+GGG - chr3_1:18884140-18884159 None:intergenic 40.0%
GAATAGAACATGTTTGCAGC+TGG + chr3_1:18884408-18884427 Msa0351680:intron 40.0%
ATCATCAAGCACCACAGAAT+GGG + chr3_1:18884440-18884459 Msa0351680:CDS 40.0%
AACTTTCAGATGCAATTCGC+GGG - chr3_1:18884638-18884657 None:intergenic 40.0%
CAACTTTCAGATGCAATTCG+CGG - chr3_1:18884639-18884658 None:intergenic 40.0%
!! TTTTGGGTACCACATTCCAA+AGG + chr3_1:18884665-18884684 Msa0351680:CDS 40.0%
TTTGGGTACCACATTCCAAA+GGG + chr3_1:18884666-18884685 Msa0351680:CDS 40.0%
! TCCAAAGGGTTCAACTCTTT+TGG + chr3_1:18884680-18884699 Msa0351680:CDS 40.0%
ACCAAAAGAGTTGAACCCTT+TGG - chr3_1:18884684-18884703 None:intergenic 40.0%
AAACCTGAAAGGTTCTTACC+AGG + chr3_1:18884759-18884778 Msa0351680:CDS 40.0%
GCAGCCTTGGCAAAAATTCA+TGG + chr3_1:18880969-18880988 Msa0351680:CDS 45.0%
! AGGGCCATGAATTTTTGCCA+AGG - chr3_1:18880976-18880995 None:intergenic 45.0%
GTTGGAAAAGAGATGAACGG+AGG - chr3_1:18881195-18881214 None:intergenic 45.0%
GCGTCAACCCGATGAATTAA+TGG + chr3_1:18882507-18882526 Msa0351680:intron 45.0%
CGTCGTGTAGAATATTCCTG+TGG - chr3_1:18882675-18882694 None:intergenic 45.0%
GTACCACAAATGCACTTGCT+AGG + chr3_1:18883029-18883048 Msa0351680:CDS 45.0%
AACCCTAGCAAGTGCATTTG+TGG - chr3_1:18883035-18883054 None:intergenic 45.0%
! GCACTTGCTAGGGTTATGTT+AGG + chr3_1:18883040-18883059 Msa0351680:CDS 45.0%
CCCTAAAGCTGATGAGTTCA+AGG + chr3_1:18883099-18883118 Msa0351680:CDS 45.0%
AGGTCTAGCCATTCCAATGA+AGG - chr3_1:18883181-18883200 None:intergenic 45.0%
TTGGAATGGCTAGACCTTCA+AGG + chr3_1:18883184-18883203 Msa0351680:CDS 45.0%
TGTTACAAGACACCCTTTGG+TGG - chr3_1:18883876-18883895 None:intergenic 45.0%
! TTCCCGCTTGTTAGTTGTAG+AGG + chr3_1:18884135-18884154 Msa0351680:intron 45.0%
CATCATCAAGCACCACAGAA+TGG + chr3_1:18884439-18884458 Msa0351680:CDS 45.0%
ACAAAGTTGTCGGCAGTGAT+AGG + chr3_1:18884520-18884539 Msa0351680:CDS 45.0%
GCTTGTAGGTAAGGTAGGTT+AGG - chr3_1:18884567-18884586 None:intergenic 45.0%
TCACTGCTTGTAGGTAAGGT+AGG - chr3_1:18884572-18884591 None:intergenic 45.0%
!! GAGTTGAACCCTTTGGAATG+TGG - chr3_1:18884677-18884696 None:intergenic 45.0%
TCATCACTACCACTTCCACC+TGG + chr3_1:18880882-18880901 Msa0351680:CDS 50.0%
CATCACTACCACTTCCACCT+GGG + chr3_1:18880883-18880902 Msa0351680:CDS 50.0%
AGGCTGCAATAGACTGGTGT+GGG - chr3_1:18880956-18880975 None:intergenic 50.0%
AAGGCTGCAATAGACTGGTG+TGG - chr3_1:18880957-18880976 None:intergenic 50.0%
ACACCAGTCTATTGCAGCCT+TGG + chr3_1:18880956-18880975 Msa0351680:CDS 50.0%
TTGCCAAGGCTGCAATAGAC+TGG - chr3_1:18880962-18880981 None:intergenic 50.0%
GGATGTTATTGTGGCGGCTT+CGG + chr3_1:18881022-18881041 Msa0351680:CDS 50.0%
GATGTTATTGTGGCGGCTTC+GGG + chr3_1:18881023-18881042 Msa0351680:CDS 50.0%
! TATTTAGCTCCGGTGTTGGG+TGG - chr3_1:18881101-18881120 None:intergenic 50.0%
TGTTTGCACCTTATGGTCCG+CGG + chr3_1:18881147-18881166 Msa0351680:CDS 50.0%
! ATACACATGCTCTGGACCAC+AGG + chr3_1:18882656-18882675 Msa0351680:intron 50.0%
TTCTGCAATGGCCCATTCTG+TGG - chr3_1:18884454-18884473 None:intergenic 50.0%
!! GAGGTGTTGATGGATGCAAG+CGG - chr3_1:18884608-18884627 None:intergenic 50.0%
TTCAGATGCAATTCGCGGGA+GGG - chr3_1:18884634-18884653 None:intergenic 50.0%
TTTCAGATGCAATTCGCGGG+AGG - chr3_1:18884635-18884654 None:intergenic 50.0%
!! TTCTTTTGGGTCACGAGCGA+TGG - chr3_1:18884718-18884737 None:intergenic 50.0%
TCGCTCGTGACCCAAAAGAA+TGG + chr3_1:18884718-18884737 Msa0351680:CDS 50.0%
CGCTCGTGACCCAAAAGAAT+GGG + chr3_1:18884719-18884738 Msa0351680:CDS 50.0%
CCACCTGGTAAGAACCTTTC+AGG - chr3_1:18884765-18884784 None:intergenic 50.0%
CCTGAAAGGTTCTTACCAGG+TGG + chr3_1:18884762-18884781 Msa0351680:CDS 50.0%
ACATCACACTTGTCACCACC+TGG - chr3_1:18884780-18884799 None:intergenic 50.0%
TTCCACCTGGGCCAAAACCA+TGG + chr3_1:18880895-18880914 Msa0351680:CDS 55.0%
!!! ATAGGCCATGGTTTTGGCCC+AGG - chr3_1:18880903-18880922 None:intergenic 55.0%
GGCTGCAATAGACTGGTGTG+GGG - chr3_1:18880955-18880974 None:intergenic 55.0%
TTTCTGAGCATTCGCCACCG+CGG - chr3_1:18881167-18881186 None:intergenic 55.0%
!! GGGAGGGAAAGAGGTGTTGA+TGG - chr3_1:18884618-18884637 None:intergenic 55.0%
!! GGTTTTGGCCCAGGTGGAAG+TGG - chr3_1:18880894-18880913 None:intergenic 60.0%
GCAATAGACTGGTGTGGGGC+AGG - chr3_1:18880951-18880970 None:intergenic 60.0%
TTGCACCTTATGGTCCGCGG+TGG + chr3_1:18881150-18881169 Msa0351680:CDS 60.0%
ATTCGCCACCGCGGACCATA+AGG - chr3_1:18881158-18881177 None:intergenic 60.0%
GGCGAGTATGCACGTGCATG+TGG - chr3_1:18883428-18883447 None:intergenic 60.0%
GCAATTCGCGGGAGGGAAAG+AGG - chr3_1:18884627-18884646 None:intergenic 60.0%
!!! GGCCATGGTTTTGGCCCAGG+TGG - chr3_1:18880900-18880919 None:intergenic 65.0%
TGTGGGGCAGGACCCAAGTG+TGG - chr3_1:18880939-18880958 None:intergenic 65.0%
AGTAGCCGGCCACCCAACAC+CGG + chr3_1:18881089-18881108 Msa0351680:CDS 65.0%
! TAGCTCCGGTGTTGGGTGGC+CGG - chr3_1:18881097-18881116 None:intergenic 65.0%
GGCGGCTTCGGGCTCCGTTG+CGG + chr3_1:18881034-18881053 Msa0351680:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 18880801 18884836 18880801 ID=Msa0351680;Name=Msa0351680
chr3_1 mRNA 18880801 18884836 18880801 ID=Msa0351680-mRNA-1;Parent=Msa0351680;Name=Msa0351680-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.5|0|1|1|1|3|0|442
chr3_1 exon 18880801 18881247 18880801 ID=Msa0351680-mRNA-1:exon:4373;Parent=Msa0351680-mRNA-1
chr3_1 exon 18882944 18883399 18882944 ID=Msa0351680-mRNA-1:exon:4374;Parent=Msa0351680-mRNA-1
chr3_1 exon 18884414 18884836 18884414 ID=Msa0351680-mRNA-1:exon:4375;Parent=Msa0351680-mRNA-1
chr3_1 CDS 18880801 18881247 18880801 ID=Msa0351680-mRNA-1:cds;Parent=Msa0351680-mRNA-1
chr3_1 CDS 18882944 18883399 18882944 ID=Msa0351680-mRNA-1:cds;Parent=Msa0351680-mRNA-1
chr3_1 CDS 18884414 18884836 18884414 ID=Msa0351680-mRNA-1:cds;Parent=Msa0351680-mRNA-1
Gene Sequence

>Msa0351680

ATGTCTATATGGTTCATTGCACTAGCTAGTTTCACATTATGCATCCTCATATACCGTTTTATGAAATTTGCAACAAGATCTTCATCACTACCACTTCCACCTGGGCCAAAACCATGGCCTATAATAGGTAACATGCCACACTTGGGTCCTGCCCCACACCAGTCTATTGCAGCCTTGGCAAAAATTCATGGCCCTTTGATGCACCTCAAATTAGGTTTTGTGGATGTTATTGTGGCGGCTTCGGGCTCCGTTGCGGAACAATTCTTAAAGGTTCATGATGCTAACTTTAGTAGCCGGCCACCCAACACCGGAGCTAAATATATAGCTTATAACTATCAAGATCTTGTGTTTGCACCTTATGGTCCGCGGTGGCGAATGCTCAGAAAAATATCCTCCGTTCATCTCTTTTCCAACAAAGTCATGGAAGAATTCAAACACTTGCGTCAGGAAGAGGTAGCAAGATTAACAAGCAACTTGGCAAGTAATTATTCAGACACAAAAGCTGTAAACTTGGGACAACTATTGAACGTATGTACCACAAATGCACTTGCTAGGGTTATGTTAGGAAGAAGAGTATTCAATGATGGCAATGGTGGTTGTGACCCTAAAGCTGATGAGTTCAAGGAAATGGTTCTTGAATTGATGGTGTTAGCTGGAGTTTTCAATATAAGTGATTTTATTCCTTCATTGGAATGGCTAGACCTTCAAGGAGTTCAATCTAAAATGAAGAAATTACACAAGAAGTTTGATGCATTTTTAACAAACATTATTGATGAACGTGAAAATTCTAATTTTAAGAGTGAGAAACATAAGGATTTGTTGAGTACTTTGTTGTTACTTAAAGAGGAAACAGATGTTGATGGAAACAAGCTCACTTATATTGAAATCAAAGCACTACTTTTGAACATGTTTGCAGCTGGGACAGACACATCATCAAGCACCACAGAATGGGCCATTGCAGAATTAATTCGAAACCCAAGAATTCTAGCTAAAGTCCAAGAAGAATTGGACAAAGTTGTCGGCAGTGATAGGAACGTGAAAGAAGATGACATACCTAACCTACCTTACCTACAAGCAGTGATAAAAGAAACTTTCCGCTTGCATCCATCAACACCTCTTTCCCTCCCGCGAATTGCATCTGAAAGTTGTGAGATTTTTGGGTACCACATTCCAAAGGGTTCAACTCTTTTGGTTAATGTATGGGCCATCGCTCGTGACCCAAAAGAATGGGTTGATCCATTAGAGTTCAAACCTGAAAGGTTCTTACCAGGTGGTGACAAGTGTGATGTTGATGTTAAGGGAAATGATTTTGAAGTTATACCTTTT
Protein sequence

>Msa0351680

MSIWFIALASFTLCILIYRFMKFATRSSSLPLPPGPKPWPIIGNMPHLGPAPHQSIAALAKIHGPLMHLKLGFVDVIVAASGSVAEQFLKVHDANFSSRPPNTGAKYIAYNYQDLVFAPYGPRWRMLRKISSVHLFSNKVMEEFKHLRQEEVARLTSNLASNYSDTKAVNLGQLLNVCTTNALARVMLGRRVFNDGNGGCDPKADEFKEMVLELMVLAGVFNISDFIPSLEWLDLQGVQSKMKKLHKKFDAFLTNIIDERENSNFKSEKHKDLLSTLLLLKEETDVDGNKLTYIEIKALLLNMFAAGTDTSSSTTEWAIAELIRNPRILAKVQEELDKVVGSDRNVKEDDIPNLPYLQAVIKETFRLHPSTPLSLPRIASESCEIFGYHIPKGSTLLVNVWAIARDPKEWVDPLEFKPERFLPGGDKCDVDVKGNDFEVIPF