Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356590 | XP_013459470.1 | 97.736 | 530 | 10 | 2 | 1 | 528 | 1 | 530 | 0.0 | 1075 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356590 | sp|O81020|NPC2_ARATH | 73.387 | 496 | 131 | 1 | 25 | 519 | 17 | 512 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356590 | A0A072UVR5 | 97.736 | 530 | 10 | 2 | 1 | 528 | 1 | 530 | 0.0 | 1075 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0356590 | Msa0402820 | 0.853796 | 1.885595e-61 | -8.615850e-47 |
| Msa0356590 | Msa0449610 | 0.853234 | 2.734896e-61 | -8.615850e-47 |
| Msa0356590 | Msa0497840 | 0.903429 | 3.502370e-79 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356590 | MtrunA17_Chr3g0093341 | 98.352 | 364 | 6 | 0 | 165 | 528 | 13 | 376 | 0.0 | 750 |
| Msa0356590 | MtrunA17_Chr8g0337991 | 63.434 | 495 | 170 | 5 | 34 | 519 | 13 | 505 | 0.0 | 637 |
| Msa0356590 | MtrunA17_Chr3g0104681 | 61.509 | 530 | 197 | 6 | 1 | 527 | 1 | 526 | 0.0 | 634 |
| Msa0356590 | MtrunA17_Chr3g0132121 | 58.700 | 523 | 206 | 6 | 1 | 521 | 1 | 515 | 0.0 | 615 |
| Msa0356590 | MtrunA17_Chr3g0093351 | 95.808 | 167 | 5 | 2 | 1 | 165 | 1 | 167 | 1.52e-111 | 328 |
| Msa0356590 | MtrunA17_Chr8g0338041 | 61.176 | 255 | 93 | 3 | 273 | 527 | 4 | 252 | 7.92e-107 | 320 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356590 | AT2G26870.1 | 73.387 | 496 | 131 | 1 | 25 | 519 | 17 | 512 | 0.0 | 766 |
| Msa0356590 | AT1G07230.1 | 62.147 | 531 | 191 | 7 | 1 | 526 | 1 | 526 | 0.0 | 662 |
| Msa0356590 | AT3G48610.1 | 58.721 | 516 | 196 | 8 | 12 | 519 | 11 | 517 | 0.0 | 599 |
| Msa0356590 | AT3G03530.1 | 61.698 | 483 | 172 | 6 | 34 | 508 | 13 | 490 | 0.0 | 588 |
| Msa0356590 | AT3G03520.1 | 58.600 | 500 | 194 | 7 | 34 | 524 | 15 | 510 | 0.0 | 587 |
| Msa0356590 | AT3G03540.1 | 58.111 | 487 | 188 | 6 | 34 | 510 | 12 | 492 | 0.0 | 558 |
| Msa0356590 | AT3G03520.2 | 63.840 | 401 | 135 | 6 | 34 | 428 | 15 | 411 | 0.0 | 531 |
Find 161 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTCTTGGTAAGAAATTT+AGG | 0.126138 | 3_1:-35980596 | None:intergenic |
| ATGTCTTTCCCTATGGTATT+TGG | 0.182996 | 3_1:-35981293 | None:intergenic |
| ACAATGTTGCTGGGATATTT+TGG | 0.194536 | 3_1:-35977649 | None:intergenic |
| CATCACTTCTTGAGACATTT+TGG | 0.212748 | 3_1:-35974976 | None:intergenic |
| TCAAACAACACATACCAAAA+TGG | 0.236041 | 3_1:+35974557 | Msa0356590:exon |
| GTAGAGATTCCTATTTATTA+AGG | 0.236789 | 3_1:+35981671 | Msa0356590:three_prime_UTR |
| TCTCCCTTTCTTAACTTTAT+CGG | 0.242779 | 3_1:-35981179 | None:intergenic |
| AGGTCGTTATGCAAAGAAAA+TGG | 0.247161 | 3_1:+35981373 | Msa0356590:CDS |
| ACTTCAAATCATTTAGATAT+TGG | 0.250742 | 3_1:-35981699 | None:intergenic |
| ATAATAAGAACTTAAATATA+TGG | 0.255144 | 3_1:+35981594 | Msa0356590:three_prime_UTR |
| CTCCCTTTCTTAACTTTATC+GGG | 0.255451 | 3_1:-35981178 | None:intergenic |
| TGCTCCACCACAACATAATT+TGG | 0.262697 | 3_1:-35977761 | None:intergenic |
| TTGGTTAATCCTTAATAAAT+AGG | 0.268746 | 3_1:-35981680 | None:intergenic |
| TTCTGGGCTCTGTCCTTGTT+TGG | 0.268885 | 3_1:-35980649 | None:intergenic |
| ACGTCGTATAGGTGAAATTT+TGG | 0.286920 | 3_1:-35977704 | None:intergenic |
| CTAACCTGGGCAATCAGTTC+TGG | 0.288533 | 3_1:-35980666 | None:intergenic |
| CCGGTTACACCGTTTATGTT+TGG | 0.288942 | 3_1:-35974753 | None:intergenic |
| CTATTAAAAGTGAAGTTAAA+TGG | 0.297487 | 3_1:-35978010 | None:intergenic |
| GTCACTCGTTTCAAGCAATA+AGG | 0.305377 | 3_1:+35974865 | Msa0356590:CDS |
| GCAATAAGGGAACAAATATT+CGG | 0.315090 | 3_1:+35974879 | Msa0356590:CDS |
| CGGTTACACCGTTTATGTTT+GGG | 0.319206 | 3_1:-35974752 | None:intergenic |
| AAGCAGGGATGCCACGTTAC+TGG | 0.319450 | 3_1:-35977555 | None:intergenic |
| TTCGACAGTCTACATGATAA+TGG | 0.320073 | 3_1:+35977605 | Msa0356590:CDS |
| AAAGTGAAGTTAAATGGTTC+TGG | 0.324779 | 3_1:-35978004 | None:intergenic |
| CAACTTGCAGCAGTGCTAAA+AGG | 0.339743 | 3_1:+35981248 | Msa0356590:CDS |
| AAAGAATAAACTATAACTAT+AGG | 0.340742 | 3_1:-35981621 | None:intergenic |
| CATTGTTCTATAGGAACTTA+AGG | 0.351241 | 3_1:+35977666 | Msa0356590:CDS |
| CATCGTATGTAATCAAGAAT+AGG | 0.354617 | 3_1:-35977910 | None:intergenic |
| AAGAATAAACTATAACTATA+GGG | 0.359876 | 3_1:-35981620 | None:intergenic |
| CCAAGCCCTGATGGGATTGT+AGG | 0.363317 | 3_1:+35977980 | Msa0356590:CDS |
| CCAAACATAAACGGTGTAAC+CGG | 0.363905 | 3_1:+35974753 | Msa0356590:CDS |
| ATTTGGTAACTTTCCTTCCT+TGG | 0.373481 | 3_1:-35977744 | None:intergenic |
| GTTATTGATGCAGTTGTTCA+TGG | 0.377316 | 3_1:+35980494 | Msa0356590:intron |
| GAATAATTTGACAATGTTGA+TGG | 0.391782 | 3_1:-35974534 | None:intergenic |
| CATGATAATGGATTCGACTT+TGG | 0.393661 | 3_1:+35977617 | Msa0356590:CDS |
| TTCCTATAGAACAATGTTGC+TGG | 0.411661 | 3_1:-35977659 | None:intergenic |
| TTTCTTAACTTTATCGGGGT+TGG | 0.423464 | 3_1:-35981173 | None:intergenic |
| TATATCACCTTGGATTGAAA+AGG | 0.424951 | 3_1:+35978060 | Msa0356590:CDS |
| TCTGGCCCTACAATCCCATC+AGG | 0.432545 | 3_1:-35977986 | None:intergenic |
| CAAACAACACATACCAAAAT+GGG | 0.433124 | 3_1:+35974558 | Msa0356590:exon |
| TCCCAGCAACATTGTTCTAT+AGG | 0.439940 | 3_1:+35977657 | Msa0356590:CDS |
| TGCTCAACAAGCTTATTCAA+TGG | 0.444721 | 3_1:+35974944 | Msa0356590:CDS |
| CTTGACCCGGCTCCGATGAA+TGG | 0.445601 | 3_1:+35974918 | Msa0356590:CDS |
| AACACTCATGTCTTTCCCTA+TGG | 0.445750 | 3_1:-35981300 | None:intergenic |
| GTTAAGAGGTTCTTTGAAGC+AGG | 0.448531 | 3_1:+35981353 | Msa0356590:CDS |
| ATCGTATGTAATCAAGAATA+GGG | 0.452257 | 3_1:-35977909 | None:intergenic |
| CACGTTACTGGTGGCGCCGC+CGG | 0.457806 | 3_1:-35977543 | None:intergenic |
| GCTTAAATGTCACGTCGTAT+AGG | 0.459929 | 3_1:-35977715 | None:intergenic |
| GACGATCTTGTAGTCAAAGA+AGG | 0.460808 | 3_1:-35981428 | None:intergenic |
| TAACCTGGGCAATCAGTTCT+GGG | 0.461408 | 3_1:-35980665 | None:intergenic |
| GACAATGTTGATGGAAGAAA+AGG | 0.463631 | 3_1:-35974525 | None:intergenic |
| TTTCTATGTCTTTGTTTCTG+AGG | 0.465860 | 3_1:+35981641 | Msa0356590:three_prime_UTR |
| AAACTAAACCCAAACATAAA+CGG | 0.466176 | 3_1:+35974744 | Msa0356590:CDS |
| CGTTCATTCGACCACATGCT+TGG | 0.466462 | 3_1:+35974711 | Msa0356590:CDS |
| GCAGTTGTTCATGGGCCAAA+CGG | 0.467041 | 3_1:+35980503 | Msa0356590:intron |
| ATGCGACGGGTGATCATCAT+TGG | 0.467263 | 3_1:-35977813 | None:intergenic |
| GTGGGTAGCCCTTCGCAAGC+AGG | 0.471086 | 3_1:-35977571 | None:intergenic |
| CGTGGGGTGCCAAGCCCTGA+TGG | 0.471304 | 3_1:+35977971 | Msa0356590:CDS |
| CAGTTGTTCATGGGCCAAAC+GGG | 0.471559 | 3_1:+35980504 | Msa0356590:intron |
| GAGTGCACGTAGAGTCGATT+AGG | 0.473638 | 3_1:-35977512 | None:intergenic |
| TGAAACGAGTGACCCGGATC+AGG | 0.474045 | 3_1:-35974855 | None:intergenic |
| TTATAAACAGCAACATGGTC+TGG | 0.475278 | 3_1:-35975011 | None:intergenic |
| CATTCGACCACATGCTTGGT+TGG | 0.475436 | 3_1:+35974715 | Msa0356590:CDS |
| GAAGTATGTGGATCCTGATC+CGG | 0.476798 | 3_1:+35974842 | Msa0356590:CDS |
| CAATAAGGGAACAAATATTC+GGG | 0.480672 | 3_1:+35974880 | Msa0356590:CDS |
| TCCAGCCCATTCATCTCTCT+TGG | 0.480939 | 3_1:-35980609 | None:intergenic |
| TCTTACCAAGAGAGATGAAT+GGG | 0.482147 | 3_1:+35980604 | Msa0356590:CDS |
| CACGTAGAGTCGATTAGGTT+GGG | 0.487282 | 3_1:-35977507 | None:intergenic |
| CGATTAGGTTGGGTGGAAGC+TGG | 0.489069 | 3_1:-35977497 | None:intergenic |
| CCTACAATCCCATCAGGGCT+TGG | 0.489672 | 3_1:-35977980 | None:intergenic |
| TCAAGGACAAATGTTCGTTA+AGG | 0.491055 | 3_1:+35977844 | Msa0356590:CDS |
| GCAAATCCATTCATCGGAGC+CGG | 0.491323 | 3_1:-35974924 | None:intergenic |
| ACATGGATGAAGCAGTTAAG+AGG | 0.494562 | 3_1:+35981339 | Msa0356590:CDS |
| TACGTGCACTCGGCAACATC+CGG | 0.495082 | 3_1:+35977524 | Msa0356590:CDS |
| CAATTGCATGGGAATTGTGA+AGG | 0.495464 | 3_1:-35974647 | None:intergenic |
| GGTCGTTATGCAAAGAAAAT+GGG | 0.495977 | 3_1:+35981374 | Msa0356590:CDS |
| AAGTATGTGGATCCTGATCC+GGG | 0.497024 | 3_1:+35974843 | Msa0356590:CDS |
| AACCCCGATAAAGTTAAGAA+AGG | 0.497102 | 3_1:+35981175 | Msa0356590:CDS |
| GAATGGGCTGGAACATTTGA+AGG | 0.498967 | 3_1:+35980620 | Msa0356590:CDS |
| TCACTCGTTTCAAGCAATAA+GGG | 0.504495 | 3_1:+35974866 | Msa0356590:CDS |
| AACTTTCCTTCCTTGGCATG+AGG | 0.505768 | 3_1:-35977737 | None:intergenic |
| ACCCCGATAAAGTTAAGAAA+GGG | 0.510422 | 3_1:+35981176 | Msa0356590:CDS |
| ATGTTGCTACGCCTGTGCGT+GGG | 0.512684 | 3_1:+35977954 | Msa0356590:CDS |
| TTCTTACCAAGAGAGATGAA+TGG | 0.513945 | 3_1:+35980603 | Msa0356590:CDS |
| TGTCGAAAATAGTTTGTTGT+GGG | 0.515550 | 3_1:-35977589 | None:intergenic |
| ATGTCTCAAGAAGTGATGAA+TGG | 0.517495 | 3_1:+35974981 | Msa0356590:CDS |
| GTAGGAGTTGGTGACCCGTT+TGG | 0.522381 | 3_1:-35980518 | None:intergenic |
| ACTAGTTATCCAAATACCAT+AGG | 0.524620 | 3_1:+35981284 | Msa0356590:CDS |
| ATATCACCTTGGATTGAAAA+GGG | 0.533246 | 3_1:+35978061 | Msa0356590:CDS |
| TCCTATAGAACAATGTTGCT+GGG | 0.533909 | 3_1:-35977658 | None:intergenic |
| AATTGCATGGGAATTGTGAA+GGG | 0.534580 | 3_1:-35974646 | None:intergenic |
| GAGTGTTCATATTCTGATGT+AGG | 0.534943 | 3_1:-35980536 | None:intergenic |
| ATAGGGTTTCGTTCCACTGT+GGG | 0.535205 | 3_1:-35977892 | None:intergenic |
| CGTGGCATCCCTGCTTGCGA+AGG | 0.535237 | 3_1:+35977562 | Msa0356590:CDS |
| TTATGTAGCAATAGCATGAA+AGG | 0.538626 | 3_1:+35981494 | Msa0356590:three_prime_UTR |
| CAAATCCATTCATCGGAGCC+GGG | 0.541533 | 3_1:-35974923 | None:intergenic |
| CTACCATTGCTATATCACCT+TGG | 0.542037 | 3_1:+35978050 | Msa0356590:CDS |
| ACCAAGAGAGATGAATGGGC+TGG | 0.545131 | 3_1:+35980608 | Msa0356590:CDS |
| CAAGCCCTGATGGGATTGTA+GGG | 0.545332 | 3_1:+35977981 | Msa0356590:CDS |
| GCACGTAGAGTCGATTAGGT+TGG | 0.546979 | 3_1:-35977508 | None:intergenic |
| TTATTGATGCAGTTGTTCAT+GGG | 0.551462 | 3_1:+35980495 | Msa0356590:intron |
| GACATTTAAGCCTCATGCCA+AGG | 0.551592 | 3_1:+35977727 | Msa0356590:CDS |
| TGTTGAGCAAATCCATTCAT+CGG | 0.556785 | 3_1:-35974930 | None:intergenic |
| CCGTCGCATGATGTGTATCA+AGG | 0.559840 | 3_1:+35977827 | Msa0356590:CDS |
| GACGGGTGATCATCATTGGC+AGG | 0.561070 | 3_1:-35977809 | None:intergenic |
| GTTACCAAATTATGTTGTGG+TGG | 0.565572 | 3_1:+35977757 | Msa0356590:CDS |
| TTTAAGCCTCATGCCAAGGA+AGG | 0.567585 | 3_1:+35977731 | Msa0356590:CDS |
| CAAGCATGTGGTCGAATGAA+CGG | 0.569799 | 3_1:-35974710 | None:intergenic |
| GGGCTTGGCACCCCACGCAC+AGG | 0.571388 | 3_1:-35977965 | None:intergenic |
| GTGGGGTGCCAAGCCCTGAT+GGG | 0.571428 | 3_1:+35977972 | Msa0356590:CDS |
| TGGGTAGCCCTTCGCAAGCA+GGG | 0.572129 | 3_1:-35977570 | None:intergenic |
| CTAGTTATCCAAATACCATA+GGG | 0.572467 | 3_1:+35981285 | Msa0356590:CDS |
| TTGATTACATACGATGAGCA+TGG | 0.575436 | 3_1:+35977917 | Msa0356590:CDS |
| TAATCGACTCTACGTGCACT+CGG | 0.578331 | 3_1:+35977514 | Msa0356590:CDS |
| TCCCTTTCTTAACTTTATCG+GGG | 0.581194 | 3_1:-35981177 | None:intergenic |
| CATGTTGCTACGCCTGTGCG+TGG | 0.582233 | 3_1:+35977953 | Msa0356590:CDS |
| AAAGCTAAGTGAATTTCAGC+AGG | 0.582285 | 3_1:+35981217 | Msa0356590:CDS |
| AGGTTGGGTGGAAGCTGGCA+CGG | 0.582538 | 3_1:-35977492 | None:intergenic |
| AGGACAAATGTTCGTTAAGG+AGG | 0.583390 | 3_1:+35977847 | Msa0356590:CDS |
| CAAACATAAACGGTGTAACC+GGG | 0.584400 | 3_1:+35974754 | Msa0356590:CDS |
| TCATATTCTGATGTAGGAGT+TGG | 0.584667 | 3_1:-35980530 | None:intergenic |
| TCTTTGTTTCTGAGGTGCAA+TGG | 0.584852 | 3_1:+35981649 | Msa0356590:three_prime_UTR |
| CAAGAACGAAGCGAAGTATG+TGG | 0.586030 | 3_1:+35974830 | Msa0356590:CDS |
| GGAGGACACGTCACTTGACC+CGG | 0.586091 | 3_1:+35974905 | Msa0356590:CDS |
| ACACTCATCCATTGCAGCAA+CGG | 0.587500 | 3_1:+35980553 | Msa0356590:CDS |
| CTGTCGAAAATAGTTTGTTG+TGG | 0.587797 | 3_1:-35977590 | None:intergenic |
| GATAAAGTTAAGAAAGGGAG+AGG | 0.587867 | 3_1:+35981181 | Msa0356590:CDS |
| TTCCATTACTAAAATGACGA+TGG | 0.588590 | 3_1:-35974685 | None:intergenic |
| CTTGATACACATCATGCGAC+GGG | 0.588931 | 3_1:-35977826 | None:intergenic |
| CAAGGTGATATAGCAATGGT+AGG | 0.589859 | 3_1:-35978049 | None:intergenic |
| GTGCACTCGGCAACATCCGG+CGG | 0.592811 | 3_1:+35977527 | Msa0356590:CDS |
| GAGCCCAGAACTGATTGCCC+AGG | 0.601081 | 3_1:+35980662 | Msa0356590:CDS |
| ATTGCTTGAAACGAGTGACC+CGG | 0.601810 | 3_1:-35974861 | None:intergenic |
| TGTTGCTACGCCTGTGCGTG+GGG | 0.602112 | 3_1:+35977955 | Msa0356590:CDS |
| CCTTGGATTGAAAAGGGCAC+CGG | 0.602384 | 3_1:+35978067 | Msa0356590:CDS |
| CCTTGATACACATCATGCGA+CGG | 0.605905 | 3_1:-35977827 | None:intergenic |
| GTGGCATCCCTGCTTGCGAA+GGG | 0.615307 | 3_1:+35977563 | Msa0356590:CDS |
| TTACATACGATGAGCATGGA+GGG | 0.615620 | 3_1:+35977921 | Msa0356590:CDS |
| CGGCGGCGCCACCAGTAACG+TGG | 0.620851 | 3_1:+35977544 | Msa0356590:CDS |
| CTGGCCCTACAATCCCATCA+GGG | 0.621880 | 3_1:-35977985 | None:intergenic |
| TCTTCATCCAACCAAGCATG+TGG | 0.622438 | 3_1:-35974722 | None:intergenic |
| TTGAAGGTATTGTCCAAACA+AGG | 0.622924 | 3_1:+35980636 | Msa0356590:CDS |
| AGGAGGTGTACGAGACGCTG+AGG | 0.625329 | 3_1:+35977864 | Msa0356590:CDS |
| ATCTTCAAACACAAAACCAT+AGG | 0.625369 | 3_1:+35981454 | Msa0356590:CDS |
| AAAGTTACCAAATTATGTTG+TGG | 0.626625 | 3_1:+35977754 | Msa0356590:CDS |
| TAAGCAAGGAAAATATTACA+TGG | 0.627619 | 3_1:+35981322 | Msa0356590:CDS |
| TGTTGATGGAAGAAAAGGTG+AGG | 0.627909 | 3_1:-35974520 | None:intergenic |
| CAGGGATGCCACGTTACTGG+TGG | 0.627930 | 3_1:-35977552 | None:intergenic |
| AAGGGAACAAATATTCGGGT+CGG | 0.628092 | 3_1:+35974884 | Msa0356590:CDS |
| GTAGAGTCGATTAGGTTGGG+TGG | 0.632908 | 3_1:-35977504 | None:intergenic |
| GGCAGGTAACAACTTAGTGT+CGG | 0.637633 | 3_1:-35977792 | None:intergenic |
| TAATTGAGCTGATTCTAACC+CGG | 0.639858 | 3_1:-35974772 | None:intergenic |
| AATCCAAGGTGATATAGCAA+TGG | 0.641455 | 3_1:-35978053 | None:intergenic |
| CGCTGAGGGCGAGCCCACAG+TGG | 0.646093 | 3_1:+35977879 | Msa0356590:CDS |
| GGAACAAATATTCGGGTCGG+AGG | 0.646599 | 3_1:+35974887 | Msa0356590:CDS |
| GGAGGTGTACGAGACGCTGA+GGG | 0.653489 | 3_1:+35977865 | Msa0356590:CDS |
| AATAGGGTTTCGTTCCACTG+TGG | 0.656689 | 3_1:-35977893 | None:intergenic |
| ATTATGTTGTGGTGGAGCAG+CGG | 0.656914 | 3_1:+35977765 | Msa0356590:CDS |
| AAAGACATGAGTGTTAAGCA+AGG | 0.660295 | 3_1:+35981308 | Msa0356590:CDS |
| ATTACATACGATGAGCATGG+AGG | 0.666586 | 3_1:+35977920 | Msa0356590:CDS |
| GTGTCTTATAAACAGCAACA+TGG | 0.718255 | 3_1:-35975016 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTTTATTTTTT+AGG | - | chr3_1:35977143-35977162 | None:intergenic | 0.0% |
| !!! | ATCATTTCATTATTTTTTTA+AGG | + | chr3_1:35975108-35975127 | Msa0356590:intron | 10.0% |
| !!! | AAGTTTTAAATCATTTTATT+TGG | + | chr3_1:35975131-35975150 | Msa0356590:intron | 10.0% |
| !!! | CAAATAAAATGATTTTTTTT+GGG | - | chr3_1:35975342-35975361 | None:intergenic | 10.0% |
| !!! | TTTTTTTATTTTTGTTTGAA+AGG | + | chr3_1:35975423-35975442 | Msa0356590:intron | 10.0% |
| !!! | TTTTTTATTTTTGTTTGAAA+GGG | + | chr3_1:35975424-35975443 | Msa0356590:intron | 10.0% |
| !! | GGTAAAAAAAATAAAATAAA+AGG | - | chr3_1:35975886-35975905 | None:intergenic | 10.0% |
| !!! | TATCATGTAATTTTTTTTTA+AGG | - | chr3_1:35976798-35976817 | None:intergenic | 10.0% |
| !! | AATTATTAGTAAAAACATAT+AGG | + | chr3_1:35978149-35978168 | Msa0356590:intron | 10.0% |
| !!! | TATTATCTAAAATTAAGTTA+AGG | + | chr3_1:35978726-35978745 | Msa0356590:intron | 10.0% |
| !!! | TAATTTTGCTAAAATATAAA+CGG | + | chr3_1:35978760-35978779 | Msa0356590:intron | 10.0% |
| !!! | TCAAATTATTTTAGTTTTAT+TGG | + | chr3_1:35978805-35978824 | Msa0356590:intron | 10.0% |
| !! | AAAGATTTAATTCATATATA+CGG | - | chr3_1:35981081-35981100 | None:intergenic | 10.0% |
| !!! | TACATAATCTTATTTTATTT+TGG | - | chr3_1:35981481-35981500 | None:intergenic | 10.0% |
| !! | ATAATAAGAACTTAAATATA+TGG | + | chr3_1:35981594-35981613 | Msa0356590:three_prime_UTR | 10.0% |
| !!! | CCAAATAAAATGATTTTTTT+TGG | - | chr3_1:35975343-35975362 | None:intergenic | 15.0% |
| !!! | CCAAAAAAAATCATTTTATT+TGG | + | chr3_1:35975340-35975359 | Msa0356590:intron | 15.0% |
| !!! | AAAAAAATCATTTTATTTGG+TGG | + | chr3_1:35975343-35975362 | Msa0356590:intron | 15.0% |
| !! | AAAATTAAAAATTACACTAC+TGG | + | chr3_1:35975546-35975565 | Msa0356590:intron | 15.0% |
| !! | AAAATAAGAAACAATAGATT+TGG | + | chr3_1:35975658-35975677 | Msa0356590:intron | 15.0% |
| !!! | ACTATTTTCTTTAAATACAT+GGG | - | chr3_1:35975963-35975982 | None:intergenic | 15.0% |
| !!! | AACTATTTTCTTTAAATACA+TGG | - | chr3_1:35975964-35975983 | None:intergenic | 15.0% |
| !!! | CTTTTGAAGAATTTAATATA+CGG | - | chr3_1:35976058-35976077 | None:intergenic | 15.0% |
| !!! | TTTTATTTAGATTAGATTAG+TGG | + | chr3_1:35976152-35976171 | Msa0356590:intron | 15.0% |
| !!! | AGAAGTATAATAATTCAATT+AGG | + | chr3_1:35976388-35976407 | Msa0356590:intron | 15.0% |
| !! | GAAGTATAATAATTCAATTA+GGG | + | chr3_1:35976389-35976408 | Msa0356590:intron | 15.0% |
| !! | AAGTATAATAATTCAATTAG+GGG | + | chr3_1:35976390-35976409 | Msa0356590:intron | 15.0% |
| !! | ATTAATATATTGTATATGAG+TGG | - | chr3_1:35976891-35976910 | None:intergenic | 15.0% |
| !!! | TAATTTTTTTTTTTGGTTAC+AGG | - | chr3_1:35977110-35977129 | None:intergenic | 15.0% |
| !! | TATGAAAGTTATGATAATTA+AGG | - | chr3_1:35977452-35977471 | None:intergenic | 15.0% |
| !!! | ATTTTGTGATGATTTTTTTT+GGG | - | chr3_1:35978312-35978331 | None:intergenic | 15.0% |
| !!! | AATTTTGTGATGATTTTTTT+TGG | - | chr3_1:35978313-35978332 | None:intergenic | 15.0% |
| !! | AATTAAGTTAAGGAAAAAAT+TGG | + | chr3_1:35978736-35978755 | Msa0356590:intron | 15.0% |
| !! | ATTAAGTTAAGGAAAAAATT+GGG | + | chr3_1:35978737-35978756 | Msa0356590:intron | 15.0% |
| !!! | AATTTTGCTAAAATATAAAC+GGG | + | chr3_1:35978761-35978780 | Msa0356590:intron | 15.0% |
| !!! | TTAGTTTTATTGGTTTTATT+TGG | + | chr3_1:35978815-35978834 | Msa0356590:intron | 15.0% |
| !!! | TAGTTTTATTGGTTTTATTT+GGG | + | chr3_1:35978816-35978835 | Msa0356590:intron | 15.0% |
| !! | TTTACAAACTATTAACATAT+TGG | + | chr3_1:35978952-35978971 | Msa0356590:intron | 15.0% |
| !! | GATATATTTGGTTAAAAAAT+TGG | - | chr3_1:35979099-35979118 | None:intergenic | 15.0% |
| !!! | GTTATTACGATAATATTTTT+AGG | + | chr3_1:35979679-35979698 | Msa0356590:intron | 15.0% |
| !!! | TAGAATTTCTTATATTTTGT+GGG | - | chr3_1:35980275-35980294 | None:intergenic | 15.0% |
| !!! | TTAGAATTTCTTATATTTTG+TGG | - | chr3_1:35980276-35980295 | None:intergenic | 15.0% |
| !!! | GTTTTGATTAGATTTAATTA+AGG | + | chr3_1:35980298-35980317 | Msa0356590:intron | 15.0% |
| !!! | TCATTTTCTCAAAATTTTAT+CGG | - | chr3_1:35980762-35980781 | None:intergenic | 15.0% |
| !! | AAGAATAAACTATAACTATA+GGG | - | chr3_1:35981623-35981642 | None:intergenic | 15.0% |
| !! | AAAGAATAAACTATAACTAT+AGG | - | chr3_1:35981624-35981643 | None:intergenic | 15.0% |
| !!! | TGAGGTTTTATTTTTGTTTT+GGG | - | chr3_1:35974505-35974524 | None:intergenic | 20.0% |
| !!! | AAGAATATTCGTTTTGAATT+CGG | - | chr3_1:35974810-35974829 | None:intergenic | 20.0% |
| !! | TTGAATTCTAATTATACTAC+TGG | + | chr3_1:35975508-35975527 | Msa0356590:intron | 20.0% |
| !!! | AAAGTTCAAACTTTGAATTT+TGG | - | chr3_1:35975907-35975926 | None:intergenic | 20.0% |
| !!! | GTTTGAACTTTTAATTCTTT+AGG | + | chr3_1:35975916-35975935 | Msa0356590:intron | 20.0% |
| !! | ATAAAAATTACAAATAGCAG+AGG | + | chr3_1:35976296-35976315 | Msa0356590:intron | 20.0% |
| !! | TAAAAATTACAAATAGCAGA+GGG | + | chr3_1:35976297-35976316 | Msa0356590:intron | 20.0% |
| !! | TTTGATGAATAAAGCAAAAA+AGG | - | chr3_1:35976460-35976479 | None:intergenic | 20.0% |
| !! | AAGAGTTAATAAAGCAAAAA+AGG | - | chr3_1:35976493-35976512 | None:intergenic | 20.0% |
| !! | GTTCAAAAAAAACTATTGAT+TGG | - | chr3_1:35976962-35976981 | None:intergenic | 20.0% |
| !! | AATTGTGATACAAAACTAAT+TGG | + | chr3_1:35977059-35977078 | Msa0356590:intron | 20.0% |
| !! | ATGAAGAGAAAAAAAAATCT+TGG | + | chr3_1:35977416-35977435 | Msa0356590:intron | 20.0% |
| !! | CTATTAAAAGTGAAGTTAAA+TGG | - | chr3_1:35978013-35978032 | None:intergenic | 20.0% |
| !!! | CATTTAACTTCACTTTTAAT+AGG | + | chr3_1:35978011-35978030 | Msa0356590:CDS | 20.0% |
| !! | ATGAAAATCATTTATGTTGA+TGG | - | chr3_1:35978415-35978434 | None:intergenic | 20.0% |
| !!! | TCCTTCTTTGTTTTTTTTTT+CGG | + | chr3_1:35978445-35978464 | Msa0356590:intron | 20.0% |
| !!! | TTTTTCGGTTTTTTTTTGTT+TGG | + | chr3_1:35978460-35978479 | Msa0356590:intron | 20.0% |
| !!! | TTTTCGGTTTTTTTTTGTTT+GGG | + | chr3_1:35978461-35978480 | Msa0356590:intron | 20.0% |
| !!! | ATTTAGCTATGATTGTTTTT+TGG | + | chr3_1:35978496-35978515 | Msa0356590:intron | 20.0% |
| !!! | GATTTTTTTTCAATGAAATC+TGG | + | chr3_1:35978547-35978566 | Msa0356590:intron | 20.0% |
| !!! | ATTTTGCTAAAATATAAACG+GGG | + | chr3_1:35978762-35978781 | Msa0356590:intron | 20.0% |
| !! | ATGTCTCTTATAAATATGAT+CGG | - | chr3_1:35979047-35979066 | None:intergenic | 20.0% |
| !!! | TCAACAAAAGTTGATATATT+TGG | - | chr3_1:35979111-35979130 | None:intergenic | 20.0% |
| !! | ATCTATAAAACAAATAGAAC+TGG | + | chr3_1:35979173-35979192 | Msa0356590:intron | 20.0% |
| !!! | TTTTCACACTACTTTAAAAA+TGG | + | chr3_1:35979402-35979421 | Msa0356590:intron | 20.0% |
| !!! | ATTAAAACCCAAAAAGTATA+TGG | - | chr3_1:35979465-35979484 | None:intergenic | 20.0% |
| !! | AAATAATATGATCCATTAGT+TGG | + | chr3_1:35979787-35979806 | Msa0356590:intron | 20.0% |
| !! | TATTTATTGATCACTTTCAT+TGG | + | chr3_1:35980176-35980195 | Msa0356590:intron | 20.0% |
| !! | GATAGTAAATTATACGATTT+CGG | - | chr3_1:35980345-35980364 | None:intergenic | 20.0% |
| !! | CGTATAATTTACTATCTATT+TGG | + | chr3_1:35980349-35980368 | Msa0356590:intron | 20.0% |
| !! | TTGGTTAATCCTTAATAAAT+AGG | - | chr3_1:35981683-35981702 | None:intergenic | 20.0% |
| !! | ACTTCAAATCATTTAGATAT+TGG | - | chr3_1:35981702-35981721 | None:intergenic | 20.0% |
| !!! | TTATTTTTGTTTTGGGATAG+TGG | - | chr3_1:35974498-35974517 | None:intergenic | 25.0% |
| !!! | GTGAGGTTTTATTTTTGTTT+TGG | - | chr3_1:35974506-35974525 | None:intergenic | 25.0% |
| ! | GAATAATTTGACAATGTTGA+TGG | - | chr3_1:35974537-35974556 | None:intergenic | 25.0% |
| !! | TATTGGATTTTCAATTGCAT+GGG | - | chr3_1:35974661-35974680 | None:intergenic | 25.0% |
| !! | TTATTGGATTTTCAATTGCA+TGG | - | chr3_1:35974662-35974681 | None:intergenic | 25.0% |
| !! | AAAATGACGATGGTTTTTAT+TGG | - | chr3_1:35974678-35974697 | None:intergenic | 25.0% |
| ! | AAACTAAACCCAAACATAAA+CGG | + | chr3_1:35974744-35974763 | Msa0356590:CDS | 25.0% |
| !!! | AGAATATTCGTTTTGAATTC+GGG | - | chr3_1:35974809-35974828 | None:intergenic | 25.0% |
| !!! | ATTGGTTAATTAGTTTTGAC+TGG | + | chr3_1:35975459-35975478 | Msa0356590:intron | 25.0% |
| ! | TTTCTTTAAATACATGGGAT+AGG | - | chr3_1:35975958-35975977 | None:intergenic | 25.0% |
| !! | ATTCGTTAATTGCGATTTTA+TGG | + | chr3_1:35976114-35976133 | Msa0356590:intron | 25.0% |
| !! | AAAGGTATGATATTGTAGAT+TGG | + | chr3_1:35976325-35976344 | Msa0356590:intron | 25.0% |
| ! | GATTTGGAAAAACTTCAAAT+TGG | + | chr3_1:35976634-35976653 | Msa0356590:intron | 25.0% |
| ! | CAAACACGTTATTAAATAGA+AGG | - | chr3_1:35976696-35976715 | None:intergenic | 25.0% |
| !!! | AGAATCGTGTCATTTTTTTA+AGG | - | chr3_1:35976768-35976787 | None:intergenic | 25.0% |
| ! | AATGAAAAGTTAGAGTTACA+TGG | - | chr3_1:35976917-35976936 | None:intergenic | 25.0% |
| ! | TCATTAGTATATATACATGC+CGG | + | chr3_1:35977166-35977185 | Msa0356590:intron | 25.0% |
| ! | AAAGTTACCAAATTATGTTG+TGG | + | chr3_1:35977754-35977773 | Msa0356590:CDS | 25.0% |
| ! | ATCGTATGTAATCAAGAATA+GGG | - | chr3_1:35977912-35977931 | None:intergenic | 25.0% |
| !!! | TAACTTCACTTTTAATAGGT+TGG | + | chr3_1:35978015-35978034 | Msa0356590:CDS | 25.0% |
| !!! | AACTTCACTTTTAATAGGTT+GGG | + | chr3_1:35978016-35978035 | Msa0356590:CDS | 25.0% |
| !!! | TGGGTTTTTGAAGAATTTTA+TGG | - | chr3_1:35978293-35978312 | None:intergenic | 25.0% |
| ! | ACCGAAAAAAAAAACAAAGA+AGG | - | chr3_1:35978449-35978468 | None:intergenic | 25.0% |
| ! | ATCATAGCTAAATTTCAACT+TGG | - | chr3_1:35978489-35978508 | None:intergenic | 25.0% |
| !!! | CTATGATTGTTTTTTGGTTT+TGG | + | chr3_1:35978502-35978521 | Msa0356590:intron | 25.0% |
| !!! | TTGTTTTTTGGTTTTGGTTA+TGG | + | chr3_1:35978508-35978527 | Msa0356590:intron | 25.0% |
| !!! | TTATGGCTGATTTTGTTTAT+GGG | + | chr3_1:35978525-35978544 | Msa0356590:intron | 25.0% |
| ! | TGTTGACACTTTATAACATA+AGG | + | chr3_1:35978675-35978694 | Msa0356590:intron | 25.0% |
| ! | ATCTTATCCCATCATAAAAT+TGG | + | chr3_1:35978865-35978884 | Msa0356590:intron | 25.0% |
| !!! | GTTAAAAACGAATGTTTTAG+AGG | - | chr3_1:35978983-35979002 | None:intergenic | 25.0% |
| ! | AAAAGAAGTGAAATCCAATT+TGG | - | chr3_1:35979312-35979331 | None:intergenic | 25.0% |
| !! | AAATTGGATTTCACTTCTTT+TGG | + | chr3_1:35979311-35979330 | Msa0356590:intron | 25.0% |
| ! | TTGTTAAACTAGATTTGAGT+AGG | - | chr3_1:35979351-35979370 | None:intergenic | 25.0% |
| ! | AAAGTAGTGTGAAAATTAGA+AGG | - | chr3_1:35979397-35979416 | None:intergenic | 25.0% |
| !!! | ATGAATCTATTGACTTATGT+TGG | + | chr3_1:35979653-35979672 | Msa0356590:intron | 25.0% |
| ! | AAATGTCTCTTGGATTATTT+GGG | + | chr3_1:35979749-35979768 | Msa0356590:intron | 25.0% |
| !!! | TTAATCATTTGATGATGCTT+AGG | - | chr3_1:35980204-35980223 | None:intergenic | 25.0% |
| ! | ATTAAGCAATATAGTGATGA+GGG | - | chr3_1:35980419-35980438 | None:intergenic | 25.0% |
| ! | CCTTGTTGAAATTATTGAAA+CGG | + | chr3_1:35980459-35980478 | Msa0356590:intron | 25.0% |
| ! | TTAAGAAGTGATCACTTATA+AGG | + | chr3_1:35980881-35980900 | Msa0356590:intron | 25.0% |
| ! | TAAGCAAGGAAAATATTACA+TGG | + | chr3_1:35981322-35981341 | Msa0356590:CDS | 25.0% |
| !!! | CTTATTTTATTTTGGTCCTA+TGG | - | chr3_1:35981473-35981492 | None:intergenic | 25.0% |
| ! | GTAGAGATTCCTATTTATTA+AGG | + | chr3_1:35981671-35981690 | Msa0356590:three_prime_UTR | 25.0% |
| TCAAACAACACATACCAAAA+TGG | + | chr3_1:35974557-35974576 | Msa0356590:exon | 30.0% | |
| CAAACAACACATACCAAAAT+GGG | + | chr3_1:35974558-35974577 | Msa0356590:exon | 30.0% | |
| ! | TAGTAGTAGAGTGAGTTTTT+CGG | - | chr3_1:35974587-35974606 | None:intergenic | 30.0% |
| !! | AACCATCGTCATTTTAGTAA+TGG | + | chr3_1:35974683-35974702 | Msa0356590:CDS | 30.0% |
| TTCCATTACTAAAATGACGA+TGG | - | chr3_1:35974688-35974707 | None:intergenic | 30.0% | |
| GCAATAAGGGAACAAATATT+CGG | + | chr3_1:35974879-35974898 | Msa0356590:CDS | 30.0% | |
| CAATAAGGGAACAAATATTC+GGG | + | chr3_1:35974880-35974899 | Msa0356590:CDS | 30.0% | |
| ! | TCAGCAACGTTAAAACTTTT+AGG | + | chr3_1:35975235-35975254 | Msa0356590:intron | 30.0% |
| !!! | GATTTTTTTTGGGTGTAAAC+CGG | - | chr3_1:35975332-35975351 | None:intergenic | 30.0% |
| AAAGGGAAAAAAGTTGCTAT+TGG | + | chr3_1:35975441-35975460 | Msa0356590:intron | 30.0% | |
| AAACAAAGAGGAAATATGTG+AGG | - | chr3_1:35975615-35975634 | None:intergenic | 30.0% | |
| ! | CATATTTCCTCTTTGTTTGA+AGG | + | chr3_1:35975617-35975636 | Msa0356590:intron | 30.0% |
| ! | TAAAGTACCTTCAAACAAAG+AGG | - | chr3_1:35975627-35975646 | None:intergenic | 30.0% |
| ! | GGAGTTAGTATATTTTACAG+AGG | + | chr3_1:35976228-35976247 | Msa0356590:intron | 30.0% |
| ! | GTTAGTATATTTTACAGAGG+AGG | + | chr3_1:35976231-35976250 | Msa0356590:intron | 30.0% |
| AAATAGCAGAGGGTTAAAAA+AGG | + | chr3_1:35976307-35976326 | Msa0356590:intron | 30.0% | |
| !! | TTTGCTTGCAATTTTGTTGT+TGG | + | chr3_1:35976599-35976618 | Msa0356590:intron | 30.0% |
| TTGGTGCATGTTATATGATT+TGG | + | chr3_1:35976618-35976637 | Msa0356590:intron | 30.0% | |
| AACACCAAACAATAGTTATG+AGG | + | chr3_1:35976985-35977004 | Msa0356590:intron | 30.0% | |
| AATGCCTCATAACTATTGTT+TGG | - | chr3_1:35976992-35977011 | None:intergenic | 30.0% | |
| ATTCGTGAAAAAAAGTTACG+AGG | + | chr3_1:35977009-35977028 | Msa0356590:intron | 30.0% | |
| ! | AAAGTTACGAGGCATTAAAT+TGG | + | chr3_1:35977020-35977039 | Msa0356590:intron | 30.0% |
| !! | TTCTTTTTCCTAATTTGTGC+CGG | - | chr3_1:35977188-35977207 | None:intergenic | 30.0% |
| AAGTGACATGATTTCTCATA+TGG | - | chr3_1:35977220-35977239 | None:intergenic | 30.0% | |
| !!! | AATAGATGGTGTTGTTTTTC+GGG | - | chr3_1:35977359-35977378 | None:intergenic | 30.0% |
| !!! | CAATAGATGGTGTTGTTTTT+CGG | - | chr3_1:35977360-35977379 | None:intergenic | 30.0% |
| TCATGTCACAAATCAATAGA+TGG | - | chr3_1:35977373-35977392 | None:intergenic | 30.0% | |
| !! | CTATTGATTTGTGACATGAA+AGG | + | chr3_1:35977374-35977393 | Msa0356590:intron | 30.0% |
| CATAACTTTCATATGTTCGT+AGG | + | chr3_1:35977459-35977478 | Msa0356590:intron | 30.0% | |
| !! | TGTCGAAAATAGTTTGTTGT+GGG | - | chr3_1:35977592-35977611 | None:intergenic | 30.0% |
| CATTGTTCTATAGGAACTTA+AGG | + | chr3_1:35977666-35977685 | Msa0356590:CDS | 30.0% | |
| CATCGTATGTAATCAAGAAT+AGG | - | chr3_1:35977913-35977932 | None:intergenic | 30.0% | |
| AAAGTGAAGTTAAATGGTTC+TGG | - | chr3_1:35978007-35978026 | None:intergenic | 30.0% | |
| TATATCACCTTGGATTGAAA+AGG | + | chr3_1:35978060-35978079 | Msa0356590:CDS | 30.0% | |
| ATATCACCTTGGATTGAAAA+GGG | + | chr3_1:35978061-35978080 | Msa0356590:CDS | 30.0% | |
| ! | ATTTATGTTGATGGAGTGTT+GGG | - | chr3_1:35978406-35978425 | None:intergenic | 30.0% |
| !! | GTTATGGCTGATTTTGTTTA+TGG | + | chr3_1:35978524-35978543 | Msa0356590:intron | 30.0% |
| GTTTATTCAAGCTAGACATA+TGG | + | chr3_1:35978895-35978914 | Msa0356590:intron | 30.0% | |
| !! | TGAAATCCAATTTGGTGTAA+TGG | - | chr3_1:35979304-35979323 | None:intergenic | 30.0% |
| !!! | ACTTTTTGGGTTTTAATCTC+CGG | + | chr3_1:35979468-35979487 | Msa0356590:intron | 30.0% |
| ! | ACATTTTGCAATTTGACAAC+CGG | - | chr3_1:35979490-35979509 | None:intergenic | 30.0% |
| CAAATGTCTCTTGGATTATT+TGG | + | chr3_1:35979748-35979767 | Msa0356590:intron | 30.0% | |
| !! | TTATTTGGGTTGGTTTCTTA+TGG | + | chr3_1:35979763-35979782 | Msa0356590:intron | 30.0% |
| TTTGTCCTAGATCAAACTTA+TGG | + | chr3_1:35979811-35979830 | Msa0356590:intron | 30.0% | |
| ATTGTCCATAAGTTTGATCT+AGG | - | chr3_1:35979819-35979838 | None:intergenic | 30.0% | |
| ! | ATGGACAATTTTCTACTTGA+TGG | + | chr3_1:35979830-35979849 | Msa0356590:intron | 30.0% |
| ! | TGGACAATTTTCTACTTGAT+GGG | + | chr3_1:35979831-35979850 | Msa0356590:intron | 30.0% |
| CGTACAATTCTACTCATTAA+TGG | - | chr3_1:35980029-35980048 | None:intergenic | 30.0% | |
| !!! | CTGCAATCAATTGTTGATTT+TGG | - | chr3_1:35980252-35980271 | None:intergenic | 30.0% |
| !!! | CTATTTGGTGTCTTTTTTTC+AGG | + | chr3_1:35980364-35980383 | Msa0356590:intron | 30.0% |
| CATTAAGCAATATAGTGATG+AGG | - | chr3_1:35980420-35980439 | None:intergenic | 30.0% | |
| CCGTTTCAATAATTTCAACA+AGG | - | chr3_1:35980462-35980481 | None:intergenic | 30.0% | |
| TTATTGATGCAGTTGTTCAT+GGG | + | chr3_1:35980495-35980514 | Msa0356590:intron | 30.0% | |
| TCTCTCTTGGTAAGAAATTT+AGG | - | chr3_1:35980599-35980618 | None:intergenic | 30.0% | |
| TTGTTCACTTCTATAAAGCA+CGG | + | chr3_1:35980689-35980708 | Msa0356590:intron | 30.0% | |
| TTCAATGTAATCACAAGTGT+CGG | + | chr3_1:35980787-35980806 | Msa0356590:intron | 30.0% | |
| TCTCCCTTTCTTAACTTTAT+CGG | - | chr3_1:35981182-35981201 | None:intergenic | 30.0% | |
| ACTAGTTATCCAAATACCAT+AGG | + | chr3_1:35981284-35981303 | Msa0356590:CDS | 30.0% | |
| CTAGTTATCCAAATACCATA+GGG | + | chr3_1:35981285-35981304 | Msa0356590:CDS | 30.0% | |
| !!! | TGGTTTTGTGTTTGAAGATT+TGG | - | chr3_1:35981453-35981472 | None:intergenic | 30.0% |
| ATCTTCAAACACAAAACCAT+AGG | + | chr3_1:35981454-35981473 | Msa0356590:CDS | 30.0% | |
| TTATGTAGCAATAGCATGAA+AGG | + | chr3_1:35981494-35981513 | Msa0356590:three_prime_UTR | 30.0% | |
| !! | TTTCTATGTCTTTGTTTCTG+AGG | + | chr3_1:35981641-35981660 | Msa0356590:three_prime_UTR | 30.0% |
| ! | GACAATGTTGATGGAAGAAA+AGG | - | chr3_1:35974528-35974547 | None:intergenic | 35.0% |
| ! | AGTAGTAGAGTGAGTTTTTC+GGG | - | chr3_1:35974586-35974605 | None:intergenic | 35.0% |
| GTGAAGGGAAAAAGTGAAAA+TGG | - | chr3_1:35974634-35974653 | None:intergenic | 35.0% | |
| AATTGCATGGGAATTGTGAA+GGG | - | chr3_1:35974649-35974668 | None:intergenic | 35.0% | |
| ! | TAATTGAGCTGATTCTAACC+CGG | - | chr3_1:35974775-35974794 | None:intergenic | 35.0% |
| !! | TATTCGTTTTGAATTCGGGT+CGG | - | chr3_1:35974805-35974824 | None:intergenic | 35.0% |
| TCACTCGTTTCAAGCAATAA+GGG | + | chr3_1:35974866-35974885 | Msa0356590:CDS | 35.0% | |
| TGTTGAGCAAATCCATTCAT+CGG | - | chr3_1:35974933-35974952 | None:intergenic | 35.0% | |
| TGCTCAACAAGCTTATTCAA+TGG | + | chr3_1:35974944-35974963 | Msa0356590:CDS | 35.0% | |
| ! | CATCACTTCTTGAGACATTT+TGG | - | chr3_1:35974979-35974998 | None:intergenic | 35.0% |
| ATGTCTCAAGAAGTGATGAA+TGG | + | chr3_1:35974981-35975000 | Msa0356590:CDS | 35.0% | |
| TTATAAACAGCAACATGGTC+TGG | - | chr3_1:35975014-35975033 | None:intergenic | 35.0% | |
| GTGTCTTATAAACAGCAACA+TGG | - | chr3_1:35975019-35975038 | None:intergenic | 35.0% | |
| !!! | CTGAGTTTGCTGTTTTTGAT+AGG | + | chr3_1:35975045-35975064 | Msa0356590:CDS | 35.0% |
| TATCTCATATAAGCGCTCTT+AGG | - | chr3_1:35975159-35975178 | None:intergenic | 35.0% | |
| ! | GAGCATTGTGGGATTTAAAT+GGG | - | chr3_1:35975273-35975292 | None:intergenic | 35.0% |
| ! | ATTAATCTCTCGAGCATTGT+GGG | - | chr3_1:35975284-35975303 | None:intergenic | 35.0% |
| ! | TTAGTACCACTCATCTTTTC+TGG | - | chr3_1:35976192-35976211 | None:intergenic | 35.0% |
| GATGAGTGGTACTAAAAAGT+TGG | + | chr3_1:35976197-35976216 | Msa0356590:intron | 35.0% | |
| ! | GGTACTAAAAAGTTGGTTAG+AGG | + | chr3_1:35976204-35976223 | Msa0356590:intron | 35.0% |
| ! | ACTAAAAAGTTGGTTAGAGG+TGG | + | chr3_1:35976207-35976226 | Msa0356590:intron | 35.0% |
| TGACATGATTTCTCATATGG+AGG | - | chr3_1:35977217-35977236 | None:intergenic | 35.0% | |
| GTTTATCCTATCATCCCTTT+AGG | + | chr3_1:35977304-35977323 | Msa0356590:intron | 35.0% | |
| TTAAAGCCTAAAGGGATGAT+AGG | - | chr3_1:35977313-35977332 | None:intergenic | 35.0% | |
| TGTGTGTGTTAAAGCCTAAA+GGG | - | chr3_1:35977321-35977340 | None:intergenic | 35.0% | |
| ATGTGTGTGTTAAAGCCTAA+AGG | - | chr3_1:35977322-35977341 | None:intergenic | 35.0% | |
| AACTTTCATATGTTCGTAGG+TGG | + | chr3_1:35977462-35977481 | Msa0356590:intron | 35.0% | |
| !! | CTGTCGAAAATAGTTTGTTG+TGG | - | chr3_1:35977593-35977612 | None:intergenic | 35.0% |
| TTCGACAGTCTACATGATAA+TGG | + | chr3_1:35977605-35977624 | Msa0356590:CDS | 35.0% | |
| !! | CATGATAATGGATTCGACTT+TGG | + | chr3_1:35977617-35977636 | Msa0356590:CDS | 35.0% |
| ! | ACAATGTTGCTGGGATATTT+TGG | - | chr3_1:35977652-35977671 | None:intergenic | 35.0% |
| TCCTATAGAACAATGTTGCT+GGG | - | chr3_1:35977661-35977680 | None:intergenic | 35.0% | |
| TTCCTATAGAACAATGTTGC+TGG | - | chr3_1:35977662-35977681 | None:intergenic | 35.0% | |
| ! | ACGTCGTATAGGTGAAATTT+TGG | - | chr3_1:35977707-35977726 | None:intergenic | 35.0% |
| ! | ATTTGGTAACTTTCCTTCCT+TGG | - | chr3_1:35977747-35977766 | None:intergenic | 35.0% |
| GTTACCAAATTATGTTGTGG+TGG | + | chr3_1:35977757-35977776 | Msa0356590:CDS | 35.0% | |
| TCAAGGACAAATGTTCGTTA+AGG | + | chr3_1:35977844-35977863 | Msa0356590:CDS | 35.0% | |
| TTGATTACATACGATGAGCA+TGG | + | chr3_1:35977917-35977936 | Msa0356590:CDS | 35.0% | |
| !! | TTTTAATAGGTTGGGAGTGA+GGG | + | chr3_1:35978024-35978043 | Msa0356590:CDS | 35.0% |
| AATCCAAGGTGATATAGCAA+TGG | - | chr3_1:35978056-35978075 | None:intergenic | 35.0% | |
| ATGCAAACAGAAAGACTTAC+CGG | - | chr3_1:35978089-35978108 | None:intergenic | 35.0% | |
| AGGCAAAACTGCATAATGTA+AGG | + | chr3_1:35978169-35978188 | Msa0356590:intron | 35.0% | |
| ! | CATTTATGTTGATGGAGTGT+TGG | - | chr3_1:35978407-35978426 | None:intergenic | 35.0% |
| GATCTTCATCATACAAAGCT+AGG | - | chr3_1:35978576-35978595 | None:intergenic | 35.0% | |
| GCTTTGTATGATGAAGATCT+AGG | + | chr3_1:35978577-35978596 | Msa0356590:intron | 35.0% | |
| ! | GACTCAGCCAATTTTATGAT+GGG | - | chr3_1:35978875-35978894 | None:intergenic | 35.0% |
| !! | AGTGGGACCATATACTTTTT+GGG | + | chr3_1:35979455-35979474 | Msa0356590:intron | 35.0% |
| GAATACTGGCAACATATCAA+TGG | - | chr3_1:35979545-35979564 | None:intergenic | 35.0% | |
| TGATATGTTGCCAGTATTCT+TGG | + | chr3_1:35979546-35979565 | Msa0356590:intron | 35.0% | |
| GATATGTTGCCAGTATTCTT+GGG | + | chr3_1:35979547-35979566 | Msa0356590:intron | 35.0% | |
| TGTTACGCAAGACTAATTGT+GGG | + | chr3_1:35979609-35979628 | Msa0356590:intron | 35.0% | |
| ATTGTGGGTAGCAATAATTG+AGG | + | chr3_1:35979624-35979643 | Msa0356590:intron | 35.0% | |
| AATGCGATACAAATGTCTCT+TGG | + | chr3_1:35979739-35979758 | Msa0356590:intron | 35.0% | |
| ! | TCTAGGACAAAACCAACTAA+TGG | - | chr3_1:35979802-35979821 | None:intergenic | 35.0% |
| ! | GGACAATTTTCTACTTGATG+GGG | + | chr3_1:35979832-35979851 | Msa0356590:intron | 35.0% |
| AAGATTCTTGTCCCAAATCT+CGG | - | chr3_1:35979959-35979978 | None:intergenic | 35.0% | |
| CCTATTAAAAACCCTAAGTC+CGG | - | chr3_1:35980001-35980020 | None:intergenic | 35.0% | |
| ! | CGGACTTAGGGTTTTTAATA+GGG | + | chr3_1:35979999-35980018 | Msa0356590:intron | 35.0% |
| TTTGCGTAGAAACAAAGTGT+AGG | - | chr3_1:35980131-35980150 | None:intergenic | 35.0% | |
| GTTATTGATGCAGTTGTTCA+TGG | + | chr3_1:35980494-35980513 | Msa0356590:intron | 35.0% | |
| TCATATTCTGATGTAGGAGT+TGG | - | chr3_1:35980533-35980552 | None:intergenic | 35.0% | |
| GAGTGTTCATATTCTGATGT+AGG | - | chr3_1:35980539-35980558 | None:intergenic | 35.0% | |
| TTCTTACCAAGAGAGATGAA+TGG | + | chr3_1:35980603-35980622 | Msa0356590:CDS | 35.0% | |
| TCTTACCAAGAGAGATGAAT+GGG | + | chr3_1:35980604-35980623 | Msa0356590:CDS | 35.0% | |
| !! | TTGAAGGTATTGTCCAAACA+AGG | + | chr3_1:35980636-35980655 | Msa0356590:CDS | 35.0% |
| TAGAAGTGAACAACTAACCT+GGG | - | chr3_1:35980682-35980701 | None:intergenic | 35.0% | |
| ATAGAAGTGAACAACTAACC+TGG | - | chr3_1:35980683-35980702 | None:intergenic | 35.0% | |
| !!! | TCAAAATTTTATCGGTGTCG+AGG | - | chr3_1:35980754-35980773 | None:intergenic | 35.0% |
| ! | TCTAAAGTCAGACACATGAT+TGG | - | chr3_1:35980978-35980997 | None:intergenic | 35.0% |
| !! | TCTTCGCTGATTCTTGATAT+CGG | + | chr3_1:35981129-35981148 | Msa0356590:intron | 35.0% |
| TTTCTTAACTTTATCGGGGT+TGG | - | chr3_1:35981176-35981195 | None:intergenic | 35.0% | |
| AACCCCGATAAAGTTAAGAA+AGG | + | chr3_1:35981175-35981194 | Msa0356590:CDS | 35.0% | |
| ACCCCGATAAAGTTAAGAAA+GGG | + | chr3_1:35981176-35981195 | Msa0356590:CDS | 35.0% | |
| TCCCTTTCTTAACTTTATCG+GGG | - | chr3_1:35981180-35981199 | None:intergenic | 35.0% | |
| CTCCCTTTCTTAACTTTATC+GGG | - | chr3_1:35981181-35981200 | None:intergenic | 35.0% | |
| GATAAAGTTAAGAAAGGGAG+AGG | + | chr3_1:35981181-35981200 | Msa0356590:CDS | 35.0% | |
| AAAGCTAAGTGAATTTCAGC+AGG | + | chr3_1:35981217-35981236 | Msa0356590:CDS | 35.0% | |
| ATGTCTTTCCCTATGGTATT+TGG | - | chr3_1:35981296-35981315 | None:intergenic | 35.0% | |
| AAAGACATGAGTGTTAAGCA+AGG | + | chr3_1:35981308-35981327 | Msa0356590:CDS | 35.0% | |
| AGGTCGTTATGCAAAGAAAA+TGG | + | chr3_1:35981373-35981392 | Msa0356590:CDS | 35.0% | |
| GGTCGTTATGCAAAGAAAAT+GGG | + | chr3_1:35981374-35981393 | Msa0356590:CDS | 35.0% | |
| ! | TGTTGATGGAAGAAAAGGTG+AGG | - | chr3_1:35974523-35974542 | None:intergenic | 40.0% |
| !!! | AGTTTTTCGGGTACCCATTT+TGG | - | chr3_1:35974574-35974593 | None:intergenic | 40.0% |
| CAATTGCATGGGAATTGTGA+AGG | - | chr3_1:35974650-35974669 | None:intergenic | 40.0% | |
| CGGTTACACCGTTTATGTTT+GGG | - | chr3_1:35974755-35974774 | None:intergenic | 40.0% | |
| CCAAACATAAACGGTGTAAC+CGG | + | chr3_1:35974753-35974772 | Msa0356590:CDS | 40.0% | |
| CAAACATAAACGGTGTAACC+GGG | + | chr3_1:35974754-35974773 | Msa0356590:CDS | 40.0% | |
| GTCACTCGTTTCAAGCAATA+AGG | + | chr3_1:35974865-35974884 | Msa0356590:CDS | 40.0% | |
| AAGGGAACAAATATTCGGGT+CGG | + | chr3_1:35974884-35974903 | Msa0356590:CDS | 40.0% | |
| TTAACGTTGCTGAATGTCCA+AGG | - | chr3_1:35975228-35975247 | None:intergenic | 40.0% | |
| ! | CGAGCATTGTGGGATTTAAA+TGG | - | chr3_1:35975274-35975293 | None:intergenic | 40.0% |
| ! | GATTAATCTCTCGAGCATTG+TGG | - | chr3_1:35975285-35975304 | None:intergenic | 40.0% |
| !!! | CGTGGCAACAGTATCTTTTT+TGG | - | chr3_1:35975583-35975602 | None:intergenic | 40.0% |
| AGTTCACCAGAAAAGATGAG+TGG | + | chr3_1:35976183-35976202 | Msa0356590:intron | 40.0% | |
| TATACATGCCGGCACAAATT+AGG | + | chr3_1:35977177-35977196 | Msa0356590:intron | 40.0% | |
| GCTTTAACACACACATTCAC+AGG | + | chr3_1:35977326-35977345 | Msa0356590:intron | 40.0% | |
| TCCCAGCAACATTGTTCTAT+AGG | + | chr3_1:35977657-35977676 | Msa0356590:CDS | 40.0% | |
| GCTTAAATGTCACGTCGTAT+AGG | - | chr3_1:35977718-35977737 | None:intergenic | 40.0% | |
| TGCTCCACCACAACATAATT+TGG | - | chr3_1:35977764-35977783 | None:intergenic | 40.0% | |
| AGGACAAATGTTCGTTAAGG+AGG | + | chr3_1:35977847-35977866 | Msa0356590:CDS | 40.0% | |
| ATTACATACGATGAGCATGG+AGG | + | chr3_1:35977920-35977939 | Msa0356590:CDS | 40.0% | |
| TTACATACGATGAGCATGGA+GGG | + | chr3_1:35977921-35977940 | Msa0356590:CDS | 40.0% | |
| !! | CTTTTAATAGGTTGGGAGTG+AGG | + | chr3_1:35978023-35978042 | Msa0356590:CDS | 40.0% |
| CAAGGTGATATAGCAATGGT+AGG | - | chr3_1:35978052-35978071 | None:intergenic | 40.0% | |
| CTACCATTGCTATATCACCT+TGG | + | chr3_1:35978050-35978069 | Msa0356590:CDS | 40.0% | |
| ! | CGACTCAGCCAATTTTATGA+TGG | - | chr3_1:35978876-35978895 | None:intergenic | 40.0% |
| CACTCACCATTACACCAAAT+TGG | + | chr3_1:35979295-35979314 | Msa0356590:intron | 40.0% | |
| !!! | TTCTTTTGGCTTCACACGTA+GGG | + | chr3_1:35979325-35979344 | Msa0356590:intron | 40.0% |
| ! | GAGTGGGACCATATACTTTT+TGG | + | chr3_1:35979454-35979473 | Msa0356590:intron | 40.0% |
| TGAAAATGTTGTCATGCACC+AGG | + | chr3_1:35979509-35979528 | Msa0356590:intron | 40.0% | |
| ACTGGCAACATATCAATGGT+CGG | - | chr3_1:35979541-35979560 | None:intergenic | 40.0% | |
| GTGTTACGCAAGACTAATTG+TGG | + | chr3_1:35979608-35979627 | Msa0356590:intron | 40.0% | |
| GTCTCTTGGATTATTTGGGT+TGG | + | chr3_1:35979753-35979772 | Msa0356590:intron | 40.0% | |
| TACTTGATGGGGAAACTTCT+CGG | + | chr3_1:35979843-35979862 | Msa0356590:intron | 40.0% | |
| TACTTGAACTCACCGAGATT+TGG | + | chr3_1:35979944-35979963 | Msa0356590:intron | 40.0% | |
| ACTTGAACTCACCGAGATTT+GGG | + | chr3_1:35979945-35979964 | Msa0356590:intron | 40.0% | |
| ! | CCGGACTTAGGGTTTTTAAT+AGG | + | chr3_1:35979998-35980017 | Msa0356590:intron | 40.0% |
| GAGTAGAATTGTACGAGTGA+TGG | + | chr3_1:35980034-35980053 | Msa0356590:intron | 40.0% | |
| !! | TCCATGATGGGTGATATCTA+GGG | - | chr3_1:35980095-35980114 | None:intergenic | 40.0% |
| !! | ATCCATGATGGGTGATATCT+AGG | - | chr3_1:35980096-35980115 | None:intergenic | 40.0% |
| ! | CTTTTTAACCGTTGCTGCAA+TGG | - | chr3_1:35980564-35980583 | None:intergenic | 40.0% |
| ! | CATGTGTCTGACTTTAGAAG+TGG | + | chr3_1:35980980-35980999 | Msa0356590:intron | 40.0% |
| AACACTCATGTCTTTCCCTA+TGG | - | chr3_1:35981303-35981322 | None:intergenic | 40.0% | |
| ACATGGATGAAGCAGTTAAG+AGG | + | chr3_1:35981339-35981358 | Msa0356590:CDS | 40.0% | |
| !! | GTTAAGAGGTTCTTTGAAGC+AGG | + | chr3_1:35981353-35981372 | Msa0356590:CDS | 40.0% |
| GACGATCTTGTAGTCAAAGA+AGG | - | chr3_1:35981431-35981450 | None:intergenic | 40.0% | |
| !! | TCTTTGTTTCTGAGGTGCAA+TGG | + | chr3_1:35981649-35981668 | Msa0356590:three_prime_UTR | 40.0% |
| CAAGCATGTGGTCGAATGAA+CGG | - | chr3_1:35974713-35974732 | None:intergenic | 45.0% | |
| TCTTCATCCAACCAAGCATG+TGG | - | chr3_1:35974725-35974744 | None:intergenic | 45.0% | |
| CCGGTTACACCGTTTATGTT+TGG | - | chr3_1:35974756-35974775 | None:intergenic | 45.0% | |
| CAAGAACGAAGCGAAGTATG+TGG | + | chr3_1:35974830-35974849 | Msa0356590:CDS | 45.0% | |
| GAAGTATGTGGATCCTGATC+CGG | + | chr3_1:35974842-35974861 | Msa0356590:CDS | 45.0% | |
| AAGTATGTGGATCCTGATCC+GGG | + | chr3_1:35974843-35974862 | Msa0356590:CDS | 45.0% | |
| ATTGCTTGAAACGAGTGACC+CGG | - | chr3_1:35974864-35974883 | None:intergenic | 45.0% | |
| CTTGTGTTCGAATTCAGCCT+TGG | + | chr3_1:35975208-35975227 | Msa0356590:intron | 45.0% | |
| TTAATCTATGCAGTTGCGCG+CGG | + | chr3_1:35975299-35975318 | Msa0356590:intron | 45.0% | |
| CACGTAGAGTCGATTAGGTT+GGG | - | chr3_1:35977510-35977529 | None:intergenic | 45.0% | |
| ! | TAATCGACTCTACGTGCACT+CGG | + | chr3_1:35977514-35977533 | Msa0356590:CDS | 45.0% |
| GACATTTAAGCCTCATGCCA+AGG | + | chr3_1:35977727-35977746 | Msa0356590:CDS | 45.0% | |
| TTTAAGCCTCATGCCAAGGA+AGG | + | chr3_1:35977731-35977750 | Msa0356590:CDS | 45.0% | |
| AACTTTCCTTCCTTGGCATG+AGG | - | chr3_1:35977740-35977759 | None:intergenic | 45.0% | |
| ! | ATTATGTTGTGGTGGAGCAG+CGG | + | chr3_1:35977765-35977784 | Msa0356590:CDS | 45.0% |
| GGCAGGTAACAACTTAGTGT+CGG | - | chr3_1:35977795-35977814 | None:intergenic | 45.0% | |
| CTTGATACACATCATGCGAC+GGG | - | chr3_1:35977829-35977848 | None:intergenic | 45.0% | |
| CCTTGATACACATCATGCGA+CGG | - | chr3_1:35977830-35977849 | None:intergenic | 45.0% | |
| ATAGGGTTTCGTTCCACTGT+GGG | - | chr3_1:35977895-35977914 | None:intergenic | 45.0% | |
| AATAGGGTTTCGTTCCACTG+TGG | - | chr3_1:35977896-35977915 | None:intergenic | 45.0% | |
| !!! | CTTCTTTTGGCTTCACACGT+AGG | + | chr3_1:35979324-35979343 | Msa0356590:intron | 45.0% |
| ! | ATCAATGGTCGGTTTCTTCC+TGG | - | chr3_1:35979530-35979549 | None:intergenic | 45.0% |
| GCTGATATGCCCAAGAATAC+TGG | - | chr3_1:35979559-35979578 | None:intergenic | 45.0% | |
| !! | CCTTTGCTTTTCACATGCTC+CGG | + | chr3_1:35979979-35979998 | Msa0356590:intron | 45.0% |
| ! | TTTTCACATGCTCCGGACTT+AGG | + | chr3_1:35979986-35980005 | Msa0356590:intron | 45.0% |
| TTTCACATGCTCCGGACTTA+GGG | + | chr3_1:35979987-35980006 | Msa0356590:intron | 45.0% | |
| ACCCTAGATATCACCCATCA+TGG | + | chr3_1:35980091-35980110 | Msa0356590:intron | 45.0% | |
| TATCACCCATCATGGATCCT+AGG | + | chr3_1:35980099-35980118 | Msa0356590:intron | 45.0% | |
| CCAAACCTAGGATCCATGAT+GGG | - | chr3_1:35980107-35980126 | None:intergenic | 45.0% | |
| TCCAAACCTAGGATCCATGA+TGG | - | chr3_1:35980108-35980127 | None:intergenic | 45.0% | |
| CAAAGTGTAGGTCCAAACCT+AGG | - | chr3_1:35980119-35980138 | None:intergenic | 45.0% | |
| ACACTCATCCATTGCAGCAA+CGG | + | chr3_1:35980553-35980572 | Msa0356590:CDS | 45.0% | |
| !! | GAATGGGCTGGAACATTTGA+AGG | + | chr3_1:35980620-35980639 | Msa0356590:CDS | 45.0% |
| TAACCTGGGCAATCAGTTCT+GGG | - | chr3_1:35980668-35980687 | None:intergenic | 45.0% | |
| ATAAAGCACGGACCCATACA+CGG | + | chr3_1:35980701-35980720 | Msa0356590:intron | 45.0% | |
| ATCTGTGTCAGTGTCGTATC+CGG | - | chr3_1:35980730-35980749 | None:intergenic | 45.0% | |
| ! | CTTTTAGCACTGCTGCAAGT+TGG | - | chr3_1:35981250-35981269 | None:intergenic | 45.0% |
| CAACTTGCAGCAGTGCTAAA+AGG | + | chr3_1:35981248-35981267 | Msa0356590:CDS | 45.0% | |
| !! | TAAAAAAAATAATAATCAAA+AGG | - | chr3_1:35975386-35975405 | None:intergenic | 5.0% |
| !!! | TGATTTAATTTTAATATATT+TGG | - | chr3_1:35976276-35976295 | None:intergenic | 5.0% |
| !! | AATTAAAATTAAAAAATTGA+GGG | - | chr3_1:35976864-35976883 | None:intergenic | 5.0% |
| !! | TAATTAAAATTAAAAAATTG+AGG | - | chr3_1:35976865-35976884 | None:intergenic | 5.0% |
| !!! | TGTATATTAATTTTTTTTTT+TGG | - | chr3_1:35977117-35977136 | None:intergenic | 5.0% |
| !! | ATAAAAAAATTATTGAAAAT+AGG | + | chr3_1:35981545-35981564 | Msa0356590:three_prime_UTR | 5.0% |
| CGTTCATTCGACCACATGCT+TGG | + | chr3_1:35974711-35974730 | Msa0356590:CDS | 50.0% | |
| CATTCGACCACATGCTTGGT+TGG | + | chr3_1:35974715-35974734 | Msa0356590:CDS | 50.0% | |
| GGAACAAATATTCGGGTCGG+AGG | + | chr3_1:35974887-35974906 | Msa0356590:CDS | 50.0% | |
| CAAATCCATTCATCGGAGCC+GGG | - | chr3_1:35974926-35974945 | None:intergenic | 50.0% | |
| GCAAATCCATTCATCGGAGC+CGG | - | chr3_1:35974927-35974946 | None:intergenic | 50.0% | |
| TATGTGAGGCTGTGTGAACG+TGG | - | chr3_1:35975601-35975620 | None:intergenic | 50.0% | |
| !! | GTAGAGTCGATTAGGTTGGG+TGG | - | chr3_1:35977507-35977526 | None:intergenic | 50.0% |
| GCACGTAGAGTCGATTAGGT+TGG | - | chr3_1:35977511-35977530 | None:intergenic | 50.0% | |
| GAGTGCACGTAGAGTCGATT+AGG | - | chr3_1:35977515-35977534 | None:intergenic | 50.0% | |
| ATGCGACGGGTGATCATCAT+TGG | - | chr3_1:35977816-35977835 | None:intergenic | 50.0% | |
| CCGTCGCATGATGTGTATCA+AGG | + | chr3_1:35977827-35977846 | Msa0356590:CDS | 50.0% | |
| CAAGCCCTGATGGGATTGTA+GGG | + | chr3_1:35977981-35978000 | Msa0356590:CDS | 50.0% | |
| ! | CCTTGGATTGAAAAGGGCAC+CGG | + | chr3_1:35978067-35978086 | Msa0356590:CDS | 50.0% |
| ! | CGCATTGACACTCTCAGCTT+CGG | - | chr3_1:35979725-35979744 | None:intergenic | 50.0% |
| CCGGAGCATGTGAAAAGCAA+AGG | - | chr3_1:35979982-35980001 | None:intergenic | 50.0% | |
| CCCATCATGGATCCTAGGTT+TGG | + | chr3_1:35980104-35980123 | Msa0356590:intron | 50.0% | |
| GCAGTTGTTCATGGGCCAAA+CGG | + | chr3_1:35980503-35980522 | Msa0356590:intron | 50.0% | |
| CAGTTGTTCATGGGCCAAAC+GGG | + | chr3_1:35980504-35980523 | Msa0356590:intron | 50.0% | |
| ACCAAGAGAGATGAATGGGC+TGG | + | chr3_1:35980608-35980627 | Msa0356590:CDS | 50.0% | |
| TCCAGCCCATTCATCTCTCT+TGG | - | chr3_1:35980612-35980631 | None:intergenic | 50.0% | |
| TTCTGGGCTCTGTCCTTGTT+TGG | - | chr3_1:35980652-35980671 | None:intergenic | 50.0% | |
| CTAACCTGGGCAATCAGTTC+TGG | - | chr3_1:35980669-35980688 | None:intergenic | 50.0% | |
| !! | CACAAGTGTCGGTATCGTGT+CGG | + | chr3_1:35980798-35980817 | Msa0356590:intron | 50.0% |
| GTGTCAGACACGACATGTGT+CGG | + | chr3_1:35980820-35980839 | Msa0356590:intron | 50.0% | |
| TGAAACGAGTGACCCGGATC+AGG | - | chr3_1:35974858-35974877 | None:intergenic | 55.0% | |
| !! | CGATTAGGTTGGGTGGAAGC+TGG | - | chr3_1:35977500-35977519 | None:intergenic | 55.0% |
| TACGTGCACTCGGCAACATC+CGG | + | chr3_1:35977524-35977543 | Msa0356590:CDS | 55.0% | |
| AAGCAGGGATGCCACGTTAC+TGG | - | chr3_1:35977558-35977577 | None:intergenic | 55.0% | |
| GACGGGTGATCATCATTGGC+AGG | - | chr3_1:35977812-35977831 | None:intergenic | 55.0% | |
| ATGTTGCTACGCCTGTGCGT+GGG | + | chr3_1:35977954-35977973 | Msa0356590:CDS | 55.0% | |
| CCTACAATCCCATCAGGGCT+TGG | - | chr3_1:35977983-35978002 | None:intergenic | 55.0% | |
| CCAAGCCCTGATGGGATTGT+AGG | + | chr3_1:35977980-35977999 | Msa0356590:CDS | 55.0% | |
| CTGGCCCTACAATCCCATCA+GGG | - | chr3_1:35977988-35978007 | None:intergenic | 55.0% | |
| TCTGGCCCTACAATCCCATC+AGG | - | chr3_1:35977989-35978008 | None:intergenic | 55.0% | |
| ! | CCGGTGCCCTTTTCAATCCA+AGG | - | chr3_1:35978070-35978089 | None:intergenic | 55.0% |
| !! | GTAGGAGTTGGTGACCCGTT+TGG | - | chr3_1:35980521-35980540 | None:intergenic | 55.0% |
| CGTATCCGGTGTCCGTGTAT+GGG | - | chr3_1:35980716-35980735 | None:intergenic | 55.0% | |
| TCGTATCCGGTGTCCGTGTA+TGG | - | chr3_1:35980717-35980736 | None:intergenic | 55.0% | |
| ACACGACATGTGTCGGACAC+TGG | + | chr3_1:35980827-35980846 | Msa0356590:intron | 55.0% | |
| CACGACATGTGTCGGACACT+GGG | + | chr3_1:35980828-35980847 | Msa0356590:intron | 55.0% | |
| GGAGGACACGTCACTTGACC+CGG | + | chr3_1:35974905-35974924 | Msa0356590:CDS | 60.0% | |
| CTTGACCCGGCTCCGATGAA+TGG | + | chr3_1:35974918-35974937 | Msa0356590:CDS | 60.0% | |
| ATCTATGCAGTTGCGCGCGG+AGG | + | chr3_1:35975302-35975321 | Msa0356590:intron | 60.0% | |
| AGTTGCGCGCGGAGGATAAC+CGG | + | chr3_1:35975310-35975329 | Msa0356590:intron | 60.0% | |
| AGGTTGGGTGGAAGCTGGCA+CGG | - | chr3_1:35977495-35977514 | None:intergenic | 60.0% | |
| CAGGGATGCCACGTTACTGG+TGG | - | chr3_1:35977555-35977574 | None:intergenic | 60.0% | |
| GTGGCATCCCTGCTTGCGAA+GGG | + | chr3_1:35977563-35977582 | Msa0356590:CDS | 60.0% | |
| TGGGTAGCCCTTCGCAAGCA+GGG | - | chr3_1:35977573-35977592 | None:intergenic | 60.0% | |
| ! | AGGAGGTGTACGAGACGCTG+AGG | + | chr3_1:35977864-35977883 | Msa0356590:CDS | 60.0% |
| ! | GGAGGTGTACGAGACGCTGA+GGG | + | chr3_1:35977865-35977884 | Msa0356590:CDS | 60.0% |
| CATGTTGCTACGCCTGTGCG+TGG | + | chr3_1:35977953-35977972 | Msa0356590:CDS | 60.0% | |
| TGTTGCTACGCCTGTGCGTG+GGG | + | chr3_1:35977955-35977974 | Msa0356590:CDS | 60.0% | |
| GAGCCCAGAACTGATTGCCC+AGG | + | chr3_1:35980662-35980681 | Msa0356590:CDS | 60.0% | |
| ACGGACCCATACACGGACAC+CGG | + | chr3_1:35980708-35980727 | Msa0356590:intron | 60.0% | |
| GTGCACTCGGCAACATCCGG+CGG | + | chr3_1:35977527-35977546 | Msa0356590:CDS | 65.0% | |
| CGTGGCATCCCTGCTTGCGA+AGG | + | chr3_1:35977562-35977581 | Msa0356590:CDS | 65.0% | |
| GTGGGTAGCCCTTCGCAAGC+AGG | - | chr3_1:35977574-35977593 | None:intergenic | 65.0% | |
| ! | GTGGGGTGCCAAGCCCTGAT+GGG | + | chr3_1:35977972-35977991 | Msa0356590:CDS | 65.0% |
| ! | CACGTTACTGGTGGCGCCGC+CGG | - | chr3_1:35977546-35977565 | None:intergenic | 70.0% |
| ! | CGTGGGGTGCCAAGCCCTGA+TGG | + | chr3_1:35977971-35977990 | Msa0356590:CDS | 70.0% |
| CGGCGGCGCCACCAGTAACG+TGG | + | chr3_1:35977544-35977563 | Msa0356590:CDS | 75.0% | |
| CGCTGAGGGCGAGCCCACAG+TGG | + | chr3_1:35977879-35977898 | Msa0356590:CDS | 75.0% | |
| GGGCTTGGCACCCCACGCAC+AGG | - | chr3_1:35977968-35977987 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 35974453 | 35981784 | 35974453 | ID=Msa0356590;Name=Msa0356590 |
| chr3_1 | mRNA | 35974453 | 35981784 | 35974453 | ID=Msa0356590-mRNA-1;Parent=Msa0356590;Name=Msa0356590-mRNA-1;_AED=0.01;_eAED=0.01;_QI=123|1|1|1|1|1|4|309|528 |
| chr3_1 | exon | 35974453 | 35975066 | 35974453 | ID=Msa0356590-mRNA-1:exon:6605;Parent=Msa0356590-mRNA-1 |
| chr3_1 | exon | 35977481 | 35978088 | 35977481 | ID=Msa0356590-mRNA-1:exon:6606;Parent=Msa0356590-mRNA-1 |
| chr3_1 | exon | 35980507 | 35980683 | 35980507 | ID=Msa0356590-mRNA-1:exon:6607;Parent=Msa0356590-mRNA-1 |
| chr3_1 | exon | 35981165 | 35981784 | 35981165 | ID=Msa0356590-mRNA-1:exon:6608;Parent=Msa0356590-mRNA-1 |
| chr3_1 | five_prime_UTR | 35974453 | 35974575 | 35974453 | ID=Msa0356590-mRNA-1:five_prime_utr;Parent=Msa0356590-mRNA-1 |
| chr3_1 | CDS | 35974576 | 35975066 | 35974576 | ID=Msa0356590-mRNA-1:cds;Parent=Msa0356590-mRNA-1 |
| chr3_1 | CDS | 35977481 | 35978088 | 35977481 | ID=Msa0356590-mRNA-1:cds;Parent=Msa0356590-mRNA-1 |
| chr3_1 | CDS | 35980507 | 35980683 | 35980507 | ID=Msa0356590-mRNA-1:cds;Parent=Msa0356590-mRNA-1 |
| chr3_1 | CDS | 35981165 | 35981475 | 35981165 | ID=Msa0356590-mRNA-1:cds;Parent=Msa0356590-mRNA-1 |
| chr3_1 | three_prime_UTR | 35981476 | 35981784 | 35981476 | ID=Msa0356590-mRNA-1:three_prime_utr;Parent=Msa0356590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
