AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0358340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0358340 MtrunA17_Chr3g0116371 94.917 1023 32 3 1 1015 1 1011 0.0 1915
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0358340 AT3G48470.2 55.383 1031 411 12 2 1013 7 1007 0.0 1117
Msa0358340 AT3G48470.1 52.902 1051 423 15 2 1013 7 1024 0.0 1049

Find 237 sgRNAs with CRISPR-Local

Find 609 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAAATTCCCTACTTAAA+TGG 0.096501 3_1:-43130032 Msa0358340:CDS
ATTAAATTTCGAATGAATTT+AGG 0.151786 3_1:+43129798 None:intergenic
ACTAATGCCTTTCTCTTTAC+TGG 0.186117 3_1:+43132261 None:intergenic
AGTGGCGCACTATTGTTTAT+TGG 0.241080 3_1:-43136848 Msa0358340:CDS
GTGGCGCACTATTGTTTATT+GGG 0.266681 3_1:-43136847 Msa0358340:CDS
CTACGTATCATCTGCTTTAC+TGG 0.278756 3_1:-43130599 Msa0358340:CDS
CAAATGATGTTCAAGCATAT+TGG 0.283575 3_1:-43135098 Msa0358340:CDS
GCAGTCAGTGTCCGTTTCTT+GGG 0.286804 3_1:+43132364 None:intergenic
GAGACAATAGATTGGGCATT+TGG 0.296728 3_1:-43132397 Msa0358340:CDS
AGCAGTCAGTGTCCGTTTCT+TGG 0.298684 3_1:+43132363 None:intergenic
GGACTCCTGGAGCTAGTTCC+TGG 0.305396 3_1:-43131290 Msa0358340:CDS
GATTGCCCTGGATGAACTTC+TGG 0.308926 3_1:+43130088 None:intergenic
TTCCCTTTCTTGACCTGATT+AGG 0.311864 3_1:+43131198 None:intergenic
CCATAGAACTATCAAGCTTC+AGG 0.312633 3_1:-43135058 Msa0358340:CDS
CACCAAACTCTCTTGCTATC+TGG 0.314566 3_1:+43137254 None:intergenic
CAAACTGAAGGATCCATTTC+AGG 0.319075 3_1:+43134122 None:intergenic
CTTCTTCAAGGGAGAGTACT+TGG 0.320722 3_1:+43136924 None:intergenic
TGTGCTGGCTCCTTCCCTTC+TGG 0.322250 3_1:-43130947 Msa0358340:CDS
ACAATTTCGAATTCATATTC+TGG 0.324396 3_1:+43129962 None:intergenic
TCTTACCAGAGCTCTTATTC+AGG 0.326228 3_1:-43131604 Msa0358340:CDS
GCCTTTCTCTTTACTGGAAA+GGG 0.329062 3_1:+43132267 None:intergenic
GGAAACTCATTTATATGCTT+GGG 0.333130 3_1:-43131008 Msa0358340:CDS
ATCCATTTCAGGCAACTAAC+AGG 0.334890 3_1:+43134133 None:intergenic
GGAGCCAGCACAGACGCTTC+TGG 0.336786 3_1:+43130958 None:intergenic
CAAAACCAGAAGCCATGTTT+TGG 0.342599 3_1:-43135206 Msa0358340:CDS
CACCGAGGTGTTACAGATAC+TGG 0.344339 3_1:-43137559 Msa0358340:CDS
AGTTCCTGGAAAGAGATTTC+AGG 0.347254 3_1:-43131276 Msa0358340:CDS
TGTGCCATTCTAGATATATC+TGG 0.347745 3_1:+43137190 None:intergenic
CTCCAGATAGCAAGAGAGTT+TGG 0.350200 3_1:-43137256 Msa0358340:CDS
TGGTTCTTGCCTAGCAGCTC+AGG 0.350358 3_1:-43131312 Msa0358340:CDS
GACAATGTCTAAGGAGGAAT+TGG 0.351718 3_1:-43133629 Msa0358340:CDS
TCACTTCTCTTTCTTCTTCA+AGG 0.352624 3_1:+43136912 None:intergenic
CTCAACCAAAACATGGCTTC+TGG 0.353727 3_1:+43135201 None:intergenic
ATACAAGCTTGTTGCTCAAT+AGG 0.357170 3_1:+43133983 None:intergenic
CGCGAACCTGAGAGAAGATT+AGG 0.358103 3_1:+43138228 None:intergenic
AAAAGAACCTGTATCGCGTT+TGG 0.359209 3_1:+43131362 None:intergenic
CCTGAAGCTTGATAGTTCTA+TGG 0.360848 3_1:+43135058 None:intergenic
GGGAAACTCATTTATATGCT+TGG 0.362237 3_1:-43131009 Msa0358340:CDS
AGTACCTGAAATCTCTTTCC+AGG 0.365122 3_1:+43131272 None:intergenic
CTTGCTAGGTTCTTGTTACT+TGG 0.365741 3_1:-43137755 Msa0358340:intron
TTAAAATTCCCTACTTAAAT+GGG 0.367322 3_1:-43130031 Msa0358340:CDS
CTGTGCCTGCTTGAAAATAA+TGG 0.372710 3_1:-43137283 Msa0358340:CDS
TCCCTGTTAGTTGCCTGAAA+TGG 0.377573 3_1:-43134135 Msa0358340:CDS
AACAATGGAGAAGAAAGAAT+TGG 0.378710 3_1:-43138367 Msa0358340:exon
GATAGAAACCTCAGATGAAA+TGG 0.380700 3_1:-43136876 Msa0358340:CDS
ATCTGTCGCCGTGGTTCTGC+TGG 0.382634 3_1:-43136809 Msa0358340:intron
CTGCAGATGTTGCCTCCAAC+TGG 0.383090 3_1:-43137647 Msa0358340:intron
CCTAGCAGCTCAGGGACTCC+TGG 0.383180 3_1:-43131303 Msa0358340:CDS
ATGTGCATGCAGCTGCAAAA+AGG 0.386063 3_1:+43130641 None:intergenic
AAATGATGTTCAAGCATATT+GGG 0.386356 3_1:-43135097 Msa0358340:CDS
CGTTGACTAATATCTACATT+AGG 0.386849 3_1:+43131450 None:intergenic
TGCTGTGATATAGCTTTAGA+AGG 0.386924 3_1:-43131576 Msa0358340:CDS
CAATTTCGAATTCATATTCT+GGG 0.387099 3_1:+43129963 None:intergenic
AGGTATCTAGATTTAACATT+TGG 0.387696 3_1:-43129847 Msa0358340:three_prime_UTR
AGTTAGTACCTCGAGTTCTA+AGG 0.387887 3_1:-43135287 Msa0358340:CDS
AAAGAACCTGTATCGCGTTT+GGG 0.393144 3_1:+43131363 None:intergenic
CCGCCTAGCACGTCTATATC+AGG 0.398720 3_1:-43134085 Msa0358340:CDS
TAGTCAACGAATAATGATAC+TGG 0.402960 3_1:-43131436 Msa0358340:CDS
TCACTAATTCCCATTTAAGT+AGG 0.404747 3_1:+43130022 None:intergenic
GCCTTGAATGGATTCGCATA+TGG 0.405438 3_1:-43130552 Msa0358340:CDS
ATCAGAGCCCTCCTCTGAAC+TGG 0.408472 3_1:+43132291 None:intergenic
TGTGATTGTTTCAGGTAGGT+TGG 0.408693 3_1:-43132527 Msa0358340:intron
AATGGCTAGTAATATTGCTT+TGG 0.408839 3_1:-43132479 Msa0358340:CDS
GAAGATAGTCCAACGTCTAC+TGG 0.410857 3_1:-43134041 Msa0358340:CDS
TTCTGGCTGACTCCAGCGCT+CGG 0.412813 3_1:+43130105 None:intergenic
CTCCTATTCTGCTGGAGAAA+AGG 0.412864 3_1:+43137534 None:intergenic
AAATTTCCAATGGCCTTGAA+TGG 0.417001 3_1:-43130564 Msa0358340:CDS
TGAGCATCATGGAAACAATC+AGG 0.426985 3_1:-43135182 Msa0358340:CDS
AACTAACAAAAGGGAGCAAA+AGG 0.431584 3_1:+43137103 None:intergenic
TTCACTAGAGACAATGTCTA+AGG 0.434366 3_1:-43133638 Msa0358340:CDS
TCACATATGCTTCCTGGTGA+TGG 0.437107 3_1:+43130674 None:intergenic
CATGAATGCAGCAGCATACA+TGG 0.437807 3_1:+43131104 None:intergenic
CACTTCTCTTTCTTCTTCAA+GGG 0.438455 3_1:+43136913 None:intergenic
GGAACCAATAAACTAACAAA+AGG 0.438611 3_1:+43137093 None:intergenic
GAGTTCATTCTAGCTTTGTC+AGG 0.439070 3_1:+43137151 None:intergenic
GTTCAGAAGAAGGCGGTCTC+AGG 0.441885 3_1:+43131160 None:intergenic
ATGGTGTTGACTTGCTTGGC+AGG 0.447428 3_1:-43131047 Msa0358340:CDS
ATGAAACCCAAACGCGATAC+AGG 0.449292 3_1:-43131369 Msa0358340:CDS
ACTTCACTCGAAACCTAATC+AGG 0.451175 3_1:-43131211 Msa0358340:CDS
CCTTGAATGGATTCGCATAT+GGG 0.457553 3_1:-43130551 Msa0358340:CDS
TGCCTTTCTCTTTACTGGAA+AGG 0.458480 3_1:+43132266 None:intergenic
AGATGTTGCCTCCAACTGGC+TGG 0.460937 3_1:-43137643 Msa0358340:CDS
ACCTTGACGATAGCTGCAAT+GGG 0.465267 3_1:-43132420 Msa0358340:CDS
ATCCTACTGGCTATTCTGAA+TGG 0.467020 3_1:-43130000 Msa0358340:three_prime_UTR
AAGAATCAACAGAAGACAAA+AGG 0.467235 3_1:-43131548 Msa0358340:CDS
AAACCTAATCAGGTCAAGAA+AGG 0.469046 3_1:-43131201 Msa0358340:CDS
CACAGATAAAGAATGCTATA+CGG 0.471044 3_1:-43130506 Msa0358340:intron
TCTTCAAACCTCCCGAGCGC+TGG 0.475106 3_1:-43130117 Msa0358340:CDS
TGCATTCATGCTTCCTGCCA+TGG 0.475801 3_1:-43131091 Msa0358340:CDS
TGGAAAGAGATTTCAGGTAC+TGG 0.476099 3_1:-43131270 Msa0358340:CDS
GATCATCACTCCTATTCTGC+TGG 0.476212 3_1:+43137526 None:intergenic
TGTTATGAGAACACTCCATC+AGG 0.477977 3_1:+43131133 None:intergenic
TCCCTTTCCAGTAAAGAGAA+AGG 0.479592 3_1:-43132268 Msa0358340:CDS
TGTCATGACAGAAGCAGCTC+AGG 0.480552 3_1:-43131412 Msa0358340:CDS
AATTCAAGATTCAGTGATGC+TGG 0.480702 3_1:+43132178 None:intergenic
ACGTGCTAGGCGGGCATTCA+CGG 0.481581 3_1:+43134095 None:intergenic
TTATTGACAAGTTCCTGCTC+TGG 0.482102 3_1:-43134165 Msa0358340:CDS
GCTGGATCAACAATTTCATC+AGG 0.482908 3_1:+43132196 None:intergenic
GCAAAGGGCATTAGTTGCCT+TGG 0.484305 3_1:-43131526 Msa0358340:CDS
TCATCTCGTTCCTTTGAAGA+AGG 0.485381 3_1:+43137818 None:intergenic
CTGATATAGACGTGCTAGGC+GGG 0.490247 3_1:+43134086 None:intergenic
GCGAACCTGAGAGAAGATTA+GGG 0.490611 3_1:+43138229 None:intergenic
AATCAGGGATCCTTATACCA+TGG 0.493221 3_1:-43135166 Msa0358340:CDS
TACCTTGACGATAGCTGCAA+TGG 0.495232 3_1:-43132421 Msa0358340:CDS
TTCTGGATATGTTAAGATCC+AGG 0.498235 3_1:-43130930 Msa0358340:intron
TCTGGCTGACTCCAGCGCTC+GGG 0.500179 3_1:+43130106 None:intergenic
GGAGGAATTGGATAGGATGA+AGG 0.500236 3_1:-43133617 Msa0358340:CDS
TCAGATATAACTGCTGCTCT+TGG 0.501071 3_1:-43133664 Msa0358340:intron
AGTCAGCCAGAAGTTCATCC+AGG 0.506243 3_1:-43130094 Msa0358340:CDS
CCCATATGCGAATCCATTCA+AGG 0.506629 3_1:+43130551 None:intergenic
GCATCCAGAAGCGTCTGTGC+TGG 0.506806 3_1:-43130962 Msa0358340:CDS
TCTTTCCAGGAACTAGCTCC+AGG 0.506869 3_1:+43131285 None:intergenic
AGTTGCGGCTCTTAGAAAAT+CGG 0.511722 3_1:-43132020 Msa0358340:CDS
GCGAATCCATTCAAGGCCAT+TGG 0.512476 3_1:+43130558 None:intergenic
CAATGGGGAGACAATAGATT+GGG 0.513231 3_1:-43132404 Msa0358340:CDS
GGTTCTTGCCTAGCAGCTCA+GGG 0.514109 3_1:-43131311 Msa0358340:CDS
GAACCAATAAACTAACAAAA+GGG 0.514346 3_1:+43137094 None:intergenic
GGCTGACTCCAGCGCTCGGG+AGG 0.520340 3_1:+43130109 None:intergenic
GAAACCAGATATATCTAGAA+TGG 0.520827 3_1:-43137194 Msa0358340:CDS
TCAAGCTTCAGGCTTCTGTC+AGG 0.522000 3_1:-43135047 Msa0358340:intron
ATCTGGTTTCATCTGTTCAT+CGG 0.522720 3_1:+43137207 None:intergenic
TTATCATAACCCTCCATGGC+AGG 0.524495 3_1:+43131078 None:intergenic
TGTAAAGCTTCCTTCTTCAA+AGG 0.524631 3_1:-43137828 Msa0358340:CDS
CACTAATTCCCATTTAAGTA+GGG 0.526395 3_1:+43130023 None:intergenic
AATGACATGATCAACGTGCT+TGG 0.526726 3_1:+43138293 None:intergenic
GGCGATTGAAGCTGAAACAA+TGG 0.527613 3_1:-43138382 Msa0358340:exon
ATGATACGTAGGCAGGATGA+AGG 0.527807 3_1:+43130611 None:intergenic
GCAATGGGGAGACAATAGAT+TGG 0.528480 3_1:-43132405 Msa0358340:CDS
TTCATGCTTCCTGCCATGGA+GGG 0.528594 3_1:-43131087 Msa0358340:CDS
CTCGACCCTAATCTTCTCTC+AGG 0.530384 3_1:-43138234 Msa0358340:intron
GATTCACTGACCCCAAGAAA+CGG 0.530512 3_1:-43132375 Msa0358340:CDS
CTAGCAAGCGTAGGAAAAGC+AGG 0.532956 3_1:+43137770 None:intergenic
CACAGACGCTTCTGGATGCA+TGG 0.535910 3_1:+43130966 None:intergenic
GAAACTCATTTATATGCTTG+GGG 0.537075 3_1:-43131007 Msa0358340:CDS
AACCTAATCAGGTCAAGAAA+GGG 0.537559 3_1:-43131200 Msa0358340:CDS
GAAACAAGCCAGCCAGTTGG+AGG 0.538581 3_1:+43137635 None:intergenic
TTCTTCTGAACAAAACCTGA+TGG 0.539143 3_1:-43131148 Msa0358340:CDS
CTTCAAAGGAACGAGATGAC+TGG 0.540009 3_1:-43137814 Msa0358340:CDS
AACAGAAGACAAAAGGCAAA+GGG 0.540498 3_1:-43131541 Msa0358340:CDS
GAAAATCGGATGATGCTGAT+GGG 0.542494 3_1:-43132006 Msa0358340:CDS
CAGGGAATACCTTCCAGAGC+AGG 0.543544 3_1:+43134152 None:intergenic
ATATCAGGACATAATTGTCC+TGG 0.544448 3_1:-43134070 Msa0358340:CDS
AAGAGAAAGGCATTAGTGTG+AGG 0.547077 3_1:-43132255 Msa0358340:CDS
GCCATGCATTCGATTCTTCA+AGG 0.548633 3_1:-43133592 Msa0358340:CDS
AAGGCGGTCTCAGGCTCCAA+CGG 0.548801 3_1:+43131169 None:intergenic
GGTGGTCTTTCTAAATCGAA+AGG 0.549002 3_1:-43137235 Msa0358340:CDS
CCAGGAGTCCCTGAGCTGCT+AGG 0.549019 3_1:+43131303 None:intergenic
AAGTAACAATTCTATTAATG+AGG 0.550469 3_1:-43135241 Msa0358340:CDS
ACATATTTCTGAGCTGAGAA+GGG 0.552376 3_1:+43137612 None:intergenic
ATTCATGCTTCCTGCCATGG+AGG 0.553521 3_1:-43131088 Msa0358340:CDS
ACGAACCTGAATAAGAGCTC+TGG 0.553575 3_1:+43131599 None:intergenic
AACATATTTCTGAGCTGAGA+AGG 0.553925 3_1:+43137611 None:intergenic
CAGGGAGTTATGCCATCACC+AGG 0.553984 3_1:-43130686 Msa0358340:CDS
TGAATTAGATATTAATGATG+AGG 0.556352 3_1:-43132161 Msa0358340:CDS
TGGGAAAAGAAGAGTGGCGA+TGG 0.556903 3_1:+43138257 None:intergenic
TGCTAGGCAAGAACCAAGGT+CGG 0.557460 3_1:+43131319 None:intergenic
TGTCTGAGTCAGCTACATCA+AGG 0.558479 3_1:+43130527 None:intergenic
GGGGAAACAAGCCAGCCAGT+TGG 0.560395 3_1:+43137632 None:intergenic
AGAAAATCGGATGATGCTGA+TGG 0.561493 3_1:-43132007 Msa0358340:CDS
TAGGATAACTATATGAACAT+TGG 0.561856 3_1:+43129817 None:intergenic
AGGCATGGTGTTGACTTGCT+TGG 0.566012 3_1:-43131051 Msa0358340:CDS
TTCAAGCATATTGGGTCCTG+TGG 0.566141 3_1:-43135089 Msa0358340:CDS
CAGTCAGTGTCCGTTTCTTG+GGG 0.566747 3_1:+43132365 None:intergenic
GCTAGGCAAGAACCAAGGTC+GGG 0.567980 3_1:+43131320 None:intergenic
GATGCATCAGAACGAAGAGT+AGG 0.569476 3_1:+43130065 None:intergenic
TGACAAGTTCCTGCTCTGGA+AGG 0.572325 3_1:-43134161 Msa0358340:CDS
CAGGAACTTGTCAATAAACA+TGG 0.572492 3_1:+43134171 None:intergenic
CAACAGAAGACAAAAGGCAA+AGG 0.573063 3_1:-43131542 Msa0358340:CDS
CATGATGCTCAACCAAAACA+TGG 0.573444 3_1:+43135194 None:intergenic
TGGCGCACTATTGTTTATTG+GGG 0.573588 3_1:-43136846 Msa0358340:CDS
AGAGAAAGGCATTAGTGTGA+GGG 0.574192 3_1:-43132254 Msa0358340:CDS
TGGTGTTGACTTGCTTGGCA+GGG 0.575140 3_1:-43131046 Msa0358340:CDS
ATGGGAATTAGTGATCCTAC+TGG 0.576406 3_1:-43130013 Msa0358340:exon
AGAAAGGGAAAACACGCCGT+TGG 0.584561 3_1:-43131185 Msa0358340:CDS
GTGTGTCGAGTGATTCAAAT+GGG 0.585674 3_1:+43131493 None:intergenic
TCCTTGAAGAATCGAATGCA+TGG 0.585814 3_1:+43133591 None:intergenic
TGAACTAAAACATGCAGCAA+GGG 0.587442 3_1:-43131628 Msa0358340:CDS
TAGACATTGTCTCTAGTGAA+AGG 0.589950 3_1:+43133641 None:intergenic
GTATCATCTGCTTTACTGGA+AGG 0.590893 3_1:-43130595 Msa0358340:CDS
GAGAGAAGATTAGGGTCGAG+TGG 0.592296 3_1:+43138237 None:intergenic
AAAGCAGATGATACGTAGGC+AGG 0.594451 3_1:+43130604 None:intergenic
GGAAACGTTGAAATTTCCAA+TGG 0.594513 3_1:-43130574 Msa0358340:CDS
TTGTGATCTCAAATTCTGAA+AGG 0.594539 3_1:-43137491 Msa0358340:intron
ATGCATCAGAACGAAGAGTA+GGG 0.596666 3_1:+43130066 None:intergenic
TCAGATGAAATGGACAAAAG+TGG 0.601017 3_1:-43136866 Msa0358340:CDS
TTTACAACTCCATGCTGAGA+TGG 0.602572 3_1:-43130141 Msa0358340:CDS
ACGAAGAGTAGGGATTGCCC+TGG 0.603354 3_1:+43130076 None:intergenic
CCCCATTGCAGCTATCGTCA+AGG 0.603899 3_1:+43132419 None:intergenic
AAATGGGCTCATGACTGCCA+AGG 0.603918 3_1:+43131509 None:intergenic
TGGATCTTAACATATCCAGA+AGG 0.604664 3_1:+43130932 None:intergenic
CTTAACATATCCAGAAGGGA+AGG 0.607991 3_1:+43130937 None:intergenic
ACAGTTATCTGATGTAGTTG+CGG 0.608183 3_1:-43132035 Msa0358340:CDS
GTCTGAGTCAGCTACATCAA+GGG 0.608683 3_1:+43130528 None:intergenic
TCATCATCTGACAAATCATA+CGG 0.609774 3_1:+43132082 None:intergenic
TGTCCTGATATAGACGTGCT+AGG 0.611626 3_1:+43134082 None:intergenic
TTGTTTCAGATACCCGACCT+TGG 0.612890 3_1:-43131332 Msa0358340:CDS
AATTTCGAATTCATATTCTG+GGG 0.614567 3_1:+43129964 None:intergenic
CAGCTATCGTCAAGGTACAA+AGG 0.614700 3_1:+43132427 None:intergenic
GTCAGCCAGAAGTTCATCCA+GGG 0.615475 3_1:-43130093 Msa0358340:CDS
AGAGAAGATTAGGGTCGAGT+GGG 0.616687 3_1:+43138238 None:intergenic
TGATTTGTCAGATGATGACT+CGG 0.617567 3_1:-43132077 Msa0358340:CDS
CAGATAGCAAGAGAGTTTGG+TGG 0.618295 3_1:-43137253 Msa0358340:CDS
GGAAAGAGCTCTTGATGTGG+CGG 0.619198 3_1:-43131676 Msa0358340:CDS
TGTCTAAGGAGGAATTGGAT+AGG 0.620475 3_1:-43133624 Msa0358340:CDS
ATGAACTAAAACATGCAGCA+AGG 0.621170 3_1:-43131629 Msa0358340:CDS
TCCAACGTCTACTGGCAACA+TGG 0.621172 3_1:-43134033 Msa0358340:CDS
TCCATTTCAGGCAACTAACA+GGG 0.621441 3_1:+43134134 None:intergenic
CATATTTCTGAGCTGAGAAG+GGG 0.622801 3_1:+43137613 None:intergenic
ATTCACGGACAGCAAACTGA+AGG 0.624632 3_1:+43134110 None:intergenic
ACCATGTTGCCAGTAGACGT+TGG 0.628592 3_1:+43134032 None:intergenic
TGATACGTAGGCAGGATGAA+GGG 0.631699 3_1:+43130612 None:intergenic
GAGCATCATGGAAACAATCA+GGG 0.632146 3_1:-43135181 Msa0358340:CDS
CTGTGATGACAATGAAGTTG+CGG 0.635972 3_1:+43137129 None:intergenic
TCTAGTTACCAGCAGAACCA+CGG 0.636192 3_1:+43136801 None:intergenic
GATTAAAAGTTAAACAAACA+AGG 0.638103 3_1:+43129912 None:intergenic
AGTGTGTCGAGTGATTCAAA+TGG 0.640642 3_1:+43131492 None:intergenic
AAAATCGGATGATGCTGATG+GGG 0.641038 3_1:-43132005 Msa0358340:intron
ATGAATGCAGCAGCATACAT+GGG 0.642053 3_1:+43131105 None:intergenic
ACTAGAGACAATGTCTAAGG+AGG 0.643408 3_1:-43133635 Msa0358340:CDS
TGGACTATCTTCAAAAGACC+AGG 0.644804 3_1:+43134052 None:intergenic
GGATCTTAACATATCCAGAA+GGG 0.647843 3_1:+43130933 None:intergenic
TTTGAAGAGCCATCTCAGCA+TGG 0.650093 3_1:+43130132 None:intergenic
TTGGTCAAACAGCTACGAGA+GGG 0.651819 3_1:-43131235 Msa0358340:CDS
CAAAGGAACGAGATGACTGG+TGG 0.653562 3_1:-43137811 Msa0358340:CDS
AACAAGAACCTAGCAAGCGT+AGG 0.659649 3_1:+43137761 None:intergenic
GTCGAGTGGGAAAAGAAGAG+TGG 0.666543 3_1:+43138251 None:intergenic
CTGTAAAGATGAATCATCTG+AGG 0.672900 3_1:+43132105 None:intergenic
TTGACGAGCCTTAGAACTCG+AGG 0.677704 3_1:+43135279 None:intergenic
AACCAGTATCTGTAACACCT+CGG 0.681924 3_1:+43137557 None:intergenic
CAGTAAAGCAGATGATACGT+AGG 0.695700 3_1:+43130600 None:intergenic
GGTGGAAAGAGCTCTTGATG+TGG 0.697392 3_1:-43131679 Msa0358340:CDS
ATCCATTCAGAATAGCCAGT+AGG 0.705331 3_1:+43129998 None:intergenic
ATTGGTCAAACAGCTACGAG+AGG 0.709368 3_1:-43131236 Msa0358340:CDS
GAGCTGCTAGGCAAGAACCA+AGG 0.720235 3_1:+43131315 None:intergenic
CCTTGACGATAGCTGCAATG+GGG 0.721657 3_1:-43132419 Msa0358340:CDS
CCTGATATAGACGTGCTAGG+CGG 0.739783 3_1:+43134085 None:intergenic
TGTTCACGGATTTGTCACCG+AGG 0.747870 3_1:-43137574 Msa0358340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAAAAAAAATTAATT+AGG - chr3_1:43132517-43132536 Msa0358340:intron 0.0%
!!! TCAATACATTTTTTATTTAA+AGG - chr3_1:43133665-43133684 Msa0358340:intron 10.0%
!! ATTAAGTATTATATATATTC+TGG - chr3_1:43136341-43136360 Msa0358340:intron 10.0%
!!! TTGAAATTTGTATATATTTT+AGG - chr3_1:43138325-43138344 Msa0358340:CDS 10.0%
!!! TATATTTTTGTGATTTGTAT+GGG + chr3_1:43129789-43129808 None:intergenic 15.0%
!!! TTATATTTTTGTGATTTGTA+TGG + chr3_1:43129790-43129809 None:intergenic 15.0%
!! ATACAAATCACAAAAATATA+AGG - chr3_1:43129789-43129808 Msa0358340:three_prime_UTR 15.0%
!! TAAAATAAAATGAGATTGTT+GGG + chr3_1:43130007-43130026 None:intergenic 15.0%
!! ATAAAATAAAATGAGATTGT+TGG + chr3_1:43130008-43130027 None:intergenic 15.0%
!! CTTACTTATAACAAAAAATA+AGG + chr3_1:43130218-43130237 None:intergenic 15.0%
!! TTATTTGCTCAAAATAATAT+TGG - chr3_1:43130482-43130501 Msa0358340:intron 15.0%
!!! ATTCAAAAACTTTAAAAACT+TGG + chr3_1:43131800-43131819 None:intergenic 15.0%
!! ATTACTATGATACATATATT+TGG - chr3_1:43134489-43134508 Msa0358340:intron 15.0%
!! TTGTGTAAATAACTTAAATT+AGG - chr3_1:43134728-43134747 Msa0358340:intron 15.0%
!!! TTTTTATAGGAATTTATCAT+GGG + chr3_1:43135300-43135319 None:intergenic 15.0%
!!! ATTTTTATAGGAATTTATCA+TGG + chr3_1:43135301-43135320 None:intergenic 15.0%
!! TTCAAAGAAAATAACAAAAA+AGG + chr3_1:43138310-43138329 None:intergenic 15.0%
!! ATTAAATTTCGAATGAATTT+AGG + chr3_1:43138397-43138416 None:intergenic 15.0%
!! AATAAGTTAAAAAGAGCTTA+TGG + chr3_1:43130179-43130198 None:intergenic 20.0%
!! TTCTCAATGTCAAATTAATT+TGG + chr3_1:43130848-43130867 None:intergenic 20.0%
!! ATAATACTAGCTAATTTATG+TGG + chr3_1:43131447-43131466 None:intergenic 20.0%
!!! TTTTATATATGTGTGGAATT+TGG + chr3_1:43131543-43131562 None:intergenic 20.0%
!!! AGACTTATTTTATATATGTG+TGG + chr3_1:43131550-43131569 None:intergenic 20.0%
!! AATAATTCTAACATACTGAT+TGG + chr3_1:43131579-43131598 None:intergenic 20.0%
!!! ACTTTTACATATAAGTCTAT+GGG + chr3_1:43132027-43132046 None:intergenic 20.0%
!!! TACTTTTACATATAAGTCTA+TGG + chr3_1:43132028-43132047 None:intergenic 20.0%
!! AAGTAACAATTCTATTAATG+AGG - chr3_1:43132951-43132970 Msa0358340:intron 20.0%
!!! AGTTAAATAGATTAGTTTCA+TGG + chr3_1:43133779-43133798 None:intergenic 20.0%
!! TGAAACTAATCTATTTAACT+TGG - chr3_1:43133779-43133798 Msa0358340:intron 20.0%
!! ATGTATCATAGTAATAAAGA+TGG + chr3_1:43134484-43134503 None:intergenic 20.0%
!! GTTATATCTGACATAAATAT+AGG + chr3_1:43134519-43134538 None:intergenic 20.0%
!! AAATATCACTTACTTGATTA+TGG - chr3_1:43134633-43134652 Msa0358340:intron 20.0%
!! AATATCACTTACTTGATTAT+GGG - chr3_1:43134634-43134653 Msa0358340:intron 20.0%
!!! TTGTTTAAGCTATTTCTATA+AGG - chr3_1:43134842-43134861 Msa0358340:intron 20.0%
!! TATCATGGAGTTATAAAAAT+AGG - chr3_1:43134865-43134884 Msa0358340:intron 20.0%
!! AAAATAGGTTAAACAACTTA+CGG - chr3_1:43134880-43134899 Msa0358340:intron 20.0%
!!! TTTTATAGGAATTTATCATG+GGG + chr3_1:43135299-43135318 None:intergenic 20.0%
!!! TAGACTTGTTAGATTTTTAT+AGG + chr3_1:43135313-43135332 None:intergenic 20.0%
!! TGTTAGATAATATGATAACA+TGG + chr3_1:43135408-43135427 None:intergenic 20.0%
!!! TTTACAATATGATATTTTGC+TGG + chr3_1:43135471-43135490 None:intergenic 20.0%
!! TATCATATTGTAAAACAAGA+TGG - chr3_1:43135477-43135496 Msa0358340:intron 20.0%
!!! ATTTTTCGAACTAAATGATT+AGG + chr3_1:43135696-43135715 None:intergenic 20.0%
!!! TAATCATTTAGTTCGAAAAA+TGG - chr3_1:43135695-43135714 Msa0358340:intron 20.0%
!! TGAATTAGATATTAATGATG+AGG - chr3_1:43136031-43136050 Msa0358340:intron 20.0%
!! ATAATCAAAATGCAACTAAA+AGG + chr3_1:43136235-43136254 None:intergenic 20.0%
!!! TTTTTTTTTACTCTTATTGC+AGG - chr3_1:43136492-43136511 Msa0358340:intron 20.0%
!!! GCTAGTACTTTTTTTTTTTT+TGG - chr3_1:43137775-43137794 Msa0358340:CDS 20.0%
!!! TTTTTTTTTTGGTACAATCT+CGG - chr3_1:43137786-43137805 Msa0358340:CDS 20.0%
!! ACTTAAATGTATATCATGAT+AGG - chr3_1:43137899-43137918 Msa0358340:intron 20.0%
!! CTTAAATGTATATCATGATA+GGG - chr3_1:43137900-43137919 Msa0358340:intron 20.0%
!! TTAAATGTATATCATGATAG+GGG - chr3_1:43137901-43137920 Msa0358340:intron 20.0%
!! AGAGATAATAACAATCAATA+TGG - chr3_1:43137980-43137999 Msa0358340:intron 20.0%
!!! TTTTTTTGTTTTACTGTAGA+TGG - chr3_1:43138018-43138037 Msa0358340:intron 20.0%
!!! ATTTAAGTAGGGAATTTTAA+TGG + chr3_1:43138161-43138180 None:intergenic 20.0%
!! ATTAAAATTCCCTACTTAAA+TGG - chr3_1:43138160-43138179 Msa0358340:intron 20.0%
!! TTAAAATTCCCTACTTAAAT+GGG - chr3_1:43138161-43138180 Msa0358340:intron 20.0%
!! GATTAAAAGTTAAACAAACA+AGG + chr3_1:43138283-43138302 None:intergenic 20.0%
!!! TGTTTGTTTAACTTTTAATC+CGG - chr3_1:43138283-43138302 Msa0358340:CDS 20.0%
! AAGCTGTAAGTAATTAAACA+AGG + chr3_1:43130302-43130321 None:intergenic 25.0%
!! TATGATGTTTTCTTTGTTCA+CGG - chr3_1:43130604-43130623 Msa0358340:CDS 25.0%
! GCATATAAAAATGAGTTTAC+GGG + chr3_1:43130755-43130774 None:intergenic 25.0%
! GGCATATAAAAATGAGTTTA+CGG + chr3_1:43130756-43130775 None:intergenic 25.0%
! TAGAGTAAAAAACGAGTTAA+AGG + chr3_1:43130777-43130796 None:intergenic 25.0%
! GAACCAATAAACTAACAAAA+GGG + chr3_1:43131101-43131120 None:intergenic 25.0%
! AAATACTGGTGAAGAAAAAA+CGG + chr3_1:43131220-43131239 None:intergenic 25.0%
! GAAGAATAAACTGAAAATAC+TGG + chr3_1:43131234-43131253 None:intergenic 25.0%
!! GTATTTTCAGTTTATTCTTC+AGG - chr3_1:43131234-43131253 Msa0358340:CDS 25.0%
! AATCCAATATATTTCACAGA+CGG + chr3_1:43131491-43131510 None:intergenic 25.0%
! AGAATTATTGTATACAGTGA+AGG - chr3_1:43131590-43131609 Msa0358340:CDS 25.0%
!! AACATGTAATAGTTTTCTTC+AGG - chr3_1:43131682-43131701 Msa0358340:intron 25.0%
! AATATTATGCAGTAAATGCA+TGG - chr3_1:43131817-43131836 Msa0358340:intron 25.0%
! AATAGGTTACAAACTTATAG+TGG + chr3_1:43131857-43131876 None:intergenic 25.0%
! GAATATTCACCTGAATATTA+AGG - chr3_1:43131894-43131913 Msa0358340:intron 25.0%
! AAGTAGTATCCTTAATATTC+AGG + chr3_1:43131906-43131925 None:intergenic 25.0%
! TGAATATTAAGGATACTACT+TGG - chr3_1:43131905-43131924 Msa0358340:intron 25.0%
! TAGAAAACAAAGTGAAAACA+AGG + chr3_1:43132361-43132380 None:intergenic 25.0%
! TCAAATACAAGAAATAGCAA+AGG - chr3_1:43132440-43132459 Msa0358340:CDS 25.0%
!!! CTTTAGCTTTTACAAAATCA+CGG + chr3_1:43132795-43132814 None:intergenic 25.0%
! ACAAGAAAATAGATTTGATC+AGG + chr3_1:43132868-43132887 None:intergenic 25.0%
! AAATGATGTTCAAGCATATT+GGG - chr3_1:43133095-43133114 Msa0358340:intron 25.0%
!!! TTAGTTTTTCCTTTAATCAC+AGG - chr3_1:43133180-43133199 Msa0358340:intron 25.0%
! TCTTGAAATAATCCTCTATT+TGG - chr3_1:43133206-43133225 Msa0358340:intron 25.0%
!!! AGATTAGTTTCATTCAAATC+TGG + chr3_1:43133613-43133632 None:intergenic 25.0%
! TCTAGAAAAATGTAAGAGAT+GGG - chr3_1:43133688-43133707 Msa0358340:intron 25.0%
! TAAAATAATGCAAGTTAGAG+AGG + chr3_1:43133986-43134005 None:intergenic 25.0%
!!! CTCTAACTTGCATTATTTTA+TGG - chr3_1:43133986-43134005 Msa0358340:intron 25.0%
!! AAAATGAGTGAAGTTTTCAT+AGG - chr3_1:43134817-43134836 Msa0358340:intron 25.0%
! AAATAGGTTAAACAACTTAC+GGG - chr3_1:43134881-43134900 Msa0358340:intron 25.0%
!!! CTTAAGTAGTTTTCTAAAAC+AGG + chr3_1:43134991-43135010 None:intergenic 25.0%
! TTAGAAAACTACTTAAGCAT+CGG - chr3_1:43134994-43135013 Msa0358340:intron 25.0%
! TATGTCAGATCTATCAAAAT+AGG - chr3_1:43135095-43135114 Msa0358340:CDS 25.0%
!! TAAAAAGTGAAGAGTACAAT+GGG + chr3_1:43135357-43135376 None:intergenic 25.0%
!! TTAAAAAGTGAAGAGTACAA+TGG + chr3_1:43135358-43135377 None:intergenic 25.0%
!!! ATGAATTCCTTTTTCATTGA+GGG - chr3_1:43135531-43135550 Msa0358340:intron 25.0%
!!! TCATTTTTTGTGATTGTTTC+AGG - chr3_1:43135657-43135676 Msa0358340:intron 25.0%
!! GCTTCAAATTCTAGAAAAAA+AGG - chr3_1:43135849-43135868 Msa0358340:intron 25.0%
!!! TTTTTTTGCTGAAAGTTTGA+TGG - chr3_1:43136452-43136471 Msa0358340:intron 25.0%
! TTTGTGTTTATATTTCCTGT+TGG - chr3_1:43137421-43137440 Msa0358340:intron 25.0%
! ATCTCTTAGAATTTCACTAT+TGG + chr3_1:43137966-43137985 None:intergenic 25.0%
! AATTTCGAATTCATATTCTG+GGG + chr3_1:43138231-43138250 None:intergenic 25.0%
! CAATTTCGAATTCATATTCT+GGG + chr3_1:43138232-43138251 None:intergenic 25.0%
! ACAATTTCGAATTCATATTC+TGG + chr3_1:43138233-43138252 None:intergenic 25.0%
!!! GTTTGTTTAACTTTTAATCC+GGG - chr3_1:43138284-43138303 Msa0358340:CDS 25.0%
! AGGTATCTAGATTTAACATT+TGG - chr3_1:43138345-43138364 Msa0358340:CDS 25.0%
! TAGGATAACTATATGAACAT+TGG + chr3_1:43138378-43138397 None:intergenic 25.0%
AACAATGGAGAAGAAAGAAT+TGG - chr3_1:43129825-43129844 Msa0358340:three_prime_UTR 30.0%
!! CCATTTTTACCTTTTCAAGA+CGG - chr3_1:43130118-43130137 Msa0358340:CDS 30.0%
TAATTAAACAAGGCTCTGTT+TGG + chr3_1:43130292-43130311 None:intergenic 30.0%
TTGTGATCTCAAATTCTGAA+AGG - chr3_1:43130701-43130720 Msa0358340:intron 30.0%
GAAACCAGATATATCTAGAA+TGG - chr3_1:43130998-43131017 Msa0358340:CDS 30.0%
GGAACCAATAAACTAACAAA+AGG + chr3_1:43131102-43131121 None:intergenic 30.0%
! ATTGGTTCCATATATTGACA+TGG - chr3_1:43131113-43131132 Msa0358340:CDS 30.0%
TGCAAAACCATGTCAATATA+TGG + chr3_1:43131123-43131142 None:intergenic 30.0%
! CAGTTTTCATTGATGTTCTT+GGG - chr3_1:43131141-43131160 Msa0358340:CDS 30.0%
AATACTGGTGAAGAAAAAAC+GGG + chr3_1:43131219-43131238 None:intergenic 30.0%
AAAATTTCAGACACTGAAAC+AGG - chr3_1:43131413-43131432 Msa0358340:CDS 30.0%
TTGGATTTCCTTCATGTAAA+TGG - chr3_1:43131504-43131523 Msa0358340:CDS 30.0%
AGAAGATACCATTTACATGA+AGG + chr3_1:43131515-43131534 None:intergenic 30.0%
TACAGTGAAGGAAACAAAAA+AGG - chr3_1:43131602-43131621 Msa0358340:CDS 30.0%
TGTCCTAAACTAATAGTTTG+TGG - chr3_1:43131638-43131657 Msa0358340:CDS 30.0%
! CTTCCACAAACTATTAGTTT+AGG + chr3_1:43131644-43131663 None:intergenic 30.0%
GTGATGTTAAACGCTTTAAT+AGG + chr3_1:43131874-43131893 None:intergenic 30.0%
ATATTAAGGATACTACTTGG+AGG - chr3_1:43131908-43131927 Msa0358340:intron 30.0%
CCAAAGATTTCAATTAAGAC+TGG + chr3_1:43132068-43132087 None:intergenic 30.0%
CCAGTCTTAATTGAAATCTT+TGG - chr3_1:43132065-43132084 Msa0358340:CDS 30.0%
TAGATTTATGACTTCTCTGT+TGG - chr3_1:43132584-43132603 Msa0358340:intron 30.0%
ATTTGATCAGGAAACAACAA+TGG + chr3_1:43132856-43132875 None:intergenic 30.0%
!!! GAGATTTTTTCCATGGTATA+AGG + chr3_1:43133039-43133058 None:intergenic 30.0%
CAAATGATGTTCAAGCATAT+TGG - chr3_1:43133094-43133113 Msa0358340:intron 30.0%
ATAATCCTCTATTTGGATTG+CGG - chr3_1:43133213-43133232 Msa0358340:intron 30.0%
! TCTATCAATTTTACATGCCA+AGG + chr3_1:43133520-43133539 None:intergenic 30.0%
TTGGCATGTAAAATTGATAG+AGG - chr3_1:43133519-43133538 Msa0358340:intron 30.0%
GTCTAGAAAAATGTAAGAGA+TGG - chr3_1:43133687-43133706 Msa0358340:intron 30.0%
!!! CATTGGCAACATGATTTTTT+TGG + chr3_1:43133735-43133754 None:intergenic 30.0%
! TGGTTATTGTTGTTGTCATT+AGG - chr3_1:43133799-43133818 Msa0358340:intron 30.0%
ACTCGCATCTTAGATTATAT+AGG - chr3_1:43133837-43133856 Msa0358340:intron 30.0%
GTATAGCAGAATGATGAAAA+AGG + chr3_1:43134235-43134254 None:intergenic 30.0%
TGCTATACTGAAAAAACATG+TGG - chr3_1:43134247-43134266 Msa0358340:intron 30.0%
GCTATACTGAAAAAACATGT+GGG - chr3_1:43134248-43134267 Msa0358340:intron 30.0%
AAAAAACATGTGGGAATTGA+AGG - chr3_1:43134257-43134276 Msa0358340:intron 30.0%
AATGAACATCAAATTGGAAG+GGG + chr3_1:43134399-43134418 None:intergenic 30.0%
CAATGAACATCAAATTGGAA+GGG + chr3_1:43134400-43134419 None:intergenic 30.0%
! TATGGGTGTCTTTGATAATA+AGG - chr3_1:43134651-43134670 Msa0358340:intron 30.0%
AATTAGGCACTCATTCAATA+AGG - chr3_1:43134744-43134763 Msa0358340:intron 30.0%
!! GCTATTTCTATAAGGTATCA+TGG - chr3_1:43134850-43134869 Msa0358340:intron 30.0%
!! TTTCTAAAACAGGACGAAAA+GGG + chr3_1:43134981-43135000 None:intergenic 30.0%
!!! TTTTCTAAAACAGGACGAAA+AGG + chr3_1:43134982-43135001 None:intergenic 30.0%
TAGAAAACTACTTAAGCATC+GGG - chr3_1:43134995-43135014 Msa0358340:intron 30.0%
TTAAAGCATATGACCTATGA+TGG - chr3_1:43135125-43135144 Msa0358340:CDS 30.0%
AAATTGCTAATTGGGTAGTA+GGG + chr3_1:43135174-43135193 None:intergenic 30.0%
AAAATTGCTAATTGGGTAGT+AGG + chr3_1:43135175-43135194 None:intergenic 30.0%
!!! ACCCAATTAGCAATTTTTTG+CGG - chr3_1:43135178-43135197 Msa0358340:CDS 30.0%
ACCGCAAAAAATTGCTAATT+GGG + chr3_1:43135182-43135201 None:intergenic 30.0%
TACCGCAAAAAATTGCTAAT+TGG + chr3_1:43135183-43135202 None:intergenic 30.0%
GAATTCTATGCTTCAGATTA+AGG - chr3_1:43135229-43135248 Msa0358340:CDS 30.0%
AACAAGTCTATTAAATTGCC+AGG - chr3_1:43135323-43135342 Msa0358340:intron 30.0%
!! GATGAATTCCTTTTTCATTG+AGG - chr3_1:43135530-43135549 Msa0358340:intron 30.0%
!! TGAATTCCTTTTTCATTGAG+GGG - chr3_1:43135532-43135551 Msa0358340:intron 30.0%
GATTTATAAAACTACCGAGA+GGG + chr3_1:43135581-43135600 None:intergenic 30.0%
AGATTTATAAAACTACCGAG+AGG + chr3_1:43135582-43135601 None:intergenic 30.0%
!! TTTTTGTGATTGTTTCAGGT+AGG - chr3_1:43135661-43135680 Msa0358340:intron 30.0%
AATGGCTAGTAATATTGCTT+TGG - chr3_1:43135713-43135732 Msa0358340:intron 30.0%
!!! TCAAGGTACAAAGGATTTTT+TGG + chr3_1:43135759-43135778 None:intergenic 30.0%
!! TTCTAGAAAAAAAGGTGTTG+AGG - chr3_1:43135857-43135876 Msa0358340:intron 30.0%
GAGGGATAAAAAGAAGTTAT+TGG - chr3_1:43135956-43135975 Msa0358340:intron 30.0%
TCATCATCTGACAAATCATA+CGG + chr3_1:43136113-43136132 None:intergenic 30.0%
CAACAAATTGCATTTAGTGT+AGG + chr3_1:43136266-43136285 None:intergenic 30.0%
! AGCCAATTAAACTTTTACCA+CGG + chr3_1:43136291-43136310 None:intergenic 30.0%
CAAACTTTCAGCAAAAAAAC+AGG + chr3_1:43136451-43136470 None:intergenic 30.0%
!!! TTTTTTACTCTTATTGCAGG+TGG - chr3_1:43136495-43136514 Msa0358340:intron 30.0%
AAGAATCAACAGAAGACAAA+AGG - chr3_1:43136644-43136663 Msa0358340:intron 30.0%
! CGTTGACTAATATCTACATT+AGG + chr3_1:43136745-43136764 None:intergenic 30.0%
TAGTCAACGAATAATGATAC+TGG - chr3_1:43136756-43136775 Msa0358340:intron 30.0%
!!! GTACTGGAACTTTTTTGAAT+TGG - chr3_1:43136938-43136957 Msa0358340:CDS 30.0%
!!! TTTTTTATCATAACCCTCCA+TGG + chr3_1:43137121-43137140 None:intergenic 30.0%
TGGAGGGTTATGATAAAAAA+AGG - chr3_1:43137121-43137140 Msa0358340:CDS 30.0%
GGTTATGATAAAAAAAGGCA+TGG - chr3_1:43137126-43137145 Msa0358340:CDS 30.0%
GGAAACTCATTTATATGCTT+GGG - chr3_1:43137184-43137203 Msa0358340:CDS 30.0%
GAAACTCATTTATATGCTTG+GGG - chr3_1:43137185-43137204 Msa0358340:CDS 30.0%
ATATGTTAAGATCCAGGTAT+TGG - chr3_1:43137268-43137287 Msa0358340:CDS 30.0%
ACATTTAGACACACTTGTAA+GGG + chr3_1:43137363-43137382 None:intergenic 30.0%
TTACAAGTGTGTCTAAATGT+GGG - chr3_1:43137363-43137382 Msa0358340:intron 30.0%
!! GGTTGATAAATTTGATAGTG+TGG - chr3_1:43137384-43137403 Msa0358340:intron 30.0%
!!! TTTGCATTTTAACTCATGCA+GGG - chr3_1:43137488-43137507 Msa0358340:intron 30.0%
CACAGATAAAGAATGCTATA+CGG - chr3_1:43137686-43137705 Msa0358340:intron 30.0%
! TACAAGCTTTTCAATTCTCT+CGG - chr3_1:43137753-43137772 Msa0358340:intron 30.0%
!!! AGGTTTAATTTTTTCTGCAC+TGG - chr3_1:43137830-43137849 Msa0358340:CDS 30.0%
! ACTGGTCTACAATTATTTGA+TGG - chr3_1:43137848-43137867 Msa0358340:intron 30.0%
!! GGGAATTTTAATGGTCATTT+TGG + chr3_1:43138152-43138171 None:intergenic 30.0%
CACTAATTCCCATTTAAGTA+GGG + chr3_1:43138172-43138191 None:intergenic 30.0%
TCACTAATTCCCATTTAAGT+AGG + chr3_1:43138173-43138192 None:intergenic 30.0%
AGAAAATAACAAAAAAGGCC+CGG + chr3_1:43138305-43138324 None:intergenic 30.0%
! ACCAATGTCTTCAATTTTGC+AGG - chr3_1:43130038-43130057 Msa0358340:CDS 35.0%
CCGTCTTGAAAAGGTAAAAA+TGG + chr3_1:43130121-43130140 None:intergenic 35.0%
!! TTACCTTTTCAAGACGGTTT+CGG - chr3_1:43130124-43130143 Msa0358340:CDS 35.0%
TGTAAAGCTTCCTTCTTCAA+AGG - chr3_1:43130364-43130383 Msa0358340:intron 35.0%
! ACATATTTCTGAGCTGAGAA+GGG + chr3_1:43130583-43130602 None:intergenic 35.0%
! AACATATTTCTGAGCTGAGA+AGG + chr3_1:43130584-43130603 None:intergenic 35.0%
!!! CTCGTTTTTTACTCTAATGC+TGG - chr3_1:43130781-43130800 Msa0358340:intron 35.0%
! ATCTGGTTTCATCTGTTCAT+CGG + chr3_1:43130988-43131007 None:intergenic 35.0%
! TGTGCCATTCTAGATATATC+TGG + chr3_1:43131005-43131024 None:intergenic 35.0%
AACTAACAAAAGGGAGCAAA+AGG + chr3_1:43131092-43131111 None:intergenic 35.0%
!! GCTCCCTTTTGTTAGTTTAT+TGG - chr3_1:43131095-43131114 Msa0358340:CDS 35.0%
! GCAGTTTTCATTGATGTTCT+TGG - chr3_1:43131140-43131159 Msa0358340:CDS 35.0%
! TTTTCATTGATGTTCTTGGG+AGG - chr3_1:43131144-43131163 Msa0358340:CDS 35.0%
ATACTGGTGAAGAAAAAACG+GGG + chr3_1:43131218-43131237 None:intergenic 35.0%
CACTTCTCTTTCTTCTTCAA+GGG + chr3_1:43131282-43131301 None:intergenic 35.0%
TCACTTCTCTTTCTTCTTCA+AGG + chr3_1:43131283-43131302 None:intergenic 35.0%
GATAGAAACCTCAGATGAAA+TGG - chr3_1:43131316-43131335 Msa0358340:CDS 35.0%
! ACTTTTGTCCATTTCATCTG+AGG + chr3_1:43131327-43131346 None:intergenic 35.0%
TCAGATGAAATGGACAAAAG+TGG - chr3_1:43131326-43131345 Msa0358340:CDS 35.0%
CTACCGTCTGTGAAATATAT+TGG - chr3_1:43131485-43131504 Msa0358340:CDS 35.0%
! AAACTTTAAAAACTTGGCCC+TGG + chr3_1:43131794-43131813 None:intergenic 35.0%
TCTAGAAGAGCTGATTAACA+GGG + chr3_1:43132116-43132135 None:intergenic 35.0%
ATCTAGAAGAGCTGATTAAC+AGG + chr3_1:43132117-43132136 None:intergenic 35.0%
TGTTAATCAGCTCTTCTAGA+TGG - chr3_1:43132116-43132135 Msa0358340:CDS 35.0%
CATGCTTGATTTCTGATTCT+TGG - chr3_1:43132217-43132236 Msa0358340:CDS 35.0%
TATGACTTCTCTGTTGGAAT+AGG - chr3_1:43132590-43132609 Msa0358340:intron 35.0%
ATGACTTCTCTGTTGGAATA+GGG - chr3_1:43132591-43132610 Msa0358340:intron 35.0%
TTCTACATACAGTGAGAGAT+AGG + chr3_1:43132621-43132640 None:intergenic 35.0%
GCTGTTCATGTTTGATATCA+CGG - chr3_1:43132744-43132763 Msa0358340:intron 35.0%
! TAGCTTTTACAAAATCACGG+TGG + chr3_1:43132792-43132811 None:intergenic 35.0%
TCAAGATGACCTGTGATTAA+AGG + chr3_1:43133192-43133211 None:intergenic 35.0%
TAATCCTCTATTTGGATTGC+GGG - chr3_1:43133214-43133233 Msa0358340:intron 35.0%
ACTTACAAAACTTTGTTGCG+TGG - chr3_1:43133244-43133263 Msa0358340:intron 35.0%
TCAGATTGCAGGAAGAAAAA+CGG + chr3_1:43133379-43133398 None:intergenic 35.0%
TTGTAGTATGTTCAGATTGC+AGG + chr3_1:43133390-43133409 None:intergenic 35.0%
!!! GTTTTGAAGGATATGTACCA+TGG + chr3_1:43133463-43133482 None:intergenic 35.0%
TGATAGAGGATAGTACTCAT+CGG - chr3_1:43133533-43133552 Msa0358340:intron 35.0%
AAAAATGTAAGAGATGGGTC+TGG - chr3_1:43133693-43133712 Msa0358340:intron 35.0%
GCACAGAACATTGTTATCAT+TGG + chr3_1:43133752-43133771 None:intergenic 35.0%
CGCATCTTAGATTATATAGG+AGG - chr3_1:43133840-43133859 Msa0358340:intron 35.0%
AAGCATATACACATCAACAG+TGG + chr3_1:43133960-43133979 None:intergenic 35.0%
!! ATTATTTTATGGCTTCTCCC+AGG - chr3_1:43133997-43134016 Msa0358340:CDS 35.0%
TTGTCAATAAACATGGACCT+GGG + chr3_1:43134017-43134036 None:intergenic 35.0%
CAGGAACTTGTCAATAAACA+TGG + chr3_1:43134024-43134043 None:intergenic 35.0%
ATATCAGGACATAATTGTCC+TGG - chr3_1:43134122-43134141 Msa0358340:CDS 35.0%
!! ATACAAGCTTGTTGCTCAAT+AGG + chr3_1:43134212-43134231 None:intergenic 35.0%
ATGAACATCAAATTGGAAGG+GGG + chr3_1:43134398-43134417 None:intergenic 35.0%
GCAATGAACATCAAATTGGA+AGG + chr3_1:43134401-43134420 None:intergenic 35.0%
TGCAGCAATGAACATCAAAT+TGG + chr3_1:43134405-43134424 None:intergenic 35.0%
! GAAAGCATGTGAGATTGTTA+TGG + chr3_1:43134434-43134453 None:intergenic 35.0%
GTCTAGAGAATACTAAGTAG+AGG + chr3_1:43134456-43134475 None:intergenic 35.0%
TAGACATTGTCTCTAGTGAA+AGG + chr3_1:43134554-43134573 None:intergenic 35.0%
TTCACTAGAGACAATGTCTA+AGG - chr3_1:43134554-43134573 Msa0358340:intron 35.0%
TGATAATAAGGATCGCAAGA+AGG - chr3_1:43134663-43134682 Msa0358340:intron 35.0%
GAACTATTGTTGTCCACTTA+GGG - chr3_1:43134700-43134719 Msa0358340:intron 35.0%
GCATTTGTGAGAGCTTATTT+GGG + chr3_1:43134959-43134978 None:intergenic 35.0%
! AGAAAACTACTTAAGCATCG+GGG - chr3_1:43134996-43135015 Msa0358340:intron 35.0%
GAACAATTTCTCTATCTGGA+AGG + chr3_1:43135022-43135041 None:intergenic 35.0%
ATAATGCAGCAAAGTTCAAG+CGG + chr3_1:43135044-43135063 None:intergenic 35.0%
CTTTGCTGCATTATTTCCTA+TGG - chr3_1:43135050-43135069 Msa0358340:CDS 35.0%
TAGTAGGGAACTGTAAGTTA+GGG + chr3_1:43135159-43135178 None:intergenic 35.0%
AAACCAAGGATACTGAGAAA+AGG + chr3_1:43135256-43135275 None:intergenic 35.0%
GTACAATGGGAAAATATTCC+TGG + chr3_1:43135344-43135363 None:intergenic 35.0%
! ATCTACATTTTCCAGTTCAG+AGG - chr3_1:43135890-43135909 Msa0358340:intron 35.0%
ACTAATGCCTTTCTCTTTAC+TGG + chr3_1:43135934-43135953 None:intergenic 35.0%
AATTCAAGATTCAGTGATGC+TGG + chr3_1:43136017-43136036 None:intergenic 35.0%
CTGTAAAGATGAATCATCTG+AGG + chr3_1:43136090-43136109 None:intergenic 35.0%
! TGATTTGTCAGATGATGACT+CGG - chr3_1:43136115-43136134 Msa0358340:intron 35.0%
ACAGTTATCTGATGTAGTTG+CGG - chr3_1:43136157-43136176 Msa0358340:intron 35.0%
TGCCGTGGTAAAAGTTTAAT+TGG - chr3_1:43136286-43136305 Msa0358340:intron 35.0%
!!! TGCATGTTTTAGTTCATCTG+GGG + chr3_1:43136560-43136579 None:intergenic 35.0%
!!! CTGCATGTTTTAGTTCATCT+GGG + chr3_1:43136561-43136580 None:intergenic 35.0%
ATGAACTAAAACATGCAGCA+AGG - chr3_1:43136563-43136582 Msa0358340:intron 35.0%
TGAACTAAAACATGCAGCAA+GGG - chr3_1:43136564-43136583 Msa0358340:intron 35.0%
!! TGCTGTGATATAGCTTTAGA+AGG - chr3_1:43136616-43136635 Msa0358340:intron 35.0%
AACAGAAGACAAAAGGCAAA+GGG - chr3_1:43136651-43136670 Msa0358340:intron 35.0%
AAACCTAATCAGGTCAAGAA+AGG - chr3_1:43136991-43137010 Msa0358340:intron 35.0%
AACCTAATCAGGTCAAGAAA+GGG - chr3_1:43136992-43137011 Msa0358340:intron 35.0%
!!! ATCAGGTTTTGTTCAGAAGA+AGG + chr3_1:43137045-43137064 None:intergenic 35.0%
TTCTTCTGAACAAAACCTGA+TGG - chr3_1:43137044-43137063 Msa0358340:intron 35.0%
GGGAAACTCATTTATATGCT+TGG - chr3_1:43137183-43137202 Msa0358340:CDS 35.0%
GGATCTTAACATATCCAGAA+GGG + chr3_1:43137262-43137281 None:intergenic 35.0%
TGGATCTTAACATATCCAGA+AGG + chr3_1:43137263-43137282 None:intergenic 35.0%
TTCTGGATATGTTAAGATCC+AGG - chr3_1:43137262-43137281 Msa0358340:CDS 35.0%
ATTTAACTGAAAGCCCTATG+AGG - chr3_1:43137309-43137328 Msa0358340:intron 35.0%
AGAATATGTCAGTCCTCATA+GGG + chr3_1:43137325-43137344 None:intergenic 35.0%
TAGAATATGTCAGTCCTCAT+AGG + chr3_1:43137326-43137345 None:intergenic 35.0%
CACATTTAGACACACTTGTA+AGG + chr3_1:43137364-43137383 None:intergenic 35.0%
CTTACAAGTGTGTCTAAATG+TGG - chr3_1:43137362-43137381 Msa0358340:intron 35.0%
!! TTGATAGTGTGGTGTTGTAT+TGG - chr3_1:43137395-43137414 Msa0358340:intron 35.0%
! CACAAAAATGAAGTACCAAC+AGG + chr3_1:43137439-43137458 None:intergenic 35.0%
!! CTGTTGGTACTTCATTTTTG+TGG - chr3_1:43137437-43137456 Msa0358340:intron 35.0%
!!! CTTTGCATTTTAACTCATGC+AGG - chr3_1:43137487-43137506 Msa0358340:intron 35.0%
GGAAACGTTGAAATTTCCAA+TGG - chr3_1:43137618-43137637 Msa0358340:CDS 35.0%
! AAATTTCCAATGGCCTTGAA+TGG - chr3_1:43137628-43137647 Msa0358340:CDS 35.0%
GAATGCTATACGGTAAGTAA+AGG - chr3_1:43137696-43137715 Msa0358340:intron 35.0%
TAGTACTTCGGTCATCAAAA+AGG - chr3_1:43137810-43137829 Msa0358340:CDS 35.0%
AATGTATATCATGATAGGGG+TGG - chr3_1:43137904-43137923 Msa0358340:intron 35.0%
ATGTATATCATGATAGGGGT+GGG - chr3_1:43137905-43137924 Msa0358340:intron 35.0%
AATGACATGATCAACGTGCT+TGG + chr3_1:43129902-43129921 None:intergenic 40.0%
AATGAGATTGTTGGGTCCTA+GGG + chr3_1:43129999-43130018 None:intergenic 40.0%
AAATGAGATTGTTGGGTCCT+AGG + chr3_1:43130000-43130019 None:intergenic 40.0%
GCCTGCAAAATTGAAGACAT+TGG + chr3_1:43130042-43130061 None:intergenic 40.0%
! TTCAATTTTGCAGGCAGTGT+AGG - chr3_1:43130047-43130066 Msa0358340:CDS 40.0%
AGGTCTCAATTACAGAGAAC+AGG - chr3_1:43130067-43130086 Msa0358340:CDS 40.0%
! TCATCTCGTTCCTTTGAAGA+AGG + chr3_1:43130377-43130396 None:intergenic 40.0%
CTTGCTAGGTTCTTGTTACT+TGG - chr3_1:43130437-43130456 Msa0358340:intron 40.0%
CATTCGATGTGAGAAAAGCA+GGG + chr3_1:43130518-43130537 None:intergenic 40.0%
! CATATTTCTGAGCTGAGAAG+GGG + chr3_1:43130582-43130601 None:intergenic 40.0%
AACCAGTATCTGTAACACCT+CGG + chr3_1:43130638-43130657 None:intergenic 40.0%
! TTCCTTTTCTCCAGCAGAAT+AGG - chr3_1:43130656-43130675 Msa0358340:CDS 40.0%
CTGTGCCTGCTTGAAAATAA+TGG - chr3_1:43130909-43130928 Msa0358340:intron 40.0%
!! GCACTCCATTATTTTCAAGC+AGG + chr3_1:43130917-43130936 None:intergenic 40.0%
GGTGGTCTTTCTAAATCGAA+AGG - chr3_1:43130957-43130976 Msa0358340:CDS 40.0%
!! GAGTTCATTCTAGCTTTGTC+AGG + chr3_1:43131044-43131063 None:intergenic 40.0%
CTGTGATGACAATGAAGTTG+CGG + chr3_1:43131066-43131085 None:intergenic 40.0%
GAAAAAACGGGGAGTTTGTA+TGG + chr3_1:43131207-43131226 None:intergenic 40.0%
AGTGGCGCACTATTGTTTAT+TGG - chr3_1:43131344-43131363 Msa0358340:CDS 40.0%
GTGGCGCACTATTGTTTATT+GGG - chr3_1:43131345-43131364 Msa0358340:CDS 40.0%
TGGCGCACTATTGTTTATTG+GGG - chr3_1:43131346-43131365 Msa0358340:CDS 40.0%
! AGTTTAGGACAAGTGACAGA+AGG + chr3_1:43131629-43131648 None:intergenic 40.0%
ATCAGTGTCAAATTGAGACC+AGG - chr3_1:43131773-43131792 Msa0358340:intron 40.0%
TCAGTGTCAAATTGAGACCA+GGG - chr3_1:43131774-43131793 Msa0358340:intron 40.0%
TGCAGTAAATGCATGGCAAA+TGG - chr3_1:43131824-43131843 Msa0358340:intron 40.0%
AAATGCATGGCAAATGGTTG+TGG - chr3_1:43131830-43131849 Msa0358340:intron 40.0%
CCTTAGACATAGTGTGATGT+CGG - chr3_1:43131944-43131963 Msa0358340:intron 40.0%
! TCACTTGTTGGCCAGAATTT+GGG + chr3_1:43131998-43132017 None:intergenic 40.0%
TCTAGATGGTTCTTGGAAGT+TGG - chr3_1:43132130-43132149 Msa0358340:CDS 40.0%
CTAGATGGTTCTTGGAAGTT+GGG - chr3_1:43132131-43132150 Msa0358340:CDS 40.0%
TCTCACTGTATGTAGAACAC+TGG - chr3_1:43132624-43132643 Msa0358340:intron 40.0%
CTCACTGTATGTAGAACACT+GGG - chr3_1:43132625-43132644 Msa0358340:intron 40.0%
TCAGGAAACAACAATGGCAT+AGG + chr3_1:43132850-43132869 None:intergenic 40.0%
AGTTAGTACCTCGAGTTCTA+AGG - chr3_1:43132905-43132924 Msa0358340:intron 40.0%
! CAAAACCAGAAGCCATGTTT+TGG - chr3_1:43132986-43133005 Msa0358340:intron 40.0%
CATGATGCTCAACCAAAACA+TGG + chr3_1:43133001-43133020 None:intergenic 40.0%
!!! CATGTTTTGGTTGAGCATCA+TGG - chr3_1:43132999-43133018 Msa0358340:intron 40.0%
TGAGCATCATGGAAACAATC+AGG - chr3_1:43133010-43133029 Msa0358340:intron 40.0%
GAGCATCATGGAAACAATCA+GGG - chr3_1:43133011-43133030 Msa0358340:intron 40.0%
AATCAGGGATCCTTATACCA+TGG - chr3_1:43133026-43133045 Msa0358340:intron 40.0%
!!! CTGCTCAGAGATTTTTTCCA+TGG + chr3_1:43133046-43133065 None:intergenic 40.0%
TTCTATGGAAAAACAGCCAC+AGG + chr3_1:43133122-43133141 None:intergenic 40.0%
! CCTGAAGCTTGATAGTTCTA+TGG + chr3_1:43133137-43133156 None:intergenic 40.0%
CCATAGAACTATCAAGCTTC+AGG - chr3_1:43133134-43133153 Msa0358340:intron 40.0%
AATCCTCTATTTGGATTGCG+GGG - chr3_1:43133215-43133234 Msa0358340:intron 40.0%
TTGCGTGGAAAGAGAATTAG+TGG - chr3_1:43133259-43133278 Msa0358340:intron 40.0%
TGCGTGGAAAGAGAATTAGT+GGG - chr3_1:43133260-43133279 Msa0358340:intron 40.0%
AGATTGCAGGAAGAAAAACG+GGG + chr3_1:43133377-43133396 None:intergenic 40.0%
CAGATTGCAGGAAGAAAAAC+GGG + chr3_1:43133378-43133397 None:intergenic 40.0%
! AGCTTCTTGTTTGATGTCCT+TGG - chr3_1:43133500-43133519 Msa0358340:intron 40.0%
!! TTTTTGGCAGGTTTCCTAGA+TGG + chr3_1:43133719-43133738 None:intergenic 40.0%
!!! GGCAACATGATTTTTTTGGC+AGG + chr3_1:43133731-43133750 None:intergenic 40.0%
AGGAATAAACTGCCCATGAT+GGG + chr3_1:43133871-43133890 None:intergenic 40.0%
CTTGTCAATAAACATGGACC+TGG + chr3_1:43134018-43134037 None:intergenic 40.0%
TTATTGACAAGTTCCTGCTC+TGG - chr3_1:43134027-43134046 Msa0358340:CDS 40.0%
TCCATTTCAGGCAACTAACA+GGG + chr3_1:43134061-43134080 None:intergenic 40.0%
ATCCATTTCAGGCAACTAAC+AGG + chr3_1:43134062-43134081 None:intergenic 40.0%
CAAACTGAAGGATCCATTTC+AGG + chr3_1:43134073-43134092 None:intergenic 40.0%
TGGACTATCTTCAAAAGACC+AGG + chr3_1:43134143-43134162 None:intergenic 40.0%
AATAGCCTTTCGACTTACAC+AGG + chr3_1:43134304-43134323 None:intergenic 40.0%
!!! GCTTTTGACTTGACGATCAT+GGG + chr3_1:43134340-43134359 None:intergenic 40.0%
AAATTGGAAGGGGGTTACTT+GGG + chr3_1:43134389-43134408 None:intergenic 40.0%
TCAGATATAACTGCTGCTCT+TGG - chr3_1:43134528-43134547 Msa0358340:intron 40.0%
ACTAGAGACAATGTCTAAGG+AGG - chr3_1:43134557-43134576 Msa0358340:intron 40.0%
TCCTTGAAGAATCGAATGCA+TGG + chr3_1:43134604-43134623 None:intergenic 40.0%
GGAACTATTGTTGTCCACTT+AGG - chr3_1:43134699-43134718 Msa0358340:intron 40.0%
GGCATTTGTGAGAGCTTATT+TGG + chr3_1:43134960-43134979 None:intergenic 40.0%
AGCGGAACAATTTCTCTATC+TGG + chr3_1:43135026-43135045 None:intergenic 40.0%
TCAACTGAAAGCAAGACCAT+AGG + chr3_1:43135069-43135088 None:intergenic 40.0%
GTAGTAGGGAACTGTAAGTT+AGG + chr3_1:43135160-43135179 None:intergenic 40.0%
TCAGTATCCTTGGTTTCTCA+AGG - chr3_1:43135260-43135279 Msa0358340:CDS 40.0%
CAGTATCCTTGGTTTCTCAA+GGG - chr3_1:43135261-43135280 Msa0358340:CDS 40.0%
AGTATCCTTGGTTTCTCAAG+GGG - chr3_1:43135262-43135281 Msa0358340:CDS 40.0%
TATCTAACAAGCCATACCTC+TGG - chr3_1:43135419-43135438 Msa0358340:intron 40.0%
ATGACAACAATCCAGAGGTA+TGG + chr3_1:43135433-43135452 None:intergenic 40.0%
TACCTCTGGATTGTTGTCAT+TGG - chr3_1:43135433-43135452 Msa0358340:intron 40.0%
GATTGACCCCTCAATGAAAA+AGG + chr3_1:43135541-43135560 None:intergenic 40.0%
ATATTCATCTCACTCCCTCT+CGG - chr3_1:43135564-43135583 Msa0358340:intron 40.0%
AAGAAGGGGTAACAAACTAC+GGG + chr3_1:43135610-43135629 None:intergenic 40.0%
CAAGAAGGGGTAACAAACTA+CGG + chr3_1:43135611-43135630 None:intergenic 40.0%
! TGTGATTGTTTCAGGTAGGT+TGG - chr3_1:43135665-43135684 Msa0358340:intron 40.0%
CAATGGGGAGACAATAGATT+GGG - chr3_1:43135788-43135807 Msa0358340:intron 40.0%
GAGACAATAGATTGGGCATT+TGG - chr3_1:43135795-43135814 Msa0358340:intron 40.0%
! TACATTTTCCAGTTCAGAGG+AGG - chr3_1:43135893-43135912 Msa0358340:intron 40.0%
! ACATTTTCCAGTTCAGAGGA+GGG - chr3_1:43135894-43135913 Msa0358340:intron 40.0%
TCCCTTTCCAGTAAAGAGAA+AGG - chr3_1:43135924-43135943 Msa0358340:intron 40.0%
GCCTTTCTCTTTACTGGAAA+GGG + chr3_1:43135928-43135947 None:intergenic 40.0%
TGCCTTTCTCTTTACTGGAA+AGG + chr3_1:43135929-43135948 None:intergenic 40.0%
!! AAGAGAAAGGCATTAGTGTG+AGG - chr3_1:43135937-43135956 Msa0358340:intron 40.0%
!! AGAGAAAGGCATTAGTGTGA+GGG - chr3_1:43135938-43135957 Msa0358340:intron 40.0%
GCTGGATCAACAATTTCATC+AGG + chr3_1:43135999-43136018 None:intergenic 40.0%
AGTTGCGGCTCTTAGAAAAT+CGG - chr3_1:43136172-43136191 Msa0358340:intron 40.0%
AGAAAATCGGATGATGCTGA+TGG - chr3_1:43136185-43136204 Msa0358340:intron 40.0%
GAAAATCGGATGATGCTGAT+GGG - chr3_1:43136186-43136205 Msa0358340:intron 40.0%
AAAATCGGATGATGCTGATG+GGG - chr3_1:43136187-43136206 Msa0358340:intron 40.0%
!! AAATGCAATTTGTTGTGCCG+TGG - chr3_1:43136271-43136290 Msa0358340:intron 40.0%
TCGGTCAGGACTACAAAAAT+AGG + chr3_1:43136389-43136408 None:intergenic 40.0%
AACGCGAGAATGTATTAGGT+CGG + chr3_1:43136408-43136427 None:intergenic 40.0%
ACCTAATACATTCTCGCGTT+TGG - chr3_1:43136408-43136427 Msa0358340:intron 40.0%
!!! GCTGCATGTTTTAGTTCATC+TGG + chr3_1:43136562-43136581 None:intergenic 40.0%
TCTTACCAGAGCTCTTATTC+AGG - chr3_1:43136588-43136607 Msa0358340:intron 40.0%
CAACAGAAGACAAAAGGCAA+AGG - chr3_1:43136650-43136669 Msa0358340:intron 40.0%
GTGTGTCGAGTGATTCAAAT+GGG + chr3_1:43136702-43136721 None:intergenic 40.0%
AGTGTGTCGAGTGATTCAAA+TGG + chr3_1:43136703-43136722 None:intergenic 40.0%
AAAGAACCTGTATCGCGTTT+GGG + chr3_1:43136832-43136851 None:intergenic 40.0%
AAAAGAACCTGTATCGCGTT+TGG + chr3_1:43136833-43136852 None:intergenic 40.0%
AGTTCCTGGAAAGAGATTTC+AGG - chr3_1:43136916-43136935 Msa0358340:CDS 40.0%
AGTACCTGAAATCTCTTTCC+AGG + chr3_1:43136923-43136942 None:intergenic 40.0%
! TGGAAAGAGATTTCAGGTAC+TGG - chr3_1:43136922-43136941 Msa0358340:CDS 40.0%
ACTTCACTCGAAACCTAATC+AGG - chr3_1:43136981-43137000 Msa0358340:intron 40.0%
TTCCCTTTCTTGACCTGATT+AGG + chr3_1:43136997-43137016 None:intergenic 40.0%
!!! AGGTTTTGTTCAGAAGAAGG+CGG + chr3_1:43137042-43137061 None:intergenic 40.0%
TGTTATGAGAACACTCCATC+AGG + chr3_1:43137062-43137081 None:intergenic 40.0%
ATGAATGCAGCAGCATACAT+GGG + chr3_1:43137090-43137109 None:intergenic 40.0%
! TGGCAGGGATTTTATTGTCT+TGG - chr3_1:43137161-43137180 Msa0358340:CDS 40.0%
! GGCAGGGATTTTATTGTCTT+GGG - chr3_1:43137162-43137181 Msa0358340:CDS 40.0%
! GCAGGGATTTTATTGTCTTG+GGG - chr3_1:43137163-43137182 Msa0358340:CDS 40.0%
CTTAACATATCCAGAAGGGA+AGG + chr3_1:43137258-43137277 None:intergenic 40.0%
!! TAAGATCCAGGTATTGGTTG+AGG - chr3_1:43137274-43137293 Msa0358340:CDS 40.0%
! CTTTTCTCACATATGCTTCC+TGG + chr3_1:43137527-43137546 None:intergenic 40.0%
CAGTAAAGCAGATGATACGT+AGG + chr3_1:43137595-43137614 None:intergenic 40.0%
CTACGTATCATCTGCTTTAC+TGG - chr3_1:43137593-43137612 Msa0358340:CDS 40.0%
GTATCATCTGCTTTACTGGA+AGG - chr3_1:43137597-43137616 Msa0358340:CDS 40.0%
! CCTTGAATGGATTCGCATAT+GGG - chr3_1:43137641-43137660 Msa0358340:CDS 40.0%
TACAATCTCGGCTAGTACTT+CGG - chr3_1:43137798-43137817 Msa0358340:CDS 40.0%
TTTACAACTCCATGCTGAGA+TGG - chr3_1:43138051-43138070 Msa0358340:intron 40.0%
ATGCATCAGAACGAAGAGTA+GGG + chr3_1:43138129-43138148 None:intergenic 40.0%
ATGGGAATTAGTGATCCTAC+TGG - chr3_1:43138179-43138198 Msa0358340:intron 40.0%
! ATCCTACTGGCTATTCTGAA+TGG - chr3_1:43138192-43138211 Msa0358340:intron 40.0%
ATCCATTCAGAATAGCCAGT+AGG + chr3_1:43138197-43138216 None:intergenic 40.0%
GGCGATTGAAGCTGAAACAA+TGG - chr3_1:43129810-43129829 Msa0358340:three_prime_UTR 45.0%
AGAGAAGATTAGGGTCGAGT+GGG + chr3_1:43129957-43129976 None:intergenic 45.0%
GCGAACCTGAGAGAAGATTA+GGG + chr3_1:43129966-43129985 None:intergenic 45.0%
!!! GTTCGCGCTTTTTTAACCCT+AGG - chr3_1:43129980-43129999 Msa0358340:three_prime_UTR 45.0%
TCTCCGAAACCGTCTTGAAA+AGG + chr3_1:43130130-43130149 None:intergenic 45.0%
CTTCAAAGGAACGAGATGAC+TGG - chr3_1:43130378-43130397 Msa0358340:intron 45.0%
!! TGGTGGCGTGTCTTTTATCA+AGG - chr3_1:43130398-43130417 Msa0358340:intron 45.0%
AACAAGAACCTAGCAAGCGT+AGG + chr3_1:43130434-43130453 None:intergenic 45.0%
GCATTCGATGTGAGAAAAGC+AGG + chr3_1:43130519-43130538 None:intergenic 45.0%
CTCCTATTCTGCTGGAGAAA+AGG + chr3_1:43130661-43130680 None:intergenic 45.0%
GATCATCACTCCTATTCTGC+TGG + chr3_1:43130669-43130688 None:intergenic 45.0%
CTCCAGATAGCAAGAGAGTT+TGG - chr3_1:43130936-43130955 Msa0358340:CDS 45.0%
! CACCAAACTCTCTTGCTATC+TGG + chr3_1:43130941-43130960 None:intergenic 45.0%
CAGATAGCAAGAGAGTTTGG+TGG - chr3_1:43130939-43130958 Msa0358340:CDS 45.0%
AAAACGGGGAGTTTGTATGG+AGG + chr3_1:43131204-43131223 None:intergenic 45.0%
!! CTTCTTCAAGGGAGAGTACT+TGG + chr3_1:43131271-43131290 None:intergenic 45.0%
TCTAGTTACCAGCAGAACCA+CGG + chr3_1:43131394-43131413 None:intergenic 45.0%
CCGACATCACACTATGTCTA+AGG + chr3_1:43131947-43131966 None:intergenic 45.0%
! AGTGTGATGTCGGTTGCTTA+AGG - chr3_1:43131954-43131973 Msa0358340:intron 45.0%
! AGAATTTGGGAGGTCGCTTT+AGG + chr3_1:43131985-43132004 None:intergenic 45.0%
TAAAGCGACCTCCCAAATTC+TGG - chr3_1:43131984-43132003 Msa0358340:intron 45.0%
! CTCACTTGTTGGCCAGAATT+TGG + chr3_1:43131999-43132018 None:intergenic 45.0%
AATTCTGGCCAACAAGTGAG+CGG - chr3_1:43131999-43132018 Msa0358340:intron 45.0%
CAGCTCTTCTAGATGGTTCT+TGG - chr3_1:43132123-43132142 Msa0358340:CDS 45.0%
TCGACTCTGTCTTGAGGATT+TGG + chr3_1:43132546-43132565 None:intergenic 45.0%
TCCTCAAGACAGAGTCGATT+AGG - chr3_1:43132548-43132567 Msa0358340:intron 45.0%
! ACCTAATCGACTCTGTCTTG+AGG + chr3_1:43132552-43132571 None:intergenic 45.0%
CTGTATGTAGAACACTGGGT+TGG - chr3_1:43132629-43132648 Msa0358340:intron 45.0%
! TAGAACACTGGGTTGGAAAC+AGG - chr3_1:43132636-43132655 Msa0358340:intron 45.0%
!! GGTTGGAAACAGGAAGCATT+AGG - chr3_1:43132646-43132665 Msa0358340:intron 45.0%
AAGCTACAGAGTTGTGACCA+CGG - chr3_1:43132712-43132731 Msa0358340:intron 45.0%
CTCAACCAAAACATGGCTTC+TGG + chr3_1:43132994-43133013 None:intergenic 45.0%
TTCAAGCATATTGGGTCCTG+TGG - chr3_1:43133103-43133122 Msa0358340:intron 45.0%
ACAGCAGAGTTCATCTTCAC+TGG - chr3_1:43133320-43133339 Msa0358340:intron 45.0%
AAAAACGGGGAAACGGTTGT+GGG + chr3_1:43133364-43133383 None:intergenic 45.0%
CAGGAAGAAAAACGGGGAAA+CGG + chr3_1:43133371-43133390 None:intergenic 45.0%
! GACTTGTGTTCTGAACACCA+TGG - chr3_1:43133443-43133462 Msa0358340:intron 45.0%
! CTTCATCACGCACGTTTTGA+AGG + chr3_1:43133476-43133495 None:intergenic 45.0%
CTTCAAAACGTGCGTGATGA+AGG - chr3_1:43133474-43133493 Msa0358340:intron 45.0%
ATGCGAGTATCAGAGTGCAA+CGG + chr3_1:43133825-43133844 None:intergenic 45.0%
GGAATAAACTGCCCATGATG+GGG + chr3_1:43133870-43133889 None:intergenic 45.0%
GAGGAATAAACTGCCCATGA+TGG + chr3_1:43133872-43133891 None:intergenic 45.0%
TCCCTGTTAGTTGCCTGAAA+TGG - chr3_1:43134057-43134076 Msa0358340:CDS 45.0%
ATTCACGGACAGCAAACTGA+AGG + chr3_1:43134085-43134104 None:intergenic 45.0%
TGTCCTGATATAGACGTGCT+AGG + chr3_1:43134113-43134132 None:intergenic 45.0%
GAAGATAGTCCAACGTCTAC+TGG - chr3_1:43134151-43134170 Msa0358340:CDS 45.0%
CCTTTCGACTTACACAGGTA+AGG + chr3_1:43134299-43134318 None:intergenic 45.0%
CCTTACCTGTGTAAGTCGAA+AGG - chr3_1:43134296-43134315 Msa0358340:intron 45.0%
!!! GGCTTTTGACTTGACGATCA+TGG + chr3_1:43134341-43134360 None:intergenic 45.0%
CAAATTGGAAGGGGGTTACT+TGG + chr3_1:43134390-43134409 None:intergenic 45.0%
GCCATGCATTCGATTCTTCA+AGG - chr3_1:43134600-43134619 Msa0358340:intron 45.0%
GATCGCAAGAAGGACTTTGT+GGG - chr3_1:43134673-43134692 Msa0358340:intron 45.0%
CAAGAAGGACTTTGTGGGAT+AGG - chr3_1:43134678-43134697 Msa0358340:intron 45.0%
TTACACAAACGCTCCCTAAG+TGG + chr3_1:43134716-43134735 None:intergenic 45.0%
TAGGGAGCAGAAACCATCAT+AGG + chr3_1:43135141-43135160 None:intergenic 45.0%
! GGACCTTTTCTCAGTATCCT+TGG - chr3_1:43135250-43135269 Msa0358340:CDS 45.0%
TGAAACCCCTTGAGAAACCA+AGG + chr3_1:43135270-43135289 None:intergenic 45.0%
AGCCAATGACAACAATCCAG+AGG + chr3_1:43135438-43135457 None:intergenic 45.0%
TGACTGCTGATCTGCAAGAA+GGG + chr3_1:43135625-43135644 None:intergenic 45.0%
CAGCTATCGTCAAGGTACAA+AGG + chr3_1:43135768-43135787 None:intergenic 45.0%
TACCTTGACGATAGCTGCAA+TGG - chr3_1:43135771-43135790 Msa0358340:intron 45.0%
ACCTTGACGATAGCTGCAAT+GGG - chr3_1:43135772-43135791 Msa0358340:intron 45.0%
GCAATGGGGAGACAATAGAT+TGG - chr3_1:43135787-43135806 Msa0358340:intron 45.0%
GATTCACTGACCCCAAGAAA+CGG - chr3_1:43135817-43135836 Msa0358340:intron 45.0%
!! CAACTAAAAGGTGCTCTGAG+AGG + chr3_1:43136223-43136242 None:intergenic 45.0%
GAGAATGTATTAGGTCGGTC+AGG + chr3_1:43136403-43136422 None:intergenic 45.0%
GCCAAACGCGAGAATGTATT+AGG + chr3_1:43136412-43136431 None:intergenic 45.0%
ACGAACCTGAATAAGAGCTC+TGG + chr3_1:43136596-43136615 None:intergenic 45.0%
ATGAAACCCAAACGCGATAC+AGG - chr3_1:43136823-43136842 Msa0358340:CDS 45.0%
TTGTTTCAGATACCCGACCT+TGG - chr3_1:43136860-43136879 Msa0358340:CDS 45.0%
ATTGGTCAAACAGCTACGAG+AGG - chr3_1:43136956-43136975 Msa0358340:CDS 45.0%
TTGGTCAAACAGCTACGAGA+GGG - chr3_1:43136957-43136976 Msa0358340:CDS 45.0%
CATGAATGCAGCAGCATACA+TGG + chr3_1:43137091-43137110 None:intergenic 45.0%
TTATCATAACCCTCCATGGC+AGG + chr3_1:43137117-43137136 None:intergenic 45.0%
CTAATGCCTCAACCAATACC+TGG + chr3_1:43137283-43137302 None:intergenic 45.0%
TCACATATGCTTCCTGGTGA+TGG + chr3_1:43137521-43137540 None:intergenic 45.0%
ATGTGCATGCAGCTGCAAAA+AGG + chr3_1:43137554-43137573 None:intergenic 45.0%
! TTTTGCAGCTGCATGCACAT+TGG - chr3_1:43137554-43137573 Msa0358340:CDS 45.0%
TGATACGTAGGCAGGATGAA+GGG + chr3_1:43137583-43137602 None:intergenic 45.0%
ATGATACGTAGGCAGGATGA+AGG + chr3_1:43137584-43137603 None:intergenic 45.0%
AAAGCAGATGATACGTAGGC+AGG + chr3_1:43137591-43137610 None:intergenic 45.0%
! GCCTTGAATGGATTCGCATA+TGG - chr3_1:43137640-43137659 Msa0358340:CDS 45.0%
CCCATATGCGAATCCATTCA+AGG + chr3_1:43137644-43137663 None:intergenic 45.0%
GTCTGAGTCAGCTACATCAA+GGG + chr3_1:43137667-43137686 None:intergenic 45.0%
TGTCTGAGTCAGCTACATCA+AGG + chr3_1:43137668-43137687 None:intergenic 45.0%
ATATCATGATAGGGGTGGGT+TGG - chr3_1:43137909-43137928 Msa0358340:intron 45.0%
! TATCATGATAGGGGTGGGTT+GGG - chr3_1:43137910-43137929 Msa0358340:intron 45.0%
TTTGAAGAGCCATCTCAGCA+TGG + chr3_1:43138063-43138082 None:intergenic 45.0%
GATGCATCAGAACGAAGAGT+AGG + chr3_1:43138130-43138149 None:intergenic 45.0%
!! TTATATTATAAATTAATCAT+AGG + chr3_1:43132690-43132709 None:intergenic 5.0%
!! ATAAATAAATAAATAAAAAG+AGG + chr3_1:43133891-43133910 None:intergenic 5.0%
TGGGAAAAGAAGAGTGGCGA+TGG + chr3_1:43129938-43129957 None:intergenic 50.0%
GTCGAGTGGGAAAAGAAGAG+TGG + chr3_1:43129944-43129963 None:intergenic 50.0%
GAGAGAAGATTAGGGTCGAG+TGG + chr3_1:43129958-43129977 None:intergenic 50.0%
CTCGACCCTAATCTTCTCTC+AGG - chr3_1:43129958-43129977 Msa0358340:three_prime_UTR 50.0%
CGCGAACCTGAGAGAAGATT+AGG + chr3_1:43129967-43129986 None:intergenic 50.0%
CAAAGGAACGAGATGACTGG+TGG - chr3_1:43130381-43130400 Msa0358340:intron 50.0%
CTAGCAAGCGTAGGAAAAGC+AGG + chr3_1:43130425-43130444 None:intergenic 50.0%
!! CTGCTTTTCCTACGCTTGCT+AGG - chr3_1:43130423-43130442 Msa0358340:intron 50.0%
AGTTGGAGGCAACATCTGCA+GGG + chr3_1:43130546-43130565 None:intergenic 50.0%
TGTTCACGGATTTGTCACCG+AGG - chr3_1:43130618-43130637 Msa0358340:CDS 50.0%
! CACCGAGGTGTTACAGATAC+TGG - chr3_1:43130633-43130652 Msa0358340:CDS 50.0%
CTTGTTGGCCAGAATTTGGG+AGG + chr3_1:43131995-43132014 None:intergenic 50.0%
TTCTTGGAAGTTGGGTGCAG+AGG - chr3_1:43132139-43132158 Msa0358340:CDS 50.0%
CGGTGACTTTGCCGAAATCA+CGG - chr3_1:43132764-43132783 Msa0358340:intron 50.0%
TTGACGAGCCTTAGAACTCG+AGG + chr3_1:43132916-43132935 None:intergenic 50.0%
TCAAGCTTCAGGCTTCTGTC+AGG - chr3_1:43133145-43133164 Msa0358340:intron 50.0%
CTTCCCCGCAATCCAAATAG+AGG + chr3_1:43133221-43133240 None:intergenic 50.0%
GATGAACTCTGCTGTGCTTG+TGG + chr3_1:43133315-43133334 None:intergenic 50.0%
GAAAAACGGGGAAACGGTTG+TGG + chr3_1:43133365-43133384 None:intergenic 50.0%
! TGACAAGTTCCTGCTCTGGA+AGG - chr3_1:43134031-43134050 Msa0358340:CDS 50.0%
CTGATATAGACGTGCTAGGC+GGG + chr3_1:43134109-43134128 None:intergenic 50.0%
CCTGATATAGACGTGCTAGG+CGG + chr3_1:43134110-43134129 None:intergenic 50.0%
TCCAACGTCTACTGGCAACA+TGG - chr3_1:43134159-43134178 Msa0358340:CDS 50.0%
ACCATGTTGCCAGTAGACGT+TGG + chr3_1:43134163-43134182 None:intergenic 50.0%
! TTGACTTGACGATCATGGGC+TGG + chr3_1:43134336-43134355 None:intergenic 50.0%
CCATGGCATGACAGCAAAGT+AGG + chr3_1:43134362-43134381 None:intergenic 50.0%
! CCTACTTTGCTGTCATGCCA+TGG - chr3_1:43134359-43134378 Msa0358340:intron 50.0%
GGATCGCAAGAAGGACTTTG+TGG - chr3_1:43134672-43134691 Msa0358340:intron 50.0%
GACTGCTGATCTGCAAGAAG+GGG + chr3_1:43135624-43135643 None:intergenic 50.0%
CTGACTGCTGATCTGCAAGA+AGG + chr3_1:43135626-43135645 None:intergenic 50.0%
CCTTGACGATAGCTGCAATG+GGG - chr3_1:43135773-43135792 Msa0358340:intron 50.0%
CAGTCAGTGTCCGTTTCTTG+GGG + chr3_1:43135830-43135849 None:intergenic 50.0%
GCAGTCAGTGTCCGTTTCTT+GGG + chr3_1:43135831-43135850 None:intergenic 50.0%
AGCAGTCAGTGTCCGTTTCT+TGG + chr3_1:43135832-43135851 None:intergenic 50.0%
GGTGGAAAGAGCTCTTGATG+TGG - chr3_1:43136513-43136532 Msa0358340:intron 50.0%
GGAAAGAGCTCTTGATGTGG+CGG - chr3_1:43136516-43136535 Msa0358340:intron 50.0%
!! GCAAAGGGCATTAGTTGCCT+TGG - chr3_1:43136666-43136685 Msa0358340:intron 50.0%
! AAATGGGCTCATGACTGCCA+AGG + chr3_1:43136686-43136705 None:intergenic 50.0%
TGTCATGACAGAAGCAGCTC+AGG - chr3_1:43136780-43136799 Msa0358340:intron 50.0%
TGCTAGGCAAGAACCAAGGT+CGG + chr3_1:43136876-43136895 None:intergenic 50.0%
TCTTTCCAGGAACTAGCTCC+AGG + chr3_1:43136910-43136929 None:intergenic 50.0%
AGAAAGGGAAAACACGCCGT+TGG - chr3_1:43137007-43137026 Msa0358340:intron 50.0%
TGCATTCATGCTTCCTGCCA+TGG - chr3_1:43137101-43137120 Msa0358340:intron 50.0%
ATTCATGCTTCCTGCCATGG+AGG - chr3_1:43137104-43137123 Msa0358340:intron 50.0%
TTCATGCTTCCTGCCATGGA+GGG - chr3_1:43137105-43137124 Msa0358340:intron 50.0%
!! AGGCATGGTGTTGACTTGCT+TGG - chr3_1:43137141-43137160 Msa0358340:CDS 50.0%
!! ATGGTGTTGACTTGCTTGGC+AGG - chr3_1:43137145-43137164 Msa0358340:CDS 50.0%
!! TGGTGTTGACTTGCTTGGCA+GGG - chr3_1:43137146-43137165 Msa0358340:CDS 50.0%
GCGAATCCATTCAAGGCCAT+TGG + chr3_1:43137637-43137656 None:intergenic 50.0%
AGTCAGCCAGAAGTTCATCC+AGG - chr3_1:43138098-43138117 Msa0358340:intron 50.0%
GTCAGCCAGAAGTTCATCCA+GGG - chr3_1:43138099-43138118 Msa0358340:intron 50.0%
GATTGCCCTGGATGAACTTC+TGG + chr3_1:43138107-43138126 None:intergenic 50.0%
CAGTTGGAGGCAACATCTGC+AGG + chr3_1:43130547-43130566 None:intergenic 55.0%
CTGCAGATGTTGCCTCCAAC+TGG - chr3_1:43130545-43130564 Msa0358340:CDS 55.0%
AGATGTTGCCTCCAACTGGC+TGG - chr3_1:43130549-43130568 Msa0358340:CDS 55.0%
GAAACAAGCCAGCCAGTTGG+AGG + chr3_1:43130560-43130579 None:intergenic 55.0%
! TTTTCTCGCATCTGTCGCCG+TGG - chr3_1:43131374-43131393 Msa0358340:CDS 55.0%
! TATGGGCACCGCTCACTTGT+TGG + chr3_1:43132010-43132029 None:intergenic 55.0%
CTACAGAGTTGTGACCACGG+TGG - chr3_1:43132715-43132734 Msa0358340:intron 55.0%
GTTGTGACCACGGTGGCATT+AGG - chr3_1:43132722-43132741 Msa0358340:intron 55.0%
TGAACAGCCTAATGCCACCG+TGG + chr3_1:43132732-43132751 None:intergenic 55.0%
TCACGGTGGCTCCGTGATTT+CGG + chr3_1:43132778-43132797 None:intergenic 55.0%
TCAGGCTTCTGTCAGGTGAG+TGG - chr3_1:43133152-43133171 Msa0358340:intron 55.0%
AGAGATGGGTCTGGCCATCT+AGG - chr3_1:43133702-43133721 Msa0358340:intron 55.0%
ATAGGAGGACAGCCCCATCA+TGG - chr3_1:43133855-43133874 Msa0358340:intron 55.0%
TAGGAGGACAGCCCCATCAT+GGG - chr3_1:43133856-43133875 Msa0358340:intron 55.0%
CAGGGAATACCTTCCAGAGC+AGG + chr3_1:43134043-43134062 None:intergenic 55.0%
CCGCCTAGCACGTCTATATC+AGG - chr3_1:43134107-43134126 Msa0358340:CDS 55.0%
!! ACTTGACGATCATGGGCTGG+AGG + chr3_1:43134333-43134352 None:intergenic 55.0%
CCCCATTGCAGCTATCGTCA+AGG + chr3_1:43135776-43135795 None:intergenic 55.0%
ATCAGAGCCCTCCTCTGAAC+TGG + chr3_1:43135904-43135923 None:intergenic 55.0%
GCTAGGCAAGAACCAAGGTC+GGG + chr3_1:43136875-43136894 None:intergenic 55.0%
GAGCTGCTAGGCAAGAACCA+AGG + chr3_1:43136880-43136899 None:intergenic 55.0%
TGGTTCTTGCCTAGCAGCTC+AGG - chr3_1:43136880-43136899 Msa0358340:CDS 55.0%
GGTTCTTGCCTAGCAGCTCA+GGG - chr3_1:43136881-43136900 Msa0358340:CDS 55.0%
GTTCAGAAGAAGGCGGTCTC+AGG + chr3_1:43137035-43137054 None:intergenic 55.0%
CACAGACGCTTCTGGATGCA+TGG + chr3_1:43137229-43137248 None:intergenic 55.0%
CAGGGAGTTATGCCATCACC+AGG - chr3_1:43137506-43137525 Msa0358340:CDS 55.0%
ACGAAGAGTAGGGATTGCCC+TGG + chr3_1:43138119-43138138 None:intergenic 55.0%
GGGGAAACAAGCCAGCCAGT+TGG + chr3_1:43130563-43130582 None:intergenic 60.0%
! ATCTGTCGCCGTGGTTCTGC+TGG - chr3_1:43131383-43131402 Msa0358340:CDS 60.0%
AACGGGGAAACGGTTGTGGG+AGG + chr3_1:43133361-43133380 None:intergenic 60.0%
ACGTGCTAGGCGGGCATTCA+CGG + chr3_1:43134100-43134119 None:intergenic 60.0%
GGGGTTACTTGGGTGAGCCA+TGG + chr3_1:43134379-43134398 None:intergenic 60.0%
GGACTCCTGGAGCTAGTTCC+TGG - chr3_1:43136902-43136921 Msa0358340:CDS 60.0%
AAGGCGGTCTCAGGCTCCAA+CGG + chr3_1:43137026-43137045 None:intergenic 60.0%
!! GCATCCAGAAGCGTCTGTGC+TGG - chr3_1:43137230-43137249 Msa0358340:CDS 60.0%
!! TGTGCTGGCTCCTTCCCTTC+TGG - chr3_1:43137245-43137264 Msa0358340:CDS 60.0%
!! TAGGGGTGGGTTGGGTTGCA+TGG - chr3_1:43137918-43137937 Msa0358340:intron 60.0%
! TGGGTTGGGTTGCATGGCTC+TGG - chr3_1:43137924-43137943 Msa0358340:intron 60.0%
TCTTCAAACCTCCCGAGCGC+TGG - chr3_1:43138075-43138094 Msa0358340:intron 60.0%
! TTCTGGCTGACTCCAGCGCT+CGG + chr3_1:43138090-43138109 None:intergenic 60.0%
CCAGGAGTCCCTGAGCTGCT+AGG + chr3_1:43136892-43136911 None:intergenic 65.0%
CCTAGCAGCTCAGGGACTCC+TGG - chr3_1:43136889-43136908 Msa0358340:CDS 65.0%
GGAGCCAGCACAGACGCTTC+TGG + chr3_1:43137237-43137256 None:intergenic 65.0%
! TCTGGCTGACTCCAGCGCTC+GGG + chr3_1:43138089-43138108 None:intergenic 65.0%
! GGCTGACTCCAGCGCTCGGG+AGG + chr3_1:43138086-43138105 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 43129786 43138428 43129786 ID=Msa0358340;Name=Msa0358340
chr3_1 mRNA 43129786 43138428 43129786 ID=Msa0358340-mRNA-1;Parent=Msa0358340;Name=Msa0358340-mRNA-1;_AED=0.18;_eAED=0.19;_QI=43|0.83|0.76|1|0.83|0.76|13|239|1015
chr3_1 exon 43129786 43130177 43129786 ID=Msa0358340-mRNA-1:exon:7636;Parent=Msa0358340-mRNA-1
chr3_1 exon 43130507 43130705 43130507 ID=Msa0358340-mRNA-1:exon:7635;Parent=Msa0358340-mRNA-1
chr3_1 exon 43130931 43131700 43130931 ID=Msa0358340-mRNA-1:exon:7634;Parent=Msa0358340-mRNA-1
chr3_1 exon 43132006 43132535 43132006 ID=Msa0358340-mRNA-1:exon:7633;Parent=Msa0358340-mRNA-1
chr3_1 exon 43133584 43133682 43133584 ID=Msa0358340-mRNA-1:exon:7632;Parent=Msa0358340-mRNA-1
chr3_1 exon 43133987 43134195 43133987 ID=Msa0358340-mRNA-1:exon:7631;Parent=Msa0358340-mRNA-1
chr3_1 exon 43135048 43135324 43135048 ID=Msa0358340-mRNA-1:exon:7630;Parent=Msa0358340-mRNA-1
chr3_1 exon 43136810 43136979 43136810 ID=Msa0358340-mRNA-1:exon:7629;Parent=Msa0358340-mRNA-1
chr3_1 exon 43137106 43137315 43137106 ID=Msa0358340-mRNA-1:exon:7628;Parent=Msa0358340-mRNA-1
chr3_1 exon 43137492 43137663 43137492 ID=Msa0358340-mRNA-1:exon:7627;Parent=Msa0358340-mRNA-1
chr3_1 exon 43137756 43137858 43137756 ID=Msa0358340-mRNA-1:exon:7626;Parent=Msa0358340-mRNA-1
chr3_1 exon 43138150 43138154 43138150 ID=Msa0358340-mRNA-1:exon:7625;Parent=Msa0358340-mRNA-1
chr3_1 exon 43138235 43138428 43138235 ID=Msa0358340-mRNA-1:exon:7624;Parent=Msa0358340-mRNA-1
chr3_1 five_prime_UTR 43138386 43138428 43138386 ID=Msa0358340-mRNA-1:five_prime_utr;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43138235 43138385 43138235 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43138150 43138154 43138150 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43137756 43137858 43137756 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43137492 43137663 43137492 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43137106 43137315 43137106 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43136810 43136979 43136810 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43135048 43135324 43135048 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43133987 43134195 43133987 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43133584 43133682 43133584 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43132006 43132535 43132006 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43130931 43131700 43130931 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43130507 43130705 43130507 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 CDS 43130025 43130177 43130025 ID=Msa0358340-mRNA-1:cds;Parent=Msa0358340-mRNA-1
chr3_1 three_prime_UTR 43129786 43130024 43129786 ID=Msa0358340-mRNA-1:three_prime_utr;Parent=Msa0358340-mRNA-1
Gene Sequence

>Msa0358340

ATGGAGAAGAAAGAATTGGAAGATAGAGTAGTTAACAAAGTTGCAGAAGTAATATCAGCTATAAAGAACGCCAAGCACGTTGATCATGTCATTTCTTCTCTTCACTCCATCGCCACTCTTCTTTTCCCACTCGACCCTAATCTTCTCTCAGGCAGTATTTTAACTGTAAAGCTTCCTTCTTCAAAGGAACGAGATGACTGGTGGCGTGTCTTTTATCAAGGACCTGCTTTTCCTACGCTTGCTAGGTTCTTGTTACTTGATGTTGCCTCCAACTGGCTGGCTTGTTTCCCCTTCTCAGCTCAGAAATATGTTTATGATGTTTTCTTTGTTCACGGATTTGTCACCGAGGTGTTACAGATACTGGTTCCTTTTCTCCAGCAGAATAGGAGTGATGATCTTGATATTAATGTTGTGATCTCAAATTCTGAAAGATTGCTTGTACTGTGCCTGCTTGAAAATAATGGAGTGCTCCAGATAGCAAGAGAGTTTGGTGGTCTTTCTAAATCGAAAGGTTTTACCGATGAACAGATGAAACCAGATATATCTAGAATGGCACAGATTGTTGCATCTATTCCTGACAAAGCTAGAATGAACTCCGCAACTTCATTGTCATCACAGTATCCTTTTGCTCCCTTTTGTTATATTTTCAGTTTATTCTTCAGGCAGATTATTGTCCAAGTACTCTCCCTTGAAGAAGAAAGAGAAGTGATTTTGATAGAAAAGATAGAAACCTCAGATGAAATGGACAAAAGTGGCGCACTATTGTTTATTGGGGAAATGTTTTCTCGCATCTGTCGCCGTGGTTCTGCTGATCTTCTATCAAGTGAGTTAGTACCTCGAGTTCTAAGGCTCGTCAACAGCTGCTTATCATCAAGTAACAATTCTATTAATGAGGAAGTGCTTGAGTCAAAACCAGAAGCCATGTTTTGGTTGAGCATCATGGAAACAATCAGGGATCCTTATACCATGGAAAAAATCTCTGAGCAGATTTTGCATGAGCTAGCAAGTCAACAAGCAAATGATGTTCAAGCATATTGGGTCCTGTGGCTGTTTTTCCATAGAACTATCAAGCTTCAGGCTTCTGTCAGGTCCATGTTTATTGACAAGTTCCTGCTCTGGAAGGTATTCCCTGTTAGTTGCCTGAAATGGATCCTTCAGTTTGCTGTCCGTGAATGCCCGCCTAGCACGTCTATATCAGGACATAATTGTCCTGGTCTTTTGAAGATAGTCCAACGTCTACTGGCAACATGGTCTAAGAAAGAATTTGTGCAAACAGCACCTATTGAGCAACAAGCTTATATAACTGCTGCTCTTGGCCTTTCACTAGAGACAATGTCTAAGGAGGAATTGGATAGGATGAAGGATGCCATGCATTCGATTCTTCAAGGAGTTAGCTGTAGGTTGGAGAGTCCTAATCATTTAGTTCGAAAAATGGCTAGTAATATTGCTTTGGCGTTGTCTAAAATTATTGATCCAAAAAATCCTTTGTACCTTGACGATAGCTGCAATGGGGAGACAATAGATTGGGCATTTGGATTCACTGACCCCAAGAAACGGACACTGACTGCTTCAAATTCTAGAAAAAAAGGTGTTGAGGAAATACAGATATCTACATTTTCCAGTTCAGAGGAGGGCTCTGATTCCCTTTCCAGTAAAGAGAAAGGCATTAGTGTGAGGGATAAAAAGAAGTTATTGGACTTTAACGTGCTTGATCCTGATGAAATTGTTGATCCAGCATCACTGAATCTTGAATTAGATATTAATGATGAGGATAATGATGATAGTGCAAGTGAGAACTCATGTTCCTCAGATGATTCATCTTTACAGCCGTATGATTTGTCAGATGATGACTCGGATTTGAAAAAAACAATTTCACAGTTATCTGATGTAGTTGCGGCTCTTAGAAAATCGGATGATGCTGATGGGGTGGAAAGAGCTCTTGATGTGGCGGAAAAGCTCATAAGAGCATCCCCAGATGAACTAAAACATGCAGCAAGGGATCTTACCAGAGCTCTTATTCAGGTTCGTTGCTGTGATATAGCTTTAGAAGGTGAAGAAGAATCAACAGAAGACAAAAGGCAAAGGGCATTAGTTGCCTTGGCAGTCATGAGCCCATTTGAATCACTCGACACACTGCACAATCTTTTGTATTCACCTAATGTAGATATTAGTCAACGAATAATGATACTGGATGTCATGACAGAAGCAGCTCAGGAGCTTGCTGATTCAAAAATTATGAAACCCAAACGCGATACAGGTTCTTTTGTATCAGTTGTTTCAGATACCCGACCTTGGTTCTTGCCTAGCAGCTCAGGGACTCCTGGAGCTAGTTCCTGGAAAGAGATTTCAGGTACTGGAACTTTTTTGAATTGGTCAAACAGCTACGAGAGGGAACTTCACTCGAAACCTAATCAGGTCAAGAAAGGGAAAACACGCCGTTGGAGCCTGAGACCGCCTTCTTCTGAACAAAACCTGATGGAGTGTTCTCATAACAAGTTTCCCATGTATGCTGCTGCATTCATGCTTCCTGCCATGGAGGGTTATGATAAAAAAAGGCATGGTGTTGACTTGCTTGGCAGGGATTTTATTGTCTTGGGGAAACTCATTTATATGCTTGGGGTTTGTATGAAATCTGCAGCCATGCATCCAGAAGCGTCTGTGCTGGCTCCTTCCCTTCTGGATATGTTAAGATCCAGGGAGTTATGCCATCACCAGGAAGCATATGTGAGAAAAGCTGTCCTTTTTGCAGCTGCATGCACATTGGTTGCCCTTCATCCTGCCTACGTATCATCTGCTTTACTGGAAGGAAACGTTGAAATTTCCAATGGCCTTGAATGGATTCGCATATGGGCCCTTGATGTAGCTGACTCAGACACAGATAAAGAATGCTATACGATGGCTATGACGTGTTTACAACTCCATGCTGAGATGGCTCTTCAAACCTCCCGAGCGCTGGAGTCAGCCAGAAGTTCATCCAGGGCAATCCCTACTCTTCGTTCTGATGCATCCAAAATGACCATTAAAATTCCCTACTTAAATGGGAATTAG
Protein sequence

>Msa0358340

MEKKELEDRVVNKVAEVISAIKNAKHVDHVISSLHSIATLLFPLDPNLLSGSILTVKLPSSKERDDWWRVFYQGPAFPTLARFLLLDVASNWLACFPFSAQKYVYDVFFVHGFVTEVLQILVPFLQQNRSDDLDINVVISNSERLLVLCLLENNGVLQIAREFGGLSKSKGFTDEQMKPDISRMAQIVASIPDKARMNSATSLSSQYPFAPFCYIFSLFFRQIIVQVLSLEEEREVILIEKIETSDEMDKSGALLFIGEMFSRICRRGSADLLSSELVPRVLRLVNSCLSSSNNSINEEVLESKPEAMFWLSIMETIRDPYTMEKISEQILHELASQQANDVQAYWVLWLFFHRTIKLQASVRSMFIDKFLLWKVFPVSCLKWILQFAVRECPPSTSISGHNCPGLLKIVQRLLATWSKKEFVQTAPIEQQAYITAALGLSLETMSKEELDRMKDAMHSILQGVSCRLESPNHLVRKMASNIALALSKIIDPKNPLYLDDSCNGETIDWAFGFTDPKKRTLTASNSRKKGVEEIQISTFSSSEEGSDSLSSKEKGISVRDKKKLLDFNVLDPDEIVDPASLNLELDINDEDNDDSASENSCSSDDSSLQPYDLSDDDSDLKKTISQLSDVVAALRKSDDADGVERALDVAEKLIRASPDELKHAARDLTRALIQVRCCDIALEGEEESTEDKRQRALVALAVMSPFESLDTLHNLLYSPNVDISQRIMILDVMTEAAQELADSKIMKPKRDTGSFVSVVSDTRPWFLPSSSGTPGASSWKEISGTGTFLNWSNSYERELHSKPNQVKKGKTRRWSLRPPSSEQNLMECSHNKFPMYAAAFMLPAMEGYDKKRHGVDLLGRDFIVLGKLIYMLGVCMKSAAMHPEASVLAPSLLDMLRSRELCHHQEAYVRKAVLFAAACTLVALHPAYVSSALLEGNVEISNGLEWIRIWALDVADSDTDKECYTMAMTCLQLHAEMALQTSRALESARSSSRAIPTLRSDASKMTIKIPYLNGN*