AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0362330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0362330 MtrunA17_Chr3g0101321 80.723 913 55 13 19 810 1 913 0.0 1411
Msa0362330 MtrunA17_Chr3g0112511 53.855 921 283 19 19 810 1 908 0.0 843
Msa0362330 MtrunA17_Chr3g0100831 50.546 916 312 20 19 803 1 906 0.0 803
Msa0362330 MtrunA17_Chr3g0101331 52.150 907 283 21 19 776 1 905 0.0 800
Msa0362330 MtrunA17_Chr1g0189351 51.220 902 293 21 19 776 1 899 0.0 782
Msa0362330 MtrunA17_Chr3g0100961 50.164 913 313 22 19 800 1 902 0.0 769
Msa0362330 MtrunA17_Chr3g0100801 50.858 816 243 18 22 724 1 771 0.0 699
Msa0362330 MtrunA17_Chr3g0101271 45.973 894 336 17 39 801 8 885 0.0 682
Msa0362330 MtrunA17_Chr3g0101241 45.973 894 336 17 39 801 8 885 0.0 681
Msa0362330 MtrunA17_Chr3g0080601 44.432 925 366 21 19 800 1 920 0.0 679
Msa0362330 MtrunA17_Chr3g0100971 52.374 737 223 14 19 631 1 733 0.0 675
Msa0362330 MtrunA17_Chr3g0080771 44.073 928 369 23 19 802 1 922 0.0 672
Msa0362330 MtrunA17_Chr3g0080741 42.612 934 387 19 19 807 1 930 0.0 667
Msa0362330 MtrunA17_Chr3g0101201 45.824 934 347 28 11 802 4 920 0.0 665
Msa0362330 MtrunA17_Chr3g0080791 43.905 927 372 22 19 802 1 922 0.0 662
Msa0362330 MtrunA17_Chr3g0094301 43.629 926 373 20 19 800 1 921 0.0 652
Msa0362330 MtrunA17_Chr7g0229761 43.629 926 373 20 19 800 1 921 0.0 652
Msa0362330 MtrunA17_Chr3g0100851 48.852 784 283 15 126 796 1 779 0.0 648
Msa0362330 MtrunA17_Chr3g0101221 44.649 925 360 24 23 803 7 923 0.0 647
Msa0362330 MtrunA17_Chr3g0080631 43.556 900 380 20 19 807 1 883 0.0 640
Msa0362330 MtrunA17_Chr3g0100761 50.546 732 204 13 19 631 1 693 0.0 637
Msa0362330 MtrunA17_Chr3g0080751 42.473 930 385 22 19 803 1 925 0.0 637
Msa0362330 MtrunA17_Chr3g0101231 44.278 935 363 24 16 803 6 929 0.0 625
Msa0362330 MtrunA17_Chr3g0101251 44.224 909 353 22 19 801 1 881 0.0 623
Msa0362330 MtrunA17_Chr1g0151481 42.021 940 390 25 19 811 1 932 0.0 619
Msa0362330 MtrunA17_Chr3g0080731 41.935 930 383 20 19 800 1 921 0.0 617
Msa0362330 MtrunA17_Chr3g0081211 42.145 923 390 23 19 800 1 920 0.0 606
Msa0362330 MtrunA17_Chr3g0101011 41.427 939 385 27 19 800 1 931 0.0 604
Msa0362330 MtrunA17_Chr3g0101181 44.605 899 342 24 40 791 32 921 0.0 598
Msa0362330 MtrunA17_Chr3g0081391 41.234 924 398 21 19 800 1 921 0.0 596
Msa0362330 MtrunA17_Chr3g0081341 41.297 925 397 22 19 801 66 986 0.0 581
Msa0362330 MtrunA17_Chr3g0081191 39.957 931 410 23 19 807 1 924 0.0 578
Msa0362330 MtrunA17_Chr3g0081361 39.831 944 413 24 19 812 1 939 0.0 558
Msa0362330 MtrunA17_Chr3g0081371 40.086 933 404 25 19 801 1 928 0.0 550
Msa0362330 MtrunA17_Chr3g0080651 40.268 894 367 23 16 800 1 836 0.0 546
Msa0362330 MtrunA17_Chr3g0100731 47.697 673 234 14 244 804 1 667 2.03e-178 529
Msa0362330 MtrunA17_Chr3g0081181 39.231 910 420 17 19 800 1 905 3.02e-178 537
Msa0362330 MtrunA17_Chr3g0100681 48.893 587 186 11 192 669 1 582 4.95e-163 486
Msa0362330 MtrunA17_Chr3g0101391 47.304 575 212 12 293 777 5 578 2.14e-151 456
Msa0362330 MtrunA17_Chr5g0410001 34.509 936 451 31 19 810 1 918 3.06e-145 452
Msa0362330 MtrunA17_Chr5g0410031 34.931 939 448 31 19 810 1 923 6.87e-139 435
Msa0362330 MtrunA17_Chr3g0080721 40.152 660 272 13 258 800 4 657 1.70e-137 424
Msa0362330 MtrunA17_Chr5g0409991 33.906 932 458 27 19 810 1 914 4.83e-134 422
Msa0362330 MtrunA17_Chr5g0410021 34.022 920 453 26 19 800 1 904 3.05e-133 420
Msa0362330 MtrunA17_Chr5g0409971 33.803 923 454 28 19 800 1 907 5.71e-131 414
Msa0362330 MtrunA17_Chr3g0100781 57.713 376 104 10 19 343 1 372 9.84e-128 387
Msa0362330 MtrunA17_Chr3g0084351 43.942 553 205 12 88 537 4 554 1.35e-127 394
Msa0362330 MtrunA17_Chr1g0149071 42.778 540 177 11 231 726 1 452 1.57e-112 351
Msa0362330 MtrunA17_Chr3g0100701 48.164 463 183 10 388 803 284 736 1.19e-111 358
Msa0362330 MtrunA17_Chr3g0100701 58.865 282 92 6 19 276 1 282 9.36e-93 308
Msa0362330 MtrunA17_Chr5g0444301 49.775 444 174 7 378 772 1 444 3.52e-105 331
Msa0362330 MtrunA17_Chr3g0101211 47.015 402 128 6 207 526 1 399 6.46e-104 326
Msa0362330 MtrunA17_Chr3g0100791 46.275 443 187 7 400 796 1 438 1.17e-103 328
Msa0362330 MtrunA17_Chr1g0189271 54.062 320 77 5 171 420 4 323 4.91e-102 318
Msa0362330 MtrunA17_Chr3g0101421 57.491 287 96 7 19 279 1 287 5.03e-99 309
Msa0362330 MtrunA17_Chr3g0101361 44.748 476 187 11 399 801 295 767 1.24e-94 313
Msa0362330 MtrunA17_Chr3g0101361 40.203 296 139 11 11 276 4 291 5.47e-49 186
Msa0362330 MtrunA17_Chr5g0404741 30.323 930 477 30 19 801 1 906 7.13e-88 298
Msa0362330 MtrunA17_Chr1g0189281 47.324 355 151 9 448 768 21 373 9.94e-77 253
Msa0362330 MtrunA17_Chr4g0037421 29.095 928 460 33 16 757 35 950 8.60e-73 257
Msa0362330 MtrunA17_Chr7g0219851 26.855 957 506 33 19 803 3 937 1.21e-68 245
Msa0362330 MtrunA17_Chr3g0100721 59.193 223 69 7 19 226 1 216 2.66e-68 225
Msa0362330 MtrunA17_Chr2g0299001 25.789 950 512 34 19 802 1 923 4.97e-66 237
Msa0362330 MtrunA17_Chr3g0081841 37.209 387 139 7 173 506 6 341 1.86e-60 213
Msa0362330 MtrunA17_Chr3g0081841 37.963 108 59 3 598 701 378 481 1.05e-11 68.2
Msa0362330 MtrunA17_Chr3g0100911 52.018 223 89 3 539 744 1 222 1.78e-59 202
Msa0362330 MtrunA17_Chr3g0080701 50.917 218 86 6 19 216 1 217 2.04e-53 185
Msa0362330 MtrunA17_Chr5g0430721 25.027 927 527 32 19 806 42 939 3.39e-52 197
Msa0362330 MtrunA17_Chr1g0189321 49.065 214 77 4 368 551 28 239 1.01e-51 181
Msa0362330 MtrunA17_Chr3g0101341 42.545 275 112 10 41 276 1 268 1.09e-50 179
Msa0362330 MtrunA17_Chr5g0415471 25.711 844 456 35 19 713 1 822 3.22e-50 191
Msa0362330 MtrunA17_Chr3g0084361 45.455 242 109 6 579 800 1 239 8.13e-50 176
Msa0362330 MtrunA17_Chr7g0248221 25.829 875 479 31 37 797 23 841 2.58e-49 187
Msa0362330 MtrunA17_Chr5g0414311 25.388 709 400 23 19 613 1 694 2.55e-48 186
Msa0362330 MtrunA17_Chr6g0467961 26.667 675 381 25 19 600 1 654 1.51e-46 179
Msa0362330 MtrunA17_Chr1g0189551 26.466 665 381 24 37 605 51 703 1.28e-44 173
Msa0362330 MtrunA17_Chr3g0082101 28.095 630 335 30 60 593 52 659 2.84e-44 172
Msa0362330 MtrunA17_Chr8g0346831 26.637 672 375 24 22 590 9 665 3.76e-44 172
Msa0362330 MtrunA17_Chr6g0470081 25.313 719 411 24 19 642 1 688 5.03e-44 172
Msa0362330 MtrunA17_Chr7g0257541 25.615 894 471 40 37 797 25 857 7.86e-44 171
Msa0362330 MtrunA17_Chr1g0197241 24.802 883 493 27 44 776 672 1533 6.43e-43 169
Msa0362330 MtrunA17_Chr6g0468021 25.706 673 390 21 19 600 1 654 2.24e-42 167
Msa0362330 MtrunA17_Chr3g0101401 49.457 184 70 6 100 260 1 184 4.18e-42 152
Msa0362330 MtrunA17_Chr3g0091081 26.807 664 354 28 49 601 41 683 6.82e-42 166
Msa0362330 MtrunA17_Chr3g0082881 24.490 833 467 30 19 705 1 817 9.98e-42 164
Msa0362330 MtrunA17_Chr5g0433771 24.169 902 497 31 28 803 14 854 1.51e-41 164
Msa0362330 MtrunA17_Chr5g0430441 25.734 715 366 26 19 607 1 676 1.64e-41 164
Msa0362330 MtrunA17_Chr6g0468151 24.521 730 405 24 19 642 1 690 1.95e-41 164
Msa0362330 MtrunA17_Chr5g0431051 24.490 931 505 36 19 795 1 887 2.12e-41 164
Msa0362330 MtrunA17_Chr3g0123111 24.826 717 412 24 19 642 1 683 3.44e-41 163
Msa0362330 MtrunA17_Chr4g0051651 24.247 664 368 21 12 548 16 671 3.45e-41 161
Msa0362330 MtrunA17_Chr3g0092261 25.882 765 420 34 46 681 83 829 4.27e-41 163
Msa0362330 MtrunA17_Chr5g0430641 25.156 799 420 30 19 679 1 759 5.25e-41 162
Msa0362330 MtrunA17_Chr8g0352831 26.122 735 369 31 58 643 50 759 6.82e-41 162
Msa0362330 MtrunA17_Chr5g0430581 26.415 689 367 26 19 600 1 656 9.04e-41 162
Msa0362330 MtrunA17_Chr3g0090651 27.570 642 322 31 168 681 160 786 9.70e-41 162
Msa0362330 MtrunA17_Chr5g0430621 25.723 657 355 22 19 569 1 630 1.12e-40 161
Msa0362330 MtrunA17_Chr6g0468101 25.436 688 388 25 19 624 1 645 1.31e-40 161
Msa0362330 MtrunA17_Chr7g0257221 25.593 801 434 31 37 700 23 798 1.41e-40 160
Msa0362330 MtrunA17_Chr5g0430951 26.031 703 377 26 19 607 1 674 2.13e-40 160
Msa0362330 MtrunA17_Chr7g0248531 27.972 572 273 22 146 593 124 680 2.17e-40 160
Msa0362330 MtrunA17_Chr7g0244231 25.429 700 379 26 19 607 1 668 2.19e-40 160
Msa0362330 MtrunA17_Chr3g0096971 55.072 138 36 2 259 370 1 138 2.54e-40 146
Msa0362330 MtrunA17_Chr3g0090691 28.493 544 275 22 168 606 160 694 2.83e-40 160
Msa0362330 MtrunA17_Chr5g0414181 25.952 709 380 28 19 611 1 680 2.90e-40 160
Msa0362330 MtrunA17_Chr5g0430141 25.245 713 374 26 19 607 1 678 3.51e-40 160
Msa0362330 MtrunA17_Chr1g0169901 26.712 730 363 31 36 633 34 723 5.45e-40 159
Msa0362330 MtrunA17_Chr6g0470011 24.758 723 410 24 19 642 1 688 9.53e-40 159
Msa0362330 MtrunA17_Chr3g0085561 26.667 555 293 19 173 617 137 687 1.43e-39 158
Msa0362330 MtrunA17_Chr1g0155321 25.926 702 376 25 19 607 1 671 1.47e-39 158
Msa0362330 MtrunA17_Chr3g0082811 26.580 617 330 25 177 679 160 767 1.66e-39 157
Msa0362330 MtrunA17_Chr1g0164611 26.440 677 338 32 60 593 52 711 2.48e-39 157
Msa0362330 MtrunA17_Chr8g0344071 25.655 725 408 23 174 783 444 1152 4.51e-39 157
Msa0362330 MtrunA17_Chr3g0089911 26.252 659 346 27 46 589 38 671 4.56e-39 154
Msa0362330 MtrunA17_Chr3g0091061 28.302 530 262 22 168 592 160 676 4.58e-39 157
Msa0362330 MtrunA17_Chr5g0430291 25.476 683 388 25 19 600 1 663 5.47e-39 156
Msa0362330 MtrunA17_Chr5g0446611 26.746 673 330 30 200 757 197 821 7.01e-39 155
Msa0362330 MtrunA17_Chr5g0414231 26.121 513 275 15 19 446 1 494 8.02e-39 151
Msa0362330 MtrunA17_Chr4g0027251 25.246 812 414 31 19 681 1 768 9.02e-39 155
Msa0362330 MtrunA17_Chr4g0010261 28.679 530 260 19 177 599 161 679 9.18e-39 155
Msa0362330 MtrunA17_Chr6g0467911 24.411 721 415 25 19 642 1 688 1.13e-38 154
Msa0362330 MtrunA17_Chr3g0082871 24.290 704 404 23 19 613 1 684 1.46e-38 153
Msa0362330 MtrunA17_Chr3g0085801 27.110 557 291 20 173 638 170 702 1.62e-38 155
Msa0362330 MtrunA17_Chr7g0257201 25.753 664 349 26 37 575 23 667 1.62e-38 154
Msa0362330 MtrunA17_Chr2g0309721 25.603 746 412 31 52 672 44 771 1.78e-38 155
Msa0362330 MtrunA17_Chr3g0085331 26.316 551 293 18 173 617 168 711 2.93e-38 154
Msa0362330 MtrunA17_Chr2g0282991 28.433 517 229 22 200 592 194 693 3.30e-38 154
Msa0362330 MtrunA17_Chr3g0085451 27.022 544 288 21 173 617 140 673 4.10e-38 154
Msa0362330 MtrunA17_Chr6g0471941 25.339 663 371 24 22 581 9 650 4.10e-38 153
Msa0362330 MtrunA17_Chr3g0089871 25.787 667 343 27 49 592 41 678 5.18e-38 153
Msa0362330 MtrunA17_Chr5g0430511 24.396 787 446 25 19 679 1 764 6.52e-38 153
Msa0362330 MtrunA17_Chr5g0429961 23.454 938 523 32 19 806 1 893 7.23e-38 152
Msa0362330 MtrunA17_Chr3g0089211 25.367 749 401 31 58 672 97 821 7.27e-38 153
Msa0362330 MtrunA17_Chr5g0429951 24.496 694 382 24 19 600 1 664 8.87e-38 152
Msa0362330 MtrunA17_Chr3g0081201 42.105 209 109 5 602 801 2 207 1.05e-37 140
Msa0362330 MtrunA17_Chr3g0089651 25.953 682 355 28 121 672 117 778 1.18e-37 152
Msa0362330 MtrunA17_Chr3g0089251 25.501 749 400 32 58 672 79 803 1.64e-37 152
Msa0362330 MtrunA17_Chr3g0089991 26.351 592 302 21 201 672 201 778 3.45e-37 151
Msa0362330 MtrunA17_Chr6g0468121 25.369 678 389 25 19 600 1 657 5.28e-37 150
Msa0362330 MtrunA17_Chr6g0468451 25.693 685 377 25 19 600 1 656 1.05e-36 149
Msa0362330 MtrunA17_Chr2g0316291 24.550 778 433 31 44 682 30 792 1.05e-36 149
Msa0362330 MtrunA17_Chr8g0338391 25.190 659 369 24 22 576 9 647 1.13e-36 149
Msa0362330 MtrunA17_Chr8g0355411 24.393 783 422 27 18 669 6 749 1.36e-36 148
Msa0362330 MtrunA17_Chr1g0155991 24.786 702 386 24 19 607 1 673 1.64e-36 148
Msa0362330 MtrunA17_Chr3g0085501 26.895 554 286 21 173 617 168 711 1.91e-36 148
Msa0362330 MtrunA17_Chr3g0092241 25.837 747 412 33 52 672 44 774 1.92e-36 148
Msa0362330 MtrunA17_Chr3g0085931 24.484 727 416 27 19 645 1 694 2.20e-36 148
Msa0362330 MtrunA17_Chr1g0189301 57.031 128 47 3 85 204 6 133 4.73e-36 132
Msa0362330 MtrunA17_Chr6g0470021 26.025 561 312 18 147 611 17 570 4.76e-36 146
Msa0362330 MtrunA17_Chr3g0089761 25.654 612 330 23 178 672 170 773 4.82e-36 147
Msa0362330 MtrunA17_Chr3g0082891 25.239 523 289 16 177 606 160 673 6.07e-36 146
Msa0362330 MtrunA17_Chr3g0090371 25.000 664 360 28 59 606 51 692 7.30e-36 147
Msa0362330 MtrunA17_Chr3g0089541 26.441 590 303 24 201 672 201 777 7.33e-36 147
Msa0362330 MtrunA17_Chr3g0085471 25.446 672 377 29 55 617 45 701 7.85e-36 146
Msa0362330 MtrunA17_Chr5g0415511 23.661 672 385 21 19 592 1 642 7.94e-36 145
Msa0362330 MtrunA17_Chr4g0010201 27.256 532 272 21 173 599 157 678 1.60e-35 145
Msa0362330 MtrunA17_Chr1g0197201 25.193 909 483 35 44 779 464 1348 1.80e-35 145
Msa0362330 MtrunA17_Chr3g0089781 25.484 671 370 26 52 612 44 694 2.05e-35 145
Msa0362330 MtrunA17_Chr3g0090141 25.469 640 356 26 59 592 51 675 2.58e-35 145
Msa0362330 MtrunA17_Chr1g0147141 25.758 528 260 17 173 574 161 682 2.77e-35 144
Msa0362330 MtrunA17_Chr3g0089421 24.667 750 419 31 52 672 44 776 2.98e-35 145
Msa0362330 MtrunA17_Chr3g0089961 25.038 659 362 27 52 597 44 683 4.16e-35 144
Msa0362330 MtrunA17_Chr3g0086161 25.567 661 358 26 56 606 42 678 4.59e-35 144
Msa0362330 MtrunA17_Chr3g0089811 24.868 756 408 31 52 672 44 774 5.83e-35 144
Msa0362330 MtrunA17_Chr4g0009781 26.742 531 277 20 173 599 157 679 6.53e-35 143
Msa0362330 MtrunA17_Chr3g0089471 24.775 666 377 27 49 607 41 689 6.96e-35 144
Msa0362330 MtrunA17_Chr3g0086221 25.411 669 374 26 56 620 42 689 8.17e-35 143
Msa0362330 MtrunA17_Chr1g0169951 25.476 683 374 22 37 598 23 691 1.30e-34 141
Msa0362330 MtrunA17_Chr4g0025391 24.814 673 330 28 46 574 38 678 1.60e-34 142
Msa0362330 MtrunA17_Chr5g0414201 24.286 700 405 25 19 611 1 682 1.70e-34 142
Msa0362330 MtrunA17_Chr8g0338261 23.492 630 366 20 37 564 23 638 1.84e-34 142
Msa0362330 MtrunA17_Chr3g0101351 39.056 233 107 9 16 226 10 229 1.99e-34 133
Msa0362330 MtrunA17_Chr8g0337891 23.930 631 371 21 37 569 23 642 2.08e-34 141
Msa0362330 MtrunA17_Chr3g0100841 69.792 96 25 2 19 110 1 96 2.09e-34 127
Msa0362330 MtrunA17_Chr3g0082131 25.116 649 355 25 60 592 50 683 2.59e-34 142
Msa0362330 MtrunA17_Chr3g0089601 24.734 752 414 33 52 672 42 772 3.64e-34 140
Msa0362330 MtrunA17_Chr8g0348931 27.447 521 264 20 178 592 169 681 4.02e-34 141
Msa0362330 MtrunA17_Chr4g0020501 25.871 603 329 22 56 569 3 576 4.19e-34 140
Msa0362330 MtrunA17_Chr3g0090431 25.468 534 283 19 178 606 42 565 4.77e-34 140
Msa0362330 MtrunA17_Chr6g0468271 24.306 720 410 26 19 642 1 681 6.83e-34 140
Msa0362330 MtrunA17_Chr5g0430901 24.194 868 488 34 19 806 1 778 7.92e-34 139
Msa0362330 MtrunA17_Chr7g0257191 24.109 842 472 32 37 735 23 840 9.98e-34 139
Msa0362330 MtrunA17_Chr3g0082391 24.849 664 366 26 52 601 43 687 1.15e-33 139
Msa0362330 MtrunA17_Chr3g0089591 25.254 590 323 23 121 607 118 692 1.18e-33 140
Msa0362330 MtrunA17_Chr3g0087701 26.460 548 275 19 168 593 147 688 1.30e-33 139
Msa0362330 MtrunA17_Chr8g0352861 25.325 616 331 23 178 672 177 784 1.34e-33 139
Msa0362330 MtrunA17_Chr6g0484551 26.848 514 244 22 178 584 172 660 1.75e-33 138
Msa0362330 MtrunA17_Chr3g0089501 24.335 752 417 31 52 672 42 772 2.72e-33 138
Msa0362330 MtrunA17_Chr7g0221481 26.048 668 355 27 56 605 42 688 4.80e-33 137
Msa0362330 MtrunA17_Chr6g0456121 27.349 479 260 17 173 569 149 621 4.99e-33 137
Msa0362330 MtrunA17_Chr3g0090401 23.710 717 398 28 59 648 262 956 5.42e-33 137
Msa0362330 MtrunA17_Chr3g0087841 24.858 527 266 18 178 584 170 686 1.07e-32 136
Msa0362330 MtrunA17_Chr1g0164391 24.548 664 362 29 56 602 47 688 1.43e-32 136
Msa0362330 MtrunA17_Chr3g0084971 25.108 693 354 28 160 735 142 786 1.95e-32 135
Msa0362330 MtrunA17_Chr3g0085651 24.816 681 348 26 56 606 42 688 2.07e-32 135
Msa0362330 MtrunA17_Chr3g0084031 23.994 696 378 27 81 644 69 745 2.21e-32 135
Msa0362330 MtrunA17_Chr3g0101171 57.576 99 40 1 365 463 3 99 2.24e-32 121
Msa0362330 MtrunA17_Chr3g0086151 24.848 660 364 25 56 606 42 678 2.61e-32 135
Msa0362330 MtrunA17_Chr4g0010221 27.366 486 247 19 212 599 200 677 3.01e-32 135
Msa0362330 MtrunA17_Chr3g0087541 24.739 574 316 20 173 634 168 737 4.85e-32 134
Msa0362330 MtrunA17_Chr2g0299091 26.288 563 284 20 180 626 144 691 8.17e-32 133
Msa0362330 MtrunA17_Chr7g0218941 23.012 943 528 33 22 815 9 902 9.64e-32 133
Msa0362330 MtrunA17_Chr1g0164631 25.076 662 327 29 60 575 51 689 1.51e-31 132
Msa0362330 MtrunA17_Chr3g0087301 25.487 667 354 27 19 589 1 620 2.65e-31 132
Msa0362330 MtrunA17_Chr7g0248431 26.069 491 273 18 37 446 23 504 2.86e-31 129
Msa0362330 MtrunA17_Chr6g0468341 25.840 476 273 16 19 426 1 464 3.79e-31 131
Msa0362330 MtrunA17_Chr3g0082791 24.022 716 409 26 56 650 49 750 3.97e-31 131
Msa0362330 MtrunA17_Chr3g0091041 32.716 324 153 15 178 446 170 483 7.61e-31 128
Msa0362330 MtrunA17_Chr6g0475491 25.692 506 281 17 22 446 9 500 8.41e-31 130
Msa0362330 MtrunA17_Chr3g0113791 25.217 690 374 31 58 640 48 702 8.52e-31 130
Msa0362330 MtrunA17_Chr3g0086181 24.926 674 372 27 56 620 42 690 9.29e-31 130
Msa0362330 MtrunA17_Chr3g0086621 24.622 662 363 25 56 606 42 678 1.05e-30 130
Msa0362330 MtrunA17_Chr4g0071021 25.536 466 241 15 19 409 1 435 1.31e-30 125
Msa0362330 MtrunA17_Chr8g0338671 24.544 493 277 14 175 577 47 534 1.38e-30 128
Msa0362330 MtrunA17_Chr6g0469991 27.604 384 221 12 19 360 1 369 1.65e-30 124
Msa0362330 MtrunA17_Chr4g0010251 26.501 483 252 17 212 599 200 674 2.88e-30 129
Msa0362330 MtrunA17_Chr3g0087581 25.301 664 368 25 56 611 42 685 3.82e-30 128
Msa0362330 MtrunA17_Chr1g0189261 66.667 87 26 1 19 102 1 87 7.41e-30 113
Msa0362330 MtrunA17_Chr3g0113481 25.072 690 375 31 58 640 48 702 8.26e-30 126
Msa0362330 MtrunA17_Chr8g0351821 25.330 454 252 14 19 400 1 439 1.17e-29 123
Msa0362330 MtrunA17_Chr6g0456131 23.757 724 414 26 42 649 27 728 1.87e-29 126
Msa0362330 MtrunA17_Chr1g0164581 26.923 494 253 16 201 592 172 659 2.58e-29 125
Msa0362330 MtrunA17_Chr8g0338251 23.520 625 357 19 28 553 14 616 2.61e-29 125
Msa0362330 MtrunA17_Chr5g0414291 26.250 400 236 15 19 369 1 390 3.41e-29 121
Msa0362330 MtrunA17_Chr2g0299151 25.512 733 363 31 52 644 43 732 6.41e-29 124
Msa0362330 MtrunA17_Chr3g0087731 26.104 498 268 16 211 617 2 490 6.63e-29 124
Msa0362330 MtrunA17_Chr4g0008461 25.391 512 250 17 195 575 153 663 1.32e-28 123
Msa0362330 MtrunA17_Chr3g0082311 24.622 662 363 30 56 602 47 687 2.03e-28 123
Msa0362330 MtrunA17_Chr3g0089931 25.714 490 248 18 43 451 35 489 2.12e-28 120
Msa0362330 MtrunA17_Chr3g0082351 23.759 665 362 26 52 586 43 692 2.68e-28 122
Msa0362330 MtrunA17_Chr3g0101161 45.455 198 84 6 616 801 2 187 2.72e-28 112
Msa0362330 MtrunA17_Chr5g0430331 27.228 404 212 15 19 368 1 376 3.51e-28 118
Msa0362330 MtrunA17_Chr2g0299101 25.801 562 288 21 180 626 170 717 5.45e-28 121
Msa0362330 MtrunA17_Chr2g0299121 25.445 562 290 21 180 626 170 717 1.64e-27 120
Msa0362330 MtrunA17_Chr5g0413811 26.078 464 255 15 227 611 1 455 2.10e-27 118
Msa0362330 MtrunA17_Chr2g0309151 26.180 466 245 14 227 598 1 461 2.82e-27 116
Msa0362330 MtrunA17_Chr3g0084051 24.422 692 392 25 81 650 67 749 3.98e-27 119
Msa0362330 MtrunA17_Chr5g0417301 24.960 625 346 19 19 565 1 580 8.26e-27 116
Msa0362330 MtrunA17_Chr5g0415551 24.156 563 329 21 156 626 10 566 1.81e-26 115
Msa0362330 MtrunA17_Chr6g0468331 24.324 481 272 14 19 426 1 462 1.84e-26 115
Msa0362330 MtrunA17_Chr3g0085091 24.679 624 340 23 56 569 43 646 1.84e-25 113
Msa0362330 MtrunA17_Chr5g0417251 25.000 628 322 27 255 777 15 598 2.01e-25 112
Msa0362330 MtrunA17_Chr3g0085131 24.607 699 384 27 56 633 43 719 3.08e-25 112
Msa0362330 MtrunA17_Chr3g0091011 23.576 632 348 24 56 575 43 651 1.11e-24 110
Msa0362330 MtrunA17_Chr3g0086741 25.086 582 314 20 168 633 171 746 1.21e-24 110
Msa0362330 MtrunA17_Chr3g0085111 24.717 619 341 22 56 569 43 641 5.18e-24 108
Msa0362330 MtrunA17_Chr3g0083751 25.142 529 270 19 196 606 176 696 9.56e-24 108
Msa0362330 MtrunA17_Chr3g0101411 67.949 78 22 1 19 93 1 78 3.54e-23 94.0
Msa0362330 MtrunA17_Chr3g0085551 23.652 575 317 22 142 606 8 570 3.67e-23 105
Msa0362330 MtrunA17_Chr3g0085521 24.404 545 298 20 178 617 149 684 4.09e-23 105
Msa0362330 MtrunA17_Chr3g0086091 26.223 511 265 21 211 620 2 501 5.91e-23 105
Msa0362330 MtrunA17_Chr3g0084081 25.549 501 272 16 201 606 199 693 6.16e-23 105
Msa0362330 MtrunA17_Chr3g0078361 23.476 443 228 16 207 540 1 441 6.22e-23 102
Msa0362330 MtrunA17_Chr3g0085751 23.647 702 389 26 56 633 39 717 6.24e-23 105
Msa0362330 MtrunA17_Chr3g0089431 24.601 439 227 18 54 405 42 463 9.17e-23 102
Msa0362330 MtrunA17_Chr3g0083621 24.704 506 248 18 201 575 187 690 1.02e-22 104
Msa0362330 MtrunA17_Chr1g0189311 61.250 80 21 2 207 276 1 80 2.29e-22 91.7
Msa0362330 MtrunA17_Chr1g0197181 25.385 520 281 17 370 786 4 519 2.45e-22 102
Msa0362330 MtrunA17_Chr3g0113781 25.098 510 276 23 222 640 3 497 3.21e-22 102
Msa0362330 MtrunA17_Chr8g0356251 23.288 511 249 17 201 575 202 705 4.17e-22 102
Msa0362330 MtrunA17_Chr1g0159111 22.433 633 363 24 201 734 174 777 2.41e-21 100
Msa0362330 MtrunA17_Chr3g0085161 23.570 577 304 21 173 633 28 583 2.95e-21 99.8
Msa0362330 MtrunA17_Chr8g0338861 27.761 335 184 10 293 569 17 351 3.18e-21 99.4
Msa0362330 MtrunA17_Chr8g0352211 24.297 498 265 17 175 575 1163 1645 1.33e-20 98.2
Msa0362330 MtrunA17_Chr6g0468401 27.660 282 177 10 19 286 1 269 1.51e-20 94.0
Msa0362330 MtrunA17_Chr3g0091971 23.701 481 276 16 173 575 142 609 1.69e-20 97.4
Msa0362330 MtrunA17_Chr3g0080871 24.197 529 272 17 167 575 148 667 6.49e-20 95.5
Msa0362330 MtrunA17_Chr3g0083721 23.467 473 277 16 201 592 148 616 3.79e-19 93.2
Msa0362330 MtrunA17_Chr1g0189331 49.550 111 47 3 573 681 6 109 4.11e-19 83.6
Msa0362330 MtrunA17_Chr6g0468141 28.682 258 153 8 126 361 3 251 1.60e-18 86.3
Msa0362330 MtrunA17_Chr1g0189341 48.485 99 45 2 695 789 1 97 1.34e-17 79.7
Msa0362330 MtrunA17_Chr5g0410301 22.585 704 376 28 178 736 142 821 1.52e-17 87.8
Msa0362330 MtrunA17_Chr2g0282891 28.198 344 173 16 291 574 19 348 2.82e-17 84.7
Msa0362330 MtrunA17_Chr3g0100981 42.143 140 71 3 675 806 4 141 1.01e-16 77.8
Msa0362330 MtrunA17_Chr3g0100771 42.143 140 71 3 675 806 4 141 1.01e-16 77.8
Msa0362330 MtrunA17_Chr1g0160871 37.419 155 66 6 546 676 1 148 1.03e-16 78.2
Msa0362330 MtrunA17_Chr8g0355071 25.275 273 133 9 217 426 29 293 1.32e-16 81.6
Msa0362330 MtrunA17_Chr3g0099571 23.108 489 274 14 200 592 173 655 1.78e-16 84.7
Msa0362330 MtrunA17_Chr5g0410161 23.324 686 340 31 201 734 329 980 1.07e-15 82.0
Msa0362330 MtrunA17_Chr3g0084061 23.498 749 423 31 177 786 162 899 2.18e-15 80.9
Msa0362330 MtrunA17_Chr3g0100691 44.792 96 47 2 708 799 41 134 3.77e-15 73.2
Msa0362330 MtrunA17_Chr1g0168901 23.701 481 248 16 201 592 171 621 4.69e-15 79.7
Msa0362330 MtrunA17_Chr3g0083591 23.379 509 257 20 195 583 155 650 4.92e-15 79.7
Msa0362330 MtrunA17_Chr5g0410351 24.700 583 292 21 296 753 285 845 5.81e-15 79.7
Msa0362330 MtrunA17_Chr8g0392521 29.798 198 100 8 168 327 126 322 7.22e-15 76.6
Msa0362330 MtrunA17_Chr5g0410401 23.175 548 294 23 200 644 45 568 2.82e-14 77.0
Msa0362330 MtrunA17_Chr6g0468191 27.126 247 152 10 19 249 1 235 1.36e-13 72.0
Msa0362330 MtrunA17_Chr3g0084811 23.589 496 243 18 201 575 350 830 1.80e-13 74.7
Msa0362330 MtrunA17_Chr3g0082371 26.772 254 148 9 370 587 48 299 2.35e-13 73.6
Msa0362330 MtrunA17_Chr8g0338431 28.155 206 122 7 394 573 2 207 9.19e-13 71.6
Msa0362330 MtrunA17_Chr3g0083681 22.465 503 248 18 201 583 182 662 1.01e-12 72.4
Msa0362330 MtrunA17_Chr6g0468201 25.746 268 162 9 370 612 16 271 1.15e-12 71.6
Msa0362330 MtrunA17_Chr3g0086071 27.365 296 179 9 354 613 11 306 1.53e-12 71.2
Msa0362330 MtrunA17_Chr3g0085421 33.051 118 66 4 178 286 97 210 1.84e-12 68.2
Msa0362330 MtrunA17_Chr6g0468361 26.490 302 169 13 370 642 16 293 4.07e-12 69.3
Msa0362330 MtrunA17_Chr3g0091121 22.865 363 207 11 370 672 36 385 5.94e-12 69.3
Msa0362330 MtrunA17_Chr5g0415481 25.490 255 159 9 389 613 5 258 2.42e-11 67.0
Msa0362330 MtrunA17_Chr1g0189511 29.756 205 112 9 370 569 78 255 2.43e-11 65.1
Msa0362330 MtrunA17_Chr7g0255761 28.881 277 120 13 202 451 73 299 2.68e-11 65.9
Msa0362330 MtrunA17_Chr5g0410261 27.500 280 162 10 500 753 600 864 8.62e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0362330 AT3G07040.1 28.463 924 510 25 19 803 1 912 1.55e-93 314
Msa0362330 AT5G48620.6 28.034 931 495 36 19 802 1 903 8.03e-67 239
Msa0362330 AT5G48620.1 28.034 931 495 36 19 802 1 903 8.03e-67 239
Msa0362330 AT5G48620.4 28.034 931 495 36 19 802 1 903 8.03e-67 239
Msa0362330 AT5G48620.2 28.034 931 495 36 19 802 1 903 8.03e-67 239
Msa0362330 AT5G48620.3 28.034 931 495 36 19 802 1 903 8.03e-67 239
Msa0362330 AT5G48620.5 28.034 931 495 36 19 802 1 903 8.03e-67 239
Msa0362330 AT5G35450.2 26.790 922 509 28 19 803 1 893 7.03e-66 237
Msa0362330 AT5G35450.1 26.790 922 509 28 19 803 1 893 7.03e-66 237
Msa0362330 AT1G53350.1 26.231 934 506 32 19 802 1 901 1.52e-62 227
Msa0362330 AT5G43470.3 27.634 930 500 35 19 802 1 903 7.64e-62 225
Msa0362330 AT5G43470.2 27.634 930 500 35 19 802 1 903 7.64e-62 225
Msa0362330 AT5G43470.4 27.634 930 500 35 19 802 1 903 7.64e-62 225
Msa0362330 AT5G43470.1 27.634 930 500 35 19 802 1 903 7.64e-62 225
Msa0362330 AT1G58400.1 25.877 912 531 35 19 802 1 895 1.34e-58 216
Msa0362330 AT1G50180.1 27.151 895 498 29 19 802 1 852 1.36e-58 215
Msa0362330 AT1G58400.3 25.597 922 531 35 19 802 1 905 7.23e-58 214
Msa0362330 AT1G58400.2 25.597 922 531 35 19 802 1 905 7.23e-58 214
Msa0362330 AT1G58390.1 25.108 928 524 30 19 802 1 901 1.10e-54 204
Msa0362330 AT1G58390.2 25.108 928 524 30 19 802 1 901 1.10e-54 204
Msa0362330 AT3G46710.1 25.666 826 477 23 19 728 1 805 4.11e-53 199
Msa0362330 AT3G46730.1 27.899 828 445 30 19 726 1 796 1.81e-52 197
Msa0362330 AT3G46530.1 26.826 835 440 32 19 728 1 789 7.36e-51 192
Msa0362330 AT3G50950.2 26.141 723 394 27 19 633 1 691 3.16e-50 191
Msa0362330 AT3G50950.1 26.141 723 394 27 19 633 1 691 3.16e-50 191
Msa0362330 AT1G58410.1 24.625 934 509 37 24 802 4 897 3.17e-50 191
Msa0362330 AT1G58410.4 24.625 934 509 37 24 802 4 897 3.17e-50 191
Msa0362330 AT1G58410.2 24.625 934 509 37 24 802 4 897 3.17e-50 191
Msa0362330 AT1G59780.2 24.380 927 512 37 19 802 1 881 2.44e-49 188
Msa0362330 AT1G59780.1 24.380 927 512 37 19 802 6 886 6.80e-49 187
Msa0362330 AT1G58410.3 25.138 903 511 38 24 802 4 865 2.86e-48 185
Msa0362330 AT1G59218.1 25.603 871 449 35 19 728 1 833 6.18e-46 178
Msa0362330 AT1G59218.2 25.603 871 449 35 19 728 1 833 6.18e-46 178
Msa0362330 AT1G59218.3 25.603 871 449 35 19 728 1 833 6.18e-46 178
Msa0362330 AT1G58848.1 25.603 871 449 35 19 728 1 833 6.18e-46 178
Msa0362330 AT1G58848.2 25.603 871 449 35 19 728 1 833 6.18e-46 178
Msa0362330 AT1G59620.2 24.426 741 416 25 178 802 27 739 5.42e-44 171
Msa0362330 AT1G59124.1 25.283 882 469 35 19 755 1 837 8.79e-44 171
Msa0362330 AT1G58807.2 25.283 882 469 35 19 755 1 837 8.79e-44 171
Msa0362330 AT1G59124.2 25.055 910 491 36 19 782 1 865 1.80e-43 171
Msa0362330 AT1G58807.1 25.055 910 491 36 19 782 1 865 1.80e-43 171
Msa0362330 AT1G58602.2 23.986 888 504 34 19 758 1 865 3.13e-40 160
Msa0362330 AT1G58602.1 23.986 888 504 34 19 758 1 865 3.13e-40 160
Msa0362330 AT1G10920.1 26.866 670 358 23 175 720 37 698 3.14e-38 153
Msa0362330 AT1G10920.2 26.866 670 358 23 175 720 37 698 3.14e-38 153
Msa0362330 AT1G10920.4 26.866 670 358 23 175 720 37 698 3.14e-38 153
Msa0362330 AT3G14470.1 25.599 543 290 19 168 606 162 694 4.27e-33 138
Msa0362330 AT3G14470.2 25.599 543 290 19 168 606 162 694 4.27e-33 138
Msa0362330 AT3G14460.1 23.451 678 367 24 52 596 39 697 7.05e-26 115
Msa0362330 AT1G12210.3 22.634 486 289 14 201 609 136 611 2.54e-23 106
Msa0362330 AT1G12210.2 22.634 486 289 14 201 609 136 611 2.54e-23 106
Msa0362330 AT1G12220.3 23.952 501 286 18 201 619 57 544 3.49e-23 106
Msa0362330 AT1G12210.1 22.634 486 289 14 201 609 178 653 3.75e-23 106
Msa0362330 AT1G12220.1 23.952 501 286 18 201 619 178 665 7.31e-23 105
Msa0362330 AT1G12220.2 23.952 501 286 18 201 619 178 665 7.31e-23 105
Msa0362330 AT1G61190.2 25.532 564 295 24 201 670 175 707 2.93e-22 103
Msa0362330 AT1G61190.3 25.532 564 295 24 201 670 175 707 2.93e-22 103
Msa0362330 AT1G61180.1 25.000 456 235 18 201 569 174 609 3.36e-22 103
Msa0362330 AT1G61180.2 25.000 456 235 18 201 569 174 609 4.21e-22 102
Msa0362330 AT1G61190.1 25.532 564 295 24 201 670 175 707 4.41e-22 102
Msa0362330 AT5G63020.1 24.893 466 259 14 206 593 181 633 5.88e-22 102
Msa0362330 AT4G26090.1 24.444 495 279 17 178 592 155 634 5.90e-22 102
Msa0362330 AT1G61310.1 23.319 476 273 17 178 569 155 622 2.26e-21 100
Msa0362330 AT1G61190.4 24.501 551 292 21 201 670 175 682 6.18e-21 99.0
Msa0362330 AT1G63350.3 22.399 567 301 19 124 592 105 630 1.52e-20 97.8
Msa0362330 AT1G63350.2 22.399 567 301 19 124 592 105 630 1.52e-20 97.8
Msa0362330 AT1G63350.1 22.399 567 301 19 124 592 105 630 1.81e-20 97.8
Msa0362330 AT1G63350.4 22.399 567 301 19 124 592 105 630 1.85e-20 97.4
Msa0362330 AT1G10920.5 25.636 511 273 19 309 720 26 528 1.73e-19 93.6
Msa0362330 AT1G10920.3 25.636 511 273 19 309 720 26 528 1.73e-19 93.6
Msa0362330 AT1G61300.1 25.054 467 241 19 178 557 42 486 5.93e-19 92.4
Msa0362330 AT1G61300.2 23.904 456 235 17 178 557 42 461 4.06e-18 89.7
Msa0362330 AT5G05400.2 23.415 568 289 24 201 643 8 554 1.15e-17 88.2
Msa0362330 AT5G05400.3 23.415 568 289 24 201 643 8 554 1.15e-17 88.2
Msa0362330 AT5G05400.1 22.353 765 415 30 16 643 1 723 1.53e-17 88.2
Msa0362330 AT1G12280.2 24.834 451 273 21 178 578 119 553 5.32e-15 80.1

Find 245 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTCAAGTTCTCAGTATT+TGG 0.085874 3_1:-53350428 Msa0362330:CDS
ATGGAGTGAATCTGGATATT+TGG 0.130592 3_1:+53352738 None:intergenic
AACAAATTCTAATGATTTAA+TGG 0.158680 3_1:-53351420 Msa0362330:CDS
AGATCATGTTTGTTGTATTT+TGG 0.159990 3_1:-53351752 Msa0362330:CDS
CCATTGGATCATCGGTTATT+TGG 0.177576 3_1:+53350691 None:intergenic
GTTGAGGCAGTTAAGGAAAT+TGG 0.182067 3_1:-53357539 Msa0362330:five_prime_UTR
TTGAAGCAGTTAAGAGAATT+AGG 0.182632 3_1:-53350954 Msa0362330:intron
TGAAGATGATAATTGGTTTA+TGG 0.196076 3_1:-53357887 Msa0362330:five_prime_UTR
CTAAGCTTGCTAATCTCTTT+TGG 0.213372 3_1:+53351119 None:intergenic
CATCCAAAGTCTCTAGGTTT+TGG 0.224491 3_1:+53351168 None:intergenic
GACTCAATTTCATAGTCTTC+TGG 0.225664 3_1:+53351722 None:intergenic
ATCAAATTGCCTATATTTCT+AGG 0.246259 3_1:+53351257 None:intergenic
TGGAGCATGCCAATGGATTT+TGG 0.256432 3_1:+53351188 None:intergenic
CTCCTTAGTCCTTAAAGTTT+AGG 0.256543 3_1:+53356956 None:intergenic
GATCCAAGGTCTCTAGGTTT+TGG 0.256620 3_1:+53357764 None:intergenic
GATATATCAATGAGCTCTTT+TGG 0.259666 3_1:+53351974 None:intergenic
AGTTATTGATTCAAGATTCT+TGG 0.269381 3_1:-53349780 Msa0362330:three_prime_UTR
TGAAACTTGGGAATCCATTC+TGG 0.274464 3_1:+53357319 None:intergenic
AGCTTGAAGTTCTTGATGTT+TGG 0.276120 3_1:-53357003 Msa0362330:five_prime_UTR
TATATGATTTGTTGTTGTTC+TGG 0.283191 3_1:-53349611 Msa0362330:three_prime_UTR
TGAATTTCAAGGAGGGAAAA+AGG 0.284885 3_1:-53356915 Msa0362330:intron
TGATCAATTGAGCAATCTTA+TGG 0.291285 3_1:+53352719 None:intergenic
ACCTAGAGACCTTGGATCTA+AGG 0.291849 3_1:-53357759 Msa0362330:five_prime_UTR
GATTCCCAAGTTTCAAAATC+TGG 0.301943 3_1:-53357311 Msa0362330:five_prime_UTR
CCAGTTTAATTATACATAAC+TGG 0.307205 3_1:-53349551 Msa0362330:three_prime_UTR
GTGGATACCTCTAAGCAAAT+TGG 0.307803 3_1:+53352960 None:intergenic
TTGATTCTTGAGGTTGGATT+TGG 0.311631 3_1:+53352602 None:intergenic
GCTTGAAGTTCTTGATGTTT+GGG 0.316574 3_1:-53357002 Msa0362330:five_prime_UTR
TCTCAATCATACAGTATAGA+AGG 0.317497 3_1:-53352340 Msa0362330:CDS
CTGAACATTCTAGTCTCCTT+TGG 0.317866 3_1:+53357709 None:intergenic
TTGGAGCATTGCAATTGATT+TGG 0.321998 3_1:+53357783 None:intergenic
GTGGAATACAAAATGCTAAA+TGG 0.322266 3_1:-53352579 Msa0362330:CDS
TTAAGCTGCAAGAATTCTTC+GGG 0.323585 3_1:-53357826 Msa0362330:five_prime_UTR
CATTGGATCATCGGTTATTT+GGG 0.330586 3_1:+53350692 None:intergenic
GGCTGAAATGGCTGTGAGTT+TGG 0.333662 3_1:-53353019 Msa0362330:CDS
GAAGATGATAATTGGTTTAT+GGG 0.334233 3_1:-53357886 Msa0362330:five_prime_UTR
TCCGTGAAGGGGTCAAAATA+TGG 0.334545 3_1:-53352846 Msa0362330:CDS
AAAGAAGCCAATTTGCTTAG+AGG 0.336733 3_1:-53352967 Msa0362330:CDS
ATCTCTACGATTAACATTGA+TGG 0.337298 3_1:-53351581 Msa0362330:CDS
GCTTCAAGTTCTCAGTATTT+GGG 0.337826 3_1:-53350427 Msa0362330:CDS
TTGATCCCTCGCCATCGAAT+TGG 0.339273 3_1:-53352691 Msa0362330:CDS
ACAGATTGTTCTTCAGTTAA+CGG 0.340595 3_1:+53352040 None:intergenic
AATCTCTTTGTTTCAATTGA+AGG 0.344882 3_1:-53357659 Msa0362330:five_prime_UTR
CCAGTTATGTATAATTAAAC+TGG 0.346044 3_1:+53349551 None:intergenic
TGGGAAAGTTGAGGCAGTTA+AGG 0.346607 3_1:-53357546 Msa0362330:five_prime_UTR
GATTCTGTTCCTAGAAATAT+AGG 0.349646 3_1:-53351266 Msa0362330:CDS
TTGAGGCAGTTAAGGAAATT+GGG 0.353064 3_1:-53357538 Msa0362330:five_prime_UTR
TCTGGAACCGTCTTGAGGTT+GGG 0.353340 3_1:+53357046 None:intergenic
AGAGTTGATTAATAGAAGTT+TGG 0.355272 3_1:-53351609 Msa0362330:CDS
ATTAAATTGAAGGATGGTAT+TGG 0.360658 3_1:-53351059 Msa0362330:CDS
TTTCAATTGAAGGGTTGTAT+AGG 0.362080 3_1:-53357649 Msa0362330:five_prime_UTR
ATCCTAAACTTTAAGGACTA+AGG 0.364620 3_1:-53356958 Msa0362330:five_prime_UTR
GTACTGTCTTTCTCTAATAA+TGG 0.365278 3_1:-53349839 Msa0362330:three_prime_UTR
CTTCGAGATCTTAGACTGTA+TGG 0.366172 3_1:-53350783 Msa0362330:CDS
ATGCTTTGCACAAATTCATT+TGG 0.366795 3_1:+53350399 None:intergenic
TATTGAAAGCTCACATGTTC+GGG 0.370732 3_1:-53351393 Msa0362330:CDS
ACTCAATTTCATAGTCTTCT+GGG 0.375980 3_1:+53351723 None:intergenic
TTTAAGCTGCAAGAATTCTT+CGG 0.377697 3_1:-53357827 Msa0362330:five_prime_UTR
ATGACAATTGAATGCAAGTT+AGG 0.377909 3_1:+53357118 None:intergenic
AATGTCTTTCATTAAATTGA+AGG 0.379051 3_1:-53351069 Msa0362330:CDS
TGTCGTCTCTGTGGTGGGAA+TGG 0.384738 3_1:-53352452 Msa0362330:CDS
CACTTGCTGTCACTCTATAT+TGG 0.385160 3_1:-53350648 Msa0362330:CDS
TGGAGTGAATCTGGATATTT+GGG 0.387623 3_1:+53352739 None:intergenic
AGCAACTGCTTCCACTGTTA+AGG 0.391384 3_1:-53352990 Msa0362330:CDS
TTTCCCTCCTTGAAATTCAA+TGG 0.392589 3_1:+53356919 None:intergenic
GGATGGAATAGAGTTAATTA+AGG 0.393276 3_1:-53357572 Msa0362330:five_prime_UTR
GTATTGAAAGCTCACATGTT+CGG 0.394830 3_1:-53351394 Msa0362330:CDS
TTGATCGGCTGGTTGGTAAA+AGG 0.399394 3_1:-53352490 Msa0362330:CDS
ACGGCGGTATTGTTTACTTA+AGG 0.399757 3_1:+53351454 None:intergenic
TATTGGATCTTCAATTAAAC+CGG 0.400701 3_1:+53357267 None:intergenic
GCAATCTTATGGAGTGAATC+TGG 0.409572 3_1:+53352730 None:intergenic
TGTGGTGGGAATGGGAGGGC+AGG 0.410113 3_1:-53352443 Msa0362330:CDS
TCTAAGTGTCGAATGCCATC+TGG 0.412333 3_1:+53357028 None:intergenic
GTCGTCTCTGTGGTGGGAAT+GGG 0.416498 3_1:-53352451 Msa0362330:CDS
ATCTTGAATCAATAACTTTG+AGG 0.418464 3_1:+53349786 None:intergenic
GTTGACTGCAATGGCTGAAA+TGG 0.418683 3_1:-53353031 Msa0362330:CDS
ATAGAGTTAATTAAGGAGTT+GGG 0.419052 3_1:-53357565 Msa0362330:five_prime_UTR
TGATCCCTCGCCATCGAATT+GGG 0.422138 3_1:-53352690 Msa0362330:CDS
TTCCACTTGATTCTTGAGGT+TGG 0.422871 3_1:+53352596 None:intergenic
GCAGTTAAGGAAATTGGGTT+TGG 0.424489 3_1:-53357533 Msa0362330:five_prime_UTR
GTCTCTGTGGTGGGAATGGG+AGG 0.424705 3_1:-53352448 Msa0362330:CDS
GCCTCAGGATACTACGGAAA+TGG 0.424753 3_1:-53352278 Msa0362330:CDS
TGTGGAGTTGTTTAATAAGA+AGG 0.426046 3_1:-53352020 Msa0362330:CDS
ACTTGGAGAAACTGCGCATT+GGG 0.432187 3_1:-53357453 Msa0362330:five_prime_UTR
ATCTCTTTGTTTCAATTGAA+GGG 0.433104 3_1:-53357658 Msa0362330:five_prime_UTR
AATAGAGTTAATTAAGGAGT+TGG 0.433498 3_1:-53357566 Msa0362330:five_prime_UTR
TAGATATTTCTAATTTGTGC+AGG 0.440127 3_1:-53349519 None:intergenic
CTTGAAGCTTCTTTAAGTGT+TGG 0.440159 3_1:+53350442 None:intergenic
AGCTGAAGGGTTTGTGAAAG+AGG 0.441702 3_1:-53351675 Msa0362330:CDS
TTTGATAGCAAGGAGGTTAG+TGG 0.443884 3_1:-53352394 Msa0362330:intron
ATATGGGTGAAGCAGGTGAT+AGG 0.445652 3_1:-53352829 Msa0362330:intron
GGGAAGTTAGAGAAGCTGCC+AGG 0.446750 3_1:-53350762 Msa0362330:CDS
CGGCGTCCTTAAGGAATGCT+TGG 0.453205 3_1:+53352899 None:intergenic
GCTCCAAAACCTAGAGACTT+TGG 0.453614 3_1:-53351171 Msa0362330:CDS
ATCTGGTTGAGTTGATGTTA+AGG 0.454427 3_1:-53357294 Msa0362330:five_prime_UTR
GTTTCACAAGTCTTTGCCTC+AGG 0.458735 3_1:-53352293 Msa0362330:CDS
GGTAGGTACAGTCTTGAGTT+TGG 0.462876 3_1:+53350470 None:intergenic
CCCTTAGATCCAAGGTCTCT+AGG 0.462896 3_1:+53357758 None:intergenic
ATATCATGTATGAAATATGT+TGG 0.463205 3_1:-53349725 Msa0362330:three_prime_UTR
GCATATGCCATTGAATTTCA+AGG 0.463250 3_1:-53356926 Msa0362330:exon
ATCTGGAACCGTCTTGAGGT+TGG 0.464998 3_1:+53357045 None:intergenic
CTCTTAGAAAGCTCGAGTTA+TGG 0.469545 3_1:-53350500 Msa0362330:intron
AGGGTTTGTGAAAGAGGAAA+AGG 0.471813 3_1:-53351669 Msa0362330:CDS
GTTAATTGACAGGTGGTGCC+TGG 0.473169 3_1:-53349938 Msa0362330:intron
GGGTTTGTGAAAGAGGAAAA+GGG 0.474223 3_1:-53351668 Msa0362330:CDS
CAAAGCATTGCTCCAAATGA+AGG 0.475354 3_1:-53350384 Msa0362330:CDS
GAAACTACTTGCAGCAAAAG+AGG 0.477642 3_1:-53352228 Msa0362330:CDS
CTGGAACCGTCTTGAGGTTG+GGG 0.477775 3_1:+53357047 None:intergenic
CAATTGAAGGGTTGTATAGG+AGG 0.478596 3_1:-53357646 Msa0362330:five_prime_UTR
TAGTGATTCCATTGGATCAT+CGG 0.479264 3_1:+53350683 None:intergenic
TTAAGGAAATTGGGTTTGGT+TGG 0.483579 3_1:-53357529 Msa0362330:five_prime_UTR
AAGCATCCAAGCATTCCTTA+AGG 0.483827 3_1:-53352905 Msa0362330:CDS
AAGGAAAGAAGTGAAAGATA+TGG 0.484511 3_1:-53352628 Msa0362330:CDS
CCTAGAGACCTTGGATCTAA+GGG 0.489683 3_1:-53357758 Msa0362330:five_prime_UTR
TGTATTCCACTTGATTCTTG+AGG 0.495527 3_1:+53352592 None:intergenic
CTAGAGAAAGATTGATCGGC+TGG 0.496540 3_1:-53352501 Msa0362330:CDS
CGAACAGATTTGCCGCCAGC+AGG 0.497800 3_1:+53350315 None:intergenic
ATTGAATGAGCTGCGACACT+TGG 0.499420 3_1:-53357470 Msa0362330:five_prime_UTR
ATCATCAACAATGCTTATGA+AGG 0.500018 3_1:-53357205 Msa0362330:five_prime_UTR
CTAGAGACTTTGGATGTAAG+AGG 0.500048 3_1:-53351161 Msa0362330:CDS
TGCAGCTTAAATATTTCAAG+TGG 0.501345 3_1:+53357839 None:intergenic
CCGTGAAGGGGTCAAAATAT+GGG 0.504344 3_1:-53352845 Msa0362330:intron
CTCTTACATCCAAAGTCTCT+AGG 0.508935 3_1:+53351162 None:intergenic
TATCATGTATGAAATATGTT+GGG 0.511174 3_1:-53349724 Msa0362330:three_prime_UTR
AGTACACTTGGAGCAATCAC+TGG 0.513368 3_1:+53349908 None:intergenic
GCGCACTGTCGTCTCTGTGG+TGG 0.514796 3_1:-53352458 Msa0362330:CDS
CACTTGGAGAAACTGCGCAT+TGG 0.514842 3_1:-53357454 Msa0362330:five_prime_UTR
TATTTCTAGGAACAGAATCA+AGG 0.515266 3_1:+53351270 None:intergenic
CTTCTTTAAGTGTTGGATGC+CGG 0.516515 3_1:+53350449 None:intergenic
ATTGGCCACCATGGTTATGA+AGG 0.517060 3_1:-53350630 Msa0362330:CDS
CGCACTGTCGTCTCTGTGGT+GGG 0.518259 3_1:-53352457 Msa0362330:CDS
TGATCCTTTGTCAATGATGA+TGG 0.519128 3_1:+53350530 None:intergenic
AAACTAAAGGAACTAACCAT+TGG 0.519283 3_1:-53350573 Msa0362330:CDS
GTCTTTGCCTCAGGATACTA+CGG 0.520877 3_1:-53352284 Msa0362330:CDS
TACAAAGGGCACATGCTGAA+TGG 0.521415 3_1:+53350347 None:intergenic
AGTTGACGAAGTTTCCAGAA+TGG 0.527308 3_1:-53357333 Msa0362330:five_prime_UTR
CTTCGTCAGTGGGTAGCTGA+AGG 0.529366 3_1:-53351689 Msa0362330:CDS
CCACTAGCAATTGTTGCCAT+CGG 0.530538 3_1:-53351920 Msa0362330:CDS
CCAAATAACCGATGATCCAA+TGG 0.530756 3_1:-53350691 Msa0362330:CDS
ATGGAGGAAATTGATGTTGT+GGG 0.530838 3_1:-53352535 Msa0362330:CDS
ATAGATAGCAACTGTGAGGA+TGG 0.533014 3_1:-53357589 Msa0362330:five_prime_UTR
CAAATGAAGGAAAAGAGCAC+TGG 0.533037 3_1:-53350371 Msa0362330:CDS
AAAATGCAATCGAGTGGAAG+AGG 0.536610 3_1:-53351874 Msa0362330:intron
ATACTACGGAAATGGATAGA+AGG 0.536634 3_1:-53352270 Msa0362330:CDS
AGTCTAAGATCTCGAAGCAT+TGG 0.537507 3_1:+53350789 None:intergenic
GAAGGGTTGTATAGGAGGCA+TGG 0.539004 3_1:-53357641 Msa0362330:five_prime_UTR
GCAGGATAAAACTCTACAAA+GGG 0.539563 3_1:+53350333 None:intergenic
ATTGACAGGTGGTGCCTGGT+TGG 0.540117 3_1:-53349934 Msa0362330:intron
AAGGAGACAACGTCCGTGAA+GGG 0.540811 3_1:-53352858 Msa0362330:CDS
GCTCCAAAACCTAGAGACCT+TGG 0.540813 3_1:-53357767 Msa0362330:five_prime_UTR
GTGGTGGGAATGGGAGGGCA+GGG 0.546309 3_1:-53352442 Msa0362330:CDS
AGAAAGATTGATCGGCTGGT+TGG 0.547060 3_1:-53352497 Msa0362330:CDS
GCAATCACTGGAAGCCAACC+AGG 0.547086 3_1:+53349920 None:intergenic
TTCATACATGATATATTACA+AGG 0.548733 3_1:+53349734 None:intergenic
TGGAGGGTTTCACAAACTAA+AGG 0.549692 3_1:-53350586 Msa0362330:CDS
TTCGTCAGTGGGTAGCTGAA+GGG 0.551594 3_1:-53351688 Msa0362330:CDS
CAGTATAGAAGGGTTGTTGA+GGG 0.552234 3_1:-53352329 Msa0362330:CDS
GTGTCGCAGCTCATTCAATA+CGG 0.552689 3_1:+53357474 None:intergenic
ACTCAATGAGATGCAACACT+TGG 0.553831 3_1:-53350886 Msa0362330:CDS
TCTTTCATTAAATTGAAGGA+TGG 0.554087 3_1:-53351065 Msa0362330:CDS
AAAAGCCTTCCAAAATCCAT+TGG 0.555015 3_1:-53351197 Msa0362330:CDS
CTAAGATCTCGAAGCATTGG+TGG 0.559163 3_1:+53350792 None:intergenic
TCCTCCATGTGAACCAATCG+AGG 0.564468 3_1:+53352550 None:intergenic
GAGTTGATGTTAAGGCGCTC+CGG 0.566096 3_1:-53357286 Msa0362330:five_prime_UTR
TGGAGGGTTACGAAATCTAA+AGG 0.567054 3_1:-53357161 Msa0362330:five_prime_UTR
GGTTTGTGAAAGAGGAAAAG+GGG 0.568258 3_1:-53351667 Msa0362330:CDS
GTTGGTGTTAGAAGAGAACA+TGG 0.569422 3_1:-53357511 Msa0362330:five_prime_UTR
GGAAGTTAGAGAAGCTGCCA+GGG 0.570696 3_1:-53350761 Msa0362330:CDS
CATTCAATTGTCATCAACAA+AGG 0.571975 3_1:-53357109 Msa0362330:five_prime_UTR
AGAAAGCTACTACATCTTCG+AGG 0.572349 3_1:-53351098 Msa0362330:CDS
AATTTGTTTCTATTGATAGA+CGG 0.573415 3_1:+53351435 None:intergenic
ATCCAACCTCAAGAATCAAG+TGG 0.575801 3_1:-53352598 Msa0362330:CDS
GCAGTTAAGAGAATTAGGCT+TGG 0.577236 3_1:-53350949 Msa0362330:intron
CATGGAGGAAATTGATGTTG+TGG 0.577832 3_1:-53352536 Msa0362330:CDS
TTTAGGATAAAACTCTACAC+AGG 0.579999 3_1:+53356973 None:intergenic
AAGCATTGTTGATGATTGAG+AGG 0.581495 3_1:+53357212 None:intergenic
TGCCATCTGGAACCGTCTTG+AGG 0.581810 3_1:+53357041 None:intergenic
TTCGAGATCTTAGACTGTAT+GGG 0.581887 3_1:-53350782 Msa0362330:CDS
GAGTCTAGAGAAAGATTGAT+CGG 0.583252 3_1:-53352505 Msa0362330:CDS
CAAGGAAGATGAATTTCCAA+TGG 0.583376 3_1:+53350557 None:intergenic
AGCAGGATAAAACTCTACAA+AGG 0.585391 3_1:+53350332 None:intergenic
TTAAGGAGTTGGGAAAGTTG+AGG 0.586300 3_1:-53357555 Msa0362330:five_prime_UTR
ATTTCTAGGAACAGAATCAA+GGG 0.586905 3_1:+53351271 None:intergenic
CTCAATCATACAGTATAGAA+GGG 0.588942 3_1:-53352339 Msa0362330:CDS
TTAAGAGTTCGAAGCATAGG+AGG 0.594673 3_1:+53357367 None:intergenic
GTTCGTCTTAGAAGAGAGCA+TGG 0.594697 3_1:-53350927 Msa0362330:CDS
GAAGGAGACAACGTCCGTGA+AGG 0.596110 3_1:-53352859 Msa0362330:CDS
TAAAGATAAAAGACCTCCGA+TGG 0.596937 3_1:+53351904 None:intergenic
TAAGAGTTCGAAGCATAGGA+GGG 0.597999 3_1:+53357368 None:intergenic
TCTGACCCAATTCGATGGCG+AGG 0.598036 3_1:+53352685 None:intergenic
TTGGCTTCTTTCCTTAACAG+TGG 0.600303 3_1:+53352979 None:intergenic
AACTTTCACCTTCATAACCA+TGG 0.601685 3_1:+53350622 None:intergenic
CTGACCCAATTCGATGGCGA+GGG 0.605698 3_1:+53352686 None:intergenic
TGCTTCGAACTCTTAAAACA+CGG 0.605817 3_1:-53357360 Msa0362330:five_prime_UTR
AACGGTTGTACAAGTACACT+TGG 0.606675 3_1:+53349896 None:intergenic
TTTAAGTGTTGGATGCCGGT+AGG 0.606930 3_1:+53350453 None:intergenic
GTCAATGATGATGGAACACA+AGG 0.609161 3_1:+53350539 None:intergenic
TGTTCCATCATCATTGACAA+AGG 0.609943 3_1:-53350534 Msa0362330:CDS
AACCTCAAGACGGTTCCAGA+TGG 0.612735 3_1:-53357043 Msa0362330:five_prime_UTR
CCCTCGATTGGTTCACATGG+AGG 0.612781 3_1:-53352551 Msa0362330:CDS
CTAAGATACTACTTCGTCAG+TGG 0.613003 3_1:-53351700 Msa0362330:CDS
ACAGTATAGAAGGGTTGTTG+AGG 0.614945 3_1:-53352330 Msa0362330:CDS
AGCATTGTTGATGATTGAGA+GGG 0.616744 3_1:+53357213 None:intergenic
TAAGCTGCAAGAATTCTTCG+GGG 0.617553 3_1:-53357825 Msa0362330:five_prime_UTR
TGTAGCTTTGGAATCCACCC+TGG 0.618726 3_1:+53350744 None:intergenic
GCTACAAACGCTAAGTGAGG+TGG 0.619599 3_1:-53357614 Msa0362330:five_prime_UTR
TTGGAACAGACATGCCGCAA+CGG 0.619797 3_1:+53349878 None:intergenic
GAATCTCTGACCCAATTCGA+TGG 0.622625 3_1:+53352680 None:intergenic
AAACTCAAGACTGTACCTAC+CGG 0.622920 3_1:-53350468 Msa0362330:CDS
TGACCCTCGATTGGTTCACA+TGG 0.623455 3_1:-53352554 Msa0362330:CDS
TCTGGATATTTGGGATGACG+AGG 0.625130 3_1:+53352748 None:intergenic
TAAATGGTATGACCCTCGAT+TGG 0.626326 3_1:-53352563 Msa0362330:CDS
TGATGTATGCAAATTCCTTG+TGG 0.626853 3_1:+53352941 None:intergenic
TCTCTGTGGTGGGAATGGGA+GGG 0.627084 3_1:-53352447 Msa0362330:CDS
ATGCCATTGAATTTCAAGGA+GGG 0.627403 3_1:-53356922 Msa0362330:CDS
TCCAAAGCTGCAAAAGTGAG+AGG 0.627466 3_1:-53353053 Msa0362330:intron
CTAGCAATTGTTGCCATCGG+AGG 0.628134 3_1:-53351917 Msa0362330:CDS
TAAGATACTACTTCGTCAGT+GGG 0.630857 3_1:-53351699 Msa0362330:CDS
AGGAGACAACGTCCGTGAAG+GGG 0.632342 3_1:-53352857 Msa0362330:CDS
GTTAACTGAAGAACAATCTG+TGG 0.633486 3_1:-53352038 Msa0362330:CDS
GCTTCGAACTCTTAAAACAC+GGG 0.633614 3_1:-53357359 Msa0362330:five_prime_UTR
TAGAGACCTTGGATCTAAGG+GGG 0.641953 3_1:-53357756 Msa0362330:five_prime_UTR
TCACTCTATATTGGCCACCA+TGG 0.648774 3_1:-53350639 Msa0362330:CDS
CTAGAGACCTTGGATCTAAG+GGG 0.651119 3_1:-53357757 Msa0362330:five_prime_UTR
AAGTGAGAGGTTGACTGCAA+TGG 0.651750 3_1:-53353040 Msa0362330:CDS
AAGAGTTCGAAGCATAGGAG+GGG 0.653024 3_1:+53357369 None:intergenic
GAAGACATTAGAAGAAGTTG+CGG 0.654596 3_1:-53351645 Msa0362330:CDS
ATCGCTACAAACGCTAAGTG+AGG 0.656671 3_1:-53357617 Msa0362330:five_prime_UTR
CCTCCATGTGAACCAATCGA+GGG 0.658471 3_1:+53352551 None:intergenic
TCCATTTCCGTAGTATCCTG+AGG 0.662932 3_1:+53352277 None:intergenic
CCGATGGCAACAATTGCTAG+TGG 0.670331 3_1:+53351920 None:intergenic
AGTTAGAGAAGCTGCCAGGG+TGG 0.672069 3_1:-53350758 Msa0362330:CDS
TAGGTTCTATGATATACCAA+AGG 0.672269 3_1:-53357725 Msa0362330:five_prime_UTR
TAGAAGGTCATTAATCGATG+AGG 0.673153 3_1:-53352254 Msa0362330:CDS
TAGTATCCCCAACCTCAAGA+CGG 0.673784 3_1:-53357053 Msa0362330:five_prime_UTR
AGAGCGCACTGTCGTCTCTG+TGG 0.675845 3_1:-53352461 Msa0362330:CDS
GTGTACTTGTACAACCGTTG+CGG 0.677191 3_1:-53349892 Msa0362330:CDS
AAGCTGCAAGAATTCTTCGG+GGG 0.682228 3_1:-53357824 Msa0362330:five_prime_UTR
TTAGGATAAAACTCTACACA+GGG 0.690343 3_1:+53356974 None:intergenic
AGAGACCTTGGATCTAAGGG+GGG 0.692672 3_1:-53357755 Msa0362330:five_prime_UTR
TTGTTTCTATTGATAGACGG+CGG 0.697782 3_1:+53351438 None:intergenic
GGAAATAGATAGCAACTGTG+AGG 0.713837 3_1:-53357593 Msa0362330:five_prime_UTR
TTTCACCTTCATAACCATGG+TGG 0.730892 3_1:+53350625 None:intergenic
TATGCCATTGAATTTCAAGG+AGG 0.736147 3_1:-53356923 Msa0362330:CDS
TTTGCTTAGAGGTATCCACA+AGG 0.765159 3_1:-53352956 Msa0362330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATGAGAAATTATATTTA+TGG - chr3_1:53350535-53350554 Msa0362330:CDS 10.0%
!!! AGTTTTATGTAATATAAATT+AGG - chr3_1:53350976-53350995 Msa0362330:intron 10.0%
!!! AAAAAAATTATTTTTTTTGG+GGG + chr3_1:53351088-53351107 None:intergenic 10.0%
!!! TTTTTTTTAAGAAGATAAAA+TGG + chr3_1:53353548-53353567 None:intergenic 10.0%
!! ATAAAAAATCACAATATTTA+TGG - chr3_1:53353713-53353732 Msa0362330:intron 10.0%
!! AAAAACTATTTATTATAATG+TGG + chr3_1:53353866-53353885 None:intergenic 10.0%
!!! TACATTATTATTTTTTCATT+TGG + chr3_1:53357553-53357572 None:intergenic 10.0%
!! CAAAATAGAAAATTTATTTC+AGG + chr3_1:53350609-53350628 None:intergenic 15.0%
!!! ATTATATTATTTTTCCAAAG+TGG - chr3_1:53351138-53351157 Msa0362330:CDS 15.0%
!!! AACCTTAATTTTGATTTATA+GGG - chr3_1:53351599-53351618 Msa0362330:CDS 15.0%
!!! AGAACATTTTTTTTAAATGT+TGG - chr3_1:53352487-53352506 Msa0362330:CDS 15.0%
!! AAAATTCATTAATCAATGTT+CGG - chr3_1:53352512-53352531 Msa0362330:CDS 15.0%
!! TTGTTGTAAAAAAAATTATG+CGG + chr3_1:53352683-53352702 None:intergenic 15.0%
!! ATATAAAAAACTGGTAATAT+TGG - chr3_1:53353827-53353846 Msa0362330:intron 15.0%
!! ACAAAAAGACAAAAAAATTA+TGG - chr3_1:53354009-53354028 Msa0362330:intron 15.0%
!!! AATGTTTCAATTTTATTTTC+AGG + chr3_1:53354248-53354267 None:intergenic 15.0%
!! AACAAATTCTAATGATTTAA+TGG - chr3_1:53355989-53356008 Msa0362330:intron 15.0%
!!! AATATGTATTGATAATCATT+TGG + chr3_1:53357159-53357178 None:intergenic 15.0%
!!! TTTTCTTATTCTAAAAGAAA+AGG + chr3_1:53357762-53357781 None:intergenic 15.0%
!!! TGATGTAATTGATTTTCATT+TGG - chr3_1:53350011-53350030 Msa0362330:intron 20.0%
!! TGGAAAAATAATATAATCTG+AGG + chr3_1:53351135-53351154 None:intergenic 20.0%
!!! TATATTAGAGTATATTTTGC+TGG - chr3_1:53351296-53351315 Msa0362330:CDS 20.0%
!!! AATTCATGGTTTTAAAGTAT+GGG - chr3_1:53351406-53351425 Msa0362330:CDS 20.0%
!! ATTGGTTGAAATCTTTAATT+TGG - chr3_1:53351543-53351562 Msa0362330:intron 20.0%
!!! TTGGTTGAAATCTTTAATTT+GGG - chr3_1:53351544-53351563 Msa0362330:intron 20.0%
!!! GAACCTTAATTTTGATTTAT+AGG - chr3_1:53351598-53351617 Msa0362330:CDS 20.0%
!!! ACCTTAATTTTGATTTATAG+GGG - chr3_1:53351600-53351619 Msa0362330:CDS 20.0%
!! TACTGTCAATTAAATAAATC+AGG + chr3_1:53351775-53351794 None:intergenic 20.0%
!! AGTATGTTTAATGCAAATTT+CGG + chr3_1:53351851-53351870 None:intergenic 20.0%
!! GAAAAAATAACTAAGAAAGT+AGG - chr3_1:53351894-53351913 Msa0362330:CDS 20.0%
!! TTAATATACTCTATCAAATG+AGG - chr3_1:53352029-53352048 Msa0362330:CDS 20.0%
!!! ATTTTTTATGGAACAATTCT+TGG - chr3_1:53352076-53352095 Msa0362330:CDS 20.0%
!! ACAAATTACTTGGATAAATT+GGG - chr3_1:53352732-53352751 Msa0362330:CDS 20.0%
!! AAAAGACAATTTAAACAAGA+GGG - chr3_1:53352974-53352993 Msa0362330:CDS 20.0%
!! GATTACAAAAACAAAAAACA+AGG + chr3_1:53353416-53353435 None:intergenic 20.0%
!!! TTACCAGTTTTTTATATACA+TGG + chr3_1:53353824-53353843 None:intergenic 20.0%
!! ACTATTTATTATAATGTGGT+TGG + chr3_1:53353862-53353881 None:intergenic 20.0%
!! AATATTGATAGGGATTATAT+AGG + chr3_1:53354156-53354175 None:intergenic 20.0%
!!! GCTGTAATTGATAATAAAAA+TGG - chr3_1:53355261-53355280 Msa0362330:intron 20.0%
!! GTAAGATATTTATAACAACA+AGG - chr3_1:53355286-53355305 Msa0362330:intron 20.0%
!! GATATTGTTAAAAAATGCAA+AGG - chr3_1:53355462-53355481 Msa0362330:intron 20.0%
!!! AATTTGTTTCTATTGATAGA+CGG + chr3_1:53355977-53355996 None:intergenic 20.0%
!! AATGTCTTTCATTAAATTGA+AGG - chr3_1:53356340-53356359 Msa0362330:intron 20.0%
!!! ATATATTTTAGTGATTCCAT+TGG + chr3_1:53356737-53356756 None:intergenic 20.0%
!!! GAAAGTTTGTATTTTCAAAA+TGG - chr3_1:53356803-53356822 Msa0362330:intron 20.0%
!! TGATTATCAATACATATTCT+TGG - chr3_1:53357161-53357180 Msa0362330:five_prime_UTR 20.0%
!!! ATATTCTTGGTAATATGTTT+TGG - chr3_1:53357174-53357193 Msa0362330:five_prime_UTR 20.0%
!! GCAAATAGAGAAATTAATTT+AGG + chr3_1:53357299-53357318 None:intergenic 20.0%
!!! ATAATTTGTTGTTAATTGAC+AGG - chr3_1:53357461-53357480 Msa0362330:five_prime_UTR 20.0%
!! TTCATACATGATATATTACA+AGG + chr3_1:53357678-53357697 None:intergenic 20.0%
!! ATATCATGTATGAAATATGT+TGG - chr3_1:53357684-53357703 Msa0362330:five_prime_UTR 20.0%
!! TATCATGTATGAAATATGTT+GGG - chr3_1:53357685-53357704 Msa0362330:five_prime_UTR 20.0%
!! TGAAGATGATAATTGGTTTA+TGG - chr3_1:53349522-53349541 Msa0362330:three_prime_UTR 25.0%
!! GAAGATGATAATTGGTTTAT+GGG - chr3_1:53349523-53349542 Msa0362330:three_prime_UTR 25.0%
!! AATCTCTTTGTTTCAATTGA+AGG - chr3_1:53349750-53349769 Msa0362330:three_prime_UTR 25.0%
!! ATCTCTTTGTTTCAATTGAA+GGG - chr3_1:53349751-53349770 Msa0362330:three_prime_UTR 25.0%
! AATAGAGTTAATTAAGGAGT+TGG - chr3_1:53349843-53349862 Msa0362330:three_prime_UTR 25.0%
! ATAGAGTTAATTAAGGAGTT+GGG - chr3_1:53349844-53349863 Msa0362330:three_prime_UTR 25.0%
! TATTGGATCTTCAATTAAAC+CGG + chr3_1:53350145-53350164 None:intergenic 25.0%
!!! AGATTTTCAAGAGACTTTAT+TGG + chr3_1:53350162-53350181 None:intergenic 25.0%
!!! GAGTTTTATCCTAAACTTTA+AGG - chr3_1:53350444-53350463 Msa0362330:CDS 25.0%
! ACATGACAGAAGAAAATTAA+TGG + chr3_1:53350636-53350655 None:intergenic 25.0%
! AACAACAAAATAGCTCTTTA+GGG + chr3_1:53350694-53350713 None:intergenic 25.0%
! TAACAACAAAATAGCTCTTT+AGG + chr3_1:53350695-53350714 None:intergenic 25.0%
!!! CTATTTTGTTGTTAATGTGT+AGG - chr3_1:53350701-53350720 Msa0362330:CDS 25.0%
! TAAAACGAAATTTCTTCAAG+TGG - chr3_1:53350745-53350764 Msa0362330:CDS 25.0%
!! TTCACTTTAAGAGAGAAATA+AGG + chr3_1:53350957-53350976 None:intergenic 25.0%
! AATAAAGATAAGGGACAAAA+AGG + chr3_1:53351010-53351029 None:intergenic 25.0%
! GAACCTCAAAATAAAGATAA+GGG + chr3_1:53351019-53351038 None:intergenic 25.0%
! TGAACCTCAAAATAAAGATA+AGG + chr3_1:53351020-53351039 None:intergenic 25.0%
!!! AAATTATTTTTTTTGGGGGT+GGG + chr3_1:53351084-53351103 None:intergenic 25.0%
!!! AAAATTATTTTTTTTGGGGG+TGG + chr3_1:53351085-53351104 None:intergenic 25.0%
!!! GGTCCTTTAATTTTTTTAAC+CGG - chr3_1:53351362-53351381 Msa0362330:CDS 25.0%
!!! GTACCGGTTAAAAAAATTAA+AGG + chr3_1:53351368-53351387 None:intergenic 25.0%
!!! GAATTCATGGTTTTAAAGTA+TGG - chr3_1:53351405-53351424 Msa0362330:CDS 25.0%
! TCCCCTATAAATCAAAATTA+AGG + chr3_1:53351604-53351623 None:intergenic 25.0%
!!! ATTTTGATTTATAGGGGAAT+TGG - chr3_1:53351606-53351625 Msa0362330:CDS 25.0%
!!! ACTGCACCTTTTTTTAAATA+AGG - chr3_1:53351669-53351688 Msa0362330:CDS 25.0%
!!! CTGCACCTTTTTTTAAATAA+GGG - chr3_1:53351670-53351689 Msa0362330:CDS 25.0%
!! TTGGTCCCTTATTTAAAAAA+AGG + chr3_1:53351678-53351697 None:intergenic 25.0%
! ACTAGAACAACAAATTACAA+AGG + chr3_1:53351745-53351764 None:intergenic 25.0%
!! GTACTATGTTACAATTTTAC+AGG - chr3_1:53351814-53351833 Msa0362330:intron 25.0%
!!! TAAACATACTGACTTGTTAT+TGG - chr3_1:53351861-53351880 Msa0362330:intron 25.0%
! TTCAATGATTGATTAGAACA+GGG + chr3_1:53352213-53352232 None:intergenic 25.0%
! TTTCAATGATTGATTAGAAC+AGG + chr3_1:53352214-53352233 None:intergenic 25.0%
! TGAAAATATTCAGTTAGAGA+AGG - chr3_1:53352274-53352293 Msa0362330:CDS 25.0%
! CACAAATTACTTGGATAAAT+TGG - chr3_1:53352731-53352750 Msa0362330:CDS 25.0%
! CAAATTACTTGGATAAATTG+GGG - chr3_1:53352733-53352752 Msa0362330:CDS 25.0%
! GTGGATAAAGAAATTTGATA+AGG - chr3_1:53352797-53352816 Msa0362330:CDS 25.0%
! CAAAAGACAATTTAAACAAG+AGG - chr3_1:53352973-53352992 Msa0362330:CDS 25.0%
! AAAGACAATTTAAACAAGAG+GGG - chr3_1:53352975-53352994 Msa0362330:CDS 25.0%
!!! TTTTTGATCTAGTTTTCCTT+TGG - chr3_1:53353209-53353228 Msa0362330:intron 25.0%
! AAAATTAAGCCACATTCTTA+TGG - chr3_1:53353301-53353320 Msa0362330:intron 25.0%
! AAATTAAGCCACATTCTTAT+GGG - chr3_1:53353302-53353321 Msa0362330:intron 25.0%
! AACAATTACAAGCATAATAG+AGG + chr3_1:53353385-53353404 None:intergenic 25.0%
!! AACATTTTTCTGCATAAGAA+GGG + chr3_1:53353480-53353499 None:intergenic 25.0%
!! TAACATTTTTCTGCATAAGA+AGG + chr3_1:53353481-53353500 None:intergenic 25.0%
! TATGTGATACCTTGAATATT+TGG + chr3_1:53353674-53353693 None:intergenic 25.0%
!! ACAATATTTATGGAGTATCA+TGG - chr3_1:53353723-53353742 Msa0362330:intron 25.0%
! CATCCATGTATATAAAAAAC+TGG - chr3_1:53353818-53353837 Msa0362330:intron 25.0%
!! TTTTTAACACTTTTGCATTG+TGG - chr3_1:53353936-53353955 Msa0362330:intron 25.0%
! ATATAGGTGGATAATGTTTA+TGG + chr3_1:53354140-53354159 None:intergenic 25.0%
! GAGTGGTTATAATATTGATA+GGG + chr3_1:53354166-53354185 None:intergenic 25.0%
! TGAGTGGTTATAATATTGAT+AGG + chr3_1:53354167-53354186 None:intergenic 25.0%
!!! TTGTTGTTTTTGATGATGTA+TGG - chr3_1:53355208-53355227 Msa0362330:intron 25.0%
! AACAAGGATTCCAATTTAAT+TGG - chr3_1:53355585-53355604 Msa0362330:intron 25.0%
! ACAAGGATTCCAATTTAATT+GGG - chr3_1:53355586-53355605 Msa0362330:intron 25.0%
! CTCTTTAATCCCAATTAAAT+TGG + chr3_1:53355598-53355617 None:intergenic 25.0%
!! AAACATGATCTAAGATAGTA+AGG + chr3_1:53355648-53355667 None:intergenic 25.0%
!!! AGATCATGTTTGTTGTATTT+TGG - chr3_1:53355657-53355676 Msa0362330:intron 25.0%
!! AGAGTTGATTAATAGAAGTT+TGG - chr3_1:53355800-53355819 Msa0362330:intron 25.0%
!! GATGATCTTTGAAAAATTTG+AGG - chr3_1:53355890-53355909 Msa0362330:intron 25.0%
! ATCAAATTGCCTATATTTCT+AGG + chr3_1:53356155-53356174 None:intergenic 25.0%
! TCTTTCATTAAATTGAAGGA+TGG - chr3_1:53356344-53356363 Msa0362330:intron 25.0%
! ATTAAATTGAAGGATGGTAT+TGG - chr3_1:53356350-53356369 Msa0362330:intron 25.0%
! AAATCTTGTTGAGTTAAAGT+TGG - chr3_1:53356688-53356707 Msa0362330:intron 25.0%
!! AGTTTGTATTTTCAAAATGG+AGG - chr3_1:53356806-53356825 Msa0362330:intron 25.0%
!! GTTTGTATTTTCAAAATGGA+GGG - chr3_1:53356807-53356826 Msa0362330:intron 25.0%
! GGTTTCAAAAAAAAAAACTG+AGG + chr3_1:53357605-53357624 None:intergenic 25.0%
! ATCTTGAATCAATAACTTTG+AGG + chr3_1:53357626-53357645 None:intergenic 25.0%
!!! AGTTATTGATTCAAGATTCT+TGG - chr3_1:53357629-53357648 Msa0362330:five_prime_UTR 25.0%
!!! TATATGATTTGTTGTTGTTC+TGG - chr3_1:53357798-53357817 Msa0362330:five_prime_UTR 25.0%
! CCAGTTATGTATAATTAAAC+TGG + chr3_1:53357861-53357880 None:intergenic 25.0%
! CCAGTTTAATTATACATAAC+TGG - chr3_1:53357858-53357877 Msa0362330:five_prime_UTR 25.0%
TGCAGCTTAAATATTTCAAG+TGG + chr3_1:53349573-53349592 None:intergenic 30.0%
TTTAAGCTGCAAGAATTCTT+CGG - chr3_1:53349582-53349601 Msa0362330:three_prime_UTR 30.0%
TAGGTTCTATGATATACCAA+AGG - chr3_1:53349684-53349703 Msa0362330:three_prime_UTR 30.0%
TTTCAATTGAAGGGTTGTAT+AGG - chr3_1:53349760-53349779 Msa0362330:three_prime_UTR 30.0%
GGATGGAATAGAGTTAATTA+AGG - chr3_1:53349837-53349856 Msa0362330:three_prime_UTR 30.0%
!!! TCAACCAGATTTTGAAACTT+GGG + chr3_1:53350105-53350124 None:intergenic 30.0%
ATCATCAACAATGCTTATGA+AGG - chr3_1:53350204-53350223 Msa0362330:intron 30.0%
! GAAAGTTTACATTTTCACGA+TGG - chr3_1:53350228-53350247 Msa0362330:intron 30.0%
ATGACAATTGAATGCAAGTT+AGG + chr3_1:53350294-53350313 None:intergenic 30.0%
CATTCAATTGTCATCAACAA+AGG - chr3_1:53350300-53350319 Msa0362330:intron 30.0%
TTAGGATAAAACTCTACACA+GGG + chr3_1:53350438-53350457 None:intergenic 30.0%
! TTTAGGATAAAACTCTACAC+AGG + chr3_1:53350439-53350458 None:intergenic 30.0%
! ATCCTAAACTTTAAGGACTA+AGG - chr3_1:53350451-53350470 Msa0362330:CDS 30.0%
!!! TTTTGTTGTTAATGTGTAGG+TGG - chr3_1:53350704-53350723 Msa0362330:CDS 30.0%
AGGTGATTATGTTCATGATT+TGG - chr3_1:53350783-53350802 Msa0362330:CDS 30.0%
!!! TGTCCCTTATCTTTATTTTG+AGG - chr3_1:53351013-53351032 Msa0362330:CDS 30.0%
!!! TATTTTGAGGTTCAAATCAG+TGG - chr3_1:53351026-53351045 Msa0362330:CDS 30.0%
TAATCACAAAGTAGTTAGGT+AGG + chr3_1:53351245-53351264 None:intergenic 30.0%
CTAGAAAAAATATTGAGGGT+GGG + chr3_1:53351322-53351341 None:intergenic 30.0%
GGAGCTAGAAAAAATATTGA+GGG + chr3_1:53351326-53351345 None:intergenic 30.0%
ATTAAAGGACCAATATGAAC+CGG + chr3_1:53351353-53351372 None:intergenic 30.0%
ATTGTTCAACGATTTCAGAA+AGG - chr3_1:53351466-53351485 Msa0362330:CDS 30.0%
! TTAATTTGGGTCGAAGAAAT+TGG - chr3_1:53351557-53351576 Msa0362330:CDS 30.0%
TAATTTGGGTCGAAGAAATT+GGG - chr3_1:53351558-53351577 Msa0362330:CDS 30.0%
!! CTTTATTTCGGTGTTCATAT+TGG + chr3_1:53351697-53351716 None:intergenic 30.0%
TGAACACCGAAATAAAGATA+AGG - chr3_1:53351700-53351719 Msa0362330:CDS 30.0%
GAACACCGAAATAAAGATAA+GGG - chr3_1:53351701-53351720 Msa0362330:CDS 30.0%
! TTGGTCCCTTATCTTTATTT+CGG + chr3_1:53351709-53351728 None:intergenic 30.0%
ATAAAGATAAGGGACCAAAA+AGG - chr3_1:53351711-53351730 Msa0362330:CDS 30.0%
ATAACTAAGAAAGTAGGAGT+TGG - chr3_1:53351900-53351919 Msa0362330:CDS 30.0%
TCCAACATAAAATGAGAATC+AGG - chr3_1:53351943-53351962 Msa0362330:CDS 30.0%
! ACCTGATTCTCATTTTATGT+TGG + chr3_1:53351947-53351966 None:intergenic 30.0%
GTTCCATAAAAAATCGAACT+CGG + chr3_1:53352070-53352089 None:intergenic 30.0%
ATGTAAGATGCACAAAAGTA+TGG - chr3_1:53352182-53352201 Msa0362330:CDS 30.0%
TCTACAAACTTGGTTATGAT+GGG + chr3_1:53352356-53352375 None:intergenic 30.0%
TTCTACAAACTTGGTTATGA+TGG + chr3_1:53352357-53352376 None:intergenic 30.0%
TAACACTTCTTCTACAAACT+TGG + chr3_1:53352366-53352385 None:intergenic 30.0%
AAAACAGTAAGCATAAACAG+TGG - chr3_1:53352419-53352438 Msa0362330:intron 30.0%
! GTGGTCAAATGCATTTTATT+TGG - chr3_1:53352438-53352457 Msa0362330:CDS 30.0%
ACGCTATAAAAGAACTATTG+AGG + chr3_1:53352577-53352596 None:intergenic 30.0%
!! TTTCAAAAGAGCATCAACAT+TGG - chr3_1:53352622-53352641 Msa0362330:CDS 30.0%
! AAATTTGATAAGGCTCTGAT+TGG - chr3_1:53352807-53352826 Msa0362330:CDS 30.0%
AGAGTTCTTTAAGCCAAATT+TGG - chr3_1:53352876-53352895 Msa0362330:CDS 30.0%
TCTTTAAGCCAAATTTGGAA+AGG - chr3_1:53352881-53352900 Msa0362330:CDS 30.0%
AAGGTCAATGAAGAAAAAGA+TGG + chr3_1:53353060-53353079 None:intergenic 30.0%
ATTGGATTGATGTTTATGAG+TGG - chr3_1:53353090-53353109 Msa0362330:intron 30.0%
ATTGATGTTTATGAGTGGTT+AGG - chr3_1:53353095-53353114 Msa0362330:intron 30.0%
! ATGACCCAATTTAGTGTTTT+GGG - chr3_1:53353155-53353174 Msa0362330:intron 30.0%
CAAAAAAAGAAGCTCATGTT+TGG + chr3_1:53353195-53353214 None:intergenic 30.0%
GTTCTTGACAAATAATCCAA+AGG + chr3_1:53353228-53353247 None:intergenic 30.0%
!! TTACTTTTAGTTACCACGTA+TGG - chr3_1:53353350-53353369 Msa0362330:intron 30.0%
! ATTCAAGGTATCACATAACA+TGG - chr3_1:53353677-53353696 Msa0362330:intron 30.0%
!! ATATGACATGTTGATGACAT+TGG + chr3_1:53353966-53353985 None:intergenic 30.0%
! CTTTTTGTACACATTGTAGT+TGG + chr3_1:53353997-53354016 None:intergenic 30.0%
AATGTTTATGGATAGCACTT+GGG + chr3_1:53354128-53354147 None:intergenic 30.0%
TAATGTTTATGGATAGCACT+TGG + chr3_1:53354129-53354148 None:intergenic 30.0%
ATTGATAGGGATTATATAGG+TGG + chr3_1:53354153-53354172 None:intergenic 30.0%
!!! TTTTGATTTGCTTGCTGAAT+TGG + chr3_1:53354302-53354321 None:intergenic 30.0%
TTCAGCAAGCAAATCAAAAT+AGG - chr3_1:53354303-53354322 Msa0362330:intron 30.0%
TCAGCAAGCAAATCAAAATA+GGG - chr3_1:53354304-53354323 Msa0362330:intron 30.0%
TGATCAATTGAGCAATCTTA+TGG + chr3_1:53354693-53354712 None:intergenic 30.0%
GTCATATGTTTGTATGATCA+AGG - chr3_1:53354762-53354781 Msa0362330:intron 30.0%
AAGGAAAGAAGTGAAAGATA+TGG - chr3_1:53354781-53354800 Msa0362330:intron 30.0%
GTGGAATACAAAATGCTAAA+TGG - chr3_1:53354830-53354849 Msa0362330:intron 30.0%
! CTTGCTATCAAAAACATTCT+TGG + chr3_1:53355007-53355026 None:intergenic 30.0%
!! CAAGAATGTTTTTGATAGCA+AGG - chr3_1:53355005-53355024 Msa0362330:intron 30.0%
TCTCAATCATACAGTATAGA+AGG - chr3_1:53355069-53355088 Msa0362330:intron 30.0%
CTCAATCATACAGTATAGAA+GGG - chr3_1:53355070-53355089 Msa0362330:intron 30.0%
! ATGTATGGAACATGCATTTT+TGG - chr3_1:53355223-53355242 Msa0362330:intron 30.0%
ACAGATTGTTCTTCAGTTAA+CGG + chr3_1:53355372-53355391 None:intergenic 30.0%
TGTGGAGTTGTTTAATAAGA+AGG - chr3_1:53355389-53355408 Msa0362330:intron 30.0%
! GATATATCAATGAGCTCTTT+TGG + chr3_1:53355438-53355457 None:intergenic 30.0%
ACTCAATTTCATAGTCTTCT+GGG + chr3_1:53355689-53355708 None:intergenic 30.0%
ATCTCTACGATTAACATTGA+TGG - chr3_1:53355828-53355847 Msa0362330:intron 30.0%
! ATTTCTAGGAACAGAATCAA+GGG + chr3_1:53356141-53356160 None:intergenic 30.0%
!! TATTTCTAGGAACAGAATCA+AGG + chr3_1:53356142-53356161 None:intergenic 30.0%
GATTCTGTTCCTAGAAATAT+AGG - chr3_1:53356143-53356162 Msa0362330:intron 30.0%
TTGAAGCAGTTAAGAGAATT+AGG - chr3_1:53356455-53356474 Msa0362330:intron 30.0%
! TCAACAAGATTTTGTAGCTT+TGG + chr3_1:53356680-53356699 None:intergenic 30.0%
AAACTAAAGGAACTAACCAT+TGG - chr3_1:53356836-53356855 Msa0362330:intron 30.0%
ATGCTTTGCACAAATTCATT+TGG + chr3_1:53357013-53357032 None:intergenic 30.0%
TACTTAAGGACAAAGAACTA+AGG - chr3_1:53357118-53357137 Msa0362330:five_prime_UTR 30.0%
TCCAAAAGAAAAGTAAAGTG+AGG + chr3_1:53357321-53357340 None:intergenic 30.0%
! CTACAACAAAAAAGCTTTTG+AGG + chr3_1:53357399-53357418 None:intergenic 30.0%
!! ATTTGTTGTTAATTGACAGG+TGG - chr3_1:53357464-53357483 Msa0362330:five_prime_UTR 30.0%
GTACTGTCTTTCTCTAATAA+TGG - chr3_1:53357570-53357589 Msa0362330:five_prime_UTR 30.0%
TTAAGCTGCAAGAATTCTTC+GGG - chr3_1:53349583-53349602 Msa0362330:three_prime_UTR 35.0%
!! TTGGAGCATTGCAATTGATT+TGG + chr3_1:53349629-53349648 None:intergenic 35.0%
TTGAGGCAGTTAAGGAAATT+GGG - chr3_1:53349871-53349890 Msa0362330:exon 35.0%
! TTAAGGAAATTGGGTTTGGT+TGG - chr3_1:53349880-53349899 Msa0362330:CDS 35.0%
!!! GTTTTAAGAGTTCGAAGCAT+AGG + chr3_1:53350048-53350067 None:intergenic 35.0%
TGCTTCGAACTCTTAAAACA+CGG - chr3_1:53350049-53350068 Msa0362330:intron 35.0%
GATTCCCAAGTTTCAAAATC+TGG - chr3_1:53350098-53350117 Msa0362330:intron 35.0%
!!! CTCAACCAGATTTTGAAACT+TGG + chr3_1:53350106-53350125 None:intergenic 35.0%
!! ATCTGGTTGAGTTGATGTTA+AGG - chr3_1:53350115-53350134 Msa0362330:intron 35.0%
!! AGCATTGTTGATGATTGAGA+GGG + chr3_1:53350199-53350218 None:intergenic 35.0%
!! AAGCATTGTTGATGATTGAG+AGG + chr3_1:53350200-53350219 None:intergenic 35.0%
! AGTTTACATTTTCACGATGG+AGG - chr3_1:53350231-53350250 Msa0362330:intron 35.0%
! GTTTACATTTTCACGATGGA+GGG - chr3_1:53350232-53350251 Msa0362330:intron 35.0%
AGCTTGAAGTTCTTGATGTT+TGG - chr3_1:53350406-53350425 Msa0362330:CDS 35.0%
GCTTGAAGTTCTTGATGTTT+GGG - chr3_1:53350407-53350426 Msa0362330:CDS 35.0%
CTCCTTAGTCCTTAAAGTTT+AGG + chr3_1:53350456-53350475 None:intergenic 35.0%
GCATATGCCATTGAATTTCA+AGG - chr3_1:53350483-53350502 Msa0362330:CDS 35.0%
TATGCCATTGAATTTCAAGG+AGG - chr3_1:53350486-53350505 Msa0362330:CDS 35.0%
ATGCCATTGAATTTCAAGGA+GGG - chr3_1:53350487-53350506 Msa0362330:CDS 35.0%
TTTCCCTCCTTGAAATTCAA+TGG + chr3_1:53350493-53350512 None:intergenic 35.0%
TGAATTTCAAGGAGGGAAAA+AGG - chr3_1:53350494-53350513 Msa0362330:CDS 35.0%
!! TTCAAGTGGACTTTTACAAC+AGG - chr3_1:53350759-53350778 Msa0362330:CDS 35.0%
!! TCAAGTGGACTTTTACAACA+GGG - chr3_1:53350760-53350779 Msa0362330:CDS 35.0%
!! TTGAGAGCTTTTTCCTTTCA+AGG - chr3_1:53350922-53350941 Msa0362330:CDS 35.0%
AAGGTCTTACAATCCTTGAA+AGG + chr3_1:53350938-53350957 None:intergenic 35.0%
ACGCTAATCACAAAGTAGTT+AGG + chr3_1:53351249-53351268 None:intergenic 35.0%
GCTAGAAAAAATATTGAGGG+TGG + chr3_1:53351323-53351342 None:intergenic 35.0%
CGGAGCTAGAAAAAATATTG+AGG + chr3_1:53351327-53351346 None:intergenic 35.0%
AACCATGAATTCGCATGAAA+AGG + chr3_1:53351397-53351416 None:intergenic 35.0%
GGATACATGTGAATTTGTGT+TGG - chr3_1:53351427-53351446 Msa0362330:CDS 35.0%
TTTCAGAAAGGAAGATGATG+AGG - chr3_1:53351478-53351497 Msa0362330:intron 35.0%
AATTTGGGTCGAAGAAATTG+GGG - chr3_1:53351559-53351578 Msa0362330:CDS 35.0%
TCGAAGAAATTGGGGATATA+TGG - chr3_1:53351567-53351586 Msa0362330:CDS 35.0%
CGAAGAAATTGGGGATATAT+GGG - chr3_1:53351568-53351587 Msa0362330:CDS 35.0%
TTATAGGGGAATTGGTAAAG+TGG - chr3_1:53351614-53351633 Msa0362330:CDS 35.0%
TATAGGGGAATTGGTAAAGT+GGG - chr3_1:53351615-53351634 Msa0362330:CDS 35.0%
! CAAAGGCTTAAACACCTTTT+TGG + chr3_1:53351728-53351747 None:intergenic 35.0%
!! ACTTGTTATTGGTACTTCAC+TGG - chr3_1:53351872-53351891 Msa0362330:intron 35.0%
!!! GAACCGAGTTCGATTTTTTA+TGG - chr3_1:53352064-53352083 Msa0362330:CDS 35.0%
GACTGAACTCTGAATTATGA+AGG - chr3_1:53352119-53352138 Msa0362330:intron 35.0%
! CTAGCTCAATTTTCAGAACA+GGG + chr3_1:53352249-53352268 None:intergenic 35.0%
!! TCTAGCTCAATTTTCAGAAC+AGG + chr3_1:53352250-53352269 None:intergenic 35.0%
GTTGAACAACTTGCAAAGTA+AGG + chr3_1:53352312-53352331 None:intergenic 35.0%
TGCAAGTTGTTCAACATATG+TGG - chr3_1:53352317-53352336 Msa0362330:CDS 35.0%
!! GGTTATGATGGGATTTTCAT+AGG + chr3_1:53352345-53352364 None:intergenic 35.0%
TAAAAAAAATTATGCGGCCG+AGG + chr3_1:53352677-53352696 None:intergenic 35.0%
! ATAAGGCTCTGATTGGTAAA+TGG - chr3_1:53352814-53352833 Msa0362330:CDS 35.0%
TAAGCCAAATTTGGAAAGGA+TGG - chr3_1:53352885-53352904 Msa0362330:CDS 35.0%
!! TTGACCTTTTTCGTCAAGAT+TGG - chr3_1:53353072-53353091 Msa0362330:intron 35.0%
CAATCCAATCTTGACGAAAA+AGG + chr3_1:53353079-53353098 None:intergenic 35.0%
ATGTGTTCCAAAATACGGTA+TGG + chr3_1:53353137-53353156 None:intergenic 35.0%
! CATGACCCAATTTAGTGTTT+TGG - chr3_1:53353154-53353173 Msa0362330:intron 35.0%
ACCACCCAAAACACTAAATT+GGG + chr3_1:53353162-53353181 None:intergenic 35.0%
AACCACCCAAAACACTAAAT+TGG + chr3_1:53353163-53353182 None:intergenic 35.0%
! GCTTAATTTTGTCAAGCAAG+TGG + chr3_1:53353291-53353310 None:intergenic 35.0%
AATATTTGGATCCTCTGTAG+CGG + chr3_1:53353660-53353679 None:intergenic 35.0%
ACAGAGGATCCAAATATTCA+AGG - chr3_1:53353662-53353681 Msa0362330:intron 35.0%
GATGCTCATAATAATACGCA+GGG + chr3_1:53353802-53353821 None:intergenic 35.0%
! TTTCTTCTCTCTGGTTTACA+AGG - chr3_1:53353901-53353920 Msa0362330:intron 35.0%
TGAACCTAATGACTCTTGTT+TGG - chr3_1:53354196-53354215 Msa0362330:intron 35.0%
TGCTGAATTGGTTATCTAGT+GGG + chr3_1:53354290-53354309 None:intergenic 35.0%
TTGCTGAATTGGTTATCTAG+TGG + chr3_1:53354291-53354310 None:intergenic 35.0%
!!! CTTTTGCAGCTTTGGATTTT+TGG + chr3_1:53354352-53354371 None:intergenic 35.0%
! AAAGAAGCCAATTTGCTTAG+AGG - chr3_1:53354442-53354461 Msa0362330:intron 35.0%
TGATGTATGCAAATTCCTTG+TGG + chr3_1:53354471-53354490 None:intergenic 35.0%
!!! TTCAACTGCAGCTCTTTTTT+CGG + chr3_1:53354533-53354552 None:intergenic 35.0%
TGGAGTGAATCTGGATATTT+GGG + chr3_1:53354673-53354692 None:intergenic 35.0%
ATGGAGTGAATCTGGATATT+TGG + chr3_1:53354674-53354693 None:intergenic 35.0%
TTGATTCTTGAGGTTGGATT+TGG + chr3_1:53354810-53354829 None:intergenic 35.0%
TGTATTCCACTTGATTCTTG+AGG + chr3_1:53354820-53354839 None:intergenic 35.0%
ATGGAGGAAATTGATGTTGT+GGG - chr3_1:53354874-53354893 Msa0362330:intron 35.0%
GAGTCTAGAGAAAGATTGAT+CGG - chr3_1:53354904-53354923 Msa0362330:intron 35.0%
AAAAACATTCTTGGCAAGAG+TGG + chr3_1:53354998-53355017 None:intergenic 35.0%
!! GAATGTTTTTGATAGCAAGG+AGG - chr3_1:53355008-53355027 Msa0362330:intron 35.0%
!!! GACATTTTGATTGTCGTGTA+TGG - chr3_1:53355037-53355056 Msa0362330:intron 35.0%
ATACTACGGAAATGGATAGA+AGG - chr3_1:53355139-53355158 Msa0362330:intron 35.0%
TAGAAGGTCATTAATCGATG+AGG - chr3_1:53355155-53355174 Msa0362330:intron 35.0%
GTTAACTGAAGAACAATCTG+TGG - chr3_1:53355371-53355390 Msa0362330:intron 35.0%
TAAAGATAAAAGACCTCCGA+TGG + chr3_1:53355508-53355527 None:intergenic 35.0%
GAGATAAAAATGCAATCGAG+TGG - chr3_1:53355529-53355548 Msa0362330:intron 35.0%
TCTACTCTTAGAGCTAAACA+AGG - chr3_1:53355569-53355588 Msa0362330:intron 35.0%
GACTCAATTTCATAGTCTTC+TGG + chr3_1:53355690-53355709 None:intergenic 35.0%
TAAGATACTACTTCGTCAGT+GGG - chr3_1:53355710-53355729 Msa0362330:intron 35.0%
GAAGACATTAGAAGAAGTTG+CGG - chr3_1:53355764-53355783 Msa0362330:intron 35.0%
ACTGACTGTCTTCACTAATA+TGG + chr3_1:53355932-53355951 None:intergenic 35.0%
!! TTGTTTCTATTGATAGACGG+CGG + chr3_1:53355974-53355993 None:intergenic 35.0%
GTATTGAAAGCTCACATGTT+CGG - chr3_1:53356015-53356034 Msa0362330:intron 35.0%
TATTGAAAGCTCACATGTTC+GGG - chr3_1:53356016-53356035 Msa0362330:intron 35.0%
AAAAGCCTTCCAAAATCCAT+TGG - chr3_1:53356212-53356231 Msa0362330:intron 35.0%
! TAATCTCTTTTGGCATCTCA+TGG + chr3_1:53356283-53356302 None:intergenic 35.0%
!!! CTAAGCTTGCTAATCTCTTT+TGG + chr3_1:53356293-53356312 None:intergenic 35.0%
TTCGAGATCTTAGACTGTAT+GGG - chr3_1:53356627-53356646 Msa0362330:intron 35.0%
! CATTGGATCATCGGTTATTT+GGG + chr3_1:53356720-53356739 None:intergenic 35.0%
TAGTGATTCCATTGGATCAT+CGG + chr3_1:53356729-53356748 None:intergenic 35.0%
AACTTTCACCTTCATAACCA+TGG + chr3_1:53356790-53356809 None:intergenic 35.0%
CAAGGAAGATGAATTTCCAA+TGG + chr3_1:53356855-53356874 None:intergenic 35.0%
TGTTCCATCATCATTGACAA+AGG - chr3_1:53356875-53356894 Msa0362330:intron 35.0%
TGATCCTTTGTCAATGATGA+TGG + chr3_1:53356882-53356901 None:intergenic 35.0%
CTTGAAGCTTCTTTAAGTGT+TGG + chr3_1:53356970-53356989 None:intergenic 35.0%
! AGCTTCAAGTTCTCAGTATT+TGG - chr3_1:53356981-53357000 Msa0362330:five_prime_UTR 35.0%
! GCTTCAAGTTCTCAGTATTT+GGG - chr3_1:53356982-53357001 Msa0362330:five_prime_UTR 35.0%
GCAGGATAAAACTCTACAAA+GGG + chr3_1:53357079-53357098 None:intergenic 35.0%
AGCAGGATAAAACTCTACAA+AGG + chr3_1:53357080-53357099 None:intergenic 35.0%
!! TTTGTAGAGTTTTATCCTGC+TGG - chr3_1:53357079-53357098 Msa0362330:five_prime_UTR 35.0%
GCAAATCTGTTCGATACTTA+AGG - chr3_1:53357104-53357123 Msa0362330:five_prime_UTR 35.0%
AAGGACAAAGAACTAAGGTA+TGG - chr3_1:53357123-53357142 Msa0362330:five_prime_UTR 35.0%
GGTTCTATCATCAAACAAAC+TGG - chr3_1:53357195-53357214 Msa0362330:five_prime_UTR 35.0%
!! GCCTCACTTTACTTTTCTTT+TGG - chr3_1:53357317-53357336 Msa0362330:five_prime_UTR 35.0%
!!! GGAGAGCTTTTTTTCTTTCA+AGG - chr3_1:53357706-53357725 Msa0362330:five_prime_UTR 35.0%
TAAGCTGCAAGAATTCTTCG+GGG - chr3_1:53349584-53349603 Msa0362330:three_prime_UTR 40.0%
ATCTAAGGGGGGTTAATGTT+AGG - chr3_1:53349665-53349684 Msa0362330:three_prime_UTR 40.0%
CTGAACATTCTAGTCTCCTT+TGG + chr3_1:53349703-53349722 None:intergenic 40.0%
! AGAAAGCTGCGACATTTTCA+TGG - chr3_1:53349721-53349740 Msa0362330:three_prime_UTR 40.0%
CAATTGAAGGGTTGTATAGG+AGG - chr3_1:53349763-53349782 Msa0362330:three_prime_UTR 40.0%
GGAAATAGATAGCAACTGTG+AGG - chr3_1:53349816-53349835 Msa0362330:three_prime_UTR 40.0%
ATAGATAGCAACTGTGAGGA+TGG - chr3_1:53349820-53349839 Msa0362330:three_prime_UTR 40.0%
TTAAGGAGTTGGGAAAGTTG+AGG - chr3_1:53349854-53349873 Msa0362330:three_prime_UTR 40.0%
GTTGAGGCAGTTAAGGAAAT+TGG - chr3_1:53349870-53349889 Msa0362330:exon 40.0%
GCAGTTAAGGAAATTGGGTT+TGG - chr3_1:53349876-53349895 Msa0362330:CDS 40.0%
!! GTTGGTGTTAGAAGAGAACA+TGG - chr3_1:53349898-53349917 Msa0362330:CDS 40.0%
CTGCGCATTGGGAAAAAATT+TGG - chr3_1:53349967-53349986 Msa0362330:intron 40.0%
TAAGAGTTCGAAGCATAGGA+GGG + chr3_1:53350044-53350063 None:intergenic 40.0%
TTAAGAGTTCGAAGCATAGG+AGG + chr3_1:53350045-53350064 None:intergenic 40.0%
GCTTCGAACTCTTAAAACAC+GGG - chr3_1:53350050-53350069 Msa0362330:intron 40.0%
AGTTGACGAAGTTTCCAGAA+TGG - chr3_1:53350076-53350095 Msa0362330:intron 40.0%
TGAAACTTGGGAATCCATTC+TGG + chr3_1:53350093-53350112 None:intergenic 40.0%
TGGAGGGTTACGAAATCTAA+AGG - chr3_1:53350248-53350267 Msa0362330:intron 40.0%
GTTGTTAATGTGTAGGTGGT+TGG - chr3_1:53350708-53350727 Msa0362330:intron 40.0%
! TTTGAGGTTCAAATCAGTGG+CGG - chr3_1:53351029-53351048 Msa0362330:CDS 40.0%
TGTCTAACGTAACAGAGGAA+GGG + chr3_1:53351189-53351208 None:intergenic 40.0%
AGTTGTGTCTAACGTAACAG+AGG + chr3_1:53351194-53351213 None:intergenic 40.0%
AATTCGCATGAAAAGGACTG+TGG + chr3_1:53351390-53351409 None:intergenic 40.0%
! GTCCTTTTCATGCGAATTCA+TGG - chr3_1:53351392-53351411 Msa0362330:CDS 40.0%
TCGTTGAACAATGATGCAGA+GGG + chr3_1:53351458-53351477 None:intergenic 40.0%
ATCGTTGAACAATGATGCAG+AGG + chr3_1:53351459-53351478 None:intergenic 40.0%
ACTTGACATGTTTGCTCAGA+TGG - chr3_1:53351512-53351531 Msa0362330:intron 40.0%
CTTGACATGTTTGCTCAGAT+GGG - chr3_1:53351513-53351532 Msa0362330:intron 40.0%
GCTCAGATGGGAAAAAAGAT+TGG - chr3_1:53351525-53351544 Msa0362330:intron 40.0%
TAATTCAGAGTTCAGTCGTG+AGG + chr3_1:53352116-53352135 None:intergenic 40.0%
! TTATGAAGGTCCTCTTTTCC+TGG - chr3_1:53352133-53352152 Msa0362330:intron 40.0%
! TATGAAGGTCCTCTTTTCCT+GGG - chr3_1:53352134-53352153 Msa0362330:intron 40.0%
! TTGCAAAGTAAGGCGTTAGA+AGG + chr3_1:53352302-53352321 None:intergenic 40.0%
ACGCAAGCAGAAATACAACT+AGG - chr3_1:53352546-53352565 Msa0362330:CDS 40.0%
CGCAAGCAGAAATACAACTA+GGG - chr3_1:53352547-53352566 Msa0362330:CDS 40.0%
GCAAGCAGAAATACAACTAG+GGG - chr3_1:53352548-53352567 Msa0362330:CDS 40.0%
! CAAGTAATTTGTGCTGCTGA+CGG + chr3_1:53352724-53352743 None:intergenic 40.0%
!! CTTGCTCTAGGAAAGAGAAA+GGG - chr3_1:53352761-53352780 Msa0362330:CDS 40.0%
!! TTGCTCTAGGAAAGAGAAAG+GGG - chr3_1:53352762-53352781 Msa0362330:CDS 40.0%
CTCTGATTGGTAAATGGTGT+TGG - chr3_1:53352820-53352839 Msa0362330:intron 40.0%
! TGATTGGTAAATGGTGTTGG+AGG - chr3_1:53352823-53352842 Msa0362330:intron 40.0%
! ATGGTGTTGGAGGTTAAAGA+AGG - chr3_1:53352833-53352852 Msa0362330:intron 40.0%
! TGGTGTTGGAGGTTAAAGAA+GGG - chr3_1:53352834-53352853 Msa0362330:intron 40.0%
ACGACCATCCTTTCCAAATT+TGG + chr3_1:53352892-53352911 None:intergenic 40.0%
GTCGTATGTTGTGTATGGAA+GGG - chr3_1:53352907-53352926 Msa0362330:CDS 40.0%
TCGTATGTTGTGTATGGAAG+GGG - chr3_1:53352908-53352927 Msa0362330:CDS 40.0%
AATACGGTATGGAACTACCA+TGG + chr3_1:53353126-53353145 None:intergenic 40.0%
! GGTAGTTCCATACCGTATTT+TGG - chr3_1:53353127-53353146 Msa0362330:intron 40.0%
GGGTCATGTGTTCCAAAATA+CGG + chr3_1:53353142-53353161 None:intergenic 40.0%
!! ACCCAATTTAGTGTTTTGGG+TGG - chr3_1:53353158-53353177 Msa0362330:intron 40.0%
TTAAGCCACATTCTTATGGG+TGG - chr3_1:53353305-53353324 Msa0362330:intron 40.0%
AAGTTGACATGTTTCGCCTT+TGG + chr3_1:53353331-53353350 None:intergenic 40.0%
!! CTTTTAGTTACCACGTATGG+TGG - chr3_1:53353353-53353372 Msa0362330:intron 40.0%
TTCTGCATAAGAAGGGCTAA+AGG + chr3_1:53353473-53353492 None:intergenic 40.0%
ATATTTGGATCCTCTGTAGC+GGG + chr3_1:53353659-53353678 None:intergenic 40.0%
GGATGCTCATAATAATACGC+AGG + chr3_1:53353803-53353822 None:intergenic 40.0%
TTTGTACACGTGTGACATTG+TGG - chr3_1:53354069-53354088 Msa0362330:intron 40.0%
! GAAAACACTTGGTGACATTG+GGG + chr3_1:53354100-53354119 None:intergenic 40.0%
! GGAAAACACTTGGTGACATT+GGG + chr3_1:53354101-53354120 None:intergenic 40.0%
! TGGAAAACACTTGGTGACAT+TGG + chr3_1:53354102-53354121 None:intergenic 40.0%
GTGTCCAAACAAGAGTCATT+AGG + chr3_1:53354203-53354222 None:intergenic 40.0%
!!! TGCAGCTTTGGATTTTTGGT+TGG + chr3_1:53354348-53354367 None:intergenic 40.0%
TTGGCTTCTTTCCTTAACAG+TGG + chr3_1:53354433-53354452 None:intergenic 40.0%
GTGGATACCTCTAAGCAAAT+TGG + chr3_1:53354452-53354471 None:intergenic 40.0%
!! TTTGCTTAGAGGTATCCACA+AGG - chr3_1:53354453-53354472 Msa0362330:intron 40.0%
GAAAAAAGAGCTGCAGTTGA+AGG - chr3_1:53354532-53354551 Msa0362330:intron 40.0%
GCAATCTTATGGAGTGAATC+TGG + chr3_1:53354682-53354701 None:intergenic 40.0%
ATCCAACCTCAAGAATCAAG+TGG - chr3_1:53354811-53354830 Msa0362330:intron 40.0%
TTCCACTTGATTCTTGAGGT+TGG + chr3_1:53354816-53354835 None:intergenic 40.0%
TAAATGGTATGACCCTCGAT+TGG - chr3_1:53354846-53354865 Msa0362330:intron 40.0%
CATGGAGGAAATTGATGTTG+TGG - chr3_1:53354873-53354892 Msa0362330:intron 40.0%
! TTTGATAGCAAGGAGGTTAG+TGG - chr3_1:53355015-53355034 Msa0362330:intron 40.0%
ACAGTATAGAAGGGTTGTTG+AGG - chr3_1:53355079-53355098 Msa0362330:intron 40.0%
CAGTATAGAAGGGTTGTTGA+GGG - chr3_1:53355080-53355099 Msa0362330:intron 40.0%
GAAACTACTTGCAGCAAAAG+AGG - chr3_1:53355181-53355200 Msa0362330:intron 40.0%
AAAATGCAATCGAGTGGAAG+AGG - chr3_1:53355535-53355554 Msa0362330:intron 40.0%
CTAAGATACTACTTCGTCAG+TGG - chr3_1:53355709-53355728 Msa0362330:intron 40.0%
AGGGTTTGTGAAAGAGGAAA+AGG - chr3_1:53355740-53355759 Msa0362330:intron 40.0%
GGGTTTGTGAAAGAGGAAAA+GGG - chr3_1:53355741-53355760 Msa0362330:intron 40.0%
GGTTTGTGAAAGAGGAAAAG+GGG - chr3_1:53355742-53355761 Msa0362330:intron 40.0%
ACGGCGGTATTGTTTACTTA+AGG + chr3_1:53355958-53355977 None:intergenic 40.0%
! CATCCAAAGTCTCTAGGTTT+TGG + chr3_1:53356244-53356263 None:intergenic 40.0%
CTCTTACATCCAAAGTCTCT+AGG + chr3_1:53356250-53356269 None:intergenic 40.0%
CTAGAGACTTTGGATGTAAG+AGG - chr3_1:53356248-53356267 Msa0362330:intron 40.0%
AGAAAGCTACTACATCTTCG+AGG - chr3_1:53356311-53356330 Msa0362330:intron 40.0%
AGATGTAGTAGAGCTATTCC+AGG - chr3_1:53356421-53356440 Msa0362330:intron 40.0%
!!! GCTTCAACTTTTTTAGCTCC+TGG + chr3_1:53356442-53356461 None:intergenic 40.0%
GCAGTTAAGAGAATTAGGCT+TGG - chr3_1:53356460-53356479 Msa0362330:intron 40.0%
ACTCAATGAGATGCAACACT+TGG - chr3_1:53356523-53356542 Msa0362330:intron 40.0%
! AGTCTAAGATCTCGAAGCAT+TGG + chr3_1:53356623-53356642 None:intergenic 40.0%
CTTCGAGATCTTAGACTGTA+TGG - chr3_1:53356626-53356645 Msa0362330:intron 40.0%
! CCATTGGATCATCGGTTATT+TGG + chr3_1:53356721-53356740 None:intergenic 40.0%
CCAAATAACCGATGATCCAA+TGG - chr3_1:53356718-53356737 Msa0362330:intron 40.0%
!! CACTTGCTGTCACTCTATAT+TGG - chr3_1:53356761-53356780 Msa0362330:intron 40.0%
TTTCACCTTCATAACCATGG+TGG + chr3_1:53356787-53356806 None:intergenic 40.0%
TGGAGGGTTTCACAAACTAA+AGG - chr3_1:53356823-53356842 Msa0362330:intron 40.0%
!! GTCAATGATGATGGAACACA+AGG + chr3_1:53356873-53356892 None:intergenic 40.0%
CTCTTAGAAAGCTCGAGTTA+TGG - chr3_1:53356909-53356928 Msa0362330:intron 40.0%
AAACTCAAGACTGTACCTAC+CGG - chr3_1:53356941-53356960 Msa0362330:exon 40.0%
!! CTTCTTTAAGTGTTGGATGC+CGG + chr3_1:53356963-53356982 None:intergenic 40.0%
!! CAAAGCATTGCTCCAAATGA+AGG - chr3_1:53357025-53357044 Msa0362330:five_prime_UTR 40.0%
! CAGTGCTCTTTTCCTTCATT+TGG + chr3_1:53357040-53357059 None:intergenic 40.0%
! CAAATGAAGGAAAAGAGCAC+TGG - chr3_1:53357038-53357057 Msa0362330:five_prime_UTR 40.0%
TATAGTTCAGTCGACTGTAG+AGG - chr3_1:53357236-53357255 Msa0362330:five_prime_UTR 40.0%
ATTTCTCTGCTCAGTGTGAA+AGG + chr3_1:53357423-53357442 None:intergenic 40.0%
AACGGTTGTACAAGTACACT+TGG + chr3_1:53357516-53357535 None:intergenic 40.0%
AAGCTGCAAGAATTCTTCGG+GGG - chr3_1:53349585-53349604 Msa0362330:three_prime_UTR 45.0%
! GATCCAAGGTCTCTAGGTTT+TGG + chr3_1:53349648-53349667 None:intergenic 45.0%
ACCTAGAGACCTTGGATCTA+AGG - chr3_1:53349650-53349669 Msa0362330:three_prime_UTR 45.0%
CCTAGAGACCTTGGATCTAA+GGG - chr3_1:53349651-53349670 Msa0362330:three_prime_UTR 45.0%
CTAGAGACCTTGGATCTAAG+GGG - chr3_1:53349652-53349671 Msa0362330:three_prime_UTR 45.0%
TAGAGACCTTGGATCTAAGG+GGG - chr3_1:53349653-53349672 Msa0362330:three_prime_UTR 45.0%
ATTAACCCCCCTTAGATCCA+AGG + chr3_1:53349662-53349681 None:intergenic 45.0%
ATCGCTACAAACGCTAAGTG+AGG - chr3_1:53349792-53349811 Msa0362330:three_prime_UTR 45.0%
TGGGAAAGTTGAGGCAGTTA+AGG - chr3_1:53349863-53349882 Msa0362330:exon 45.0%
GTGTCGCAGCTCATTCAATA+CGG + chr3_1:53349938-53349957 None:intergenic 45.0%
ATTGAATGAGCTGCGACACT+TGG - chr3_1:53349939-53349958 Msa0362330:intron 45.0%
ACTTGGAGAAACTGCGCATT+GGG - chr3_1:53349956-53349975 Msa0362330:intron 45.0%
AAGAGTTCGAAGCATAGGAG+GGG + chr3_1:53350043-53350062 None:intergenic 45.0%
TAGTATCCCCAACCTCAAGA+CGG - chr3_1:53350356-53350375 Msa0362330:CDS 45.0%
!! TCTAAGTGTCGAATGCCATC+TGG + chr3_1:53350384-53350403 None:intergenic 45.0%
!! AGTGGACTTTTACAACAGGG+AGG - chr3_1:53350763-53350782 Msa0362330:CDS 45.0%
GTCTAACGTAACAGAGGAAG+GGG + chr3_1:53351188-53351207 None:intergenic 45.0%
GTGTCTAACGTAACAGAGGA+AGG + chr3_1:53351190-53351209 None:intergenic 45.0%
! GTAGGTCGCGTTTTCAAAGA+GGG + chr3_1:53351227-53351246 None:intergenic 45.0%
!!! ATTTTTTCTAGCTCCGCCAC+CGG - chr3_1:53351331-53351350 Msa0362330:CDS 45.0%
AAAGGACCAATATGAACCGG+TGG + chr3_1:53351350-53351369 None:intergenic 45.0%
CATGAAAAGGACTGTGGTAC+CGG + chr3_1:53351384-53351403 None:intergenic 45.0%
TTGAACAATGATGCAGAGGG+TGG + chr3_1:53351455-53351474 None:intergenic 45.0%
!! GTACAGTCGGTGTTGAAGTT+TGG + chr3_1:53351988-53352007 None:intergenic 45.0%
CCTCAATCACATGGTACAGT+CGG + chr3_1:53352001-53352020 None:intergenic 45.0%
ACCATGTGATTGAGGTCAAG+TGG - chr3_1:53352006-53352025 Msa0362330:CDS 45.0%
ACCACTTGACCTCAATCACA+TGG + chr3_1:53352010-53352029 None:intergenic 45.0%
!!! TTTTTTTCCCTCCAGTTCCC+AGG + chr3_1:53352154-53352173 None:intergenic 45.0%
AACGCTCATTGCTATAGCCT+CGG - chr3_1:53352657-53352676 Msa0362330:intron 45.0%
CGTCAGCAGCACAAATTACT+TGG - chr3_1:53352722-53352741 Msa0362330:CDS 45.0%
!! GCTTGCTCTAGGAAAGAGAA+AGG - chr3_1:53352760-53352779 Msa0362330:CDS 45.0%
!! TGCTCTAGGAAAGAGAAAGG+GGG - chr3_1:53352763-53352782 Msa0362330:CDS 45.0%
TAGGAAAGAGAAAGGGGGTT+GGG - chr3_1:53352768-53352787 Msa0362330:CDS 45.0%
! GGTGTTGGAGGTTAAAGAAG+GGG - chr3_1:53352835-53352854 Msa0362330:intron 45.0%
! AGAAGGGGCGATCTAGTTTA+TGG - chr3_1:53352850-53352869 Msa0362330:CDS 45.0%
GGATGGTCGTATGTTGTGTA+TGG - chr3_1:53352902-53352921 Msa0362330:CDS 45.0%
GGTCGTATGTTGTGTATGGA+AGG - chr3_1:53352906-53352925 Msa0362330:CDS 45.0%
ATGTTGTGTATGGAAGGGGA+AGG - chr3_1:53352912-53352931 Msa0362330:CDS 45.0%
TGTTGTGTATGGAAGGGGAA+GGG - chr3_1:53352913-53352932 Msa0362330:CDS 45.0%
AAGGGGAAGGGAGATCAATT+TGG - chr3_1:53352925-53352944 Msa0362330:CDS 45.0%
CAATCTTGCGTGGGAAATTG+TGG - chr3_1:53353016-53353035 Msa0362330:CDS 45.0%
TTTGGCCACCCATAAGAATG+TGG + chr3_1:53353313-53353332 None:intergenic 45.0%
ACATTCTTATGGGTGGCCAA+AGG - chr3_1:53353312-53353331 Msa0362330:intron 45.0%
! GCGAGACTATCAAGTTGCAT+AGG + chr3_1:53353609-53353628 None:intergenic 45.0%
GGTTCACAATACATCAGACC+AGG + chr3_1:53353638-53353657 None:intergenic 45.0%
TAGGGAAGCTTTCTTCTCTC+TGG - chr3_1:53353892-53353911 Msa0362330:intron 45.0%
!! CTTGGGTGATGGAAAACACT+TGG + chr3_1:53354111-53354130 None:intergenic 45.0%
TATGGATAGCACTTGGGTGA+TGG + chr3_1:53354122-53354141 None:intergenic 45.0%
! TCTTGTTTGGACACTACTCG+TGG - chr3_1:53354209-53354228 Msa0362330:intron 45.0%
TCCAAAGCTGCAAAAGTGAG+AGG - chr3_1:53354356-53354375 Msa0362330:intron 45.0%
!! ACCTCTCACTTTTGCAGCTT+TGG + chr3_1:53354360-53354379 None:intergenic 45.0%
AAGTGAGAGGTTGACTGCAA+TGG - chr3_1:53354369-53354388 Msa0362330:intron 45.0%
GTTGACTGCAATGGCTGAAA+TGG - chr3_1:53354378-53354397 Msa0362330:intron 45.0%
AGCAACTGCTTCCACTGTTA+AGG - chr3_1:53354419-53354438 Msa0362330:intron 45.0%
TCCGTGAAGGGGTCAAAATA+TGG - chr3_1:53354563-53354582 Msa0362330:intron 45.0%
!!! CCCATATTTTGACCCCTTCA+CGG + chr3_1:53354567-53354586 None:intergenic 45.0%
CCGTGAAGGGGTCAAAATAT+GGG - chr3_1:53354564-53354583 Msa0362330:intron 45.0%
GGTCAAAATATGGGTGAAGC+AGG - chr3_1:53354573-53354592 Msa0362330:intron 45.0%
ATATGGGTGAAGCAGGTGAT+AGG - chr3_1:53354580-53354599 Msa0362330:intron 45.0%
! TCTGGATATTTGGGATGACG+AGG + chr3_1:53354664-53354683 None:intergenic 45.0%
GAATCTCTGACCCAATTCGA+TGG + chr3_1:53354732-53354751 None:intergenic 45.0%
CTAGAGAAAGATTGATCGGC+TGG - chr3_1:53354908-53354927 Msa0362330:intron 45.0%
AGAAAGATTGATCGGCTGGT+TGG - chr3_1:53354912-53354931 Msa0362330:intron 45.0%
!! TTGATCGGCTGGTTGGTAAA+AGG - chr3_1:53354919-53354938 Msa0362330:intron 45.0%
GTTTCACAAGTCTTTGCCTC+AGG - chr3_1:53355116-53355135 Msa0362330:intron 45.0%
GTCTTTGCCTCAGGATACTA+CGG - chr3_1:53355125-53355144 Msa0362330:intron 45.0%
TCCATTTCCGTAGTATCCTG+AGG + chr3_1:53355135-53355154 None:intergenic 45.0%
CCACTAGCAATTGTTGCCAT+CGG - chr3_1:53355489-53355508 Msa0362330:intron 45.0%
AGCTGAAGGGTTTGTGAAAG+AGG - chr3_1:53355734-53355753 Msa0362330:intron 45.0%
!! GCATGCCAATGGATTTTGGA+AGG + chr3_1:53356220-53356239 None:intergenic 45.0%
!! TGGAGCATGCCAATGGATTT+TGG + chr3_1:53356224-53356243 None:intergenic 45.0%
!!! TAGGTTTTGGAGCATGCCAA+TGG + chr3_1:53356231-53356250 None:intergenic 45.0%
GCTCCAAAACCTAGAGACTT+TGG - chr3_1:53356238-53356257 Msa0362330:intron 45.0%
GTTCGTCTTAGAAGAGAGCA+TGG - chr3_1:53356482-53356501 Msa0362330:intron 45.0%
!! CTAAGATCTCGAAGCATTGG+TGG + chr3_1:53356620-53356639 None:intergenic 45.0%
TCACTCTATATTGGCCACCA+TGG - chr3_1:53356770-53356789 Msa0362330:intron 45.0%
ATTGGCCACCATGGTTATGA+AGG - chr3_1:53356779-53356798 Msa0362330:intron 45.0%
GGTAGGTACAGTCTTGAGTT+TGG + chr3_1:53356942-53356961 None:intergenic 45.0%
!! TTTAAGTGTTGGATGCCGGT+AGG + chr3_1:53356959-53356978 None:intergenic 45.0%
! TACAAAGGGCACATGCTGAA+TGG + chr3_1:53357065-53357084 None:intergenic 45.0%
!! GTAGAGTTTTATCCTGCTGG+CGG - chr3_1:53357082-53357101 Msa0362330:five_prime_UTR 45.0%
TCAGTCGACTGTAGAGGATT+CGG - chr3_1:53357242-53357261 Msa0362330:five_prime_UTR 45.0%
AGTACACTTGGAGCAATCAC+TGG + chr3_1:53357504-53357523 None:intergenic 45.0%
GTGTACTTGTACAACCGTTG+CGG - chr3_1:53357517-53357536 Msa0362330:five_prime_UTR 45.0%
!!! AAAAAAAATTATTTTTTTTG+GGG + chr3_1:53351089-53351108 None:intergenic 5.0%
!!! GAAAAAAAATTATTTTTTTT+GGG + chr3_1:53351090-53351109 None:intergenic 5.0%
!!! AGAAAAAAAATTATTTTTTT+TGG + chr3_1:53351091-53351110 None:intergenic 5.0%
!!! AAAAATAATTTTTTTTCTAT+AGG - chr3_1:53351093-53351112 Msa0362330:CDS 5.0%
!!! AAAATAATTTTTTTTCTATA+GGG - chr3_1:53351094-53351113 Msa0362330:CDS 5.0%
!!! ATATAATTCTATTTTTTTTT+TGG - chr3_1:53353508-53353527 Msa0362330:intron 5.0%
!!! ATAAATAGTTTTTTTTTTTT+AGG - chr3_1:53353873-53353892 Msa0362330:intron 5.0%
!!! TAAATAGTTTTTTTTTTTTA+GGG - chr3_1:53353874-53353893 Msa0362330:intron 5.0%
TGCAAGAATTCTTCGGGGGA+TGG - chr3_1:53349589-53349608 Msa0362330:three_prime_UTR 50.0%
GCTCCAAAACCTAGAGACCT+TGG - chr3_1:53349642-53349661 Msa0362330:three_prime_UTR 50.0%
CCCTTAGATCCAAGGTCTCT+AGG + chr3_1:53349654-53349673 None:intergenic 50.0%
AGAGACCTTGGATCTAAGGG+GGG - chr3_1:53349654-53349673 Msa0362330:three_prime_UTR 50.0%
GAAGGGTTGTATAGGAGGCA+TGG - chr3_1:53349768-53349787 Msa0362330:three_prime_UTR 50.0%
GCTACAAACGCTAAGTGAGG+TGG - chr3_1:53349795-53349814 Msa0362330:three_prime_UTR 50.0%
CACTTGGAGAAACTGCGCAT+TGG - chr3_1:53349955-53349974 Msa0362330:intron 50.0%
!! GAGTTGATGTTAAGGCGCTC+CGG - chr3_1:53350123-53350142 Msa0362330:intron 50.0%
! TCTGGAACCGTCTTGAGGTT+GGG + chr3_1:53350366-53350385 None:intergenic 50.0%
! ATCTGGAACCGTCTTGAGGT+TGG + chr3_1:53350367-53350386 None:intergenic 50.0%
AACCTCAAGACGGTTCCAGA+TGG - chr3_1:53350366-53350385 Msa0362330:CDS 50.0%
! ATCAGTGGCGGAGGCTTTAA+AGG - chr3_1:53351041-53351060 Msa0362330:CDS 50.0%
!! TCAGTGGCGGAGGCTTTAAA+GGG - chr3_1:53351042-53351061 Msa0362330:CDS 50.0%
!! AGGCTTTAAAGGGCTGAGGA+GGG - chr3_1:53351052-53351071 Msa0362330:CDS 50.0%
CGTAACAGAGGAAGGGGAAA+AGG + chr3_1:53351182-53351201 None:intergenic 50.0%
! GGTAGGTCGCGTTTTCAAAG+AGG + chr3_1:53351228-53351247 None:intergenic 50.0%
CCGACTGTACCATGTGATTG+AGG - chr3_1:53351998-53352017 Msa0362330:CDS 50.0%
! CTCTTTTCCTGGGAACTGGA+GGG - chr3_1:53352144-53352163 Msa0362330:intron 50.0%
GAGGCTATAGCAATGAGCGT+TGG + chr3_1:53352658-53352677 None:intergenic 50.0%
ATTGGGGTAGTGCTTGCTCT+AGG - chr3_1:53352749-53352768 Msa0362330:CDS 50.0%
CTAGGAAAGAGAAAGGGGGT+TGG - chr3_1:53352767-53352786 Msa0362330:CDS 50.0%
AGGAAAGAGAAAGGGGGTTG+GGG - chr3_1:53352769-53352788 Msa0362330:CDS 50.0%
GGGAAGGGAGATCAATTTGG+TGG - chr3_1:53352928-53352947 Msa0362330:CDS 50.0%
AGCTACTGCTCAATCTTGCG+TGG - chr3_1:53353006-53353025 Msa0362330:CDS 50.0%
GCTACTGCTCAATCTTGCGT+GGG - chr3_1:53353007-53353026 Msa0362330:CDS 50.0%
GAGGATTGATCCACCATACG+TGG + chr3_1:53353366-53353385 None:intergenic 50.0%
TGATAGTCTCGCTCTGTTCC+TGG - chr3_1:53353617-53353636 Msa0362330:intron 50.0%
GTATTGTGAACCCGCTACAG+AGG - chr3_1:53353646-53353665 Msa0362330:intron 50.0%
AGGTTCACGCATGTGATGAG+TGG + chr3_1:53354183-53354202 None:intergenic 50.0%
GGCTGAAATGGCTGTGAGTT+TGG - chr3_1:53354390-53354409 Msa0362330:intron 50.0%
AAGGAGACAACGTCCGTGAA+GGG - chr3_1:53354551-53354570 Msa0362330:intron 50.0%
! TTGGGATGACGAGGTTTTCG+TGG + chr3_1:53354655-53354674 None:intergenic 50.0%
TTGATCCCTCGCCATCGAAT+TGG - chr3_1:53354718-53354737 Msa0362330:intron 50.0%
TGATCCCTCGCCATCGAATT+GGG - chr3_1:53354719-53354738 Msa0362330:intron 50.0%
! TGACCCTCGATTGGTTCACA+TGG - chr3_1:53354855-53354874 Msa0362330:intron 50.0%
CCTCCATGTGAACCAATCGA+GGG + chr3_1:53354861-53354880 None:intergenic 50.0%
TCCTCCATGTGAACCAATCG+AGG + chr3_1:53354862-53354881 None:intergenic 50.0%
GCCTCAGGATACTACGGAAA+TGG - chr3_1:53355131-53355150 Msa0362330:intron 50.0%
CCGATGGCAACAATTGCTAG+TGG + chr3_1:53355492-53355511 None:intergenic 50.0%
CTAGCAATTGTTGCCATCGG+AGG - chr3_1:53355492-53355511 Msa0362330:intron 50.0%
TTCGTCAGTGGGTAGCTGAA+GGG - chr3_1:53355721-53355740 Msa0362330:intron 50.0%
GGAAGTTAGAGAAGCTGCCA+GGG - chr3_1:53356648-53356667 Msa0362330:intron 50.0%
!! TGTAGCTTTGGAATCCACCC+TGG + chr3_1:53356668-53356687 None:intergenic 50.0%
CAGTCGACTGTAGAGGATTC+GGG - chr3_1:53357243-53357262 Msa0362330:five_prime_UTR 50.0%
GTTAATTGACAGGTGGTGCC+TGG - chr3_1:53357471-53357490 Msa0362330:five_prime_UTR 50.0%
TTGGAACAGACATGCCGCAA+CGG + chr3_1:53357534-53357553 None:intergenic 50.0%
CTGGAACCGTCTTGAGGTTG+GGG + chr3_1:53350365-53350384 None:intergenic 55.0%
! TGCCATCTGGAACCGTCTTG+AGG + chr3_1:53350371-53350390 None:intergenic 55.0%
GAGGTTCAAATCAGTGGCGG+AGG - chr3_1:53351032-53351051 Msa0362330:CDS 55.0%
!! GAGGCTTTAAAGGGCTGAGG+AGG - chr3_1:53351051-53351070 Msa0362330:CDS 55.0%
!!! TTTTTTTTGGGGGTGGGCCG+TGG + chr3_1:53351078-53351097 None:intergenic 55.0%
AAAGGCTGGGAATGCTGGGT+GGG + chr3_1:53351164-53351183 None:intergenic 55.0%
AAAAGGCTGGGAATGCTGGG+TGG + chr3_1:53351165-53351184 None:intergenic 55.0%
GGGAAAAGGCTGGGAATGCT+GGG + chr3_1:53351168-53351187 None:intergenic 55.0%
CAGAGGAAGGGGAAAAGGCT+GGG + chr3_1:53351177-53351196 None:intergenic 55.0%
ACAGAGGAAGGGGAAAAGGC+TGG + chr3_1:53351178-53351197 None:intergenic 55.0%
GGACCAATATGAACCGGTGG+CGG + chr3_1:53351347-53351366 None:intergenic 55.0%
! GGTCCTCTTTTCCTGGGAAC+TGG - chr3_1:53352140-53352159 Msa0362330:intron 55.0%
CCTCCAGTTCCCAGGAAAAG+AGG + chr3_1:53352146-53352165 None:intergenic 55.0%
! CCTCTTTTCCTGGGAACTGG+AGG - chr3_1:53352143-53352162 Msa0362330:intron 55.0%
GGAAAGAGAAAGGGGGTTGG+GGG - chr3_1:53352770-53352789 Msa0362330:CDS 55.0%
AAAGGGGGTTGGGGGTTAAG+TGG - chr3_1:53352778-53352797 Msa0362330:CDS 55.0%
TGAGTGGTTAGGCTTCGCCA+TGG - chr3_1:53353106-53353125 Msa0362330:intron 55.0%
GAAGGAGACAACGTCCGTGA+AGG - chr3_1:53354550-53354569 Msa0362330:intron 55.0%
AGGAGACAACGTCCGTGAAG+GGG - chr3_1:53354552-53354571 Msa0362330:intron 55.0%
CTGACCCAATTCGATGGCGA+GGG + chr3_1:53354726-53354745 None:intergenic 55.0%
TCTGACCCAATTCGATGGCG+AGG + chr3_1:53354727-53354746 None:intergenic 55.0%
! CCCTCGATTGGTTCACATGG+AGG - chr3_1:53354858-53354877 Msa0362330:intron 55.0%
! TGTCGTCTCTGTGGTGGGAA+TGG - chr3_1:53354957-53354976 Msa0362330:intron 55.0%
! GTCGTCTCTGTGGTGGGAAT+GGG - chr3_1:53354958-53354977 Msa0362330:intron 55.0%
! TCTCTGTGGTGGGAATGGGA+GGG - chr3_1:53354962-53354981 Msa0362330:intron 55.0%
CTTCGTCAGTGGGTAGCTGA+AGG - chr3_1:53355720-53355739 Msa0362330:intron 55.0%
!! TCGGGCGCTGCTTGTTTTCA+CGG - chr3_1:53356034-53356053 Msa0362330:intron 55.0%
GGGAAGTTAGAGAAGCTGCC+AGG - chr3_1:53356647-53356666 Msa0362330:intron 55.0%
AGTTAGAGAAGCTGCCAGGG+TGG - chr3_1:53356651-53356670 Msa0362330:intron 55.0%
ATTGACAGGTGGTGCCTGGT+TGG - chr3_1:53357475-53357494 Msa0362330:five_prime_UTR 55.0%
GCAATCACTGGAAGCCAACC+AGG + chr3_1:53357492-53357511 None:intergenic 55.0%
!! GCGGAGGCTTTAAAGGGCTG+AGG - chr3_1:53351048-53351067 Msa0362330:CDS 60.0%
TAAAGGGCTGAGGAGGGCCA+CGG - chr3_1:53351058-53351077 Msa0362330:CDS 60.0%
GAATGCTGGGTGGGCCACTT+TGG + chr3_1:53351155-53351174 None:intergenic 60.0%
GGGGAAAAGGCTGGGAATGC+TGG + chr3_1:53351169-53351188 None:intergenic 60.0%
!! GCTCCGCCACCGGTTCATAT+TGG - chr3_1:53351341-53351360 Msa0362330:CDS 60.0%
AGAGCGCACTGTCGTCTCTG+TGG - chr3_1:53354948-53354967 Msa0362330:intron 60.0%
CGCACTGTCGTCTCTGTGGT+GGG - chr3_1:53354952-53354971 Msa0362330:intron 60.0%
! GTCTCTGTGGTGGGAATGGG+AGG - chr3_1:53354961-53354980 Msa0362330:intron 60.0%
CGAACAGATTTGCCGCCAGC+AGG + chr3_1:53357097-53357116 None:intergenic 60.0%
GCGCACTGTCGTCTCTGTGG+TGG - chr3_1:53354951-53354970 Msa0362330:intron 65.0%
! TGTGGTGGGAATGGGAGGGC+AGG - chr3_1:53354966-53354985 Msa0362330:intron 65.0%
! GTGGTGGGAATGGGAGGGCA+GGG - chr3_1:53354967-53354986 Msa0362330:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 53349522 53357909 53349522 ID=Msa0362330;Name=Msa0362330
chr3_1 mRNA 53349522 53357909 53349522 ID=Msa0362330-mRNA-1;Parent=Msa0362330;Name=Msa0362330-mRNA-1;_AED=0.19;_eAED=0.19;_QI=965|0|0.15|1|0|0|13|352|833
chr3_1 exon 53349522 53349948 53349522 ID=Msa0362330-mRNA-1:exon:9691;Parent=Msa0362330-mRNA-1
chr3_1 exon 53350320 53350515 53350320 ID=Msa0362330-mRNA-1:exon:9690;Parent=Msa0362330-mRNA-1
chr3_1 exon 53350528 53350724 53350528 ID=Msa0362330-mRNA-1:exon:9689;Parent=Msa0362330-mRNA-1
chr3_1 exon 53350737 53350967 53350737 ID=Msa0362330-mRNA-1:exon:9688;Parent=Msa0362330-mRNA-1
chr3_1 exon 53351007 53351232 53351007 ID=Msa0362330-mRNA-1:exon:9687;Parent=Msa0362330-mRNA-1
chr3_1 exon 53351248 53351488 53351248 ID=Msa0362330-mRNA-1:exon:9686;Parent=Msa0362330-mRNA-1
chr3_1 exon 53351546 53351772 53351546 ID=Msa0362330-mRNA-1:exon:9685;Parent=Msa0362330-mRNA-1
chr3_1 exon 53351875 53352095 53351875 ID=Msa0362330-mRNA-1:exon:9684;Parent=Msa0362330-mRNA-1
chr3_1 exon 53352168 53352401 53352168 ID=Msa0362330-mRNA-1:exon:9683;Parent=Msa0362330-mRNA-1
chr3_1 exon 53352420 53352647 53352420 ID=Msa0362330-mRNA-1:exon:9682;Parent=Msa0362330-mRNA-1
chr3_1 exon 53352663 53352836 53352663 ID=Msa0362330-mRNA-1:exon:9681;Parent=Msa0362330-mRNA-1
chr3_1 exon 53352846 53353068 53352846 ID=Msa0362330-mRNA-1:exon:9680;Parent=Msa0362330-mRNA-1
chr3_1 exon 53356916 53357909 53356916 ID=Msa0362330-mRNA-1:exon:9679;Parent=Msa0362330-mRNA-1
chr3_1 five_prime_UTR 53356945 53357909 53356945 ID=Msa0362330-mRNA-1:five_prime_utr;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53356916 53356944 53356916 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53352846 53353068 53352846 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53352663 53352836 53352663 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53352420 53352647 53352420 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53352168 53352401 53352168 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53351875 53352095 53351875 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53351546 53351772 53351546 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53351248 53351488 53351248 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53351007 53351232 53351007 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53350737 53350967 53350737 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53350528 53350724 53350528 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53350320 53350515 53350320 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 CDS 53349874 53349948 53349874 ID=Msa0362330-mRNA-1:cds;Parent=Msa0362330-mRNA-1
chr3_1 three_prime_UTR 53349522 53349873 53349522 ID=Msa0362330-mRNA-1:three_prime_utr;Parent=Msa0362330-mRNA-1
Gene Sequence

>Msa0362330

ATGCCATTGAATTTCAAGGAGGGAAAAAGCTGCAAAAGTGAGAGGTTGACTGCAATGGCTGAAATGGCTGTGAGTTTGGCTATTCAGCAACTGCTTCCACTGTTAAGGAAAGAAGCCAATTTGCTTAGAGGTATCCACAAGGAATTTGCATACATCAAAGATGAACTTGAAAGCATCCAAGCATTCCTTAAGGACGCCGAAAAAAGAGCTGCAGTTGAAGGAGACAACGTCCGTGAAGGGGTCAAAATATGGGTGATAGGAGTAGCTTTTCGTATAGAAGATATCATAGATGAATATATGATCTATGAACCACGAAAACCTCGTCATCCCAAATATCCAGATTCACTCCATAAGATTGCTCAATTGATCAAAACTTTGATCCCTCGCCATCGAATTGGGTCAGAGATTCGAGAAATTAAGTCATATGAAAGAAGTGAAAGATATGGCTTCCAAATCCAACCTCAAGAATCAAGTGGAATACAAAATGCTAAATGGTATGACCCTCGATTGGTTCACATGGAGGAAATTGATGTTGTGGGATTTCAAGAGTCTAGAGAAAGATTGATCGGCTGGTTGGTAAAAGGAAGTGTAGAGCGCACTGTCGTCTCTGTGGTGGGAATGGGAGGGCAGGGTAAAACCACTCTTGCCAAGAATGTTAGTGGACATTTTGATTGTCGTGTATGGATCACAGTGTCTCAATCATACAGTATAGAAGGGTTGTTGAGGGACATGTTGCGCAAGTTTCACAAGTCTTTGCCTCAGGATACTACGGAAATGGATAGAAGGTCATTAATCGATGAGGTAAGAAACTACTTGCAGCAAAAGAGGTACGTTGTTGTTTTTGATGATGTATGGAACATGCATTTTTGGAATGATATTGAATCTGCTAGATCTTCGTCTGTCAAAGTGCATGAGTTGCAACCGTTAACTGAAGAACAATCTGTGGAGTTGTTTAATAAGAAGGCATTTCGATCTGACGAATGTTGTCCAAAAGAGCTCATTGATATATCTTGTGATATTGTTAAAAAATGCAAAGGTTTACCACTAGCAATTGTTGCCATCGGAGGTCTTTTATCTTTAAGAGATAAAAATGCAATCGAGTGGAAGAGATCATGTTTGTTGTATTTTGGATTATACCCAGAAGACTATGAAATTGAGTCTAAGATACTACTTCGTCAGTGGGTAGCTGAAGGGTTTGTGAAAGAGGAAAAGGGGAAGACATTAGAAGAAGTTGCGGAAACTTATTTATCAGAGTTGATTAATAGAAGTTTGGTGCAAATCTCTACGATTAACATTGATGGAAAAGTTAAAAGTTGTCATGTTCATGATCTTTTACACAGTCAGTCATCCTTAAGTAAACAATACCGCCGTCTATCAATAGAAACAAATTCTAATGATTTAATGGCAAGTATTGAAAGCTCACATGTTCGGGCGCTGCTTGTTTTCACGGATAAAGAAATAACTGAAGACTTTGCAAATAAAATCACTACAAAATTCAAGTTGTTGAAAGTGCTTGATTTTAAAGATACATCCCTTGATTCTGTTCCTAGAAATATAGGCAATTTGATTCACTTGAAAAACACAGATATAAAAAGCCTTCCAAAATCCATTGGCATGCTCCAAAACCTAGAGACTTTGGATGTAAGAGGTACAGATATCCATGAGATGCCAAAAGAGATTAGCAAGCTTAGAAAGCTACTACATCTTCGAGGTTATACAATGTCTTTCATTAAATTGAAGGATGGTATTGGAGACATGACATCTCTACAATCATTGCGATATGTTTTATTAGATGCAGAAGATTTAAGAGAATTAGGCTTGGTTCGTCTTAGAAGAGAGCATGGAAGTGTTCTATCTTCTTTACTCAATGAGATGCAACACTTGGAGAAACTACATATTCGATCACAATCAACAAACACAAATGAAGTCAATATTGATTTACATTTGATTTCATGTCCACCAATGCTTCGAGATCTTAGACTGTATGGGAAGTTAGAGAAGCTGCCAGGGTGGATTCCAAAGCTACAAAATCTTTTGGAATTCACCCAAATAACCGATGATCCAATGGAATCACTAAAATATATGCAACACTTGCTGTCACTCTATATTGGCCACCATGGTTATGAAGGTGAAAGTTTGTATTTTCAAAATGGAGGGTTTCACAAACTAAAGGAACTAACCATTGGAAATTCATCTTCCTTGTGTTCCATCATCATTGACAAAGGATCATTAAAGCTCGAGTTATGGCGTAACACCAAACTCAAGACTGTACCTACCGGCATCCAACACTTAAAGAAGCTTCAAGTTCTCAGTATTTGGGATATGCCAAATGAATTTGTGCAAAGCATTGCTCCAAATGAAGGAAAAGAGCACTGGACCATTCAGCATGTGCCCTTTGTAGAGTTTTATCCTGCTGGCGGCAAATCTGTGGTGCCTGGTTGGCTTCCAGTGATTGCTCCAAGTGTACTTGTACAACCGTTGCGGCATGTCTGTTCCAAATGA
Protein sequence

>Msa0362330

MPLNFKEGKSCKSERLTAMAEMAVSLAIQQLLPLLRKEANLLRGIHKEFAYIKDELESIQAFLKDAEKRAAVEGDNVREGVKIWVIGVAFRIEDIIDEYMIYEPRKPRHPKYPDSLHKIAQLIKTLIPRHRIGSEIREIKSYERSERYGFQIQPQESSGIQNAKWYDPRLVHMEEIDVVGFQESRERLIGWLVKGSVERTVVSVVGMGGQGKTTLAKNVSGHFDCRVWITVSQSYSIEGLLRDMLRKFHKSLPQDTTEMDRRSLIDEVRNYLQQKRYVVVFDDVWNMHFWNDIESARSSSVKVHELQPLTEEQSVELFNKKAFRSDECCPKELIDISCDIVKKCKGLPLAIVAIGGLLSLRDKNAIEWKRSCLLYFGLYPEDYEIESKILLRQWVAEGFVKEEKGKTLEEVAETYLSELINRSLVQISTINIDGKVKSCHVHDLLHSQSSLSKQYRRLSIETNSNDLMASIESSHVRALLVFTDKEITEDFANKITTKFKLLKVLDFKDTSLDSVPRNIGNLIHLKNTDIKSLPKSIGMLQNLETLDVRGTDIHEMPKEISKLRKLLHLRGYTMSFIKLKDGIGDMTSLQSLRYVLLDAEDLRELGLVRLRREHGSVLSSLLNEMQHLEKLHIRSQSTNTNEVNIDLHLISCPPMLRDLRLYGKLEKLPGWIPKLQNLLEFTQITDDPMESLKYMQHLLSLYIGHHGYEGESLYFQNGGFHKLKELTIGNSSSLCSIIIDKGSLKLELWRNTKLKTVPTGIQHLKKLQVLSIWDMPNEFVQSIAPNEGKEHWTIQHVPFVEFYPAGGKSVVPGWLPVIAPSVLVQPLRHVCSK*