AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0371770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0371770 MtrunA17_Chr3g0118981 56.274 263 56 5 1 230 1 237 1.86e-75 252
Msa0371770 MtrunA17_Chr3g0119001 58.704 247 47 4 13 230 17 237 3.72e-75 251
Msa0371770 MtrunA17_Chr3g0102251 49.819 277 80 6 13 256 13 263 5.91e-74 230
Msa0371770 MtrunA17_Chr4g0018431 59.109 247 45 5 14 230 15 235 6.51e-74 248
Msa0371770 MtrunA17_Chr3g0102221 63.536 181 39 2 13 192 13 167 1.44e-72 223
Msa0371770 MtrunA17_Chr3g0102281 51.264 277 76 6 13 256 13 263 2.35e-69 235
Msa0371770 MtrunA17_Chr2g0298531 51.331 263 69 6 1 230 1 237 8.25e-67 228
Msa0371770 MtrunA17_Chr2g0298291 51.698 265 64 6 1 232 1 234 8.42e-66 225
Msa0371770 MtrunA17_Chr3g0102131 55.856 222 58 4 13 220 13 208 9.31e-66 225
Msa0371770 MtrunA17_Chr3g0102171 50.376 266 73 7 13 245 13 252 2.39e-65 224
Msa0371770 MtrunA17_Chr3g0102261 56.422 218 55 4 17 220 17 208 1.59e-64 221
Msa0371770 MtrunA17_Chr3g0102121 52.675 243 60 5 17 230 17 233 6.24e-64 220
Msa0371770 MtrunA17_Chr3g0102271 50.000 278 79 7 13 256 13 264 5.21e-63 217
Msa0371770 MtrunA17_Chr2g0298301 68.889 135 38 2 1 131 1 135 6.24e-57 182
Msa0371770 MtrunA17_Chr5g0415641 44.541 229 91 5 17 235 12 214 5.82e-56 183
Msa0371770 MtrunA17_Chr3g0119011 72.519 131 30 5 241 368 1 128 1.77e-52 170
Msa0371770 MtrunA17_Chr5g0415611 40.377 265 111 4 17 275 18 241 7.69e-52 173
Msa0371770 MtrunA17_Chr8g0363491 46.701 197 70 5 16 204 12 181 9.60e-52 172
Msa0371770 MtrunA17_Chr5g0415581 47.423 194 69 2 17 204 18 184 1.35e-51 172
Msa0371770 MtrunA17_Chr8g0362831 49.425 174 59 4 16 187 12 158 2.16e-51 172
Msa0371770 MtrunA17_Chr5g0415571 48.691 191 64 4 21 204 17 180 2.44e-51 170
Msa0371770 MtrunA17_Chr8g0342781 44.398 241 87 5 14 230 3 220 2.45e-51 180
Msa0371770 MtrunA17_Chr8g0362921 48.851 174 60 4 16 187 13 159 7.28e-51 170
Msa0371770 MtrunA17_Chr8g0342741 43.154 241 90 5 14 230 3 220 2.37e-50 176
Msa0371770 MtrunA17_Chr3g0119591 39.850 266 115 6 18 269 11 245 3.47e-50 173
Msa0371770 MtrunA17_Chr6g0479701 44.000 250 86 5 19 237 22 248 4.12e-50 180
Msa0371770 MtrunA17_Chr2g0300251 43.200 250 88 5 19 237 18 244 8.44e-50 179
Msa0371770 MtrunA17_Chr5g0415631 41.048 229 98 4 17 235 18 219 1.38e-49 167
Msa0371770 MtrunA17_Chr8g0362611 45.596 193 71 4 19 205 19 183 1.76e-49 168
Msa0371770 MtrunA17_Chr8g0362601 45.596 193 71 3 19 205 19 183 1.87e-49 169
Msa0371770 MtrunA17_Chr6g0479621 41.532 248 93 5 19 237 20 244 1.87e-49 178
Msa0371770 MtrunA17_Chr6g0480061 48.837 172 63 3 19 188 20 168 2.18e-49 164
Msa0371770 MtrunA17_Chr6g0480041 41.129 248 94 5 19 237 18 242 2.97e-49 178
Msa0371770 MtrunA17_Chr8g0338831 43.891 221 96 4 19 233 14 212 8.08e-49 168
Msa0371770 MtrunA17_Chr3g0081531 47.980 198 71 4 19 210 7 178 1.04e-48 176
Msa0371770 MtrunA17_Chr3g0119601 40.602 266 113 6 18 269 11 245 1.93e-48 176
Msa0371770 MtrunA17_Chr8g0342691 43.154 241 90 5 14 230 3 220 5.02e-48 174
Msa0371770 MtrunA17_Chr5g0439951 44.534 247 92 6 8 230 6 231 5.61e-48 174
Msa0371770 MtrunA17_Chr2g0296471 43.719 199 87 5 19 210 14 194 2.02e-47 160
Msa0371770 MtrunA17_Chr4g0006771 42.629 251 90 8 19 237 19 247 2.34e-47 172
Msa0371770 MtrunA17_Chr4g0005391 40.161 249 93 5 18 238 61 281 4.46e-47 171
Msa0371770 MtrunA17_Chr2g0330131 55.396 139 61 1 14 152 9 146 1.12e-46 156
Msa0371770 MtrunA17_Chr4g0041611 35.817 349 142 10 13 305 11 333 1.66e-46 170
Msa0371770 MtrunA17_Chr6g0479821 42.400 250 90 5 19 237 19 245 1.76e-46 169
Msa0371770 MtrunA17_Chr6g0454961 46.073 191 96 3 2 189 31 217 2.78e-46 169
Msa0371770 MtrunA17_Chr1g0172831 49.708 171 59 3 17 186 16 160 3.74e-46 167
Msa0371770 MtrunA17_Chr1g0172811 45.098 204 79 4 17 213 16 193 3.92e-46 169
Msa0371770 MtrunA17_Chr6g0478771 40.316 253 96 6 15 237 5 232 3.97e-46 168
Msa0371770 MtrunA17_Chr6g0455221 37.692 260 109 5 10 239 2 238 4.34e-46 169
Msa0371770 MtrunA17_Chr8g0342641 42.917 240 92 5 15 230 4 222 4.57e-46 169
Msa0371770 MtrunA17_Chr6g0455551 47.872 188 67 5 20 203 48 208 5.25e-46 168
Msa0371770 MtrunA17_Chr6g0479631 40.476 252 92 6 18 237 17 242 5.76e-46 168
Msa0371770 MtrunA17_Chr2g0299921 43.172 227 86 5 11 222 7 205 7.13e-46 168
Msa0371770 MtrunA17_Chr4g0025831 39.922 258 101 6 19 247 18 250 9.37e-46 167
Msa0371770 MtrunA17_Chr8g0342791 42.917 240 87 5 15 230 4 217 1.87e-45 167
Msa0371770 MtrunA17_Chr6g0478451 41.767 249 92 5 19 237 20 245 2.37e-45 166
Msa0371770 MtrunA17_Chr6g0479651 39.600 250 97 5 19 237 20 246 2.51e-45 166
Msa0371770 MtrunA17_Chr7g0242771 41.327 196 83 3 8 202 5 169 2.53e-45 153
Msa0371770 MtrunA17_Chr6g0479051 42.241 232 100 5 15 237 5 211 2.94e-45 166
Msa0371770 MtrunA17_Chr3g0084771 40.887 203 85 3 19 212 15 191 6.16e-45 159
Msa0371770 MtrunA17_Chr4g0005891 37.984 258 116 7 17 239 25 273 6.89e-45 165
Msa0371770 MtrunA17_Chr4g0041231 37.591 274 161 6 1 266 1 272 8.21e-45 165
Msa0371770 MtrunA17_Chr6g0454971 39.841 251 95 7 19 239 49 273 1.07e-44 164
Msa0371770 MtrunA17_Chr4g0041241 37.591 274 161 6 1 266 1 272 1.31e-44 164
Msa0371770 MtrunA17_Chr4g0025701 39.759 249 95 7 19 237 18 241 1.44e-44 162
Msa0371770 MtrunA17_Chr6g0480521 39.231 260 101 7 19 247 18 251 1.78e-44 164
Msa0371770 MtrunA17_Chr8g0348541 58.333 132 54 1 21 151 26 157 2.13e-44 164
Msa0371770 MtrunA17_Chr3g0084151 46.821 173 62 2 19 190 17 160 3.40e-44 163
Msa0371770 MtrunA17_Chr8g0382341 42.202 218 85 3 15 220 36 224 3.78e-44 155
Msa0371770 MtrunA17_Chr4g0025741 38.710 248 100 5 19 237 18 242 3.90e-44 162
Msa0371770 MtrunA17_Chr5g0443781 53.676 136 62 1 18 152 148 283 4.44e-44 154
Msa0371770 MtrunA17_Chr8g0342621 47.236 199 72 6 14 203 3 177 5.70e-44 162
Msa0371770 MtrunA17_Chr6g0481141 37.209 258 108 6 19 247 69 301 5.79e-44 162
Msa0371770 MtrunA17_Chr4g0025751 38.372 258 105 6 19 247 18 250 6.08e-44 162
Msa0371770 MtrunA17_Chr6g0479641 38.800 250 98 6 19 237 18 243 6.77e-44 162
Msa0371770 MtrunA17_Chr6g0479001 38.735 253 100 7 15 237 5 232 7.85e-44 162
Msa0371770 MtrunA17_Chr5g0420341 40.711 253 93 7 16 239 9 233 9.44e-44 162
Msa0371770 MtrunA17_Chr6g0479731 40.323 248 96 6 18 237 17 240 9.78e-44 160
Msa0371770 MtrunA17_Chr4g0041951 39.130 253 147 5 19 266 78 328 1.17e-43 161
Msa0371770 MtrunA17_Chr4g0025811 38.996 259 102 7 19 247 18 250 1.22e-43 161
Msa0371770 MtrunA17_Chr2g0299841 38.956 249 95 6 19 236 55 277 1.29e-43 161
Msa0371770 MtrunA17_Chr4g0041441 35.612 278 124 5 18 266 4 255 1.71e-43 161
Msa0371770 MtrunA17_Chr5g0414681 45.506 178 90 5 19 192 12 186 1.78e-43 149
Msa0371770 MtrunA17_Chr6g0481221 37.209 258 108 6 19 247 18 250 1.80e-43 158
Msa0371770 MtrunA17_Chr6g0480181 37.903 248 102 5 19 237 11 235 1.83e-43 160
Msa0371770 MtrunA17_Chr5g0443751 46.286 175 67 3 15 188 325 473 2.01e-43 157
Msa0371770 MtrunA17_Chr6g0478741 38.645 251 99 6 15 235 5 230 2.01e-43 160
Msa0371770 MtrunA17_Chr6g0486301 47.977 173 63 3 19 190 20 166 2.34e-43 160
Msa0371770 MtrunA17_Chr2g0299561 45.405 185 72 4 9 190 8 166 2.57e-43 160
Msa0371770 MtrunA17_Chr6g0484161 49.133 173 63 3 18 189 17 165 4.19e-43 160
Msa0371770 MtrunA17_Chr6g0480271 36.786 280 122 6 18 266 17 272 4.63e-43 159
Msa0371770 MtrunA17_Chr6g0480091 43.284 201 85 3 18 212 17 194 5.52e-43 154
Msa0371770 MtrunA17_Chr8g0342161 40.726 248 85 8 17 231 15 233 5.66e-43 153
Msa0371770 MtrunA17_Chr6g0478841 39.130 253 99 6 15 237 5 232 5.72e-43 159
Msa0371770 MtrunA17_Chr6g0486271 45.355 183 71 4 11 190 10 166 5.97e-43 158
Msa0371770 MtrunA17_Chr4g0005351 42.326 215 84 5 18 220 90 276 6.79e-43 154
Msa0371770 MtrunA17_Chr8g0372681 41.085 258 94 8 10 237 7 236 6.87e-43 159
Msa0371770 MtrunA17_Chr6g0481001 39.200 250 98 6 19 237 20 246 7.84e-43 159
Msa0371770 MtrunA17_Chr2g0299881 38.554 249 96 6 19 236 18 240 8.69e-43 159
Msa0371770 MtrunA17_Chr6g0480451 38.000 250 100 6 19 237 82 307 1.06e-42 159
Msa0371770 MtrunA17_Chr8g0342201 38.521 257 97 6 14 237 46 274 1.21e-42 157
Msa0371770 MtrunA17_Chr6g0454821 39.130 253 103 8 19 239 41 274 1.84e-42 158
Msa0371770 MtrunA17_Chr4g0005291 38.956 249 96 5 18 238 71 291 1.92e-42 158
Msa0371770 MtrunA17_Chr6g0454951 38.095 252 111 8 19 239 82 319 1.99e-42 158
Msa0371770 MtrunA17_Chr6g0455211 36.759 253 114 6 19 239 39 277 2.13e-42 158
Msa0371770 MtrunA17_Chr4g0020591 41.256 223 91 3 11 220 9 204 2.62e-42 157
Msa0371770 MtrunA17_Chr2g0299791 37.692 260 105 6 8 236 3 236 2.74e-42 157
Msa0371770 MtrunA17_Chr6g0486451 52.448 143 65 2 12 151 11 153 2.97e-42 149
Msa0371770 MtrunA17_Chr7g0243021 39.344 244 92 6 18 231 12 229 3.12e-42 150
Msa0371770 MtrunA17_Chr4g0005401 43.256 215 82 5 18 220 26 212 3.93e-42 157
Msa0371770 MtrunA17_Chr3g0084731 45.930 172 66 4 19 189 17 162 4.07e-42 157
Msa0371770 MtrunA17_Chr6g0482511 37.849 251 98 6 19 237 33 257 5.07e-42 157
Msa0371770 MtrunA17_Chr6g0482111 42.929 198 81 3 19 210 15 186 5.54e-42 157
Msa0371770 MtrunA17_Chr8g0371711 45.876 194 69 4 19 204 20 185 7.04e-42 156
Msa0371770 MtrunA17_Chr5g0430531 40.000 245 95 7 19 234 7 228 8.29e-42 151
Msa0371770 MtrunA17_Chr6g0479781 40.183 219 90 4 1 210 1 187 9.76e-42 146
Msa0371770 MtrunA17_Chr6g0480951 44.601 213 86 5 1 204 1 190 1.01e-41 148
Msa0371770 MtrunA17_Chr5g0443861 52.174 138 65 1 15 151 377 514 1.14e-41 153
Msa0371770 MtrunA17_Chr4g0005871 37.255 255 105 6 15 239 129 358 1.29e-41 155
Msa0371770 MtrunA17_Chr1g0146421 36.948 249 103 6 19 237 18 242 1.50e-41 155
Msa0371770 MtrunA17_Chr6g0480911 41.200 250 93 6 19 237 18 244 2.12e-41 155
Msa0371770 MtrunA17_Chr2g0299851 40.777 206 88 3 13 210 8 187 2.13e-41 155
Msa0371770 MtrunA17_Chr5g0443851 44.103 195 81 4 15 207 359 527 2.53e-41 152
Msa0371770 MtrunA17_Chr7g0248511 41.475 217 88 5 19 222 26 216 2.66e-41 154
Msa0371770 MtrunA17_Chr7g0256881 38.589 241 94 6 18 230 11 225 3.08e-41 154
Msa0371770 MtrunA17_Chr8g0343681 52.985 134 61 1 18 151 46 177 3.30e-41 150
Msa0371770 MtrunA17_Chr6g0479591 46.552 174 69 3 18 190 17 167 3.33e-41 154
Msa0371770 MtrunA17_Chr6g0480381 41.667 264 107 9 1 237 6 249 3.81e-41 150
Msa0371770 MtrunA17_Chr3g0084841 41.364 220 88 6 19 222 18 212 4.23e-41 154
Msa0371770 MtrunA17_Chr7g0248121 43.005 193 80 4 19 208 20 185 4.26e-41 154
Msa0371770 MtrunA17_Chr8g0350121 45.455 198 71 4 17 206 13 181 4.60e-41 149
Msa0371770 MtrunA17_Chr1g0153511 48.555 173 58 4 19 190 10 152 4.90e-41 154
Msa0371770 MtrunA17_Chr6g0455251 48.824 170 58 4 19 186 26 168 4.91e-41 154
Msa0371770 MtrunA17_Chr3g0084851 40.909 220 89 6 19 222 18 212 5.20e-41 154
Msa0371770 MtrunA17_Chr8g0339031 36.559 279 124 7 19 266 16 272 6.31e-41 154
Msa0371770 MtrunA17_Chr4g0042011 39.004 241 92 5 19 230 24 238 8.49e-41 153
Msa0371770 MtrunA17_Chr6g0480461 37.687 268 111 7 1 237 1 243 8.85e-41 153
Msa0371770 MtrunA17_Chr8g0342221 42.273 220 80 6 13 212 14 206 9.89e-41 152
Msa0371770 MtrunA17_Chr1g0172541 40.230 261 92 7 18 247 9 236 1.10e-40 153
Msa0371770 MtrunA17_Chr6g0455031 36.122 263 142 7 19 266 30 281 1.12e-40 153
Msa0371770 MtrunA17_Chr6g0455191 39.442 251 96 7 19 239 317 541 1.12e-40 153
Msa0371770 MtrunA17_Chr6g0455191 37.989 179 82 5 16 193 63 213 7.26e-27 112
Msa0371770 MtrunA17_Chr8g0343581 39.167 240 91 7 18 230 63 274 1.21e-40 152
Msa0371770 MtrunA17_Chr6g0482141 48.276 174 63 3 18 190 17 164 1.50e-40 152
Msa0371770 MtrunA17_Chr7g0248521 43.523 193 78 5 19 208 20 184 1.62e-40 152
Msa0371770 MtrunA17_Chr6g0486731 43.169 183 75 4 11 190 10 166 1.85e-40 152
Msa0371770 MtrunA17_Chr7g0242801 36.538 260 110 5 18 247 87 321 2.01e-40 152
Msa0371770 MtrunA17_Chr6g0479671 36.782 261 109 6 9 237 6 242 2.59e-40 152
Msa0371770 MtrunA17_Chr6g0455131 35.547 256 115 6 12 237 80 315 2.91e-40 152
Msa0371770 MtrunA17_Chr6g0454831 37.705 244 124 6 15 242 5 236 3.14e-40 151
Msa0371770 MtrunA17_Chr8g0368251 36.992 246 103 5 19 235 18 240 3.32e-40 151
Msa0371770 MtrunA17_Chr5g0444331 44.693 179 72 3 11 188 356 508 3.39e-40 149
Msa0371770 MtrunA17_Chr4g0005101 55.224 134 58 1 18 151 54 185 3.64e-40 151
Msa0371770 MtrunA17_Chr6g0454931 32.203 295 140 7 17 266 48 327 4.61e-40 150
Msa0371770 MtrunA17_Chr6g0478991 55.372 121 51 2 15 134 5 123 4.71e-40 138
Msa0371770 MtrunA17_Chr4g0041931 34.066 364 155 12 1 305 1 338 4.74e-40 151
Msa0371770 MtrunA17_Chr6g0454851 38.976 254 109 9 17 239 87 325 4.92e-40 151
Msa0371770 MtrunA17_Chr6g0485991 39.316 234 108 6 11 238 10 215 5.02e-40 151
Msa0371770 MtrunA17_Chr8g0343631 37.984 258 103 5 1 230 16 244 5.45e-40 150
Msa0371770 MtrunA17_Chr3g0104861 44.751 181 69 2 9 187 5 156 5.66e-40 150
Msa0371770 MtrunA17_Chr8g0342911 39.526 253 94 8 17 237 25 250 8.85e-40 150
Msa0371770 MtrunA17_Chr8g0342671 38.672 256 111 8 17 247 7 241 1.21e-39 150
Msa0371770 MtrunA17_Chr6g0451551 53.289 152 70 1 1 151 1 152 1.26e-39 150
Msa0371770 MtrunA17_Chr6g0451551 46.067 178 75 4 29 204 170 328 3.33e-35 137
Msa0371770 MtrunA17_Chr5g0420331 37.549 253 101 8 16 239 9 233 1.55e-39 149
Msa0371770 MtrunA17_Chr8g0350091 44.444 198 73 4 17 206 11 179 1.70e-39 145
Msa0371770 MtrunA17_Chr8g0370511 39.526 253 96 7 16 239 8 232 3.38e-39 148
Msa0371770 MtrunA17_Chr6g0482321 47.802 182 64 4 9 188 2 154 3.65e-39 148
Msa0371770 MtrunA17_Chr3g0084721 40.000 195 82 3 19 204 18 186 3.77e-39 148
Msa0371770 MtrunA17_Chr6g0486521 42.077 183 77 4 11 190 10 166 5.53e-39 148
Msa0371770 MtrunA17_Chr8g0352221 41.000 200 90 3 19 212 14 191 5.77e-39 148
Msa0371770 MtrunA17_Chr8g0354721 42.289 201 81 5 19 210 9 183 7.14e-39 147
Msa0371770 MtrunA17_Chr6g0482411 52.778 144 62 2 9 151 2 140 1.09e-38 135
Msa0371770 MtrunA17_Chr5g0444051 44.509 173 93 2 13 182 182 354 1.20e-38 141
Msa0371770 MtrunA17_Chr5g0444051 39.378 193 84 7 1 188 1 165 4.07e-31 121
Msa0371770 MtrunA17_Chr6g0486221 37.712 236 113 6 9 238 8 215 1.36e-38 147
Msa0371770 MtrunA17_Chr6g0464011 43.956 182 72 5 13 190 1 156 1.38e-38 140
Msa0371770 MtrunA17_Chr6g0464011 52.500 120 56 1 19 137 189 308 1.99e-34 129
Msa0371770 MtrunA17_Chr8g0342131 39.216 255 92 7 17 237 16 241 1.50e-38 146
Msa0371770 MtrunA17_Chr8g0354681 41.089 202 88 4 19 210 9 189 1.80e-38 146
Msa0371770 MtrunA17_Chr4g0005851 36.364 253 106 7 17 239 35 262 1.90e-38 146
Msa0371770 MtrunA17_Chr6g0481011 36.400 250 105 6 19 237 23 249 2.73e-38 146
Msa0371770 MtrunA17_Chr6g0486311 46.405 153 75 2 19 164 20 172 2.83e-38 146
Msa0371770 MtrunA17_Chr8g0343671 35.600 250 104 6 9 230 47 267 3.39e-38 145
Msa0371770 MtrunA17_Chr6g0486361 33.784 296 132 10 6 266 5 271 3.72e-38 145
Msa0371770 MtrunA17_Chr3g0085731 33.559 295 130 9 19 270 20 291 4.58e-38 145
Msa0371770 MtrunA17_Chr8g0350801 47.429 175 63 4 18 189 9 157 8.37e-38 144
Msa0371770 MtrunA17_Chr8g0338881 34.767 279 128 8 19 266 36 291 1.14e-37 144
Msa0371770 MtrunA17_Chr8g0338901 36.948 249 95 6 19 237 36 252 1.22e-37 144
Msa0371770 MtrunA17_Chr6g0482441 37.165 261 100 7 18 247 9 236 1.39e-37 144
Msa0371770 MtrunA17_Chr3g0085541 33.333 297 132 10 19 272 19 292 2.09e-37 142
Msa0371770 MtrunA17_Chr5g0443941 42.857 175 73 3 15 188 365 513 2.27e-37 141
Msa0371770 MtrunA17_Chr8g0351551 39.683 252 90 8 17 237 17 237 3.44e-37 142
Msa0371770 MtrunA17_Chr5g0443871 43.429 175 72 3 15 188 365 513 3.45e-37 140
Msa0371770 MtrunA17_Chr7g0242811 48.529 136 69 1 18 152 42 177 3.50e-37 142
Msa0371770 MtrunA17_Chr8g0353001 40.234 256 92 8 9 231 4 231 4.51e-37 142
Msa0371770 MtrunA17_Chr5g0443771 38.889 198 89 4 15 206 221 392 5.75e-37 137
Msa0371770 MtrunA17_Chr7g0242751 31.153 321 157 7 18 306 45 333 6.42e-37 141
Msa0371770 MtrunA17_Chr7g0223531 36.863 255 108 8 18 239 9 243 1.94e-36 140
Msa0371770 MtrunA17_Chr6g0480311 36.364 253 104 8 26 247 12 238 2.28e-36 140
Msa0371770 MtrunA17_Chr6g0482491 58.209 134 46 3 19 151 10 134 2.50e-36 140
Msa0371770 MtrunA17_Chr8g0363871 47.407 135 66 2 18 151 16 146 3.06e-36 129
Msa0371770 MtrunA17_Chr6g0486481 42.767 159 82 3 12 161 11 169 3.19e-36 140
Msa0371770 MtrunA17_Chr2g0319921 39.545 220 89 6 14 231 51 228 3.25e-36 140
Msa0371770 MtrunA17_Chr5g0442761 50.000 136 66 2 19 152 15 150 3.97e-36 139
Msa0371770 MtrunA17_Chr7g0255681 37.903 248 122 7 8 237 1005 1238 4.42e-36 139
Msa0371770 MtrunA17_Chr7g0255681 35.341 249 131 9 8 239 503 738 8.19e-32 127
Msa0371770 MtrunA17_Chr7g0255681 33.898 236 121 10 19 238 20 236 3.63e-21 95.5
Msa0371770 MtrunA17_Chr8g0354711 43.523 193 75 5 19 204 9 174 4.67e-36 139
Msa0371770 MtrunA17_Chr2g0319821 33.692 279 129 6 18 266 43 295 5.42e-36 139
Msa0371770 MtrunA17_Chr3g0077971 38.095 252 92 7 18 237 9 228 7.46e-36 139
Msa0371770 MtrunA17_Chr8g0354701 37.549 253 99 7 19 237 9 236 9.65e-36 138
Msa0371770 MtrunA17_Chr3g0118991 94.915 59 3 0 310 368 1 59 1.07e-35 124
Msa0371770 MtrunA17_Chr6g0474801 34.351 262 113 5 9 237 7 242 1.14e-35 138
Msa0371770 MtrunA17_Chr6g0481331 35.341 249 130 5 9 237 48 285 1.63e-35 138
Msa0371770 MtrunA17_Chr4g0005261 50.746 134 64 1 18 151 10 141 2.25e-35 137
Msa0371770 MtrunA17_Chr5g0443931 42.286 175 74 3 15 188 365 513 3.49e-35 135
Msa0371770 MtrunA17_Chr6g0482471 52.414 145 67 2 9 151 2 146 3.98e-35 136
Msa0371770 MtrunA17_Chr2g0319911 46.763 139 73 1 14 151 42 180 4.18e-35 127
Msa0371770 MtrunA17_Chr4g0009041 31.511 311 155 8 16 295 511 794 4.59e-35 136
Msa0371770 MtrunA17_Chr2g0302011 39.378 193 86 3 14 203 33 197 4.62e-35 134
Msa0371770 MtrunA17_Chr2g0319851 32.979 282 124 9 18 266 54 303 5.73e-35 136
Msa0371770 MtrunA17_Chr5g0394051 36.885 244 95 7 18 231 24 238 7.41e-35 132
Msa0371770 MtrunA17_Chr4g0009171 36.975 238 122 6 16 237 729 954 1.03e-34 135
Msa0371770 MtrunA17_Chr4g0009171 32.700 263 157 6 16 266 4 258 3.68e-29 119
Msa0371770 MtrunA17_Chr4g0009301 36.296 270 139 8 16 266 543 798 1.21e-34 135
Msa0371770 MtrunA17_Chr4g0009301 31.183 186 99 7 5 185 12 173 2.48e-15 77.8
Msa0371770 MtrunA17_Chr4g0009141 36.820 239 121 6 16 237 523 748 1.29e-34 135
Msa0371770 MtrunA17_Chr4g0009141 31.073 177 87 9 17 185 14 163 1.87e-12 68.9
Msa0371770 MtrunA17_Chr6g0474761 42.935 184 78 3 3 185 1 158 1.30e-34 134
Msa0371770 MtrunA17_Chr6g0482351 44.809 183 73 4 9 189 2 158 4.30e-34 134
Msa0371770 MtrunA17_Chr8g0339021 36.667 240 95 6 27 237 13 224 4.57e-34 133
Msa0371770 MtrunA17_Chr4g0010711 34.559 272 147 10 13 266 513 771 9.85e-34 132
Msa0371770 MtrunA17_Chr4g0010711 34.286 175 85 4 19 192 20 165 2.62e-21 95.9
Msa0371770 MtrunA17_Chr4g0005731 35.081 248 108 6 15 237 5 224 1.49e-33 131
Msa0371770 MtrunA17_Chr4g0009101 32.302 291 138 8 8 266 533 796 3.54e-33 131
Msa0371770 MtrunA17_Chr8g0352211 38.743 191 88 5 19 203 18 185 6.22e-33 130
Msa0371770 MtrunA17_Chr4g0009241 50.862 116 56 1 16 130 545 660 6.47e-33 130
Msa0371770 MtrunA17_Chr4g0009241 36.567 134 64 6 17 130 17 149 8.34e-13 70.1
Msa0371770 MtrunA17_Chr4g0041941 42.614 176 73 4 17 190 7 156 8.89e-33 129
Msa0371770 MtrunA17_Chr4g0005331 37.778 225 118 4 18 235 90 299 9.29e-33 129
Msa0371770 MtrunA17_Chr4g0009401 46.715 137 72 1 16 151 502 638 9.85e-33 130
Msa0371770 MtrunA17_Chr4g0010651 37.295 244 109 8 19 239 11 233 1.43e-32 129
Msa0371770 MtrunA17_Chr4g0009271 47.200 125 64 2 8 130 16 140 1.92e-32 120
Msa0371770 MtrunA17_Chr8g0338981 33.735 249 101 6 19 237 16 230 2.21e-32 129
Msa0371770 MtrunA17_Chr8g0339011 54.369 103 46 1 19 120 14 116 4.68e-32 127
Msa0371770 MtrunA17_Chr8g0353371 47.794 136 68 1 19 151 11 146 1.08e-31 126
Msa0371770 MtrunA17_Chr6g0480971 36.052 233 96 6 35 237 25 234 2.86e-31 119
Msa0371770 MtrunA17_Chr8g0343801 50.000 110 55 0 19 128 13 122 4.06e-31 124
Msa0371770 MtrunA17_Chr6g0482161 35.897 195 90 4 19 204 13 181 4.34e-31 124
Msa0371770 MtrunA17_Chr4g0010521 36.066 244 108 8 19 237 10 230 8.73e-31 124
Msa0371770 MtrunA17_Chr8g0353351 34.420 276 152 11 7 266 1 263 1.04e-29 119
Msa0371770 MtrunA17_Chr8g0353361 46.000 150 75 4 7 152 1 148 4.66e-29 117
Msa0371770 MtrunA17_Chr6g0480151 35.458 251 102 8 20 237 19 242 8.35e-29 118
Msa0371770 MtrunA17_Chr6g0455121 38.686 137 58 2 51 187 14 124 5.58e-28 107
Msa0371770 MtrunA17_Chr8g0353401 36.226 265 144 12 15 266 6 258 2.19e-27 112
Msa0371770 MtrunA17_Chr6g0454921 49.474 95 43 2 8 101 115 205 1.23e-25 102
Msa0371770 MtrunA17_Chr4g0005591 30.000 290 135 13 15 266 71 330 1.58e-25 108
Msa0371770 MtrunA17_Chr5g0443961 53.608 97 44 1 11 106 164 260 3.87e-25 103
Msa0371770 MtrunA17_Chr5g0443961 36.283 113 46 2 76 188 63 149 1.68e-15 75.9
Msa0371770 MtrunA17_Chr6g0479831 38.095 147 68 1 42 188 62 185 2.61e-23 96.7
Msa0371770 MtrunA17_Chr5g0443951 45.263 95 52 0 50 144 1 95 2.98e-21 88.2
Msa0371770 MtrunA17_Chr4g0047801 39.604 101 56 2 20 119 7 103 1.06e-16 77.0
Msa0371770 MtrunA17_Chr5g0443921 52.778 72 32 2 14 84 19 89 5.00e-16 72.8
Msa0371770 MtrunA17_Chr2g0281751 30.882 136 87 3 21 153 15 146 2.70e-14 70.1
Msa0371770 MtrunA17_Chr2g0281761 36.000 100 59 2 21 119 15 110 2.73e-14 70.5
Msa0371770 MtrunA17_Chr4g0005381 52.941 68 31 1 14 80 85 152 5.02e-14 68.9
Msa0371770 MtrunA17_Chr8g0353431 29.630 243 100 11 16 230 12 211 1.18e-12 69.3
Msa0371770 MtrunA17_Chr8g0338851 29.825 171 70 5 97 239 1 149 1.22e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0371770 AT5G36930.2 37.398 246 97 6 19 235 17 234 8.57e-41 154
Msa0371770 AT5G36930.4 37.398 246 97 6 19 235 14 231 9.06e-41 154
Msa0371770 AT5G36930.1 37.398 246 97 6 19 235 14 231 9.06e-41 154
Msa0371770 AT5G36930.3 37.398 246 97 6 19 235 14 231 1.05e-40 153
Msa0371770 AT4G14370.2 36.364 242 97 5 18 230 13 226 1.44e-36 141
Msa0371770 AT4G14370.3 36.364 242 97 5 18 230 13 226 1.44e-36 141
Msa0371770 AT2G20142.1 40.404 198 82 6 15 208 4 169 2.85e-36 134
Msa0371770 AT1G72840.2 42.045 176 74 2 17 191 13 161 3.28e-36 140
Msa0371770 AT1G72840.3 42.045 176 74 2 17 191 13 161 3.28e-36 140
Msa0371770 AT1G63880.2 36.078 255 107 5 18 244 13 239 3.53e-36 140
Msa0371770 AT1G72840.1 42.045 176 74 2 17 191 13 161 3.58e-36 140
Msa0371770 AT1G56540.1 35.484 248 103 5 18 237 14 232 5.48e-36 139
Msa0371770 AT1G63880.1 36.078 255 107 5 18 244 13 239 8.63e-36 139
Msa0371770 AT4G16950.2 40.580 207 87 3 17 216 10 187 1.33e-35 138
Msa0371770 AT4G16860.1 39.500 200 91 2 17 214 11 182 1.37e-35 138
Msa0371770 AT1G63730.1 35.227 264 110 8 15 247 7 240 1.68e-35 138
Msa0371770 AT4G16950.3 39.535 215 94 3 17 224 10 195 1.88e-35 138
Msa0371770 AT4G16950.4 39.535 215 94 3 17 224 10 195 1.91e-35 138
Msa0371770 AT4G16950.1 39.535 215 94 3 17 224 10 195 2.07e-35 138
Msa0371770 AT4G16950.5 39.535 215 94 3 17 224 10 195 2.30e-35 138
Msa0371770 AT4G16950.6 39.013 223 100 3 9 224 2 195 2.63e-35 137
Msa0371770 AT5G41750.1 35.409 257 108 6 10 237 4 231 2.68e-35 137
Msa0371770 AT5G41750.2 35.409 257 108 6 10 237 4 231 2.68e-35 137
Msa0371770 AT5G41540.1 35.743 249 104 6 17 237 9 229 3.52e-35 137
Msa0371770 AT4G16990.6 41.026 195 81 3 15 203 5 171 4.51e-35 136
Msa0371770 AT4G16990.11 41.026 195 81 3 15 203 5 171 4.51e-35 136
Msa0371770 AT4G16990.1 41.026 195 81 3 15 203 5 171 4.85e-35 136
Msa0371770 AT1G72920.1 43.827 162 81 3 15 175 5 157 5.37e-35 130
Msa0371770 AT1G27170.1 35.135 259 111 7 10 237 3 235 6.66e-35 136
Msa0371770 AT4G16990.12 41.026 195 81 3 15 203 5 171 8.04e-35 136
Msa0371770 AT4G16990.7 41.026 195 81 3 15 203 5 171 8.04e-35 136
Msa0371770 AT4G16990.13 41.026 195 81 3 15 203 5 171 9.84e-35 135
Msa0371770 AT4G16990.2 41.026 195 81 3 15 203 5 171 9.84e-35 135
Msa0371770 AT4G16990.17 41.026 195 81 3 15 203 5 171 1.02e-34 135
Msa0371770 AT4G16990.10 41.026 195 81 3 15 203 5 171 1.02e-34 135
Msa0371770 AT5G48770.1 37.449 243 90 8 19 230 14 225 1.05e-34 135
Msa0371770 AT5G46450.1 35.981 214 106 3 19 229 13 198 1.14e-34 135
Msa0371770 AT5G46450.2 35.981 214 106 3 19 229 13 198 1.19e-34 135
Msa0371770 AT4G16990.8 41.361 191 78 3 19 203 76 238 1.21e-34 135
Msa0371770 AT5G46450.3 35.514 214 107 3 19 229 13 198 1.24e-34 135
Msa0371770 AT1G63860.2 38.866 247 94 6 18 236 13 230 1.30e-34 135
Msa0371770 AT1G63860.4 38.866 247 94 6 18 236 13 230 1.45e-34 135
Msa0371770 AT1G63860.5 38.866 247 94 6 18 236 13 230 1.45e-34 135
Msa0371770 AT1G63860.3 38.866 247 94 6 18 236 13 230 1.45e-34 135
Msa0371770 AT1G63860.1 38.866 247 94 6 18 236 13 230 1.54e-34 135
Msa0371770 AT4G11170.1 35.458 251 116 7 18 245 10 237 1.55e-34 135
Msa0371770 AT1G63740.2 35.341 249 103 7 18 237 41 260 1.56e-34 135
Msa0371770 AT1G72900.1 40.722 194 74 5 19 210 10 164 1.66e-34 130
Msa0371770 AT1G63860.6 38.866 247 94 6 18 236 13 230 1.74e-34 135
Msa0371770 AT4G19500.1 36.929 241 97 5 17 230 9 221 2.05e-34 135
Msa0371770 AT5G58120.1 34.363 259 111 7 18 247 14 242 2.73e-34 134
Msa0371770 AT1G64070.1 35.484 248 103 6 18 237 13 231 4.34e-34 134
Msa0371770 AT4G16960.1 39.109 202 91 3 17 214 11 184 4.39e-34 134
Msa0371770 AT5G22690.4 36.279 215 105 4 19 229 10 196 6.04e-34 133
Msa0371770 AT5G22690.1 36.279 215 105 4 19 229 10 196 6.23e-34 133
Msa0371770 AT5G22690.2 36.279 215 105 4 19 229 10 196 6.79e-34 133
Msa0371770 AT5G22690.3 36.279 215 105 4 19 229 10 196 7.42e-34 133
Msa0371770 AT5G17680.2 35.341 249 98 6 18 237 17 231 7.52e-34 133
Msa0371770 AT1G72910.1 46.763 139 71 2 15 152 5 141 8.27e-34 129
Msa0371770 AT4G08450.1 34.000 250 104 6 19 239 11 228 9.21e-34 133
Msa0371770 AT5G51630.1 38.589 241 91 6 19 230 11 223 9.37e-34 133
Msa0371770 AT4G08450.2 34.000 250 104 6 19 239 11 228 1.01e-33 133
Msa0371770 AT5G51630.3 41.146 192 83 3 19 208 11 174 1.11e-33 133
Msa0371770 AT3G04220.2 28.488 344 162 8 17 304 61 376 1.51e-33 132
Msa0371770 AT4G16890.1 42.197 173 71 2 17 189 19 162 1.70e-33 132
Msa0371770 AT1G72930.2 45.588 136 71 2 18 152 8 141 1.71e-33 122
Msa0371770 AT4G16890.5 42.197 173 71 2 17 189 10 153 1.75e-33 132
Msa0371770 AT1G72890.1 48.921 139 68 2 15 152 35 171 1.80e-33 129
Msa0371770 AT5G41550.1 35.685 241 151 2 17 255 11 249 1.88e-33 132
Msa0371770 AT4G16890.3 42.197 173 71 2 17 189 10 153 2.03e-33 132
Msa0371770 AT1G72930.1 44.286 140 75 2 15 153 5 142 2.28e-33 122
Msa0371770 AT1G72940.1 46.043 139 73 2 15 152 5 142 2.29e-33 127
Msa0371770 AT1G66090.1 31.802 283 131 5 18 266 25 279 2.47e-33 129
Msa0371770 AT4G16890.2 42.197 173 71 2 17 189 19 162 2.66e-33 132
Msa0371770 AT1G72860.1 39.378 193 80 4 18 203 11 173 2.70e-33 132
Msa0371770 AT1G72860.3 39.378 193 80 4 18 203 11 173 2.83e-33 131
Msa0371770 AT5G38850.1 36.290 248 97 8 18 237 8 222 3.24e-33 131
Msa0371770 AT3G04220.3 28.488 344 162 8 17 304 61 376 3.48e-33 131
Msa0371770 AT3G04220.1 28.488 344 162 8 17 304 61 376 3.82e-33 131
Msa0371770 AT1G72860.2 39.378 193 80 4 18 203 11 173 3.92e-33 131
Msa0371770 AT4G16920.4 40.404 198 86 4 20 214 10 178 5.21e-33 131
Msa0371770 AT4G16920.7 40.404 198 86 4 20 214 10 178 5.21e-33 131
Msa0371770 AT5G17680.1 35.081 248 99 6 18 237 17 230 5.33e-33 130
Msa0371770 AT4G16920.1 40.404 198 86 4 20 214 10 178 5.87e-33 130
Msa0371770 AT5G49140.1 38.272 243 88 8 18 230 14 224 6.02e-33 130
Msa0371770 AT4G16920.6 40.404 198 86 4 20 214 10 178 6.06e-33 130
Msa0371770 AT4G16920.9 40.404 198 86 4 20 214 10 178 6.21e-33 130
Msa0371770 AT4G16920.3 40.404 198 86 4 20 214 10 178 7.04e-33 130
Msa0371770 AT4G16920.5 40.404 198 86 4 20 214 10 178 7.04e-33 130
Msa0371770 AT4G16920.2 40.404 198 86 4 20 214 10 178 7.74e-33 130
Msa0371770 AT4G16920.8 40.404 198 86 4 20 214 10 178 7.74e-33 130
Msa0371770 AT1G56510.1 34.921 252 105 6 15 236 7 229 8.54e-33 130
Msa0371770 AT1G27180.5 34.836 244 141 6 10 237 3 244 9.12e-33 130
Msa0371770 AT1G27180.8 34.836 244 141 6 10 237 3 244 9.12e-33 130
Msa0371770 AT1G72890.2 48.921 139 68 2 15 152 35 171 9.50e-33 128
Msa0371770 AT1G27180.1 34.836 244 141 6 10 237 167 408 1.14e-32 130
Msa0371770 AT1G27180.1 35.065 154 84 6 7 152 2 147 1.33e-18 88.2
Msa0371770 AT1G17600.1 37.374 198 91 5 18 212 11 178 1.16e-32 130
Msa0371770 AT1G69550.1 30.249 281 134 6 19 265 80 332 1.38e-32 129
Msa0371770 AT5G46510.2 33.725 255 111 7 19 244 9 234 1.82e-32 129
Msa0371770 AT5G46510.1 33.725 255 111 7 19 244 9 234 2.32e-32 129
Msa0371770 AT1G63870.1 31.818 286 138 5 10 266 8 265 2.47e-32 129
Msa0371770 AT1G65850.1 37.791 172 79 2 19 190 33 176 2.67e-32 129
Msa0371770 AT1G65850.2 37.791 172 79 2 19 190 48 191 3.27e-32 128
Msa0371770 AT2G16870.1 34.241 257 112 6 19 247 12 239 3.30e-32 128
Msa0371770 AT5G40910.1 34.866 261 114 6 17 249 10 242 3.43e-32 128
Msa0371770 AT5G40910.9 34.866 261 114 6 17 249 10 242 3.43e-32 128
Msa0371770 AT5G44510.3 33.871 248 106 6 19 237 40 258 5.42e-32 128
Msa0371770 AT5G18370.1 40.116 172 73 4 19 189 61 203 5.65e-32 128
Msa0371770 AT5G44510.2 33.871 248 106 6 19 237 40 258 6.26e-32 127
Msa0371770 AT5G44510.4 33.871 248 106 6 19 237 40 258 6.32e-32 127
Msa0371770 AT5G44510.1 33.871 248 106 6 19 237 40 258 6.34e-32 127
Msa0371770 AT1G72950.1 43.396 159 79 3 18 175 10 158 7.09e-32 124
Msa0371770 AT5G46260.1 35.622 233 119 6 19 237 12 227 1.17e-31 127
Msa0371770 AT5G46490.1 34.934 229 126 6 19 237 12 227 1.26e-31 122
Msa0371770 AT1G17615.1 44.604 139 74 2 15 152 11 147 1.27e-31 123
Msa0371770 AT5G46470.1 34.583 240 101 5 19 230 14 225 1.55e-31 126
Msa0371770 AT3G04210.2 29.446 343 159 10 17 304 64 378 1.99e-31 125
Msa0371770 AT3G04210.1 29.446 343 159 10 17 304 64 378 1.99e-31 125
Msa0371770 AT1G31540.3 35.833 240 96 7 19 230 12 221 2.01e-31 126
Msa0371770 AT1G31540.1 35.833 240 96 7 19 230 12 221 2.01e-31 126
Msa0371770 AT1G31540.2 35.417 240 97 7 19 230 12 221 2.37e-31 126
Msa0371770 AT4G09430.1 39.572 187 78 4 9 191 2 157 3.70e-31 124
Msa0371770 AT5G46270.3 33.858 254 109 7 19 244 12 234 7.67e-31 124
Msa0371770 AT5G46270.2 33.858 254 109 7 19 244 12 234 7.82e-31 124
Msa0371770 AT5G46270.1 33.858 254 109 7 19 244 23 245 8.53e-31 124
Msa0371770 AT5G46270.5 33.858 254 109 7 19 244 23 245 8.53e-31 124
Msa0371770 AT5G46270.4 33.858 254 109 7 19 244 23 245 9.04e-31 124
Msa0371770 AT5G46490.7 34.934 229 126 6 19 237 52 267 1.02e-30 123
Msa0371770 AT5G46490.5 34.934 229 126 6 19 237 52 267 1.02e-30 123
Msa0371770 AT5G38344.1 38.217 157 91 2 17 173 58 208 1.07e-30 116
Msa0371770 AT5G46490.3 34.934 229 126 6 19 237 69 284 1.25e-30 123
Msa0371770 AT5G46490.4 34.934 229 126 6 19 237 69 284 1.46e-30 123
Msa0371770 AT4G16990.9 40.217 184 76 3 26 203 16 171 1.53e-30 123
Msa0371770 AT5G46490.6 34.934 229 126 6 19 237 52 267 1.54e-30 123
Msa0371770 AT5G46490.8 34.934 229 126 6 19 237 12 227 1.69e-30 122
Msa0371770 AT4G16900.1 37.113 194 92 2 17 208 10 175 1.77e-30 123
Msa0371770 AT1G56520.1 33.603 247 106 5 15 231 7 225 1.79e-30 123
Msa0371770 AT5G46490.2 34.934 229 126 6 19 237 12 227 1.87e-30 123
Msa0371770 AT4G16900.3 37.113 194 92 2 17 208 10 175 1.98e-30 123
Msa0371770 AT1G56520.5 33.603 247 106 5 15 231 7 225 2.09e-30 122
Msa0371770 AT1G56520.4 33.603 247 106 5 15 231 7 225 2.35e-30 123
Msa0371770 AT4G16900.2 37.113 194 92 2 17 208 10 175 2.36e-30 123
Msa0371770 AT1G56520.2 33.603 247 106 5 15 231 7 225 2.98e-30 122
Msa0371770 AT5G18360.1 34.109 258 107 8 18 245 15 239 5.28e-30 122
Msa0371770 AT4G04110.1 34.574 188 94 2 21 207 45 204 1.00e-29 115
Msa0371770 AT5G38340.3 32.567 261 113 7 17 245 55 284 1.16e-29 121
Msa0371770 AT5G38340.1 32.567 261 113 7 17 245 55 284 1.16e-29 121
Msa0371770 AT5G46520.1 44.030 134 70 2 19 152 12 140 2.63e-29 120
Msa0371770 AT5G46520.2 44.030 134 70 2 19 152 50 178 2.74e-29 120
Msa0371770 AT5G40100.1 48.507 134 65 3 19 151 12 142 2.76e-29 120
Msa0371770 AT3G44630.2 31.250 256 119 6 18 244 93 320 2.98e-29 120
Msa0371770 AT3G44630.1 31.250 256 119 6 18 244 93 320 2.98e-29 120
Msa0371770 AT3G44630.4 31.250 256 119 6 18 244 93 320 2.98e-29 120
Msa0371770 AT3G44480.2 31.250 256 119 6 18 244 97 324 3.38e-29 119
Msa0371770 AT3G44630.3 31.250 256 119 6 18 244 93 320 3.62e-29 119
Msa0371770 AT3G44480.4 31.250 256 119 6 18 244 97 324 3.82e-29 119
Msa0371770 AT3G44480.1 31.250 256 119 6 18 244 97 324 3.82e-29 119
Msa0371770 AT5G18350.1 36.316 190 90 3 3 189 1 162 4.80e-29 119
Msa0371770 AT3G44480.3 31.250 256 119 6 18 244 97 324 5.02e-29 119
Msa0371770 AT3G44480.5 31.250 256 119 6 18 244 97 324 5.02e-29 119
Msa0371770 AT2G14080.1 32.171 258 118 5 17 245 54 283 1.18e-28 118
Msa0371770 AT1G63750.3 37.629 194 87 3 18 205 17 182 1.86e-28 117
Msa0371770 AT4G14370.1 35.545 211 79 5 49 230 1 183 7.40e-28 115
Msa0371770 AT5G17970.1 42.446 139 68 2 19 152 16 147 1.06e-27 115
Msa0371770 AT3G44670.1 30.859 256 120 5 18 244 93 320 1.18e-27 115
Msa0371770 AT3G44670.2 30.859 256 120 5 18 244 93 320 1.18e-27 115
Msa0371770 AT4G12010.1 46.043 139 71 4 15 151 7 143 1.27e-27 115
Msa0371770 AT3G44400.2 28.623 276 141 8 18 266 47 293 2.17e-27 114
Msa0371770 AT3G44400.1 28.623 276 141 8 18 266 47 293 2.17e-27 114
Msa0371770 AT3G44400.4 28.623 276 141 8 18 266 47 293 2.17e-27 114
Msa0371770 AT3G44400.5 28.623 276 141 8 18 266 47 293 2.17e-27 114
Msa0371770 AT3G44400.3 28.623 276 141 8 18 266 47 293 2.17e-27 114
Msa0371770 AT5G11250.2 28.114 281 140 5 19 265 62 314 4.37e-27 113
Msa0371770 AT1G63740.1 34.862 218 84 7 49 237 1 189 6.73e-27 112
Msa0371770 AT4G19530.1 42.336 137 74 3 16 152 12 143 9.33e-27 112
Msa0371770 AT4G19530.2 42.336 137 74 3 16 152 12 143 9.38e-27 112
Msa0371770 AT5G20935.1 63.415 82 27 2 287 366 37 117 6.40e-26 101
Msa0371770 AT4G19510.2 48.739 119 60 1 12 130 10 127 8.12e-26 109
Msa0371770 AT5G45220.2 39.568 139 83 1 14 152 326 463 8.27e-26 108
Msa0371770 AT5G45220.2 36.424 151 82 4 4 151 1 140 3.66e-18 86.3
Msa0371770 AT1G27170.2 29.600 250 117 6 18 237 15 235 8.42e-26 109
Msa0371770 AT4G19510.3 48.739 119 60 1 12 130 50 167 1.02e-25 109
Msa0371770 AT5G45220.1 39.855 138 82 1 14 151 326 462 1.05e-25 108
Msa0371770 AT5G45220.1 36.424 151 82 4 4 151 1 140 3.54e-18 86.3
Msa0371770 AT4G19510.5 48.739 119 60 1 12 130 50 167 1.05e-25 109
Msa0371770 AT4G19510.4 48.739 119 60 1 12 130 50 167 1.05e-25 109
Msa0371770 AT4G19510.7 48.739 119 60 1 12 130 50 167 1.05e-25 109
Msa0371770 AT4G19510.8 48.739 119 60 1 12 130 50 167 1.05e-25 109
Msa0371770 AT4G19510.1 48.739 119 60 1 12 130 50 167 1.05e-25 109
Msa0371770 AT4G19510.10 48.739 119 60 1 12 130 10 127 1.10e-25 109
Msa0371770 AT4G19510.6 48.739 119 60 1 12 130 50 167 1.11e-25 109
Msa0371770 AT4G19510.9 48.739 119 60 1 12 130 50 167 1.14e-25 109
Msa0371770 AT1G57630.1 42.647 136 73 3 19 153 22 153 2.88e-25 100
Msa0371770 AT5G41740.1 31.034 261 150 8 17 266 14 255 4.21e-25 107
Msa0371770 AT5G41740.2 31.034 261 150 8 17 266 14 255 4.59e-25 107
Msa0371770 AT5G45080.1 42.361 144 81 2 9 151 4 146 1.01e-24 104
Msa0371770 AT5G44900.1 40.876 137 78 2 16 151 15 149 1.32e-24 101
Msa0371770 AT5G44870.1 41.958 143 79 2 9 151 2 140 1.60e-24 105
Msa0371770 AT1G57670.1 40.523 153 87 3 21 172 11 160 3.73e-24 102
Msa0371770 AT5G48780.1 40.146 137 78 2 17 152 10 143 5.66e-24 103
Msa0371770 AT5G48780.2 40.146 137 78 2 17 152 10 143 5.73e-24 103
Msa0371770 AT1G47370.1 38.462 143 80 3 14 151 4 143 6.13e-24 101
Msa0371770 AT4G16940.1 39.873 158 63 3 61 214 11 140 7.23e-24 103
Msa0371770 AT4G16940.4 39.873 158 63 3 61 214 11 140 7.25e-24 103
Msa0371770 AT4G16940.6 39.873 158 63 3 61 214 11 140 7.74e-24 103
Msa0371770 AT4G16940.2 39.873 158 63 3 61 214 11 140 7.76e-24 103
Msa0371770 AT4G16940.3 39.873 158 63 3 61 214 11 140 7.76e-24 103
Msa0371770 AT4G16940.5 39.873 158 63 3 61 214 11 140 7.76e-24 103
Msa0371770 AT1G09665.1 37.956 137 82 2 15 151 6 139 9.92e-24 96.7
Msa0371770 AT1G57830.1 36.095 169 99 4 1 169 6 165 1.06e-23 96.7
Msa0371770 AT2G32140.1 42.105 133 74 2 21 152 23 153 1.21e-23 100
Msa0371770 AT3G51570.2 38.406 138 81 3 16 153 16 149 1.55e-23 103
Msa0371770 AT3G51570.1 38.406 138 81 3 16 153 16 149 1.56e-23 103
Msa0371770 AT5G45070.1 37.063 143 89 1 9 151 4 145 1.71e-23 100
Msa0371770 AT4G19520.1 41.447 152 77 5 20 168 1402 1544 6.19e-23 101
Msa0371770 AT4G19520.1 28.049 246 116 7 20 239 6 216 5.25e-17 83.6
Msa0371770 AT4G19520.2 41.447 152 77 5 20 168 1402 1544 6.61e-23 101
Msa0371770 AT4G19520.2 28.862 246 114 8 20 239 6 216 6.25e-17 83.2
Msa0371770 AT4G19520.4 41.447 152 77 5 20 168 1402 1544 6.61e-23 101
Msa0371770 AT4G19520.4 28.862 246 114 8 20 239 6 216 6.25e-17 83.2
Msa0371770 AT4G19520.3 38.690 168 67 5 20 185 1402 1535 1.13e-22 100
Msa0371770 AT4G19520.3 28.862 246 114 8 20 239 6 216 5.63e-17 83.2
Msa0371770 AT4G19520.5 38.690 168 67 5 20 185 1402 1535 1.19e-22 100
Msa0371770 AT4G19520.5 28.862 246 114 8 20 239 6 216 5.43e-17 83.2
Msa0371770 AT4G19920.1 45.217 115 62 1 21 135 52 165 4.34e-22 95.1
Msa0371770 AT5G45000.1 38.235 136 83 1 16 151 12 146 4.84e-22 97.1
Msa0371770 AT5G45000.1 34.074 135 89 0 17 151 213 347 5.27e-14 73.2
Msa0371770 AT1G51270.13 35.461 141 88 3 14 153 182 320 5.24e-22 96.3
Msa0371770 AT1G51270.12 35.461 141 88 3 14 153 182 320 5.24e-22 96.3
Msa0371770 AT1G51270.14 35.461 141 88 3 14 153 182 320 5.24e-22 96.3
Msa0371770 AT1G51270.11 35.461 141 88 3 14 153 182 320 5.24e-22 96.3
Msa0371770 AT2G03300.1 38.168 131 78 2 21 151 9 136 6.65e-22 92.8
Msa0371770 AT1G51270.5 35.714 140 87 3 14 152 183 320 6.83e-22 95.9
Msa0371770 AT1G57850.3 39.259 135 75 5 19 151 12 141 1.27e-21 90.9
Msa0371770 AT5G45200.3 40.136 147 80 4 9 151 5 147 1.31e-21 97.1
Msa0371770 AT5G45060.2 40.000 145 79 4 9 151 4 142 1.36e-21 97.1
Msa0371770 AT5G45060.1 40.000 145 79 4 9 151 4 142 1.36e-21 97.1
Msa0371770 AT5G45200.1 40.136 147 80 4 9 151 5 147 1.63e-21 97.1
Msa0371770 AT1G51270.8 36.765 136 83 3 18 152 357 490 2.13e-21 95.9
Msa0371770 AT1G51270.2 36.765 136 83 3 18 152 357 490 2.13e-21 95.9
Msa0371770 AT1G57850.1 39.259 135 75 5 19 151 12 141 2.42e-21 90.9
Msa0371770 AT4G36150.1 38.571 140 83 2 12 151 12 148 3.14e-21 96.3
Msa0371770 AT5G45250.1 38.926 149 81 5 7 151 1 143 3.37e-21 95.9
Msa0371770 AT1G60320.1 40.411 146 83 3 7 151 11 153 3.92e-21 89.7
Msa0371770 AT1G51270.4 35.461 141 88 3 14 153 113 251 3.99e-21 94.4
Msa0371770 AT1G51270.1 35.714 140 87 3 14 152 353 490 4.27e-21 95.1
Msa0371770 AT1G51270.15 35.461 141 88 3 14 153 182 320 5.32e-21 94.4
Msa0371770 AT1G51270.9 36.496 137 84 3 18 153 309 443 6.33e-21 94.7
Msa0371770 AT1G51270.6 36.496 137 84 3 18 153 309 443 6.33e-21 94.7
Msa0371770 AT1G51270.7 36.496 137 84 3 18 153 309 443 6.33e-21 94.7
Msa0371770 AT1G51270.10 36.496 137 84 3 18 153 309 443 6.33e-21 94.7
Msa0371770 AT1G51270.3 36.496 137 84 3 18 153 357 491 6.79e-21 94.7
Msa0371770 AT1G65390.2 39.706 136 81 1 16 151 19 153 6.90e-21 91.3
Msa0371770 AT1G27180.2 29.644 253 148 9 7 237 2 246 7.71e-21 95.1
Msa0371770 AT1G27180.3 29.644 253 148 9 7 237 2 246 8.99e-21 94.7
Msa0371770 AT4G11340.1 30.500 200 115 6 15 207 220 402 1.10e-20 93.6
Msa0371770 AT2G03030.1 38.931 131 77 2 21 151 9 136 1.12e-20 89.4
Msa0371770 AT1G65390.3 39.706 136 81 1 16 151 19 153 1.20e-20 91.3
Msa0371770 AT4G36140.1 29.044 272 148 6 18 244 49 320 1.54e-20 94.0
Msa0371770 AT4G36140.1 30.366 191 69 7 63 230 470 619 3.84e-12 68.6
Msa0371770 AT1G65390.1 39.706 136 81 1 16 151 19 153 4.12e-20 91.3
Msa0371770 AT5G17880.2 39.416 137 80 2 21 157 19 152 5.79e-20 92.4
Msa0371770 AT5G17880.1 39.416 137 80 2 21 157 19 152 6.31e-20 92.0
Msa0371770 AT5G11250.3 26.877 253 123 5 47 265 8 232 1.27e-19 91.3
Msa0371770 AT5G11250.1 26.877 253 123 5 47 265 8 232 1.27e-19 91.3
Msa0371770 AT5G51630.5 37.838 185 58 6 75 230 3 159 2.57e-19 90.1
Msa0371770 AT5G51630.2 37.838 185 58 6 75 230 3 159 3.15e-19 90.1
Msa0371770 AT5G51630.4 37.838 185 58 6 75 230 3 159 3.92e-19 89.7
Msa0371770 AT5G51630.6 37.838 185 58 6 75 230 3 159 3.92e-19 89.7
Msa0371770 AT2G17060.2 37.857 140 78 3 21 157 20 153 6.51e-19 89.0
Msa0371770 AT2G17060.1 38.806 134 73 3 21 151 20 147 7.92e-19 89.0
Msa0371770 AT1G72870.1 39.416 137 75 4 18 151 9 140 1.09e-18 87.8
Msa0371770 AT5G45210.1 30.233 258 120 10 13 245 1 223 1.71e-18 87.4
Msa0371770 AT5G45210.5 30.233 258 120 10 13 245 20 242 1.77e-18 87.4
Msa0371770 AT5G45210.4 30.233 258 120 10 13 245 29 251 1.88e-18 87.4
Msa0371770 AT5G45210.3 29.961 257 122 10 13 245 29 251 2.26e-18 87.0
Msa0371770 AT5G45210.2 30.233 258 120 10 13 245 29 251 2.74e-18 87.0
Msa0371770 AT1G52900.1 35.971 139 79 4 19 156 38 167 1.61e-17 80.5
Msa0371770 AT4G23510.3 29.500 200 116 8 17 210 8 188 4.34e-17 83.2
Msa0371770 AT4G23510.1 29.500 200 116 8 17 210 8 188 4.52e-17 83.2
Msa0371770 AT4G23510.2 29.500 200 116 8 17 210 8 188 4.74e-17 83.2
Msa0371770 AT4G23515.2 31.373 204 119 7 21 221 11 196 1.03e-16 80.1
Msa0371770 AT4G23515.1 31.527 203 118 7 21 220 11 195 1.57e-16 80.1
Msa0371770 AT5G45230.1 27.203 261 143 9 7 248 2 234 2.13e-16 81.6
Msa0371770 AT5G44920.1 30.000 200 114 3 13 204 5 186 1.06e-15 76.6
Msa0371770 AT5G44920.2 37.600 125 77 1 13 137 5 128 2.27e-15 75.5
Msa0371770 AT5G44910.1 36.090 133 82 2 21 152 13 143 5.39e-15 74.3
Msa0371770 AT1G61105.1 33.929 112 69 2 9 119 19 126 6.07e-15 73.2
Msa0371770 AT4G19925.1 34.483 116 70 1 21 130 14 129 7.55e-14 71.2
Msa0371770 AT1G57850.2 39.216 102 55 5 52 151 32 128 1.55e-13 67.8
Msa0371770 AT4G09420.1 28.959 221 122 6 18 237 11 197 2.32e-13 71.6
Msa0371770 AT1G72850.1 30.508 177 80 4 15 189 3 138 3.57e-13 70.9
Msa0371770 AT4G19910.1 34.821 112 72 1 21 132 9 119 4.30e-13 68.9
Msa0371770 AT3G51560.1 29.630 243 102 10 20 237 6 204 4.52e-13 71.2
Msa0371770 AT4G36140.2 30.366 191 69 7 63 230 285 434 2.75e-12 68.9
Msa0371770 AT2G17050.3 36.752 117 72 2 17 132 1154 1269 1.31e-11 66.6
Msa0371770 AT2G17050.2 36.752 117 72 2 17 132 1154 1269 1.45e-11 66.6
Msa0371770 AT2G17050.1 36.752 117 72 2 17 132 1123 1238 1.59e-11 66.6

Find 57 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTGTTGAACTTTGATTT+TGG 0.183450 3_1:+70006653 None:intergenic
CAAGAAGGTTATAACATTTA+TGG 0.184412 3_1:-70007514 Msa0371770:CDS
ACGTTTGTACAAGCCAAAAT+TGG 0.210526 3_1:+70006464 None:intergenic
GATTCCAGCTTGGGAGTTTC+GGG 0.222633 3_1:-70007284 Msa0371770:CDS
TCATGATCTGATGAGTCTTT+TGG 0.253488 3_1:+70006591 None:intergenic
TGGAGCTTCAATGATAATAA+TGG 0.263065 3_1:+70006524 None:intergenic
AGATTCCAGCTTGGGAGTTT+CGG 0.263405 3_1:-70007285 Msa0371770:CDS
AGCAAAGCAACTGAAATATT+TGG 0.275483 3_1:+70006627 None:intergenic
GCTATACTCAGCCATATCTA+AGG 0.306717 3_1:+70006127 None:intergenic
AAACGTTCAAAGTTGGATAA+AGG 0.314200 3_1:-70006552 Msa0371770:CDS
TCGGTTTATTGCCCCAATTT+TGG 0.319384 3_1:-70006477 Msa0371770:CDS
AAATGGAAAGATGCTCTAAC+TGG 0.334983 3_1:-70007207 Msa0371770:CDS
AAGACTACGCTTCTTCAAAA+TGG 0.347960 3_1:-70007401 Msa0371770:CDS
ATTGGAACTTATATTATTGA+TGG 0.349289 3_1:-70006164 Msa0371770:CDS
GACGACAGTGATCTTGAAAA+AGG 0.350587 3_1:-70007492 Msa0371770:CDS
GGTCAAAACTGCAGCTAATT+CGG 0.362866 3_1:-70006496 Msa0371770:CDS
TTGGTGTCGACCTTCAAATA+TGG 0.367295 3_1:+70006672 None:intergenic
CGTTTGTACAAGCCAAAATT+GGG 0.376043 3_1:+70006465 None:intergenic
GGAGCTTCAATGATAATAAT+GGG 0.378832 3_1:+70006525 None:intergenic
ATATTTCAAGCCCTTAGATA+TGG 0.400345 3_1:-70006138 Msa0371770:CDS
GTAGAAGCAACTTGCACAAA+TGG 0.413125 3_1:-70007224 Msa0371770:CDS
AGCAGCCAACTTAGCTGGTT+GGG 0.419068 3_1:-70007106 Msa0371770:CDS
GTTGGGACTATCGAAATTGC+AGG 0.424839 3_1:-70007089 Msa0371770:CDS
GGATTTATTCCGTAGAAAAC+AGG 0.426179 3_1:+70007318 None:intergenic
AACGTTCAAAGTTGGATAAA+GGG 0.431347 3_1:-70006551 Msa0371770:CDS
TTTGAAGCAGCCAACTTAGC+TGG 0.455819 3_1:-70007111 Msa0371770:CDS
AGCTGGAATCTCACATCTGA+TGG 0.458549 3_1:+70007297 None:intergenic
TACCACCAAGCCATATTTGA+AGG 0.463739 3_1:-70006682 Msa0371770:CDS
TGGGCAGTGCGGCGCAGCAT+TGG 0.466372 3_1:-70006182 Msa0371770:CDS
CAGATGTGAGATTCCAGCTT+GGG 0.486354 3_1:-70007293 Msa0371770:CDS
TCGTCACTGAAGGGCGGCAT+AGG 0.493892 3_1:-70006774 Msa0371770:CDS
ATAGTCCCAACCAGCTAAGT+TGG 0.498583 3_1:+70007101 None:intergenic
TATCATTGAAGCTCCAAAGA+TGG 0.502814 3_1:-70006517 Msa0371770:CDS
CTTGGTGGTAGAGCAAGAAA+TGG 0.514075 3_1:+70006695 None:intergenic
AAGCAGCCAACTTAGCTGGT+TGG 0.522519 3_1:-70007107 Msa0371770:CDS
CTTCCCCGAAACTCCCAAGC+TGG 0.523640 3_1:+70007280 None:intergenic
TGTTGAAGCTTCTTCTATTG+TGG 0.529656 3_1:-70007625 Msa0371770:CDS
TGCTCAGAGCATCGTAGAGA+TGG 0.542149 3_1:+70007535 None:intergenic
GACCTTCAAATATGGCTTGG+TGG 0.555798 3_1:+70006680 None:intergenic
ATATTTCAGTTGCTTTGCTG+AGG 0.568408 3_1:-70006623 Msa0371770:CDS
TGAAGAGAAATCGTCACTGA+AGG 0.571836 3_1:-70006784 Msa0371770:CDS
CTATACTCAGCCATATCTAA+GGG 0.575354 3_1:+70006128 None:intergenic
GTCGACCTTCAAATATGGCT+TGG 0.586091 3_1:+70006677 None:intergenic
GACACTCGCAGAAACTTCAC+AGG 0.587883 3_1:-70007558 Msa0371770:CDS
CTACGATGCTCTGAGCAAGA+AGG 0.590455 3_1:-70007529 Msa0371770:CDS
ATCACTAATCAAAGCCATTG+AGG 0.601298 3_1:-70007454 Msa0371770:CDS
AATGGAAAGATGCTCTAACT+GGG 0.601589 3_1:-70007206 Msa0371770:CDS
GAAGAGAAATCGTCACTGAA+GGG 0.609977 3_1:-70006783 Msa0371770:CDS
AGATGCGTATGACTCCTCAA+TGG 0.610281 3_1:+70007440 None:intergenic
TCAGATGTGAGATTCCAGCT+TGG 0.613014 3_1:-70007294 Msa0371770:CDS
TATAGCTTTAGCAGCTAGCG+TGG 0.624314 3_1:+70006746 None:intergenic
TTGTACAAACGTGGTGATGT+TGG 0.626789 3_1:-70006453 Msa0371770:CDS
ATTCCAGCTTGGGAGTTTCG+GGG 0.637710 3_1:-70007283 Msa0371770:CDS
GAGAAATCGTCACTGAAGGG+CGG 0.670159 3_1:-70006780 Msa0371770:CDS
ACAAACGTGGTGATGTTGGA+AGG 0.684402 3_1:-70006449 Msa0371770:intron
AAGAAGATGTGTGGGCAGTG+CGG 0.684625 3_1:-70006193 Msa0371770:CDS
GTTTGTACAAGCCAAAATTG+GGG 0.698986 3_1:+70006466 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTAATCAAATAAAATTTA+TGG + chr3_1:70006829-70006848 None:intergenic 10.0%
!! TAGTAATCAAATAAAATTTA+TGG + chr3_1:70006829-70006848 None:intergenic 10.0%
!!! ATAAAAACGTCATATTTTTT+CGG + chr3_1:70006172-70006191 None:intergenic 15.0%
!! TTGTCTAAAGATTAATTAAT+TGG + chr3_1:70007446-70007465 None:intergenic 15.0%
!!! ATAAAAACGTCATATTTTTT+CGG + chr3_1:70006172-70006191 None:intergenic 15.0%
!! TTGTCTAAAGATTAATTAAT+TGG + chr3_1:70007446-70007465 None:intergenic 15.0%
!! TGACATGAATATATACATTT+GGG + chr3_1:70006723-70006742 None:intergenic 20.0%
!! ATGACATGAATATATACATT+TGG + chr3_1:70006724-70006743 None:intergenic 20.0%
!! AAATGTATATATTCATGTCA+TGG - chr3_1:70006723-70006742 Msa0371770:CDS 20.0%
!! GCATAATCAAATGAATAAAA+TGG - chr3_1:70007497-70007516 Msa0371770:CDS 20.0%
!! ATTGGAACTTATATTATTGA+TGG - chr3_1:70007602-70007621 Msa0371770:CDS 20.0%
!! TGACATGAATATATACATTT+GGG + chr3_1:70006723-70006742 None:intergenic 20.0%
!! ATGACATGAATATATACATT+TGG + chr3_1:70006724-70006743 None:intergenic 20.0%
!! AAATGTATATATTCATGTCA+TGG - chr3_1:70006723-70006742 Msa0371770:CDS 20.0%
!! GCATAATCAAATGAATAAAA+TGG - chr3_1:70007497-70007516 Msa0371770:CDS 20.0%
!! ATTGGAACTTATATTATTGA+TGG - chr3_1:70007602-70007621 Msa0371770:CDS 20.0%
! CAAGAAGGTTATAACATTTA+TGG - chr3_1:70006252-70006271 Msa0371770:intron 25.0%
!! CATTATCTTCACTATGTTTT+TGG - chr3_1:70006751-70006770 Msa0371770:CDS 25.0%
! TGATGAAAAATTAAGAGATG+AGG + chr3_1:70007350-70007369 None:intergenic 25.0%
! CAAGAAGGTTATAACATTTA+TGG - chr3_1:70006252-70006271 Msa0371770:intron 25.0%
!! CATTATCTTCACTATGTTTT+TGG - chr3_1:70006751-70006770 Msa0371770:CDS 25.0%
! TGATGAAAAATTAAGAGATG+AGG + chr3_1:70007350-70007369 None:intergenic 25.0%
!!! GACGTTTTTATTAGTTTTCG+TGG - chr3_1:70006181-70006200 Msa0371770:CDS 30.0%
!!! TTTTATTAGTTTTCGTGGTG+AGG - chr3_1:70006186-70006205 Msa0371770:CDS 30.0%
! TCTAGAATGCAAAAAAGAGT+TGG - chr3_1:70006411-70006430 Msa0371770:intron 30.0%
CTAGAATGCAAAAAAGAGTT+GGG - chr3_1:70006412-70006431 Msa0371770:intron 30.0%
! ATTGTGATACCTGTTTTCTA+CGG - chr3_1:70006439-70006458 Msa0371770:intron 30.0%
! CTGGGCAAGATTTTATAAAA+CGG - chr3_1:70006578-70006597 Msa0371770:CDS 30.0%
! TGGGCAAGATTTTATAAAAC+GGG - chr3_1:70006579-70006598 Msa0371770:CDS 30.0%
GTAAAGACAAGTTGCAAAAA+TGG - chr3_1:70006620-70006639 Msa0371770:CDS 30.0%
AATCCTATCATATGAATGAG+GGG + chr3_1:70006882-70006901 None:intergenic 30.0%
CAATCCTATCATATGAATGA+GGG + chr3_1:70006883-70006902 None:intergenic 30.0%
TCAATCCTATCATATGAATG+AGG + chr3_1:70006884-70006903 None:intergenic 30.0%
!! CTGTTGTTGAACTTTGATTT+TGG + chr3_1:70007116-70007135 None:intergenic 30.0%
AGCAAAGCAACTGAAATATT+TGG + chr3_1:70007142-70007161 None:intergenic 30.0%
AAACGTTCAAAGTTGGATAA+AGG - chr3_1:70007214-70007233 Msa0371770:CDS 30.0%
AACGTTCAAAGTTGGATAAA+GGG - chr3_1:70007215-70007234 Msa0371770:CDS 30.0%
GGAGCTTCAATGATAATAAT+GGG + chr3_1:70007244-70007263 None:intergenic 30.0%
TGGAGCTTCAATGATAATAA+TGG + chr3_1:70007245-70007264 None:intergenic 30.0%
AAAAAAGCAAGAAGATGTGT+GGG - chr3_1:70007565-70007584 Msa0371770:CDS 30.0%
ATATTTCAAGCCCTTAGATA+TGG - chr3_1:70007628-70007647 Msa0371770:CDS 30.0%
!!! GACGTTTTTATTAGTTTTCG+TGG - chr3_1:70006181-70006200 Msa0371770:CDS 30.0%
!!! TTTTATTAGTTTTCGTGGTG+AGG - chr3_1:70006186-70006205 Msa0371770:CDS 30.0%
! TCTAGAATGCAAAAAAGAGT+TGG - chr3_1:70006411-70006430 Msa0371770:intron 30.0%
CTAGAATGCAAAAAAGAGTT+GGG - chr3_1:70006412-70006431 Msa0371770:intron 30.0%
! ATTGTGATACCTGTTTTCTA+CGG - chr3_1:70006439-70006458 Msa0371770:intron 30.0%
! CTGGGCAAGATTTTATAAAA+CGG - chr3_1:70006578-70006597 Msa0371770:CDS 30.0%
! TGGGCAAGATTTTATAAAAC+GGG - chr3_1:70006579-70006598 Msa0371770:CDS 30.0%
GTAAAGACAAGTTGCAAAAA+TGG - chr3_1:70006620-70006639 Msa0371770:CDS 30.0%
AATCCTATCATATGAATGAG+GGG + chr3_1:70006882-70006901 None:intergenic 30.0%
CAATCCTATCATATGAATGA+GGG + chr3_1:70006883-70006902 None:intergenic 30.0%
TCAATCCTATCATATGAATG+AGG + chr3_1:70006884-70006903 None:intergenic 30.0%
!! CTGTTGTTGAACTTTGATTT+TGG + chr3_1:70007116-70007135 None:intergenic 30.0%
AGCAAAGCAACTGAAATATT+TGG + chr3_1:70007142-70007161 None:intergenic 30.0%
AAACGTTCAAAGTTGGATAA+AGG - chr3_1:70007214-70007233 Msa0371770:CDS 30.0%
AACGTTCAAAGTTGGATAAA+GGG - chr3_1:70007215-70007234 Msa0371770:CDS 30.0%
GGAGCTTCAATGATAATAAT+GGG + chr3_1:70007244-70007263 None:intergenic 30.0%
TGGAGCTTCAATGATAATAA+TGG + chr3_1:70007245-70007264 None:intergenic 30.0%
AAAAAAGCAAGAAGATGTGT+GGG - chr3_1:70007565-70007584 Msa0371770:CDS 30.0%
ATATTTCAAGCCCTTAGATA+TGG - chr3_1:70007628-70007647 Msa0371770:CDS 30.0%
TGTTGAAGCTTCTTCTATTG+TGG - chr3_1:70006141-70006160 Msa0371770:CDS 35.0%
ATCACTAATCAAAGCCATTG+AGG - chr3_1:70006312-70006331 Msa0371770:intron 35.0%
AAGACTACGCTTCTTCAAAA+TGG - chr3_1:70006365-70006384 Msa0371770:intron 35.0%
GGATTTATTCCGTAGAAAAC+AGG + chr3_1:70006451-70006470 None:intergenic 35.0%
AAATGGAAAGATGCTCTAAC+TGG - chr3_1:70006559-70006578 Msa0371770:CDS 35.0%
AATGGAAAGATGCTCTAACT+GGG - chr3_1:70006560-70006579 Msa0371770:CDS 35.0%
ATAGTAGAGCAAGAAGAACA+AGG + chr3_1:70006801-70006820 None:intergenic 35.0%
ATCCTATCATATGAATGAGG+GGG + chr3_1:70006881-70006900 None:intergenic 35.0%
! ATATTTCAGTTGCTTTGCTG+AGG - chr3_1:70007143-70007162 Msa0371770:CDS 35.0%
! TCATGATCTGATGAGTCTTT+TGG + chr3_1:70007178-70007197 None:intergenic 35.0%
GCAAGAAAAACGTTCAAAGT+TGG - chr3_1:70007207-70007226 Msa0371770:CDS 35.0%
TATCATTGAAGCTCCAAAGA+TGG - chr3_1:70007249-70007268 Msa0371770:CDS 35.0%
GTTTGTACAAGCCAAAATTG+GGG + chr3_1:70007303-70007322 None:intergenic 35.0%
CGTTTGTACAAGCCAAAATT+GGG + chr3_1:70007304-70007323 None:intergenic 35.0%
ACGTTTGTACAAGCCAAAAT+TGG + chr3_1:70007305-70007324 None:intergenic 35.0%
!!! AATTTTGGCTTGTACAAACG+TGG - chr3_1:70007304-70007323 Msa0371770:CDS 35.0%
! CAAATTTTACACACACTAGC+AGG - chr3_1:70007384-70007403 Msa0371770:CDS 35.0%
CAAAAAAGCAAGAAGATGTG+TGG - chr3_1:70007564-70007583 Msa0371770:CDS 35.0%
CTATACTCAGCCATATCTAA+GGG + chr3_1:70007641-70007660 None:intergenic 35.0%
TGTTGAAGCTTCTTCTATTG+TGG - chr3_1:70006141-70006160 Msa0371770:CDS 35.0%
ATCACTAATCAAAGCCATTG+AGG - chr3_1:70006312-70006331 Msa0371770:intron 35.0%
AAGACTACGCTTCTTCAAAA+TGG - chr3_1:70006365-70006384 Msa0371770:intron 35.0%
GGATTTATTCCGTAGAAAAC+AGG + chr3_1:70006451-70006470 None:intergenic 35.0%
AAATGGAAAGATGCTCTAAC+TGG - chr3_1:70006559-70006578 Msa0371770:CDS 35.0%
AATGGAAAGATGCTCTAACT+GGG - chr3_1:70006560-70006579 Msa0371770:CDS 35.0%
ATAGTAGAGCAAGAAGAACA+AGG + chr3_1:70006801-70006820 None:intergenic 35.0%
ATCCTATCATATGAATGAGG+GGG + chr3_1:70006881-70006900 None:intergenic 35.0%
! ATATTTCAGTTGCTTTGCTG+AGG - chr3_1:70007143-70007162 Msa0371770:CDS 35.0%
! TCATGATCTGATGAGTCTTT+TGG + chr3_1:70007178-70007197 None:intergenic 35.0%
GCAAGAAAAACGTTCAAAGT+TGG - chr3_1:70007207-70007226 Msa0371770:CDS 35.0%
TATCATTGAAGCTCCAAAGA+TGG - chr3_1:70007249-70007268 Msa0371770:CDS 35.0%
GTTTGTACAAGCCAAAATTG+GGG + chr3_1:70007303-70007322 None:intergenic 35.0%
CGTTTGTACAAGCCAAAATT+GGG + chr3_1:70007304-70007323 None:intergenic 35.0%
ACGTTTGTACAAGCCAAAAT+TGG + chr3_1:70007305-70007324 None:intergenic 35.0%
!!! AATTTTGGCTTGTACAAACG+TGG - chr3_1:70007304-70007323 Msa0371770:CDS 35.0%
! CAAATTTTACACACACTAGC+AGG - chr3_1:70007384-70007403 Msa0371770:CDS 35.0%
CAAAAAAGCAAGAAGATGTG+TGG - chr3_1:70007564-70007583 Msa0371770:CDS 35.0%
CTATACTCAGCCATATCTAA+GGG + chr3_1:70007641-70007660 None:intergenic 35.0%
GACGACAGTGATCTTGAAAA+AGG - chr3_1:70006274-70006293 Msa0371770:intron 40.0%
GTAGAAGCAACTTGCACAAA+TGG - chr3_1:70006542-70006561 Msa0371770:CDS 40.0%
ATATGAATGAGGGGGAAAGA+AGG + chr3_1:70006873-70006892 None:intergenic 40.0%
TTCCCCCTCATTCATATGAT+AGG - chr3_1:70006876-70006895 Msa0371770:intron 40.0%
TGAAGAGAAATCGTCACTGA+AGG - chr3_1:70006982-70007001 Msa0371770:intron 40.0%
GAAGAGAAATCGTCACTGAA+GGG - chr3_1:70006983-70007002 Msa0371770:intron 40.0%
TACCACCAAGCCATATTTGA+AGG - chr3_1:70007084-70007103 Msa0371770:intron 40.0%
!! TTGGTGTCGACCTTCAAATA+TGG + chr3_1:70007097-70007116 None:intergenic 40.0%
GGTCAAAACTGCAGCTAATT+CGG - chr3_1:70007270-70007289 Msa0371770:CDS 40.0%
! TCGGTTTATTGCCCCAATTT+TGG - chr3_1:70007289-70007308 Msa0371770:CDS 40.0%
! TTGTACAAACGTGGTGATGT+TGG - chr3_1:70007313-70007332 Msa0371770:CDS 40.0%
GCAGGAGCAACTAATTGATT+TGG - chr3_1:70007402-70007421 Msa0371770:CDS 40.0%
GCTATACTCAGCCATATCTA+AGG + chr3_1:70007642-70007661 None:intergenic 40.0%
GACGACAGTGATCTTGAAAA+AGG - chr3_1:70006274-70006293 Msa0371770:intron 40.0%
GTAGAAGCAACTTGCACAAA+TGG - chr3_1:70006542-70006561 Msa0371770:CDS 40.0%
ATATGAATGAGGGGGAAAGA+AGG + chr3_1:70006873-70006892 None:intergenic 40.0%
TTCCCCCTCATTCATATGAT+AGG - chr3_1:70006876-70006895 Msa0371770:intron 40.0%
TGAAGAGAAATCGTCACTGA+AGG - chr3_1:70006982-70007001 Msa0371770:intron 40.0%
GAAGAGAAATCGTCACTGAA+GGG - chr3_1:70006983-70007002 Msa0371770:intron 40.0%
TACCACCAAGCCATATTTGA+AGG - chr3_1:70007084-70007103 Msa0371770:intron 40.0%
!! TTGGTGTCGACCTTCAAATA+TGG + chr3_1:70007097-70007116 None:intergenic 40.0%
GGTCAAAACTGCAGCTAATT+CGG - chr3_1:70007270-70007289 Msa0371770:CDS 40.0%
! TCGGTTTATTGCCCCAATTT+TGG - chr3_1:70007289-70007308 Msa0371770:CDS 40.0%
! TTGTACAAACGTGGTGATGT+TGG - chr3_1:70007313-70007332 Msa0371770:CDS 40.0%
GCAGGAGCAACTAATTGATT+TGG - chr3_1:70007402-70007421 Msa0371770:CDS 40.0%
GCTATACTCAGCCATATCTA+AGG + chr3_1:70007642-70007661 None:intergenic 40.0%
AGATGCGTATGACTCCTCAA+TGG + chr3_1:70006329-70006348 None:intergenic 45.0%
AGCTGGAATCTCACATCTGA+TGG + chr3_1:70006472-70006491 None:intergenic 45.0%
TCAGATGTGAGATTCCAGCT+TGG - chr3_1:70006472-70006491 Msa0371770:CDS 45.0%
CAGATGTGAGATTCCAGCTT+GGG - chr3_1:70006473-70006492 Msa0371770:CDS 45.0%
AGATTCCAGCTTGGGAGTTT+CGG - chr3_1:70006481-70006500 Msa0371770:CDS 45.0%
! TTTGAAGCAGCCAACTTAGC+TGG - chr3_1:70006655-70006674 Msa0371770:CDS 45.0%
ATAGTCCCAACCAGCTAAGT+TGG + chr3_1:70006668-70006687 None:intergenic 45.0%
GTTGGGACTATCGAAATTGC+AGG - chr3_1:70006677-70006696 Msa0371770:CDS 45.0%
!! TATAGCTTTAGCAGCTAGCG+TGG + chr3_1:70007023-70007042 None:intergenic 45.0%
! CTTGGTGGTAGAGCAAGAAA+TGG + chr3_1:70007074-70007093 None:intergenic 45.0%
! GACCTTCAAATATGGCTTGG+TGG + chr3_1:70007089-70007108 None:intergenic 45.0%
GTCGACCTTCAAATATGGCT+TGG + chr3_1:70007092-70007111 None:intergenic 45.0%
!! GCTGCAGTTTTGACCATCTT+TGG + chr3_1:70007265-70007284 None:intergenic 45.0%
! ACAAACGTGGTGATGTTGGA+AGG - chr3_1:70007317-70007336 Msa0371770:CDS 45.0%
AGATGCGTATGACTCCTCAA+TGG + chr3_1:70006329-70006348 None:intergenic 45.0%
AGCTGGAATCTCACATCTGA+TGG + chr3_1:70006472-70006491 None:intergenic 45.0%
TCAGATGTGAGATTCCAGCT+TGG - chr3_1:70006472-70006491 Msa0371770:CDS 45.0%
CAGATGTGAGATTCCAGCTT+GGG - chr3_1:70006473-70006492 Msa0371770:CDS 45.0%
AGATTCCAGCTTGGGAGTTT+CGG - chr3_1:70006481-70006500 Msa0371770:CDS 45.0%
! TTTGAAGCAGCCAACTTAGC+TGG - chr3_1:70006655-70006674 Msa0371770:CDS 45.0%
ATAGTCCCAACCAGCTAAGT+TGG + chr3_1:70006668-70006687 None:intergenic 45.0%
GTTGGGACTATCGAAATTGC+AGG - chr3_1:70006677-70006696 Msa0371770:CDS 45.0%
!! TATAGCTTTAGCAGCTAGCG+TGG + chr3_1:70007023-70007042 None:intergenic 45.0%
! CTTGGTGGTAGAGCAAGAAA+TGG + chr3_1:70007074-70007093 None:intergenic 45.0%
! GACCTTCAAATATGGCTTGG+TGG + chr3_1:70007089-70007108 None:intergenic 45.0%
GTCGACCTTCAAATATGGCT+TGG + chr3_1:70007092-70007111 None:intergenic 45.0%
!! GCTGCAGTTTTGACCATCTT+TGG + chr3_1:70007265-70007284 None:intergenic 45.0%
! ACAAACGTGGTGATGTTGGA+AGG - chr3_1:70007317-70007336 Msa0371770:CDS 45.0%
GACACTCGCAGAAACTTCAC+AGG - chr3_1:70006208-70006227 Msa0371770:CDS 50.0%
!! TGCTCAGAGCATCGTAGAGA+TGG + chr3_1:70006234-70006253 None:intergenic 50.0%
! CTACGATGCTCTGAGCAAGA+AGG - chr3_1:70006237-70006256 Msa0371770:intron 50.0%
GATTCCAGCTTGGGAGTTTC+GGG - chr3_1:70006482-70006501 Msa0371770:CDS 50.0%
ATTCCAGCTTGGGAGTTTCG+GGG - chr3_1:70006483-70006502 Msa0371770:CDS 50.0%
AAGCAGCCAACTTAGCTGGT+TGG - chr3_1:70006659-70006678 Msa0371770:CDS 50.0%
AGCAGCCAACTTAGCTGGTT+GGG - chr3_1:70006660-70006679 Msa0371770:CDS 50.0%
GAGAAATCGTCACTGAAGGG+CGG - chr3_1:70006986-70007005 Msa0371770:intron 50.0%
AAGAAGATGTGTGGGCAGTG+CGG - chr3_1:70007573-70007592 Msa0371770:CDS 50.0%
GACACTCGCAGAAACTTCAC+AGG - chr3_1:70006208-70006227 Msa0371770:CDS 50.0%
!! TGCTCAGAGCATCGTAGAGA+TGG + chr3_1:70006234-70006253 None:intergenic 50.0%
! CTACGATGCTCTGAGCAAGA+AGG - chr3_1:70006237-70006256 Msa0371770:intron 50.0%
GATTCCAGCTTGGGAGTTTC+GGG - chr3_1:70006482-70006501 Msa0371770:CDS 50.0%
ATTCCAGCTTGGGAGTTTCG+GGG - chr3_1:70006483-70006502 Msa0371770:CDS 50.0%
AAGCAGCCAACTTAGCTGGT+TGG - chr3_1:70006659-70006678 Msa0371770:CDS 50.0%
AGCAGCCAACTTAGCTGGTT+GGG - chr3_1:70006660-70006679 Msa0371770:CDS 50.0%
GAGAAATCGTCACTGAAGGG+CGG - chr3_1:70006986-70007005 Msa0371770:intron 50.0%
AAGAAGATGTGTGGGCAGTG+CGG - chr3_1:70007573-70007592 Msa0371770:CDS 50.0%
CTTCCCCGAAACTCCCAAGC+TGG + chr3_1:70006489-70006508 None:intergenic 60.0%
TCGTCACTGAAGGGCGGCAT+AGG - chr3_1:70006992-70007011 Msa0371770:intron 60.0%
CTTCCCCGAAACTCCCAAGC+TGG + chr3_1:70006489-70006508 None:intergenic 60.0%
TCGTCACTGAAGGGCGGCAT+AGG - chr3_1:70006992-70007011 Msa0371770:intron 60.0%
TGGGCAGTGCGGCGCAGCAT+TGG - chr3_1:70007584-70007603 Msa0371770:CDS 70.0%
TGGGCAGTGCGGCGCAGCAT+TGG - chr3_1:70007584-70007603 Msa0371770:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 70006124 70007664 70006124 ID=Msa0371770;Name=Msa0371770
chr3_1 mRNA 70006124 70007664 70006124 ID=Msa0371770-mRNA-1;Parent=Msa0371770;Name=Msa0371770-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.5|0|1|1|1|3|0|368
chr3_1 exon 70007086 70007664 70007086 ID=Msa0371770-mRNA-1:exon:15078;Parent=Msa0371770-mRNA-1
chr3_1 exon 70006450 70006868 70006450 ID=Msa0371770-mRNA-1:exon:15077;Parent=Msa0371770-mRNA-1
chr3_1 exon 70006124 70006232 70006124 ID=Msa0371770-mRNA-1:exon:15076;Parent=Msa0371770-mRNA-1
chr3_1 CDS 70007086 70007664 70007086 ID=Msa0371770-mRNA-1:cds;Parent=Msa0371770-mRNA-1
chr3_1 CDS 70006450 70006868 70006450 ID=Msa0371770-mRNA-1:cds;Parent=Msa0371770-mRNA-1
chr3_1 CDS 70006124 70006232 70006124 ID=Msa0371770-mRNA-1:cds;Parent=Msa0371770-mRNA-1
Gene Sequence

>Msa0371770

ATGGCTATGCTGCAAAATGTTGAAGCTTCTTCTATTGTGGTGTCTCCGAAAAAATATGACGTTTTTATTAGTTTTCGTGGTGAGGACACTCGCAGAAACTTCACAGGCCATCTCTACGATGCTCTGAGCAAGAAGGTTATAACATTTATGGACGACAGTGATCTTGAAAAAGGAGATGAGATATCATCATCACTAATCAAAGCCATTGAGGAGTCATACGCATCTATAGTCATCTTTTCAAAAGACTACGCTTCTTCAAAATGGTGCTTGAATGAACTCGTCAAAATTCTAGAATGCAAAAAAGAGTTGGGACAAATTGTGATACCTGTTTTCTACGGAATAAATCCATCAGATGTGAGATTCCAGCTTGGGAGTTTCGGGGAAGCTTTTATAAAACACGAACAAGATTTGCAACATAGTAGAAGCAACTTGCACAAATGGAAAGATGCTCTAACTGGGCAAGATTTTATAAAACGGGAGCAAGATTTAGAGCACAGTAAAGACAAGTTGCAAAAATGGAAAGACGCTCTTTTTGAAGCAGCCAACTTAGCTGGTTGGGACTATCGAAATTGCAGGCAACTCATCGTCAAAGATGTTTCTAAAAAAGTTAATACAAAACTTGTTGAAATTGAGAAAAAGTATGAAGAGAAATCGTCACTGAAGGGCGGCATAGGAAAGACCACGCTAGCTGCTAAAGCTATAAACAGTGTAGAAAAAGCTATGTCTTTGTCCATTTCTTGCTCTACCACCAAGCCATATTTGAAGGTCGACACCAAAATCAAAGTTCAACAACAGATACCAAATATTTCAGTTGCTTTGCTGAGGTCACGTGAACCAAAAGACTCATCAGATCATGAGAATGAGTTGCAAGAAAAACGTTCAAAGTTGGATAAAGGGTCTCCCATTATTATCATTGAAGCTCCAAAGATGGTCAAAACTGCAGCTAATTCGGTTTATTGCCCCAATTTTGGCTTGTACAAACGTGGTGATGTTGGAAGAATTGTTTCAAAAAAGCAAGAAGATGTGTGGGCAGTGCGGCGCAGCATTGGAACTTATATTATTGATGGCAAATATTTCAAGCCCTTAGATATGGCTGAGTATAGCTAG
Protein sequence

>Msa0371770

MAMLQNVEASSIVVSPKKYDVFISFRGEDTRRNFTGHLYDALSKKVITFMDDSDLEKGDEISSSLIKAIEESYASIVIFSKDYASSKWCLNELVKILECKKELGQIVIPVFYGINPSDVRFQLGSFGEAFIKHEQDLQHSRSNLHKWKDALTGQDFIKREQDLEHSKDKLQKWKDALFEAANLAGWDYRNCRQLIVKDVSKKVNTKLVEIEKKYEEKSSLKGGIGKTTLAAKAINSVEKAMSLSISCSTTKPYLKVDTKIKVQQQIPNISVALLRSREPKDSSDHENELQEKRSKLDKGSPIIIIEAPKMVKTAANSVYCPNFGLYKRGDVGRIVSKKQEDVWAVRRSIGTYIIDGKYFKPLDMAEYS*