AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0373760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0373760 MtrunA17_Chr3g0123261 88.162 1208 110 10 1 1195 1 1188 0.0 1839
Msa0373760 MtrunA17_Chr2g0297201 42.529 87 50 0 10 96 8 94 2.75e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0373760 AT5G37190.2 36.242 149 91 2 12 159 15 160 9.72e-21 99.4
Msa0373760 AT5G37190.3 36.242 149 91 2 12 159 15 160 1.07e-20 99.0
Msa0373760 AT5G37190.1 36.242 149 91 2 12 159 15 160 1.41e-20 99.0
Msa0373760 AT4G00930.2 47.500 80 42 0 12 91 15 94 8.48e-19 93.2
Msa0373760 AT4G00930.5 47.500 80 42 0 12 91 15 94 9.21e-19 93.2
Msa0373760 AT4G00930.3 47.500 80 42 0 12 91 15 94 9.38e-19 93.2
Msa0373760 AT4G00930.1 47.500 80 42 0 12 91 15 94 9.46e-19 93.2
Msa0373760 AT4G00930.4 47.500 80 42 0 12 91 15 94 1.03e-18 93.2
Msa0373760 AT4G00580.1 44.444 90 48 2 5 92 1 90 1.57e-18 88.6
Msa0373760 AT1G30060.1 43.182 88 49 1 11 97 9 96 3.02e-18 84.3
Msa0373760 AT2G01800.2 44.828 87 47 1 12 97 10 96 3.35e-18 86.3
Msa0373760 AT2G01800.3 44.828 87 47 1 12 97 10 96 4.78e-18 86.3
Msa0373760 AT2G01800.1 44.828 87 47 1 12 97 10 96 5.53e-18 86.7
Msa0373760 AT4G00920.1 46.512 86 44 1 12 97 15 98 3.15e-17 84.7
Msa0373760 AT4G00580.2 42.169 83 47 1 11 92 1 83 5.72e-16 80.9
Msa0373760 AT2G02770.1 45.745 94 48 3 5 97 1 92 8.49e-16 79.7
Msa0373760 AT1G55865.1 35.227 88 57 0 12 99 9 96 8.83e-14 73.2

Find 262 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTGTATTTGTCCGATTT+TGG 0.076793 3_1:-72828130 None:intergenic
AATCAGACAGATTGTAAATT+AGG 0.138629 3_1:+72827853 Msa0373760:five_prime_UTR
GTCATCCTTAGTGCCTTTAT+TGG 0.184884 3_1:-72829514 None:intergenic
TCACATTGAGTATGTGAATT+TGG 0.200820 3_1:-72829828 None:intergenic
TCACATTCAATATGTGAATT+TGG 0.206092 3_1:-72829480 None:intergenic
TATATATACTCAAGGGTTTA+TGG 0.207717 3_1:-72827805 None:intergenic
TCAAGCTTTGCATTTGAAAT+AGG 0.213129 3_1:-72831340 None:intergenic
AAATATCGCAACAGTGCTTC+TGG 0.244602 3_1:+72831280 Msa0373760:CDS
CAATTGAGAGGCTGTCATTC+TGG 0.261798 3_1:-72832881 None:intergenic
AAAAGAAGCTGTAAGAAATT+TGG 0.276686 3_1:+72829449 Msa0373760:CDS
TGCAGATAAAGAAGTGATTA+AGG 0.288920 3_1:+72830055 Msa0373760:CDS
TTCTTAGGCTTCTTCTTTAG+AGG 0.290983 3_1:-72830176 None:intergenic
AATAATGCTTTAGTTGGTTC+TGG 0.300663 3_1:+72828436 Msa0373760:CDS
ATCAGACAGATTGTAAATTA+GGG 0.306363 3_1:+72827854 Msa0373760:five_prime_UTR
TGGATCAGATAAAGGCATTA+AGG 0.306448 3_1:+72829857 Msa0373760:CDS
GCTTGAAGGTTCCAACAAAA+TGG 0.312808 3_1:+72831357 Msa0373760:CDS
AAAAGAAAATCAGCACTGTT+TGG 0.323408 3_1:-72833018 None:intergenic
CATTCTTTGTCCAGTTTGTC+AGG 0.328647 3_1:+72832802 Msa0373760:intron
GGTTCTGGTGGCGATAATAA+TGG 0.333510 3_1:+72828451 Msa0373760:CDS
CATATTGAATGTGAAGTAGA+TGG 0.341253 3_1:+72829150 Msa0373760:CDS
TTCTGGGAAAAGTAAGGATT+TGG 0.343928 3_1:+72831297 Msa0373760:CDS
AATATTGAATGTGAAGTAGA+TGG 0.344604 3_1:+72828913 Msa0373760:CDS
TATTCTCCAACAATTGCAAC+TGG 0.345038 3_1:-72828495 None:intergenic
TGGACCCGGTGGAGGAAATA+AGG 0.347205 3_1:+72828933 Msa0373760:CDS
AATACAGATTCATGGCATTA+AGG 0.348777 3_1:+72828143 Msa0373760:CDS
CAAAACGAATCTTGACAAAA+TGG 0.349538 3_1:+72830460 Msa0373760:CDS
CTTTCATGCTTTCCCAAAAT+CGG 0.353022 3_1:+72828117 Msa0373760:CDS
AAGGACAGGGCATAAGATAA+AGG 0.358550 3_1:+72827770 None:intergenic
CTTCGTCAGGTGGAATCTAT+TGG 0.359366 3_1:+72828406 Msa0373760:CDS
ATCATCCTTATTTCTTTCAC+TGG 0.361468 3_1:-72829175 None:intergenic
GGAAGGGATGGTAATGTTAC+AGG 0.363553 3_1:+72830925 Msa0373760:CDS
CACCTGAAAATTGTTGAAAC+TGG 0.364926 3_1:-72829703 None:intergenic
TGGATCCAGTGAAAGAAATA+AGG 0.367960 3_1:+72829170 Msa0373760:CDS
TACCTGAAAATCATTGAAAC+TGG 0.372298 3_1:-72829355 None:intergenic
GATCAGAGGCCCTGGCTCTC+TGG 0.376201 3_1:-72832919 None:intergenic
AAAGAAAATCAGCACTGTTT+GGG 0.376917 3_1:-72833017 None:intergenic
TAATTCCCAGTTGCAATTGT+TGG 0.377726 3_1:+72828489 Msa0373760:CDS
TAAAGGAGGTGTCGCGAATA+TGG 0.379116 3_1:+72828576 Msa0373760:CDS
ATACTCAAGGGTTTATGGTT+TGG 0.380712 3_1:-72827800 None:intergenic
CGCGGACAATGCTGATTCCT+TGG 0.381471 3_1:+72831000 Msa0373760:CDS
AGGACAATATTCCGCTTAAC+TGG 0.381516 3_1:-72830014 None:intergenic
TTCTGTTAGGTTAAACGTAA+TGG 0.381981 3_1:+72828247 Msa0373760:intron
GTAGAAGATTGTTTGTTGTT+TGG 0.383134 3_1:-72831091 None:intergenic
GAACACATGGGCGATCAAAA+AGG 0.384695 3_1:-72829764 None:intergenic
CTGTCATACCCGTCTGAATA+GGG 0.386017 3_1:-72831571 None:intergenic
GCAGAAGAAAAGCTTGTTAG+AGG 0.387282 3_1:+72831441 Msa0373760:CDS
GGAGAATGGTGTCAAATTAC+TGG 0.387636 3_1:+72828597 Msa0373760:CDS
AATAAAGCAAGAAAAGCTTC+TGG 0.390306 3_1:+72831385 Msa0373760:CDS
TTCTTTCTTCTCTTTGCACT+TGG 0.393142 3_1:-72828997 None:intergenic
ATTGAAACTGGATGTCCTTT+CGG 0.393196 3_1:-72829343 None:intergenic
GTTCTTTCTGTGACTGATAA+GGG 0.394797 3_1:+72830965 Msa0373760:CDS
ATCAGCACTGTTTGGGATGA+AGG 0.395060 3_1:-72833010 None:intergenic
ATTTCAAATGCAAAGCTTGA+AGG 0.398243 3_1:+72831343 Msa0373760:CDS
ACCTCATGGTTCACTTCGTC+AGG 0.399138 3_1:+72828393 Msa0373760:CDS
TGTAGAGTCTTGTGAGCATT+TGG 0.399427 3_1:-72831199 None:intergenic
TCTTGTTTGTTCCTTGATTG+AGG 0.399643 3_1:-72829378 None:intergenic
TGTTCTTTCTGTGACTGATA+AGG 0.402333 3_1:+72830964 Msa0373760:CDS
GTTCTGGTGGCGATAATAAT+GGG 0.403199 3_1:+72828452 Msa0373760:CDS
TAATTTACAATCTGTCTGAT+TGG 0.407304 3_1:-72827851 None:intergenic
GTTATCCTCCATCAGATCCT+TGG 0.410018 3_1:-72830597 None:intergenic
GAAGTAGATGAGCTTGATAA+AGG 0.413339 3_1:+72828718 Msa0373760:CDS
ATTAACTTACCTTGCTTTGA+AGG 0.420745 3_1:-72832092 None:intergenic
TTCTTGGTGTCAACAAAAGC+TGG 0.420812 3_1:+72828314 Msa0373760:CDS
ATCATCCTTATTTCCTCCAC+CGG 0.421558 3_1:-72828938 None:intergenic
AGAGAAAACGGAAGAGTAAG+AGG 0.422602 3_1:+72828800 Msa0373760:CDS
TTATCACTTATCTGATTCAA+TGG 0.425726 3_1:+72828276 Msa0373760:CDS
TGGAGAATAAGAAAGATAAG+AGG 0.426865 3_1:+72828509 Msa0373760:CDS
CATACTCAATGTGAGGTAGA+TGG 0.426882 3_1:+72829837 Msa0373760:CDS
CTTCTTCTTTGCACTTTGTA+CGG 0.427088 3_1:-72829916 None:intergenic
TTCTTATGATGGGAAAAGAT+TGG 0.428177 3_1:+72832051 Msa0373760:CDS
TAAACAAGGTGATATTGAAA+TGG 0.432155 3_1:+72830547 Msa0373760:CDS
AGAAGAAGCATAAGAGTGTA+AGG 0.435465 3_1:+72829931 Msa0373760:CDS
ATCTGCATTCTCTGCAAAGA+TGG 0.437273 3_1:-72830039 None:intergenic
AATCTTGACAAAATGGAGAT+TGG 0.437924 3_1:+72830467 Msa0373760:CDS
GAAACAAGTGGGCGGTCAAA+GGG 0.442376 3_1:-72829414 None:intergenic
GAGGATAACGAGAATGTTGT+TGG 0.442804 3_1:+72830611 Msa0373760:CDS
GCACTTGGCACTGATATTGA+AGG 0.443827 3_1:-72828982 None:intergenic
ATCGGACAAATACAGATTCA+TGG 0.447220 3_1:+72828135 Msa0373760:CDS
CATATCTGATGTGCTCTTTG+AGG 0.447860 3_1:-72831113 None:intergenic
TAATTCTACAGAACCTTTGA+AGG 0.447897 3_1:+72830220 Msa0373760:CDS
AGGACAGGGCATAAGATAAA+GGG 0.448059 3_1:+72827771 None:intergenic
CTCAAGGGTTTATGGTTTGG+TGG 0.451141 3_1:-72827797 None:intergenic
GACTCTATTGTATGCGAGAA+AGG 0.452166 3_1:+72829882 Msa0373760:CDS
GGTGTTGATTCACAACAAAA+TGG 0.455873 3_1:+72831598 Msa0373760:CDS
TACTGAAGTTCCAGAGAGCC+AGG 0.457592 3_1:+72832909 Msa0373760:CDS
CATACACTTAGAGCAGATAA+TGG 0.458702 3_1:+72830788 Msa0373760:CDS
AAAACCAGCAAAGGAACATA+AGG 0.459013 3_1:+72830733 Msa0373760:CDS
ACTGTATCAGGTTCTTATGA+TGG 0.459015 3_1:+72832040 Msa0373760:intron
GGATCAGATAAAGGCATTAA+GGG 0.459269 3_1:+72829858 Msa0373760:CDS
ACTGTCATACCCGTCTGAAT+AGG 0.460698 3_1:-72831572 None:intergenic
CAGTCTCCAACAAAAGAAAC+AGG 0.460870 3_1:+72830515 Msa0373760:CDS
CAGAATGACAGCCTCTCAAT+TGG 0.462627 3_1:+72832882 Msa0373760:CDS
GCACTTGGCACAGATATTGA+AGG 0.468353 3_1:-72829219 None:intergenic
TTATCCTCCATCAGATCCTT+GGG 0.469062 3_1:-72830596 None:intergenic
AAACCAGCAAAGGAACATAA+GGG 0.474216 3_1:+72830734 Msa0373760:CDS
GCTGGTAAAATTGAGGGAGC+TGG 0.474973 3_1:+72830656 Msa0373760:CDS
AGAAGCTCCAAGTTTACCTA+TGG 0.479624 3_1:+72828690 Msa0373760:CDS
CTCTTGACCTTCATCTTCAG+AGG 0.482855 3_1:-72831494 None:intergenic
GGAGAATAAGAAAGATAAGA+GGG 0.483094 3_1:+72828510 Msa0373760:CDS
TCACATTCCATAGGTAAACT+TGG 0.484317 3_1:-72828697 None:intergenic
AAAATTGAGGGAGCTGGGGA+AGG 0.486495 3_1:+72830662 Msa0373760:CDS
GGGAGATACATCATCTCAAA+AGG 0.486619 3_1:+72830241 Msa0373760:CDS
ATTGTGAATAATGCTTTAGT+TGG 0.487927 3_1:+72828430 Msa0373760:CDS
TAAAGAAGAAGCCTAAGAAA+AGG 0.490052 3_1:+72830180 Msa0373760:CDS
TCACATTCAATATTTAAACT+TGG 0.490981 3_1:-72828904 None:intergenic
AATATCGCAACAGTGCTTCT+GGG 0.491673 3_1:+72831281 Msa0373760:CDS
GTTTCTCAACATACTGCTAA+AGG 0.497971 3_1:+72828559 Msa0373760:CDS
TGAAATGGAAGTACAGCCTT+CGG 0.506259 3_1:+72830562 Msa0373760:CDS
AGAAACCGTTTGTGATCCTC+CGG 0.507621 3_1:+72830859 Msa0373760:CDS
CATTGTCATGAAAGTGAAGC+TGG 0.507765 3_1:+72830638 Msa0373760:CDS
CTGGTAAAATTGAGGGAGCT+GGG 0.508211 3_1:+72830657 Msa0373760:CDS
CAGTGCTTCTGGGAAAAGTA+AGG 0.510440 3_1:+72831291 Msa0373760:CDS
TCTGTATGCTCTGGAACACA+TGG 0.512359 3_1:-72829777 None:intergenic
AAACTGGATGCCCTTTCAGA+TGG 0.514071 3_1:-72829687 None:intergenic
TGCAGAGTGGGAAGAGAAAA+CGG 0.514904 3_1:+72828788 Msa0373760:CDS
GATACGGCGATTCCATTGCT+TGG 0.515224 3_1:+72828628 Msa0373760:CDS
ACGGTGCCGGAGTCAGAAAT+CGG 0.516509 3_1:-72827908 None:intergenic
TAGTGTTGATGTTTCTGCAT+TGG 0.516697 3_1:+72828342 Msa0373760:CDS
CGTGTTCGTATATATACTCA+AGG 0.517895 3_1:-72827813 None:intergenic
CTAAATCAAACTGAAGAGGA+AGG 0.518575 3_1:+72830908 Msa0373760:CDS
GAGGTACATGAATCCAATAA+AGG 0.519585 3_1:+72829501 Msa0373760:CDS
TGAAACAAGTGGGCGGTCAA+AGG 0.520071 3_1:-72829415 None:intergenic
TCCGGAAAATGTTGCAACAC+AGG 0.521022 3_1:+72830877 Msa0373760:CDS
CTGTATCAGGTTCTTATGAT+GGG 0.521102 3_1:+72832041 Msa0373760:intron
TGATTATAGATCAGAGGCCC+TGG 0.521975 3_1:-72832927 None:intergenic
CATTCTCTGCAAAGATGGCT+AGG 0.524802 3_1:-72830034 None:intergenic
GACTCTATTGTATGTGAGGA+AGG 0.524881 3_1:+72829534 Msa0373760:CDS
TTTCTTTCAAAGTGTCATCT+CGG 0.526131 3_1:-72829971 None:intergenic
AAGTGAAGCTGGTAAAATTG+AGG 0.527199 3_1:+72830649 Msa0373760:CDS
CTCTCGACTGTCCATCTGAA+AGG 0.528617 3_1:+72829676 Msa0373760:CDS
TGATGTACACGGGATTGATA+AGG 0.528873 3_1:+72831174 Msa0373760:CDS
ACATCAGATATGCTCACAAA+TGG 0.531038 3_1:+72831124 Msa0373760:CDS
GAAGTAGATGGACCCGGTGG+AGG 0.531818 3_1:+72828925 Msa0373760:CDS
TCTCGACTGTCCATCTGAAA+GGG 0.532726 3_1:+72829677 Msa0373760:CDS
GATGAAACACAAACGGCTGA+TGG 0.533297 3_1:+72830263 Msa0373760:CDS
GTCAACGTTCTTACCGGCTG+AGG 0.534504 3_1:+72833230 Msa0373760:three_prime_UTR
GAGGTAGATGGATCAGATAA+AGG 0.535818 3_1:+72829849 Msa0373760:CDS
GAAACACGTGGGTGATCAGA+AGG 0.536575 3_1:-72829075 None:intergenic
CGATAATAACACTGCGAACG+AGG 0.536966 3_1:+72830112 Msa0373760:CDS
TTAACTTACCTTGCTTTGAA+GGG 0.537573 3_1:-72832091 None:intergenic
TGAATCCAATAAAGGCACTA+AGG 0.538509 3_1:+72829509 Msa0373760:CDS
CTGATGGAGCTCACGAGGGA+AGG 0.538555 3_1:+72830279 Msa0373760:CDS
AGTGAAGCTGGTAAAATTGA+GGG 0.539462 3_1:+72830650 Msa0373760:CDS
GATGATGTATCTCCCTTCAA+AGG 0.545208 3_1:-72830233 None:intergenic
AAACTGGATGTCCTTTCGGA+TGG 0.545328 3_1:-72829339 None:intergenic
AATTGCAACTGGGAATTACA+AGG 0.548758 3_1:-72828484 None:intergenic
CTTTCGGATGGACAAACGAC+AGG 0.549499 3_1:-72829327 None:intergenic
AAAAGAAGCCACTGTGGTAG+GGG 0.549655 3_1:+72829032 Msa0373760:CDS
ATCGATGAAGACGACGGTGC+CGG 0.551238 3_1:-72827921 None:intergenic
TAGAGGAGATTTAAGTTCTG+AGG 0.553635 3_1:-72830159 None:intergenic
TAGAGCAGATAATGGTCTTG+TGG 0.553835 3_1:+72830796 Msa0373760:CDS
GAAGCCACTGTGGTAGGGGA+TGG 0.555354 3_1:+72829036 Msa0373760:CDS
ACGTCTACGATCATCTGTCT+TGG 0.557416 3_1:-72828659 None:intergenic
AAATAAAGATGATGATAATG+TGG 0.557657 3_1:+72828741 Msa0373760:CDS
CAATTGATGATGTTGTTAGA+AGG 0.558706 3_1:+72832839 Msa0373760:CDS
AGCTGCCACACATTTGGAGA+TGG 0.560662 3_1:+72829803 Msa0373760:CDS
CCGGAAAATGTTGCAACACA+GGG 0.560809 3_1:+72830878 Msa0373760:CDS
AATAAGAAAGATAAGAGGGA+AGG 0.561237 3_1:+72828514 Msa0373760:CDS
GTCGGAGACGGTATCGTGAT+CGG 0.561541 3_1:-72827978 None:intergenic
AACATCTAATGCTGAAAATG+TGG 0.561789 3_1:+72831036 Msa0373760:CDS
TCAAAAGGATGAAACACAAA+CGG 0.563089 3_1:+72830256 Msa0373760:CDS
CACTTGCACCCTATTCAGAC+GGG 0.565820 3_1:+72831563 Msa0373760:CDS
TACAAACCTCGATACTCACT+TGG 0.566654 3_1:+72827943 Msa0373760:CDS
GTCAGATGGAGTTCTAGTGC+TGG 0.567675 3_1:-72831536 None:intergenic
TCACTTGCACCCTATTCAGA+CGG 0.568423 3_1:+72831562 Msa0373760:CDS
AGATGATGATAATGTGGGTG+TGG 0.568988 3_1:+72828747 Msa0373760:CDS
TCTTCTAAATCAAACTGAAG+AGG 0.569044 3_1:+72830904 Msa0373760:CDS
AAAGAAGTCCCTTCAAAGCA+AGG 0.570186 3_1:+72832083 Msa0373760:CDS
AATGCTTTAGTTGGTTCTGG+TGG 0.570622 3_1:+72828439 Msa0373760:CDS
GACGGTATCGTGATCGGAGA+CGG 0.572722 3_1:-72827972 None:intergenic
GGTTAATGCTGTGACAATGA+AGG 0.574150 3_1:+72830133 Msa0373760:CDS
TTGGAGTTTGAACCAAGCAA+TGG 0.575376 3_1:-72828640 None:intergenic
ATTACTGGGTGATAATGATA+CGG 0.575467 3_1:+72828612 Msa0373760:CDS
TGATGACGTGAATAGAATGA+AGG 0.575937 3_1:+72830703 Msa0373760:CDS
GAGGACATGGCGCTGTTAGA+CGG 0.575971 3_1:-72831241 None:intergenic
GAATGAGCCCAAGGATCTGA+TGG 0.577907 3_1:+72830589 Msa0373760:CDS
GCAACACGCAGACGATCAGA+AGG 0.583703 3_1:-72828838 None:intergenic
AAGAAAGAGCGTGATGTACA+CGG 0.583917 3_1:+72831163 Msa0373760:CDS
AAAGGTAAGAATAAAGGTGG+AGG 0.584042 3_1:+72830764 Msa0373760:CDS
AGCTGTAAGAAATTTGGAGA+TGG 0.584696 3_1:+72829455 Msa0373760:CDS
CTTCAATGTCTGTGCAGAGT+GGG 0.585400 3_1:+72828776 Msa0373760:CDS
GTAGGGGATGGATCAAAAGA+AGG 0.586269 3_1:+72829048 Msa0373760:CDS
TCAAACTGAAGAGGAAGGGA+TGG 0.587094 3_1:+72830913 Msa0373760:CDS
AAATTCACATATTGAATGTG+AGG 0.590954 3_1:+72829482 Msa0373760:CDS
AACGGCTGATGGAGCTCACG+AGG 0.591346 3_1:+72830274 Msa0373760:CDS
TCATCTACTTCACATTCCAT+AGG 0.591952 3_1:-72828706 None:intergenic
AAGCAAAGATATCACAACTA+CGG 0.592444 3_1:-72832980 None:intergenic
AGCAGTTCCTCTGAAGATGA+AGG 0.592851 3_1:+72831487 Msa0373760:CDS
AATTCTACAGAACCTTTGAA+GGG 0.593224 3_1:+72830221 Msa0373760:CDS
TGCGTAAGCAGTGTGCGAGA+TGG 0.595355 3_1:+72827880 Msa0373760:exon
GGTGTCGCGAATATGGAGAA+TGG 0.597432 3_1:+72828583 Msa0373760:CDS
TCATCCTTATTTCCTCCACC+GGG 0.598913 3_1:-72828937 None:intergenic
CTGTTGTTGTACCAGTTAAG+CGG 0.599174 3_1:+72830003 Msa0373760:CDS
CAGTGTTACGTGAAACAAGT+GGG 0.602671 3_1:-72829425 None:intergenic
ATTCTCCAACAATTGCAACT+GGG 0.603055 3_1:-72828494 None:intergenic
CAGAAGAAAAGCTTGTTAGA+GGG 0.603287 3_1:+72831442 Msa0373760:CDS
TAAATCAAACTGAAGAGGAA+GGG 0.603370 3_1:+72830909 Msa0373760:CDS
TCATGGTTCACTTCGTCAGG+TGG 0.604108 3_1:+72828396 Msa0373760:CDS
GGATGACTCTATTGTATGTG+AGG 0.604480 3_1:+72829530 Msa0373760:CDS
TCAGACGGGTATGACAGTCC+AGG 0.604817 3_1:+72831577 Msa0373760:CDS
TTCGGATGTGAATGAGCCCA+AGG 0.606560 3_1:+72830580 Msa0373760:CDS
GTGTTCGTATATATACTCAA+GGG 0.608988 3_1:-72827812 None:intergenic
AGCTTCTGGAAATAATGTCA+TGG 0.609382 3_1:+72831399 Msa0373760:CDS
TTCAGTATCATCCAATTGAG+AGG 0.610780 3_1:-72832893 None:intergenic
CTTTCAGATGGACAGTCGAG+AGG 0.612247 3_1:-72829675 None:intergenic
ATAATGCAGAGTACCTCAGC+CGG 0.612673 3_1:-72833243 None:intergenic
TTGGGCTCATTCACATCCGA+AGG 0.614175 3_1:-72830578 None:intergenic
AAGCTTGTTTACGGATCATG+CGG 0.615796 3_1:+72833041 Msa0373760:three_prime_UTR
TGTTGCAGAGCAGAATGAAA+AGG 0.617143 3_1:+72828855 Msa0373760:CDS
TGAAGATGAAGGTCAAGAGA+AGG 0.620985 3_1:+72831498 Msa0373760:CDS
AGAAAGAGCGTGATGTACAC+GGG 0.621805 3_1:+72831164 Msa0373760:CDS
GGAACCTGTAAAACCAGCAA+AGG 0.623921 3_1:+72830724 Msa0373760:CDS
CTGTCGTTTGTCCATCCGAA+AGG 0.624082 3_1:+72829328 Msa0373760:CDS
AATAAAGATGATGATAATGT+GGG 0.628938 3_1:+72828742 Msa0373760:CDS
AAGAATAAGAAAGACACTGT+GGG 0.630004 3_1:+72829264 Msa0373760:CDS
AACCAGCAAAGGAACATAAG+GGG 0.634243 3_1:+72830735 Msa0373760:CDS
GAGAATGGTGTCAAATTACT+GGG 0.636399 3_1:+72828598 Msa0373760:CDS
AACTTGTGATTATAGATCAG+AGG 0.636441 3_1:-72832933 None:intergenic
GGTGCAAGTGAATTGTCAGA+TGG 0.636709 3_1:-72831550 None:intergenic
AAACACGTGGGTGATCAGAA+GGG 0.637541 3_1:-72829074 None:intergenic
GCGACGCCGATTTCTGACTC+CGG 0.637689 3_1:+72827902 Msa0373760:CDS
GTTTATTAATTATACCATCG+TGG 0.638646 3_1:+72833084 Msa0373760:three_prime_UTR
GAAGGGATGGTAATGTTACA+GGG 0.639728 3_1:+72830926 Msa0373760:CDS
AAACAAGTGGGCGGTCAAAG+GGG 0.640554 3_1:-72829413 None:intergenic
TCACATTCAATATGTAAACT+CGG 0.640787 3_1:-72829141 None:intergenic
GGACAGGGCATAAGATAAAG+GGG 0.643211 3_1:+72827772 None:intergenic
ACCAGCAAAGGAACATAAGG+GGG 0.644082 3_1:+72830736 Msa0373760:CDS
TCAGTGTTACGTGAAACAAG+TGG 0.647489 3_1:-72829426 None:intergenic
CAACACGCAGACGATCAGAA+GGG 0.649775 3_1:-72828837 None:intergenic
AACACGCAGACGATCAGAAG+GGG 0.653252 3_1:-72828836 None:intergenic
AAGGGATGGTAATGTTACAG+GGG 0.655513 3_1:+72830927 Msa0373760:CDS
TGGTAAAATTGAGGGAGCTG+GGG 0.656357 3_1:+72830658 Msa0373760:CDS
TGGAACCATCTCCAAATGTG+TGG 0.657722 3_1:-72829808 None:intergenic
TAATGCTGTGACAATGAAGG+AGG 0.660473 3_1:+72830136 Msa0373760:CDS
CTTGGCACTGATATTGAAGG+TGG 0.661039 3_1:-72828979 None:intergenic
TGACAAAATGGAGATTGGAG+CGG 0.661881 3_1:+72830472 Msa0373760:CDS
TCTTCAATGTCTGTGCAGAG+TGG 0.662030 3_1:+72828775 Msa0373760:CDS
AGGGATGGTAATGTTACAGG+GGG 0.664659 3_1:+72830928 Msa0373760:CDS
GGTTCTGTAGAATTATGAGT+CGG 0.667556 3_1:-72830212 None:intergenic
CTGTATGCTCTGGAACACAT+GGG 0.670102 3_1:-72829776 None:intergenic
TGATCCATCCCCTACCACAG+TGG 0.673212 3_1:-72829040 None:intergenic
ACTGAAGTTCCAGAGAGCCA+GGG 0.673735 3_1:+72832910 Msa0373760:CDS
GAGGGAAGGAAAGAATCAGA+AGG 0.674236 3_1:+72830293 Msa0373760:CDS
AAAGAATAAGAAAGACACTG+TGG 0.674627 3_1:+72829263 Msa0373760:CDS
ACAGGAAATAATAATAAACA+AGG 0.678613 3_1:+72830533 Msa0373760:CDS
TGAGCCCAAGGATCTGATGG+AGG 0.679260 3_1:+72830592 Msa0373760:CDS
AAATTCACATACTCAATGTG+AGG 0.682423 3_1:+72829830 Msa0373760:CDS
AATAAGAAAGACACTGTGGG+AGG 0.684200 3_1:+72829267 Msa0373760:CDS
GCAGTATGTTGAGAAACACA+AGG 0.685468 3_1:-72828553 None:intergenic
ATGTTGTTAGAAGGTCAACA+AGG 0.694006 3_1:+72832848 Msa0373760:CDS
CTTTCTGTGACTGATAAGGG+AGG 0.696192 3_1:+72830968 Msa0373760:CDS
TCAGTGTGCTCTGAAACACG+TGG 0.697465 3_1:-72829087 None:intergenic
ACGGCTGATGGAGCTCACGA+GGG 0.700645 3_1:+72830275 Msa0373760:CDS
TCTCAACATACTGCTAAAGG+AGG 0.700816 3_1:+72828562 Msa0373760:CDS
GAATGTGAAGTAGATGGACC+CGG 0.706699 3_1:+72828919 Msa0373760:CDS
CAGTATGTTGAGAAACACAA+GGG 0.708126 3_1:-72828552 None:intergenic
TGAGAGCCAAGTGAGTATCG+AGG 0.730669 3_1:-72827949 None:intergenic
CAGTGTGCTCTGAAACACGT+GGG 0.731588 3_1:-72829086 None:intergenic
GTTTGTATCGATGAAGACGA+CGG 0.734199 3_1:-72827927 None:intergenic
TGTGAAGTAGATGGACCCGG+TGG 0.761846 3_1:+72828922 Msa0373760:CDS
TGTTACGTGAAACAAGTGGG+CGG 0.765301 3_1:-72829422 None:intergenic
ACCTGACGAAGTGAACCATG+AGG 0.777791 3_1:-72828394 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAACACAAAAATTAAT+AGG - chr3_1:72830360-72830379 None:intergenic 10.0%
!! CCACAAAAATAATAATAATT+GGG - chr3_1:72830423-72830442 None:intergenic 15.0%
!!! CCAATTATTATTATTTTTGT+GGG + chr3_1:72830421-72830440 Msa0373760:intron 15.0%
!! ATAACGAATTATAAATTAGA+AGG - chr3_1:72832236-72832255 None:intergenic 15.0%
!! ATACAAATAATAAGAAATGA+TGG + chr3_1:72832381-72832400 Msa0373760:intron 15.0%
!!! AAATAAAGATGATGATAATG+TGG + chr3_1:72828741-72828760 Msa0373760:CDS 20.0%
!!! AATAAAGATGATGATAATGT+GGG + chr3_1:72828742-72828761 Msa0373760:CDS 20.0%
!! TCACATTCAATATTTAAACT+TGG - chr3_1:72828907-72828926 None:intergenic 20.0%
!! TAACACAAAAATTAATAGGA+AGG - chr3_1:72830356-72830375 None:intergenic 20.0%
!!! CCCAATTATTATTATTTTTG+TGG + chr3_1:72830420-72830439 Msa0373760:intron 20.0%
!! CCCACAAAAATAATAATAAT+TGG - chr3_1:72830424-72830443 None:intergenic 20.0%
!! ACAGGAAATAATAATAAACA+AGG + chr3_1:72830533-72830552 Msa0373760:CDS 20.0%
!! GTAAAAAAAGGTAAGAATAA+AGG + chr3_1:72830758-72830777 Msa0373760:CDS 20.0%
!!! TTTATTTTGAACCATTTTGT+TGG - chr3_1:72831371-72831390 None:intergenic 20.0%
!!! TTTTCATATAATTGGTTACT+AGG - chr3_1:72832321-72832340 None:intergenic 20.0%
!!! TACAACTGTTTTCATATAAT+TGG - chr3_1:72832329-72832348 None:intergenic 20.0%
!! CTAAAAGATGTTGTATTATA+GGG - chr3_1:72832414-72832433 None:intergenic 20.0%
!! TCTAAAAGATGTTGTATTAT+AGG - chr3_1:72832415-72832434 None:intergenic 20.0%
!!! ATAATACAACATCTTTTAGA+TGG + chr3_1:72832415-72832434 Msa0373760:intron 20.0%
!!! TTTTCTTTTAAGCTTGTTTA+CGG + chr3_1:72833032-72833051 Msa0373760:three_prime_UTR 20.0%
! TATATATACTCAAGGGTTTA+TGG - chr3_1:72827808-72827827 None:intergenic 25.0%
! TAATTTACAATCTGTCTGAT+TGG - chr3_1:72827854-72827873 None:intergenic 25.0%
! AATCAGACAGATTGTAAATT+AGG + chr3_1:72827853-72827872 Msa0373760:five_prime_UTR 25.0%
! ATCAGACAGATTGTAAATTA+GGG + chr3_1:72827854-72827873 Msa0373760:five_prime_UTR 25.0%
! AATCATTATTTGAACAACAG+TGG - chr3_1:72828184-72828203 None:intergenic 25.0%
!!! TATTCGTTTTTGTTTCTGTT+AGG + chr3_1:72828234-72828253 Msa0373760:intron 25.0%
! TTATCACTTATCTGATTCAA+TGG + chr3_1:72828276-72828295 Msa0373760:CDS 25.0%
!! TGAGGTAACAATTTTTCATT+CGG - chr3_1:72828379-72828398 None:intergenic 25.0%
! AATGAAAAATTGTTACCTCA+TGG + chr3_1:72828379-72828398 Msa0373760:CDS 25.0%
! ATTGTGAATAATGCTTTAGT+TGG + chr3_1:72828430-72828449 Msa0373760:CDS 25.0%
! AATATTGAATGTGAAGTAGA+TGG + chr3_1:72828913-72828932 Msa0373760:CDS 25.0%
! TCACATTCAATATGTAAACT+CGG - chr3_1:72829144-72829163 None:intergenic 25.0%
! AAAAGAAGCTGTAAGAAATT+TGG + chr3_1:72829449-72829468 Msa0373760:CDS 25.0%
! TCACATTCAATATGTGAATT+TGG - chr3_1:72829483-72829502 None:intergenic 25.0%
! AAATTCACATATTGAATGTG+AGG + chr3_1:72829482-72829501 Msa0373760:CDS 25.0%
!!! TTATTTCCTGTTTCTTTTGT+TGG - chr3_1:72830524-72830543 None:intergenic 25.0%
! TAAACAAGGTGATATTGAAA+TGG + chr3_1:72830547-72830566 Msa0373760:CDS 25.0%
! AAAAAAGGTAAGAATAAAGG+TGG + chr3_1:72830761-72830780 Msa0373760:CDS 25.0%
!! TTTTCGATTTTCAACAATTG+AGG - chr3_1:72831263-72831282 None:intergenic 25.0%
! TAAGGATTTGGAAAAACAAA+GGG + chr3_1:72831309-72831328 Msa0373760:CDS 25.0%
! ATCAACAGATACATTAATGA+AGG - chr3_1:72831654-72831673 None:intergenic 25.0%
!! TTTTTGTATCAAACTGTATC+AGG + chr3_1:72832028-72832047 Msa0373760:intron 25.0%
! ATGAAAAATGAAACTGAGTA+TGG - chr3_1:72832213-72832232 None:intergenic 25.0%
!! CGTTGATAAATTCTATCAAT+TGG + chr3_1:72832266-72832285 Msa0373760:intron 25.0%
!!! GGTTATTTTTACTTAACTTG+AGG - chr3_1:72832295-72832314 None:intergenic 25.0%
! TTATTTGTATAGAGTGTAGA+TGG - chr3_1:72832371-72832390 None:intergenic 25.0%
!! TACAAATAATTGATGATAGC+AGG - chr3_1:72832537-72832556 None:intergenic 25.0%
! GTTTATTAATTATACCATCG+TGG + chr3_1:72833084-72833103 Msa0373760:three_prime_UTR 25.0%
! TAATAAAAAAAATGCCACGA+TGG - chr3_1:72833101-72833120 None:intergenic 25.0%
GTGTTCGTATATATACTCAA+GGG - chr3_1:72827815-72827834 None:intergenic 30.0%
TTCATGCTTCTTATATGTAG+AGG + chr3_1:72828077-72828096 Msa0373760:intron 30.0%
! ATCTGTATTTGTCCGATTTT+GGG - chr3_1:72828132-72828151 None:intergenic 30.0%
! AATCTGTATTTGTCCGATTT+TGG - chr3_1:72828133-72828152 None:intergenic 30.0%
AATACAGATTCATGGCATTA+AGG + chr3_1:72828143-72828162 Msa0373760:CDS 30.0%
TTCTGTTAGGTTAAACGTAA+TGG + chr3_1:72828247-72828266 Msa0373760:intron 30.0%
! AATAATGCTTTAGTTGGTTC+TGG + chr3_1:72828436-72828455 Msa0373760:CDS 30.0%
TGGAGAATAAGAAAGATAAG+AGG + chr3_1:72828509-72828528 Msa0373760:CDS 30.0%
GGAGAATAAGAAAGATAAGA+GGG + chr3_1:72828510-72828529 Msa0373760:CDS 30.0%
AATAAGAAAGATAAGAGGGA+AGG + chr3_1:72828514-72828533 Msa0373760:CDS 30.0%
! ATTACTGGGTGATAATGATA+CGG + chr3_1:72828612-72828631 Msa0373760:CDS 30.0%
AAAGGATGCTGTCAAAAATT+CGG + chr3_1:72828873-72828892 Msa0373760:CDS 30.0%
AGAAGCTGTGAAAAATTTAG+AGG + chr3_1:72829113-72829132 Msa0373760:CDS 30.0%
CATATTGAATGTGAAGTAGA+TGG + chr3_1:72829150-72829169 Msa0373760:CDS 30.0%
! ATCATCCTTATTTCTTTCAC+TGG - chr3_1:72829178-72829197 None:intergenic 30.0%
AAAGAATAAGAAAGACACTG+TGG + chr3_1:72829263-72829282 Msa0373760:CDS 30.0%
AAGAATAAGAAAGACACTGT+GGG + chr3_1:72829264-72829283 Msa0373760:CDS 30.0%
! ATCCAGTTTCAATGATTTTC+AGG + chr3_1:72829353-72829372 Msa0373760:CDS 30.0%
TACCTGAAAATCATTGAAAC+TGG - chr3_1:72829358-72829377 None:intergenic 30.0%
TAAGAAAAAAGAAGACACTG+TGG + chr3_1:72829611-72829630 Msa0373760:CDS 30.0%
AAGAAAAAAGAAGACACTGT+GGG + chr3_1:72829612-72829631 Msa0373760:CDS 30.0%
! ATCCAGTTTCAACAATTTTC+AGG + chr3_1:72829701-72829720 Msa0373760:CDS 30.0%
TCACATTGAGTATGTGAATT+TGG - chr3_1:72829831-72829850 None:intergenic 30.0%
AAATTCACATACTCAATGTG+AGG + chr3_1:72829830-72829849 Msa0373760:CDS 30.0%
! TTTCTTTCAAAGTGTCATCT+CGG - chr3_1:72829974-72829993 None:intergenic 30.0%
TGCAGATAAAGAAGTGATTA+AGG + chr3_1:72830055-72830074 Msa0373760:CDS 30.0%
!!! GGTAACTGAAGTTTTAAAAG+AGG + chr3_1:72830076-72830095 Msa0373760:CDS 30.0%
TAAAGAAGAAGCCTAAGAAA+AGG + chr3_1:72830180-72830199 Msa0373760:CDS 30.0%
TAATTCTACAGAACCTTTGA+AGG + chr3_1:72830220-72830239 Msa0373760:CDS 30.0%
AATTCTACAGAACCTTTGAA+GGG + chr3_1:72830221-72830240 Msa0373760:CDS 30.0%
TCAAAAGGATGAAACACAAA+CGG + chr3_1:72830256-72830275 Msa0373760:CDS 30.0%
CAAAACGAATCTTGACAAAA+TGG + chr3_1:72830460-72830479 Msa0373760:CDS 30.0%
AATCTTGACAAAATGGAGAT+TGG + chr3_1:72830467-72830486 Msa0373760:CDS 30.0%
TCTTCTAAATCAAACTGAAG+AGG + chr3_1:72830904-72830923 Msa0373760:CDS 30.0%
TAAATCAAACTGAAGAGGAA+GGG + chr3_1:72830909-72830928 Msa0373760:CDS 30.0%
AACATCTAATGCTGAAAATG+TGG + chr3_1:72831036-72831055 Msa0373760:CDS 30.0%
!! GTAGAAGATTGTTTGTTGTT+TGG - chr3_1:72831094-72831113 None:intergenic 30.0%
! ATTTTCAACAATTGAGGACA+TGG - chr3_1:72831257-72831276 None:intergenic 30.0%
GTAAGGATTTGGAAAAACAA+AGG + chr3_1:72831308-72831327 Msa0373760:CDS 30.0%
! TCAAGCTTTGCATTTGAAAT+AGG - chr3_1:72831343-72831362 None:intergenic 30.0%
ATTTCAAATGCAAAGCTTGA+AGG + chr3_1:72831343-72831362 Msa0373760:CDS 30.0%
AATAAAGCAAGAAAAGCTTC+TGG + chr3_1:72831385-72831404 Msa0373760:CDS 30.0%
TTGATTCACAACAAAATGGT+AGG + chr3_1:72831602-72831621 Msa0373760:intron 30.0%
TAATGTATCTGTTGATACAG+TGG + chr3_1:72831658-72831677 Msa0373760:intron 30.0%
AGTGGATGCAAATATTCTTT+GGG + chr3_1:72831676-72831695 Msa0373760:intron 30.0%
! GGACTTACTCAAAAAACTTT+TGG + chr3_1:72831861-72831880 Msa0373760:intron 30.0%
ATCTTGCCTCTTCATAAAAA+TGG + chr3_1:72831969-72831988 Msa0373760:intron 30.0%
!! ACATCACCATTTTTATGAAG+AGG - chr3_1:72831978-72831997 None:intergenic 30.0%
! AAAATGGTGATGTCAAACTT+TGG + chr3_1:72831985-72832004 Msa0373760:intron 30.0%
CAGTTTGATACAAAAAGAGA+GGG - chr3_1:72832024-72832043 None:intergenic 30.0%
ACAGTTTGATACAAAAAGAG+AGG - chr3_1:72832025-72832044 None:intergenic 30.0%
! TTCTTATGATGGGAAAAGAT+TGG + chr3_1:72832051-72832070 Msa0373760:CDS 30.0%
! TTAACTTACCTTGCTTTGAA+GGG - chr3_1:72832094-72832113 None:intergenic 30.0%
ATTAACTTACCTTGCTTTGA+AGG - chr3_1:72832095-72832114 None:intergenic 30.0%
ATATAATTGGTTACTAGGAC+TGG - chr3_1:72832316-72832335 None:intergenic 30.0%
! TACAACATCTTTTAGATGGA+TGG + chr3_1:72832419-72832438 Msa0373760:intron 30.0%
TACATCTCTCACATAATGAT+TGG - chr3_1:72832479-72832498 None:intergenic 30.0%
CTATACATCATTGTAGATGA+TGG + chr3_1:72832690-72832709 Msa0373760:intron 30.0%
!!! TAGATGATGGTTGTTTTTGT+GGG + chr3_1:72832703-72832722 Msa0373760:intron 30.0%
!! CAATTGATGATGTTGTTAGA+AGG + chr3_1:72832839-72832858 Msa0373760:CDS 30.0%
AACTTGTGATTATAGATCAG+AGG - chr3_1:72832936-72832955 None:intergenic 30.0%
GAACAAAAATATCACAATGC+TGG - chr3_1:72832959-72832978 None:intergenic 30.0%
AAGCAAAGATATCACAACTA+CGG - chr3_1:72832983-72833002 None:intergenic 30.0%
AAAGAAAATCAGCACTGTTT+GGG - chr3_1:72833020-72833039 None:intergenic 30.0%
AAAAGAAAATCAGCACTGTT+TGG - chr3_1:72833021-72833040 None:intergenic 30.0%
ATACTCAAGGGTTTATGGTT+TGG - chr3_1:72827803-72827822 None:intergenic 35.0%
CGTGTTCGTATATATACTCA+AGG - chr3_1:72827816-72827835 None:intergenic 35.0%
!!! AGAGAGATTACTTTTGAGGT+CGG - chr3_1:72827999-72828018 None:intergenic 35.0%
!! AGAGAGAGAGATTACTTTTG+AGG - chr3_1:72828003-72828022 None:intergenic 35.0%
CTTTCATGCTTTCCCAAAAT+CGG + chr3_1:72828117-72828136 Msa0373760:CDS 35.0%
ATCGGACAAATACAGATTCA+TGG + chr3_1:72828135-72828154 Msa0373760:CDS 35.0%
!! TAGTGTTGATGTTTCTGCAT+TGG + chr3_1:72828342-72828361 Msa0373760:CDS 35.0%
AATTGCAACTGGGAATTACA+AGG - chr3_1:72828487-72828506 None:intergenic 35.0%
TAATTCCCAGTTGCAATTGT+TGG + chr3_1:72828489-72828508 Msa0373760:CDS 35.0%
ATTCTCCAACAATTGCAACT+GGG - chr3_1:72828497-72828516 None:intergenic 35.0%
TATTCTCCAACAATTGCAAC+TGG - chr3_1:72828498-72828517 None:intergenic 35.0%
CAGTATGTTGAGAAACACAA+GGG - chr3_1:72828555-72828574 None:intergenic 35.0%
GTTTCTCAACATACTGCTAA+AGG + chr3_1:72828559-72828578 Msa0373760:CDS 35.0%
! GAGAATGGTGTCAAATTACT+GGG + chr3_1:72828598-72828617 Msa0373760:CDS 35.0%
TCACATTCCATAGGTAAACT+TGG - chr3_1:72828700-72828719 None:intergenic 35.0%
TCATCTACTTCACATTCCAT+AGG - chr3_1:72828709-72828728 None:intergenic 35.0%
GAAGTAGATGAGCTTGATAA+AGG + chr3_1:72828718-72828737 Msa0373760:CDS 35.0%
TTCTTTCTTCTCTTTGCACT+TGG - chr3_1:72829000-72829019 None:intergenic 35.0%
AAAGAAAAAAGAAGCCACTG+TGG + chr3_1:72829026-72829045 Msa0373760:CDS 35.0%
AGCTGTGAAAAATTTAGAGG+TGG + chr3_1:72829116-72829135 Msa0373760:CDS 35.0%
TGGATCCAGTGAAAGAAATA+AGG + chr3_1:72829170-72829189 Msa0373760:CDS 35.0%
!!! TTGCTTTTTCTCTTTGCACT+TGG - chr3_1:72829237-72829256 None:intergenic 35.0%
ATTGAAACTGGATGTCCTTT+CGG - chr3_1:72829346-72829365 None:intergenic 35.0%
!!! ATTTTCAGGTACCTCAATCA+AGG + chr3_1:72829367-72829386 Msa0373760:CDS 35.0%
! TCTTGTTTGTTCCTTGATTG+AGG - chr3_1:72829381-72829400 None:intergenic 35.0%
AGCTGTAAGAAATTTGGAGA+TGG + chr3_1:72829455-72829474 Msa0373760:CDS 35.0%
GAGGTACATGAATCCAATAA+AGG + chr3_1:72829501-72829520 Msa0373760:CDS 35.0%
!! TGAATCCAATAAAGGCACTA+AGG + chr3_1:72829509-72829528 Msa0373760:CDS 35.0%
! TTCTTCTTTTTCTTCGCACT+TGG - chr3_1:72829576-72829595 None:intergenic 35.0%
AGAAAAAGAAGAAGAGCAAG+AGG + chr3_1:72829583-72829602 Msa0373760:CDS 35.0%
CACCTGAAAATTGTTGAAAC+TGG - chr3_1:72829706-72829725 None:intergenic 35.0%
!! TGGATCAGATAAAGGCATTA+AGG + chr3_1:72829857-72829876 Msa0373760:CDS 35.0%
!! GGATCAGATAAAGGCATTAA+GGG + chr3_1:72829858-72829877 Msa0373760:CDS 35.0%
CTTCTTCTTTGCACTTTGTA+CGG - chr3_1:72829919-72829938 None:intergenic 35.0%
! AGAAGAAGCATAAGAGTGTA+AGG + chr3_1:72829931-72829950 Msa0373760:CDS 35.0%
! TAGAGGAGATTTAAGTTCTG+AGG - chr3_1:72830162-72830181 None:intergenic 35.0%
TTCTTAGGCTTCTTCTTTAG+AGG - chr3_1:72830179-72830198 None:intergenic 35.0%
GGTTCTGTAGAATTATGAGT+CGG - chr3_1:72830215-72830234 None:intergenic 35.0%
AGGTGATACTACTCAGTAAA+TGG + chr3_1:72830313-72830332 Msa0373760:intron 35.0%
GGTGATACTACTCAGTAAAT+GGG + chr3_1:72830314-72830333 Msa0373760:intron 35.0%
AAGTGAAGCTGGTAAAATTG+AGG + chr3_1:72830649-72830668 Msa0373760:CDS 35.0%
AGTGAAGCTGGTAAAATTGA+GGG + chr3_1:72830650-72830669 Msa0373760:CDS 35.0%
! CTATTCACGTCATCATTTTG+TGG - chr3_1:72830698-72830717 None:intergenic 35.0%
! TGATGACGTGAATAGAATGA+AGG + chr3_1:72830703-72830722 Msa0373760:CDS 35.0%
AAAACCAGCAAAGGAACATA+AGG + chr3_1:72830733-72830752 Msa0373760:CDS 35.0%
AAACCAGCAAAGGAACATAA+GGG + chr3_1:72830734-72830753 Msa0373760:CDS 35.0%
GAACATAAGGGGGTAAAAAA+AGG + chr3_1:72830746-72830765 Msa0373760:CDS 35.0%
AAAGGTAAGAATAAAGGTGG+AGG + chr3_1:72830764-72830783 Msa0373760:CDS 35.0%
CATACACTTAGAGCAGATAA+TGG + chr3_1:72830788-72830807 Msa0373760:CDS 35.0%
CTAAATCAAACTGAAGAGGA+AGG + chr3_1:72830908-72830927 Msa0373760:CDS 35.0%
TGTTCTTTCTGTGACTGATA+AGG + chr3_1:72830964-72830983 Msa0373760:CDS 35.0%
GTTCTTTCTGTGACTGATAA+GGG + chr3_1:72830965-72830984 Msa0373760:CDS 35.0%
!!! TGTTGTTTTAGTTTGCTCCA+AGG - chr3_1:72831020-72831039 None:intergenic 35.0%
ACATCAGATATGCTCACAAA+TGG + chr3_1:72831124-72831143 Msa0373760:CDS 35.0%
! TTCTGGGAAAAGTAAGGATT+TGG + chr3_1:72831297-72831316 Msa0373760:CDS 35.0%
! AGCTTCTGGAAATAATGTCA+TGG + chr3_1:72831399-72831418 Msa0373760:CDS 35.0%
!! CAGAAGAAAAGCTTGTTAGA+GGG + chr3_1:72831442-72831461 Msa0373760:CDS 35.0%
!! TTTTGTTGTGAATCAACACC+TGG - chr3_1:72831598-72831617 None:intergenic 35.0%
!! GGTGTTGATTCACAACAAAA+TGG + chr3_1:72831598-72831617 Msa0373760:CDS 35.0%
CAGTGGATGCAAATATTCTT+TGG + chr3_1:72831675-72831694 Msa0373760:intron 35.0%
AAAGATCAGATCTCAGTGAA+TGG - chr3_1:72831783-72831802 None:intergenic 35.0%
ATTCACTGAGATCTGATCTT+TGG + chr3_1:72831782-72831801 Msa0373760:intron 35.0%
! CTCTTCAAACACAAGGTATT+AGG - chr3_1:72831831-72831850 None:intergenic 35.0%
ACTGTATCAGGTTCTTATGA+TGG + chr3_1:72832040-72832059 Msa0373760:intron 35.0%
CTGTATCAGGTTCTTATGAT+GGG + chr3_1:72832041-72832060 Msa0373760:intron 35.0%
ATCTCTCACATAATGATTGG+CGG - chr3_1:72832476-72832495 None:intergenic 35.0%
TTGTGCTCATAGTTATAGCT+TGG + chr3_1:72832510-72832529 Msa0373760:intron 35.0%
TGTGCTCATAGTTATAGCTT+GGG + chr3_1:72832511-72832530 Msa0373760:intron 35.0%
! TATAAATGCTTTTGTCTGCC+TGG + chr3_1:72832636-72832655 Msa0373760:intron 35.0%
! ATAAATGCTTTTGTCTGCCT+GGG + chr3_1:72832637-72832656 Msa0373760:intron 35.0%
!!! GTAGATGATGGTTGTTTTTG+TGG + chr3_1:72832702-72832721 Msa0373760:intron 35.0%
ATGTTGTTAGAAGGTCAACA+AGG + chr3_1:72832848-72832867 Msa0373760:CDS 35.0%
TTCAGTATCATCCAATTGAG+AGG - chr3_1:72832896-72832915 None:intergenic 35.0%
! TTTTTCGTCAACGTTCTTAC+CGG + chr3_1:72833224-72833243 Msa0373760:three_prime_UTR 35.0%
! GTTTGTATCGATGAAGACGA+CGG - chr3_1:72827930-72827949 None:intergenic 40.0%
TACAAACCTCGATACTCACT+TGG + chr3_1:72827943-72827962 Msa0373760:CDS 40.0%
!!! ATTACTTTTGAGGTCGGAGA+CGG - chr3_1:72827993-72828012 None:intergenic 40.0%
!!! GTTGTGAGAAGTGCTTTTCT+TGG + chr3_1:72828298-72828317 Msa0373760:CDS 40.0%
!! TTCTTGGTGTCAACAAAAGC+TGG + chr3_1:72828314-72828333 Msa0373760:CDS 40.0%
!! AATGCTTTAGTTGGTTCTGG+TGG + chr3_1:72828439-72828458 Msa0373760:CDS 40.0%
! GTTCTGGTGGCGATAATAAT+GGG + chr3_1:72828452-72828471 Msa0373760:CDS 40.0%
GCAGTATGTTGAGAAACACA+AGG - chr3_1:72828556-72828575 None:intergenic 40.0%
TCTCAACATACTGCTAAAGG+AGG + chr3_1:72828562-72828581 Msa0373760:CDS 40.0%
! GGAGAATGGTGTCAAATTAC+TGG + chr3_1:72828597-72828616 Msa0373760:CDS 40.0%
TTGGAGTTTGAACCAAGCAA+TGG - chr3_1:72828643-72828662 None:intergenic 40.0%
AGAAGCTCCAAGTTTACCTA+TGG + chr3_1:72828690-72828709 Msa0373760:CDS 40.0%
! AGATGATGATAATGTGGGTG+TGG + chr3_1:72828747-72828766 Msa0373760:CDS 40.0%
AGAGAAAACGGAAGAGTAAG+AGG + chr3_1:72828800-72828819 Msa0373760:CDS 40.0%
TGTTGCAGAGCAGAATGAAA+AGG + chr3_1:72828855-72828874 Msa0373760:CDS 40.0%
TGCTGTCAAAAATTCGGAGA+TGG + chr3_1:72828879-72828898 Msa0373760:CDS 40.0%
! ATCATCCTTATTTCCTCCAC+CGG - chr3_1:72828941-72828960 None:intergenic 40.0%
AAAAAAGAAGCCACTGTGGT+AGG + chr3_1:72829030-72829049 Msa0373760:CDS 40.0%
AAAAAGAAGCCACTGTGGTA+GGG + chr3_1:72829031-72829050 Msa0373760:CDS 40.0%
AATAAGAAAGACACTGTGGG+AGG + chr3_1:72829267-72829286 Msa0373760:CDS 40.0%
CAGTGTTACGTGAAACAAGT+GGG - chr3_1:72829428-72829447 None:intergenic 40.0%
TCAGTGTTACGTGAAACAAG+TGG - chr3_1:72829429-72829448 None:intergenic 40.0%
GTCATCCTTAGTGCCTTTAT+TGG - chr3_1:72829517-72829536 None:intergenic 40.0%
GGATGACTCTATTGTATGTG+AGG + chr3_1:72829530-72829549 Msa0373760:CDS 40.0%
GACTCTATTGTATGTGAGGA+AGG + chr3_1:72829534-72829553 Msa0373760:CDS 40.0%
AAAAAAGAAGACACTGTGGG+AGG + chr3_1:72829615-72829634 Msa0373760:CDS 40.0%
AGAAAAAGCTGCCACACATT+TGG + chr3_1:72829797-72829816 Msa0373760:CDS 40.0%
CATACTCAATGTGAGGTAGA+TGG + chr3_1:72829837-72829856 Msa0373760:CDS 40.0%
GAGGTAGATGGATCAGATAA+AGG + chr3_1:72829849-72829868 Msa0373760:CDS 40.0%
GACTCTATTGTATGCGAGAA+AGG + chr3_1:72829882-72829901 Msa0373760:CDS 40.0%
CTGTTGTTGTACCAGTTAAG+CGG + chr3_1:72830003-72830022 Msa0373760:CDS 40.0%
AGGACAATATTCCGCTTAAC+TGG - chr3_1:72830017-72830036 None:intergenic 40.0%
ATCTGCATTCTCTGCAAAGA+TGG - chr3_1:72830042-72830061 None:intergenic 40.0%
GGTTAATGCTGTGACAATGA+AGG + chr3_1:72830133-72830152 Msa0373760:CDS 40.0%
TAATGCTGTGACAATGAAGG+AGG + chr3_1:72830136-72830155 Msa0373760:CDS 40.0%
! GGAGATCTCTTCCTTTTCTT+AGG - chr3_1:72830194-72830213 None:intergenic 40.0%
GATGATGTATCTCCCTTCAA+AGG - chr3_1:72830236-72830255 None:intergenic 40.0%
GGGAGATACATCATCTCAAA+AGG + chr3_1:72830241-72830260 Msa0373760:CDS 40.0%
TGACAAAATGGAGATTGGAG+CGG + chr3_1:72830472-72830491 Msa0373760:CDS 40.0%
CAGTCTCCAACAAAAGAAAC+AGG + chr3_1:72830515-72830534 Msa0373760:CDS 40.0%
! TGAAATGGAAGTACAGCCTT+CGG + chr3_1:72830562-72830581 Msa0373760:CDS 40.0%
TTATCCTCCATCAGATCCTT+GGG - chr3_1:72830599-72830618 None:intergenic 40.0%
GAGGATAACGAGAATGTTGT+TGG + chr3_1:72830611-72830630 Msa0373760:CDS 40.0%
CATTGTCATGAAAGTGAAGC+TGG + chr3_1:72830638-72830657 Msa0373760:CDS 40.0%
!!! TGTTCCTTTGCTGGTTTTAC+AGG - chr3_1:72830731-72830750 None:intergenic 40.0%
AACCAGCAAAGGAACATAAG+GGG + chr3_1:72830735-72830754 Msa0373760:CDS 40.0%
! TAGAGCAGATAATGGTCTTG+TGG + chr3_1:72830796-72830815 Msa0373760:CDS 40.0%
! ATTTTCCGGAGGATCACAAA+CGG - chr3_1:72830867-72830886 None:intergenic 40.0%
! GAAGGGATGGTAATGTTACA+GGG + chr3_1:72830926-72830945 Msa0373760:CDS 40.0%
! AAGGGATGGTAATGTTACAG+GGG + chr3_1:72830927-72830946 Msa0373760:CDS 40.0%
ATGTTACAGGGGGAAATACA+AGG + chr3_1:72830938-72830957 Msa0373760:CDS 40.0%
TGTTACAGGGGGAAATACAA+GGG + chr3_1:72830939-72830958 Msa0373760:CDS 40.0%
CATATCTGATGTGCTCTTTG+AGG - chr3_1:72831116-72831135 None:intergenic 40.0%
! AAGAAAGAGCGTGATGTACA+CGG + chr3_1:72831163-72831182 Msa0373760:CDS 40.0%
TGATGTACACGGGATTGATA+AGG + chr3_1:72831174-72831193 Msa0373760:CDS 40.0%
! TGTAGAGTCTTGTGAGCATT+TGG - chr3_1:72831202-72831221 None:intergenic 40.0%
AAATATCGCAACAGTGCTTC+TGG + chr3_1:72831280-72831299 Msa0373760:CDS 40.0%
AATATCGCAACAGTGCTTCT+GGG + chr3_1:72831281-72831300 Msa0373760:CDS 40.0%
GCTTGAAGGTTCCAACAAAA+TGG + chr3_1:72831357-72831376 Msa0373760:CDS 40.0%
!! GCAGAAGAAAAGCTTGTTAG+AGG + chr3_1:72831441-72831460 Msa0373760:CDS 40.0%
! GTTAGAGGGAGCAATTTTCA+AGG + chr3_1:72831456-72831475 Msa0373760:CDS 40.0%
TGAAGATGAAGGTCAAGAGA+AGG + chr3_1:72831498-72831517 Msa0373760:CDS 40.0%
GGATGCAAATATTCTTTGGG+TGG + chr3_1:72831679-72831698 Msa0373760:intron 40.0%
GCAAATATTCTTTGGGTGGA+TGG + chr3_1:72831683-72831702 Msa0373760:intron 40.0%
AAAGAAGTCCCTTCAAAGCA+AGG + chr3_1:72832083-72832102 Msa0373760:CDS 40.0%
! TAAATGCTTTTGTCTGCCTG+GGG + chr3_1:72832638-72832657 Msa0373760:intron 40.0%
CATTCTTTGTCCAGTTTGTC+AGG + chr3_1:72832802-72832821 Msa0373760:intron 40.0%
! AAGCTTGTTTACGGATCATG+CGG + chr3_1:72833041-72833060 Msa0373760:three_prime_UTR 40.0%
! CTCAAGGGTTTATGGTTTGG+TGG - chr3_1:72827800-72827819 None:intergenic 45.0%
CTTCGTCAGGTGGAATCTAT+TGG + chr3_1:72828406-72828425 Msa0373760:CDS 45.0%
! GGTTCTGGTGGCGATAATAA+TGG + chr3_1:72828451-72828470 Msa0373760:CDS 45.0%
!! TAAAGGAGGTGTCGCGAATA+TGG + chr3_1:72828576-72828595 Msa0373760:CDS 45.0%
ACGTCTACGATCATCTGTCT+TGG - chr3_1:72828662-72828681 None:intergenic 45.0%
TCTTCAATGTCTGTGCAGAG+TGG + chr3_1:72828775-72828794 Msa0373760:CDS 45.0%
CTTCAATGTCTGTGCAGAGT+GGG + chr3_1:72828776-72828795 Msa0373760:CDS 45.0%
TGCAGAGTGGGAAGAGAAAA+CGG + chr3_1:72828788-72828807 Msa0373760:CDS 45.0%
GAATGTGAAGTAGATGGACC+CGG + chr3_1:72828919-72828938 Msa0373760:CDS 45.0%
! TCATCCTTATTTCCTCCACC+GGG - chr3_1:72828940-72828959 None:intergenic 45.0%
!! CTTGGCACTGATATTGAAGG+TGG - chr3_1:72828982-72829001 None:intergenic 45.0%
!! GCACTTGGCACTGATATTGA+AGG - chr3_1:72828985-72829004 None:intergenic 45.0%
AAAAGAAGCCACTGTGGTAG+GGG + chr3_1:72829032-72829051 Msa0373760:CDS 45.0%
GTAGGGGATGGATCAAAAGA+AGG + chr3_1:72829048-72829067 Msa0373760:CDS 45.0%
AAACACGTGGGTGATCAGAA+GGG - chr3_1:72829077-72829096 None:intergenic 45.0%
GCACTTGGCACAGATATTGA+AGG - chr3_1:72829222-72829241 None:intergenic 45.0%
AAACTGGATGTCCTTTCGGA+TGG - chr3_1:72829342-72829361 None:intergenic 45.0%
TGTTACGTGAAACAAGTGGG+CGG - chr3_1:72829425-72829444 None:intergenic 45.0%
!!! TTTTTCTTCGCACTTGGTGC+GGG - chr3_1:72829570-72829589 None:intergenic 45.0%
!! CTTTTTCTTCGCACTTGGTG+CGG - chr3_1:72829571-72829590 None:intergenic 45.0%
TCTCGACTGTCCATCTGAAA+GGG + chr3_1:72829677-72829696 Msa0373760:CDS 45.0%
AAACTGGATGCCCTTTCAGA+TGG - chr3_1:72829690-72829709 None:intergenic 45.0%
GAACACATGGGCGATCAAAA+AGG - chr3_1:72829767-72829786 None:intergenic 45.0%
!! CTGTATGCTCTGGAACACAT+GGG - chr3_1:72829779-72829798 None:intergenic 45.0%
!! TCTGTATGCTCTGGAACACA+TGG - chr3_1:72829780-72829799 None:intergenic 45.0%
!! GCAGCTTTTTCTGTATGCTC+TGG - chr3_1:72829789-72829808 None:intergenic 45.0%
TGGAACCATCTCCAAATGTG+TGG - chr3_1:72829811-72829830 None:intergenic 45.0%
CATTCTCTGCAAAGATGGCT+AGG - chr3_1:72830037-72830056 None:intergenic 45.0%
CGATAATAACACTGCGAACG+AGG + chr3_1:72830112-72830131 Msa0373760:CDS 45.0%
GATGAAACACAAACGGCTGA+TGG + chr3_1:72830263-72830282 Msa0373760:CDS 45.0%
GAGGGAAGGAAAGAATCAGA+AGG + chr3_1:72830293-72830312 Msa0373760:CDS 45.0%
GTTATCCTCCATCAGATCCT+TGG - chr3_1:72830600-72830619 None:intergenic 45.0%
CTGGTAAAATTGAGGGAGCT+GGG + chr3_1:72830657-72830676 Msa0373760:CDS 45.0%
TGGTAAAATTGAGGGAGCTG+GGG + chr3_1:72830658-72830677 Msa0373760:CDS 45.0%
GGAACCTGTAAAACCAGCAA+AGG + chr3_1:72830724-72830743 Msa0373760:CDS 45.0%
ACCAGCAAAGGAACATAAGG+GGG + chr3_1:72830736-72830755 Msa0373760:CDS 45.0%
AGAAACCGTTTGTGATCCTC+CGG + chr3_1:72830859-72830878 Msa0373760:CDS 45.0%
! TGTGTTGCAACATTTTCCGG+AGG - chr3_1:72830878-72830897 None:intergenic 45.0%
TCCGGAAAATGTTGCAACAC+AGG + chr3_1:72830877-72830896 Msa0373760:CDS 45.0%
! CCCTGTGTTGCAACATTTTC+CGG - chr3_1:72830881-72830900 None:intergenic 45.0%
CCGGAAAATGTTGCAACACA+GGG + chr3_1:72830878-72830897 Msa0373760:CDS 45.0%
TCAAACTGAAGAGGAAGGGA+TGG + chr3_1:72830913-72830932 Msa0373760:CDS 45.0%
! GGAAGGGATGGTAATGTTAC+AGG + chr3_1:72830925-72830944 Msa0373760:CDS 45.0%
! AGGGATGGTAATGTTACAGG+GGG + chr3_1:72830928-72830947 Msa0373760:CDS 45.0%
CTTTCTGTGACTGATAAGGG+AGG + chr3_1:72830968-72830987 Msa0373760:CDS 45.0%
!! TAAGGGAGGTGATTTTAGCG+CGG + chr3_1:72830982-72831001 Msa0373760:CDS 45.0%
! AGAAAGAGCGTGATGTACAC+GGG + chr3_1:72831164-72831183 Msa0373760:CDS 45.0%
! CAGTGCTTCTGGGAAAAGTA+AGG + chr3_1:72831291-72831310 Msa0373760:CDS 45.0%
! AGCAGTTCCTCTGAAGATGA+AGG + chr3_1:72831487-72831506 Msa0373760:CDS 45.0%
CTCTTGACCTTCATCTTCAG+AGG - chr3_1:72831497-72831516 None:intergenic 45.0%
GGTGCAAGTGAATTGTCAGA+TGG - chr3_1:72831553-72831572 None:intergenic 45.0%
TCACTTGCACCCTATTCAGA+CGG + chr3_1:72831562-72831581 Msa0373760:CDS 45.0%
CTGTCATACCCGTCTGAATA+GGG - chr3_1:72831574-72831593 None:intergenic 45.0%
ACTGTCATACCCGTCTGAAT+AGG - chr3_1:72831575-72831594 None:intergenic 45.0%
ATCTCAGTGAATGGCGTGAA+AGG - chr3_1:72831774-72831793 None:intergenic 45.0%
CTTGCAGCTCTTCAAACACA+AGG - chr3_1:72831838-72831857 None:intergenic 45.0%
TGTTTGAAGAGCTGCAAGCA+TGG + chr3_1:72831840-72831859 Msa0373760:intron 45.0%
GCAAGTAGCAGTAGAACTTG+AGG - chr3_1:72832567-72832586 None:intergenic 45.0%
!! TTTTGCTGTGCCTGACAAAC+TGG - chr3_1:72832815-72832834 None:intergenic 45.0%
CAATTGAGAGGCTGTCATTC+TGG - chr3_1:72832884-72832903 None:intergenic 45.0%
CAGAATGACAGCCTCTCAAT+TGG + chr3_1:72832882-72832901 Msa0373760:CDS 45.0%
TGATTATAGATCAGAGGCCC+TGG - chr3_1:72832930-72832949 None:intergenic 45.0%
! ATCAGCACTGTTTGGGATGA+AGG - chr3_1:72833013-72833032 None:intergenic 45.0%
! TGAGAGCCAAGTGAGTATCG+AGG - chr3_1:72827952-72827971 None:intergenic 50.0%
ACCTCATGGTTCACTTCGTC+AGG + chr3_1:72828393-72828412 Msa0373760:CDS 50.0%
ACCTGACGAAGTGAACCATG+AGG - chr3_1:72828397-72828416 None:intergenic 50.0%
TCATGGTTCACTTCGTCAGG+TGG + chr3_1:72828396-72828415 Msa0373760:CDS 50.0%
! GGTGTCGCGAATATGGAGAA+TGG + chr3_1:72828583-72828602 Msa0373760:CDS 50.0%
GATACGGCGATTCCATTGCT+TGG + chr3_1:72828628-72828647 Msa0373760:CDS 50.0%
AACACGCAGACGATCAGAAG+GGG - chr3_1:72828839-72828858 None:intergenic 50.0%
CAACACGCAGACGATCAGAA+GGG - chr3_1:72828840-72828859 None:intergenic 50.0%
GAAACACGTGGGTGATCAGA+AGG - chr3_1:72829078-72829097 None:intergenic 50.0%
!! CAGTGTGCTCTGAAACACGT+GGG - chr3_1:72829089-72829108 None:intergenic 50.0%
!! TCAGTGTGCTCTGAAACACG+TGG - chr3_1:72829090-72829109 None:intergenic 50.0%
CTTTCGGATGGACAAACGAC+AGG - chr3_1:72829330-72829349 None:intergenic 50.0%
! CTGTCGTTTGTCCATCCGAA+AGG + chr3_1:72829328-72829347 Msa0373760:CDS 50.0%
AAACAAGTGGGCGGTCAAAG+GGG - chr3_1:72829416-72829435 None:intergenic 50.0%
GAAACAAGTGGGCGGTCAAA+GGG - chr3_1:72829417-72829436 None:intergenic 50.0%
TGAAACAAGTGGGCGGTCAA+AGG - chr3_1:72829418-72829437 None:intergenic 50.0%
CTTTCAGATGGACAGTCGAG+AGG - chr3_1:72829678-72829697 None:intergenic 50.0%
CTCTCGACTGTCCATCTGAA+AGG + chr3_1:72829676-72829695 Msa0373760:CDS 50.0%
AGCTGCCACACATTTGGAGA+TGG + chr3_1:72829803-72829822 Msa0373760:CDS 50.0%
TTGGGCTCATTCACATCCGA+AGG - chr3_1:72830581-72830600 None:intergenic 50.0%
TTCGGATGTGAATGAGCCCA+AGG + chr3_1:72830580-72830599 Msa0373760:CDS 50.0%
GAATGAGCCCAAGGATCTGA+TGG + chr3_1:72830589-72830608 Msa0373760:CDS 50.0%
GCTGGTAAAATTGAGGGAGC+TGG + chr3_1:72830656-72830675 Msa0373760:CDS 50.0%
AAAATTGAGGGAGCTGGGGA+AGG + chr3_1:72830662-72830681 Msa0373760:CDS 50.0%
ACCCCCTTATGTTCCTTTGC+TGG - chr3_1:72830740-72830759 None:intergenic 50.0%
! GTCAGATGGAGTTCTAGTGC+TGG - chr3_1:72831539-72831558 None:intergenic 50.0%
CACTTGCACCCTATTCAGAC+GGG + chr3_1:72831563-72831582 Msa0373760:CDS 50.0%
TACTGAAGTTCCAGAGAGCC+AGG + chr3_1:72832909-72832928 Msa0373760:CDS 50.0%
ACTGAAGTTCCAGAGAGCCA+GGG + chr3_1:72832910-72832929 Msa0373760:CDS 50.0%
TGCGTAAGCAGTGTGCGAGA+TGG + chr3_1:72827880-72827899 Msa0373760:exon 55.0%
! ACGGTGCCGGAGTCAGAAAT+CGG - chr3_1:72827911-72827930 None:intergenic 55.0%
ATCGATGAAGACGACGGTGC+CGG - chr3_1:72827924-72827943 None:intergenic 55.0%
GACGGTATCGTGATCGGAGA+CGG - chr3_1:72827975-72827994 None:intergenic 55.0%
GTCGGAGACGGTATCGTGAT+CGG - chr3_1:72827981-72828000 None:intergenic 55.0%
GCAACACGCAGACGATCAGA+AGG - chr3_1:72828841-72828860 None:intergenic 55.0%
TGTGAAGTAGATGGACCCGG+TGG + chr3_1:72828922-72828941 Msa0373760:CDS 55.0%
TGGACCCGGTGGAGGAAATA+AGG + chr3_1:72828933-72828952 Msa0373760:CDS 55.0%
TGATCCATCCCCTACCACAG+TGG - chr3_1:72829043-72829062 None:intergenic 55.0%
TGAGCCCAAGGATCTGATGG+AGG + chr3_1:72830592-72830611 Msa0373760:CDS 55.0%
!! CGCGGACAATGCTGATTCCT+TGG + chr3_1:72831000-72831019 Msa0373760:CDS 55.0%
GAGGACATGGCGCTGTTAGA+CGG - chr3_1:72831244-72831263 None:intergenic 55.0%
TCAGACGGGTATGACAGTCC+AGG + chr3_1:72831577-72831596 Msa0373760:CDS 55.0%
AGCAACAACAAGCATGCCCC+AGG - chr3_1:72832657-72832676 None:intergenic 55.0%
! GTCAACGTTCTTACCGGCTG+AGG + chr3_1:72833230-72833249 Msa0373760:three_prime_UTR 55.0%
!! GCGACGCCGATTTCTGACTC+CGG + chr3_1:72827902-72827921 Msa0373760:CDS 60.0%
GAAGTAGATGGACCCGGTGG+AGG + chr3_1:72828925-72828944 Msa0373760:CDS 60.0%
GAAGCCACTGTGGTAGGGGA+TGG + chr3_1:72829036-72829055 Msa0373760:CDS 60.0%
AACGGCTGATGGAGCTCACG+AGG + chr3_1:72830274-72830293 Msa0373760:CDS 60.0%
ACGGCTGATGGAGCTCACGA+GGG + chr3_1:72830275-72830294 Msa0373760:CDS 60.0%
CTGATGGAGCTCACGAGGGA+AGG + chr3_1:72830279-72830298 Msa0373760:CDS 60.0%
! GATCAGAGGCCCTGGCTCTC+TGG - chr3_1:72832922-72832941 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 72827775 72833261 72827775 ID=Msa0373760;Name=Msa0373760
chr3_1 mRNA 72827775 72833261 72827775 ID=Msa0373760-mRNA-1;Parent=Msa0373760;Name=Msa0373760-mRNA-1;_AED=0.04;_eAED=0.04;_QI=124|1|1|1|1|1|6|322|1195
chr3_1 exon 72827775 72828007 72827775 ID=Msa0373760-mRNA-1:exon:16417;Parent=Msa0373760-mRNA-1
chr3_1 exon 72828097 72828164 72828097 ID=Msa0373760-mRNA-1:exon:16418;Parent=Msa0373760-mRNA-1
chr3_1 exon 72828256 72830314 72828256 ID=Msa0373760-mRNA-1:exon:16419;Parent=Msa0373760-mRNA-1
chr3_1 exon 72830447 72831619 72830447 ID=Msa0373760-mRNA-1:exon:16420;Parent=Msa0373760-mRNA-1
chr3_1 exon 72832050 72832104 72832050 ID=Msa0373760-mRNA-1:exon:16421;Parent=Msa0373760-mRNA-1
chr3_1 exon 72832816 72833261 72832816 ID=Msa0373760-mRNA-1:exon:16422;Parent=Msa0373760-mRNA-1
chr3_1 five_prime_UTR 72827775 72827898 72827775 ID=Msa0373760-mRNA-1:five_prime_utr;Parent=Msa0373760-mRNA-1
chr3_1 CDS 72827899 72828007 72827899 ID=Msa0373760-mRNA-1:cds;Parent=Msa0373760-mRNA-1
chr3_1 CDS 72828097 72828164 72828097 ID=Msa0373760-mRNA-1:cds;Parent=Msa0373760-mRNA-1
chr3_1 CDS 72828256 72830314 72828256 ID=Msa0373760-mRNA-1:cds;Parent=Msa0373760-mRNA-1
chr3_1 CDS 72830447 72831619 72830447 ID=Msa0373760-mRNA-1:cds;Parent=Msa0373760-mRNA-1
chr3_1 CDS 72832050 72832104 72832050 ID=Msa0373760-mRNA-1:cds;Parent=Msa0373760-mRNA-1
chr3_1 CDS 72832816 72832939 72832816 ID=Msa0373760-mRNA-1:cds;Parent=Msa0373760-mRNA-1
chr3_1 three_prime_UTR 72832940 72833261 72832940 ID=Msa0373760-mRNA-1:three_prime_utr;Parent=Msa0373760-mRNA-1
Gene Sequence

>Msa0373760

ATGGCGACGCCGATTTCTGACTCCGGCACCGTCGTCTTCATCGATACAAACCTCGATACTCACTTGGCTCTCACCGTCTCCGATCACGATACCGTCTCCGACCTCAAAAAGGTAATCGTTTCTGAACATCTTTCATGCTTTCCCAAAATCGGACAAATACAGATTCATGGCATTAAGGTTAAACGTAATGGTCACTTTTATCACTTATCTGATTCAATGGTTGTGAGAAGTGCTTTTCTTGGTGTCAACAAAAGCTGGTTTCTTAGTGTTGATGTTTCTGCATTGGAAGATTCTAGACCGAATGAAAAATTGTTACCTCATGGTTCACTTCGTCAGGTGGAATCTATTGGCATTGTGAATAATGCTTTAGTTGGTTCTGGTGGCGATAATAATGGGATTATTTTGCCTTGTAATTCCCAGTTGCAATTGTTGGAGAATAAGAAAGATAAGAGGGAAGGTGTTCGTGTTGTTAGCCCTTGTGTTTCTCAACATACTGCTAAAGGAGGTGTCGCGAATATGGAGAATGGTGTCAAATTACTGGGTGATAATGATACGGCGATTCCATTGCTTGGTTCAAACTCCAAGACAGATGATCGTAGACGTTTGAATAAAGAAGCTCCAAGTTTACCTATGGAATGTGAAGTAGATGAGCTTGATAAAGGAAATAAAGATGATGATAATGTGGGTGTGGAAGAATCTTCAATGTCTGTGCAGAGTGGGAAGAGAAAACGGAAGAGTAAGAGGAAAAGAGAAGAAACCCCTTCTGATCGTCTGCGTGTTGCAGAGCAGAATGAAAAGGATGCTGTCAAAAATTCGGAGATGGTTCCAAGTTTAAATATTGAATGTGAAGTAGATGGACCCGGTGGAGGAAATAAGGATGATCATAATGTGTGTGAAGAACCACCTTCAATATCAGTGCCAAGTGCAAAGAGAAGAAAGAAGAGTACAAAGAAAAAAGAAGCCACTGTGGTAGGGGATGGATCAAAAGAAGGAATCCCTTCTGATCACCCACGTGTTTCAGAGCACACTGAAAAAGAAGCTGTGAAAAATTTAGAGGTGGTTCCGAGTTTACATATTGAATGTGAAGTAGATGGATCCAGTGAAAGAAATAAGGATGATCGTAATGTGTGTGAAGAAGTGCCTTCAATATCTGTGCCAAGTGCAAAGAGAAAAAGCAAGAGTAAAAAGAATAAGAAAGACACTGTGGGAGGTGATAATTCGAAAGATAACATTGCTGCTGTTGATAATCCTGTCGTTTGTCCATCCGAAAGGACATCCAGTTTCAATGATTTTCAGGTACCTCAATCAAGGAACAAACAAGATGACAAAGAAGTCCCCTTTGACCGCCCACTTGTTTCACGTAACACTGAAAAAGAAGCTGTAAGAAATTTGGAGATGGTTCCAAATTCACATATTGAATGTGAGGTACATGAATCCAATAAAGGCACTAAGGATGACTCTATTGTATGTGAGGAAGGAACTTCTGAACCCGCACCAAGTGCGAAGAAAAAGAAGAAGAGCAAGAGGAAGAGTAAGAAAAAAGAAGACACTGTGGGAGGTGATATCTCAAAAGACAACATTGTTTCTGTTGATAATCCTCTCGACTGTCCATCTGAAAGGGCATCCAGTTTCAACAATTTTCAGGTGTCTCAATCAAAGAATAAAAAAGATGAAAAAAAAGAAATCCTTTTTGATCGCCCATGTGTTCCAGAGCATACAGAAAAAGCTGCCACACATTTGGAGATGGTTCCAAATTCACATACTCAATGTGAGGTAGATGGATCAGATAAAGGCATTAAGGGCGACTCTATTGTATGCGAGAAAGGAACTTCTAAATCCGTACAAAGTGCAAAGAAGAAGCATAAGAGTGTAAGGAAAAAAGAAGACACAGTCCGAGATGACACTTTGAAAGAAAGCGACGCATCTGTTGTTGTACCAGTTAAGCGGAATATTGTCCTAGCCATCTTTGCAGAGAATGCAGATAAAGAAGTGATTAAGGTAACTGAAGTTTTAAAAGAGGACAATGAAAGCAACGATAATAACACTGCGAACGAGGTTAATGCTGTGACAATGAAGGAGGCCTCAGAACTTAAATCTCCTCTAAAGAAGAAGCCTAAGAAAAGGAAGAGATCTCCGACTCATAATTCTACAGAACCTTTGAAGGGAGATACATCATCTCAAAAGGATGAAACACAAACGGCTGATGGAGCTCACGAGGGAAGGAAAGAATCAGAAGATATCATCATTAACAAAACGAATCTTGACAAAATGGAGATTGGAGCGGTTGCATACAAAGAAAGCATACAGTCTCCAACAAAAGAAACAGGAAATAATAATAAACAAGGTGATATTGAAATGGAAGTACAGCCTTCGGATGTGAATGAGCCCAAGGATCTGATGGAGGATAACGAGAATGTTGTTGGTAGTCATTGTCATGAAAGTGAAGCTGGTAAAATTGAGGGAGCTGGGGAAGGAGAAGTATCACCACAAAATGATGACGTGAATAGAATGAAGGAACCTGTAAAACCAGCAAAGGAACATAAGGGGGTAAAAAAAGGTAAGAATAAAGGTGGAGGACATACACTTAGAGCAGATAATGGTCTTGTGGATGCTTCTGAGAGTGAAACTGTTGTTGCGAAGTCTCTTAAAGAAACCGTTTGTGATCCTCCGGAAAATGTTGCAACACAGGGAAGTCTTCTAAATCAAACTGAAGAGGAAGGGATGGTAATGTTACAGGGGGAAATACAAGGGACTGTTCTTTCTGTGACTGATAAGGGAGGTGATTTTAGCGCGGACAATGCTGATTCCTTGGAGCAAACTAAAACAACATCTAATGCTGAAAATGTGGATGAACTTGTAAGTAAGAGACTGAAAAAGAAACCAAACAACAAACAATCTTCTACCTCAAAGAGCACATCAGATATGCTCACAAATGGTCATGTTTTTGATAGTAAGAAAGAGCGTGATGTACACGGGATTGATAAGGCACCAAATGCTCACAAGACTCTACAAGCTACAAAATTTTCTAGTCCGTCTAACAGCGCCATGTCCTCAATTGTTGAAAATCGAAAATATCGCAACAGTGCTTCTGGGAAAAGTAAGGATTTGGAAAAACAAAGGGAACACATTCCTATTTCAAATGCAAAGCTTGAAGGTTCCAACAAAATGGTTCAAAATAAAGCAAGAAAAGCTTCTGGAAATAATGTCATGGAAGTTGTGAGTAAATCACAGCAGAAGAAAAGCTTGTTAGAGGGAGCAATTTTCAAGGATGATAGTAGCAGTTCCTCTGAAGATGAAGGTCAAGAGAAGGTTGATAATTCTGATGCCAGCACTAGAACTCCATCTGACAATTCACTTGCACCCTATTCAGACGGGTATGACAGTCCAGGTGTTGATTCACAACAAAATGGTTCTTATGATGGGAAAAGATTGGAAAATGATGAAAGAAGTCCCTTCAAAGCAAGTTTGTCAGGCACAGCAAAAATGTCAATTGATGATGTTGTTAGAAGGTCAACAAGGTATAAGCAAGCCAGAATGACAGCCTCTCAATTGGATGATACTGAAGTTCCAGAGAGCCAGGGCCTCTGA
Protein sequence

>Msa0373760

MATPISDSGTVVFIDTNLDTHLALTVSDHDTVSDLKKVIVSEHLSCFPKIGQIQIHGIKVKRNGHFYHLSDSMVVRSAFLGVNKSWFLSVDVSALEDSRPNEKLLPHGSLRQVESIGIVNNALVGSGGDNNGIILPCNSQLQLLENKKDKREGVRVVSPCVSQHTAKGGVANMENGVKLLGDNDTAIPLLGSNSKTDDRRRLNKEAPSLPMECEVDELDKGNKDDDNVGVEESSMSVQSGKRKRKSKRKREETPSDRLRVAEQNEKDAVKNSEMVPSLNIECEVDGPGGGNKDDHNVCEEPPSISVPSAKRRKKSTKKKEATVVGDGSKEGIPSDHPRVSEHTEKEAVKNLEVVPSLHIECEVDGSSERNKDDRNVCEEVPSISVPSAKRKSKSKKNKKDTVGGDNSKDNIAAVDNPVVCPSERTSSFNDFQVPQSRNKQDDKEVPFDRPLVSRNTEKEAVRNLEMVPNSHIECEVHESNKGTKDDSIVCEEGTSEPAPSAKKKKKSKRKSKKKEDTVGGDISKDNIVSVDNPLDCPSERASSFNNFQVSQSKNKKDEKKEILFDRPCVPEHTEKAATHLEMVPNSHTQCEVDGSDKGIKGDSIVCEKGTSKSVQSAKKKHKSVRKKEDTVRDDTLKESDASVVVPVKRNIVLAIFAENADKEVIKVTEVLKEDNESNDNNTANEVNAVTMKEASELKSPLKKKPKKRKRSPTHNSTEPLKGDTSSQKDETQTADGAHEGRKESEDIIINKTNLDKMEIGAVAYKESIQSPTKETGNNNKQGDIEMEVQPSDVNEPKDLMEDNENVVGSHCHESEAGKIEGAGEGEVSPQNDDVNRMKEPVKPAKEHKGVKKGKNKGGGHTLRADNGLVDASESETVVAKSLKETVCDPPENVATQGSLLNQTEEEGMVMLQGEIQGTVLSVTDKGGDFSADNADSLEQTKTTSNAENVDELVSKRLKKKPNNKQSSTSKSTSDMLTNGHVFDSKKERDVHGIDKAPNAHKTLQATKFSSPSNSAMSSIVENRKYRNSASGKSKDLEKQREHIPISNAKLEGSNKMVQNKARKASGNNVMEVVSKSQQKKSLLEGAIFKDDSSSSSEDEGQEKVDNSDASTRTPSDNSLAPYSDGYDSPGVDSQQNGSYDGKRLENDERSPFKASLSGTAKMSIDDVVRRSTRYKQARMTASQLDDTEVPESQGL*