AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0378650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378650 MtrunA17_Chr3g0131691 94.929 493 11 7 1 488 1 484 0.0 935
Msa0378650 MtrunA17_Chr7g0252041 67.138 283 67 7 220 487 203 474 8.26e-104 318
Msa0378650 MtrunA17_Chr3g0141091 43.333 210 91 5 277 486 153 334 5.48e-37 139
Msa0378650 MtrunA17_Chr5g0411541 46.000 200 86 4 290 486 142 322 3.05e-36 136
Msa0378650 MtrunA17_Chr1g0211081 35.749 207 106 5 296 480 312 513 4.96e-32 128
Msa0378650 MtrunA17_Chr8g0365711 30.918 207 135 4 273 479 217 415 4.97e-23 101
Msa0378650 MtrunA17_Chr3g0089131 62.069 58 22 0 404 461 5 62 3.42e-20 85.1
Msa0378650 MtrunA17_Chr1g0185621 34.184 196 117 5 292 478 461 653 2.11e-18 88.2
Msa0378650 MtrunA17_Chr2g0298751 31.638 177 114 4 297 468 48 222 4.65e-18 83.6
Msa0378650 MtrunA17_Chr2g0320291 30.508 177 105 4 268 439 95 258 2.94e-16 79.7
Msa0378650 MtrunA17_Chr4g0052821 29.500 200 126 5 288 480 277 468 9.61e-16 79.7
Msa0378650 MtrunA17_Chr7g0225901 28.177 181 114 3 280 457 67 234 3.42e-15 75.5
Msa0378650 MtrunA17_Chr3g0089121 44.444 81 40 2 330 410 1 76 4.50e-15 71.2
Msa0378650 MtrunA17_Chr3g0135471 65.116 43 15 0 419 461 1 43 5.97e-15 69.7
Msa0378650 MtrunA17_Chr4g0052841 28.500 200 129 6 288 480 278 470 1.37e-14 75.9
Msa0378650 MtrunA17_Chr4g0054581 27.439 164 113 3 278 440 174 332 3.17e-14 74.3
Msa0378650 MtrunA17_Chr4g0028071 30.464 151 88 3 292 438 140 277 4.23e-14 73.6
Msa0378650 MtrunA17_Chr2g0318461 62.791 43 16 0 419 461 1 43 4.55e-14 67.0
Msa0378650 MtrunA17_Chr6g0468491 28.804 184 120 3 302 484 138 311 4.77e-14 73.2
Msa0378650 MtrunA17_Chr8g0346151 32.911 158 98 4 299 455 277 427 5.41e-14 73.9
Msa0378650 MtrunA17_Chr7g0275821 52.239 67 32 0 299 365 250 316 5.51e-14 73.9
Msa0378650 MtrunA17_Chr2g0280161 27.879 165 110 2 302 466 178 333 6.60e-14 73.2
Msa0378650 MtrunA17_Chr8g0346161 58.182 55 23 0 299 353 289 343 6.68e-14 73.9
Msa0378650 MtrunA17_Chr4g0049331 27.607 163 108 3 295 457 129 281 7.75e-14 72.4
Msa0378650 MtrunA17_Chr4g0033391 27.979 193 125 3 283 474 128 307 8.91e-14 72.4
Msa0378650 MtrunA17_Chr8g0386921 33.333 159 84 4 302 441 407 562 9.46e-14 73.6
Msa0378650 MtrunA17_Chr5g0411341 29.851 201 108 6 299 483 491 674 1.08e-13 73.6
Msa0378650 MtrunA17_Chr4g0002801 28.512 242 139 8 256 479 105 330 1.14e-13 72.0
Msa0378650 MtrunA17_Chr5g0400661 28.814 177 113 5 291 457 135 308 1.95e-13 71.2
Msa0378650 MtrunA17_Chr4g0033291 27.660 188 123 2 287 474 141 315 5.06e-13 70.1
Msa0378650 MtrunA17_Chr8g0366751 34.615 156 97 3 299 451 460 613 5.98e-13 71.2
Msa0378650 MtrunA17_Chr7g0260841 53.448 58 27 0 299 356 353 410 1.92e-12 69.3
Msa0378650 MtrunA17_Chr4g0054571 28.902 173 107 4 271 440 127 286 4.29e-12 67.4
Msa0378650 MtrunA17_Chr2g0307131 28.177 181 104 5 302 474 180 342 8.03e-12 66.6
Msa0378650 MtrunA17_Chr5g0400671 27.429 175 107 5 301 469 154 314 9.38e-12 66.2
Msa0378650 MtrunA17_Chr2g0333621 27.919 197 123 6 256 442 83 270 1.49e-11 65.5
Msa0378650 MtrunA17_Chr3g0089111 43.529 85 32 2 262 330 141 225 2.39e-11 63.5
Msa0378650 MtrunA17_Chr2g0333611 25.786 159 100 4 302 457 46 189 8.56e-11 62.0
Msa0378650 MtrunA17_Chr0c01g0489461 29.651 172 98 6 302 451 197 367 8.70e-11 63.9
Msa0378650 MtrunA17_Chr4g0033281 26.697 221 146 5 268 486 119 325 9.26e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378650 AT3G26744.1 57.071 396 134 7 116 488 112 494 6.02e-133 394
Msa0378650 AT3G26744.4 57.071 396 134 7 116 488 112 494 6.02e-133 394
Msa0378650 AT3G26744.2 57.071 396 134 7 116 488 112 494 6.02e-133 394
Msa0378650 AT1G12860.1 68.707 294 66 5 200 488 178 450 1.59e-122 366
Msa0378650 AT3G26744.6 56.369 369 125 7 116 461 112 467 6.92e-117 352
Msa0378650 AT1G12860.2 68.914 267 57 5 200 461 178 423 4.81e-107 325
Msa0378650 AT5G65640.1 42.411 224 114 6 263 486 140 348 3.52e-36 137
Msa0378650 AT5G10570.1 43.077 195 83 4 294 486 144 312 1.35e-32 127
Msa0378650 AT2G16910.1 39.378 193 104 3 300 480 313 504 3.91e-31 127
Msa0378650 AT3G26744.5 39.535 258 111 8 116 341 112 356 4.07e-31 124
Msa0378650 AT1G12860.3 55.474 137 41 3 200 332 178 298 4.68e-27 111
Msa0378650 AT5G65640.2 62.500 88 32 1 270 356 146 233 1.58e-20 92.0
Msa0378650 AT5G57150.1 32.571 175 107 4 300 469 53 221 1.11e-16 80.1
Msa0378650 AT2G28160.1 29.121 182 119 2 257 438 89 260 4.62e-16 79.7
Msa0378650 AT2G28160.2 29.121 182 119 2 257 438 89 260 6.02e-16 79.0
Msa0378650 AT5G57150.3 33.544 158 94 4 300 452 54 205 1.29e-15 76.3
Msa0378650 AT2G46510.1 42.857 98 48 1 267 356 353 450 1.39e-15 79.7
Msa0378650 AT5G57150.2 33.544 158 94 4 300 452 54 205 1.43e-15 76.3
Msa0378650 AT5G57150.5 33.544 158 94 4 300 452 53 204 1.50e-15 76.3
Msa0378650 AT5G46760.1 32.124 193 111 7 299 485 413 591 5.31e-15 78.2
Msa0378650 AT5G57150.4 33.544 158 94 4 300 452 54 205 8.08e-15 75.1
Msa0378650 AT4G29930.2 29.412 153 90 3 300 452 53 187 1.08e-14 73.9
Msa0378650 AT4G29930.6 28.758 153 94 1 300 452 53 190 1.81e-14 73.2
Msa0378650 AT4G29930.5 29.412 153 90 3 300 452 53 187 2.04e-14 73.2
Msa0378650 AT4G29930.4 47.761 67 35 0 300 366 53 119 2.28e-14 72.0
Msa0378650 AT1G63650.3 30.822 146 93 2 304 441 408 553 4.10e-14 75.1
Msa0378650 AT1G63650.1 30.822 146 93 2 304 441 408 553 4.10e-14 75.1
Msa0378650 AT1G63650.2 30.822 146 93 2 304 441 408 553 4.10e-14 75.1
Msa0378650 AT4G17880.1 29.630 189 113 7 299 483 414 586 4.55e-14 75.1
Msa0378650 AT4G29930.1 47.761 67 35 0 300 366 53 119 4.71e-14 72.4
Msa0378650 AT4G29930.3 47.761 67 35 0 300 366 53 119 5.87e-14 72.4
Msa0378650 AT4G29930.7 47.761 67 35 0 300 366 53 119 5.87e-14 72.4
Msa0378650 AT1G32640.1 31.183 186 115 6 299 483 450 623 1.74e-13 73.2
Msa0378650 AT4G09820.1 34.437 151 66 5 294 441 353 473 2.01e-13 72.8
Msa0378650 AT1G01260.1 41.000 100 47 2 271 358 391 490 3.51e-13 72.4
Msa0378650 AT1G01260.2 41.000 100 47 2 271 358 391 490 3.51e-13 72.4
Msa0378650 AT1G01260.3 41.000 100 47 2 271 358 391 490 3.51e-13 72.4
Msa0378650 AT4G00870.1 47.761 67 33 1 294 358 240 306 5.22e-13 71.2
Msa0378650 AT4G16430.1 34.921 126 67 4 259 369 265 390 3.59e-12 68.9
Msa0378650 AT4G37850.2 27.841 176 110 4 290 457 133 299 4.41e-12 67.8
Msa0378650 AT4G37850.1 27.841 176 110 4 290 457 133 299 4.41e-12 67.8
Msa0378650 AT4G21330.1 31.343 201 112 6 288 480 19 201 2.37e-11 63.5
Msa0378650 AT1G10610.3 43.243 74 37 1 290 358 151 224 3.19e-11 65.1
Msa0378650 AT1G10610.2 43.243 74 37 1 290 358 218 291 4.14e-11 65.1
Msa0378650 AT1G10610.1 43.243 74 37 1 290 358 248 321 5.39e-11 65.1
Msa0378650 AT5G46830.1 29.348 184 110 7 299 479 341 507 5.78e-11 65.1

Find 126 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGATTCTTTGCCTTCTTC+TGG 0.160215 3_1:-79493133 Msa0378650:CDS
AGTCTTACTTTGCTAATCTT+TGG 0.234140 3_1:+79492785 None:intergenic
ACAATTCAAGTGTGTGATAT+TGG 0.260773 3_1:-79491140 Msa0378650:three_prime_UTR
GTAGTAGTAGCAGCTGTTAA+TGG 0.262851 3_1:+79493253 None:intergenic
ATGGATAGGGCTTCAATTCT+TGG 0.273781 3_1:-79492483 Msa0378650:CDS
ATTGGGGCTTGGCAATGAGC+TGG 0.280404 3_1:+79492296 None:intergenic
AGGAAGGTCAAAAGGGTTAA+TGG 0.287266 3_1:+79493363 None:intergenic
ACCCTGGCAGGTTGGCCATT+GGG 0.297219 3_1:+79492279 None:intergenic
GCAGGTTGGCCATTGGGGCT+TGG 0.306907 3_1:+79492285 None:intergenic
CAGAACTCTCAAGAGGGTTC+TGG 0.318137 3_1:-79493178 Msa0378650:CDS
TTTGACCTTCCTTGTGAACT+TGG 0.319070 3_1:-79493352 Msa0378650:CDS
GTTGTTGTTGTCTGTTGTTA+TGG 0.320112 3_1:+79493650 None:intergenic
GTTGTCTGTTGTTATGGTTA+TGG 0.324297 3_1:+79493656 None:intergenic
TTGGGGCTTGGCAATGAGCT+GGG 0.337234 3_1:+79492297 None:intergenic
AAAGCAGATGAAGGAGTGTT+TGG 0.350468 3_1:+79493682 None:intergenic
ACCGACACCATCTTCGTTGC+CGG 0.353485 3_1:-79492343 Msa0378650:CDS
AGTAAAACATTGTCTAAGTT+AGG 0.362524 3_1:+79493526 None:intergenic
GCCCCAATGGCCAACCTGCC+AGG 0.363430 3_1:-79492281 Msa0378650:CDS
CATTGTTGATTTGAGGCAAA+TGG 0.366809 3_1:+79493215 None:intergenic
TTGGATTCAGCTGGCTTCAA+TGG 0.366974 3_1:-79491270 Msa0378650:CDS
CAATGACCTTCATAATGAAT+TGG 0.368740 3_1:-79492421 Msa0378650:CDS
GGAAGGTCAAAAGGGTTAAT+GGG 0.370616 3_1:+79493364 None:intergenic
TACCCTGGCAGGTTGGCCAT+TGG 0.374681 3_1:+79492278 None:intergenic
ATAGGTTGAGGTTCGGTTGC+GGG 0.376470 3_1:-79491696 Msa0378650:intron
TCAAATCAACAATGCCTTCA+TGG 0.376926 3_1:-79493206 Msa0378650:CDS
TGGATAGGGCTTCAATTCTT+GGG 0.384697 3_1:-79492482 Msa0378650:CDS
GCTGTTATAAGTTGTTTCAA+TGG 0.387308 3_1:-79491572 Msa0378650:CDS
GCTCTCAACCATGAGGGCTT+TGG 0.392480 3_1:-79491621 Msa0378650:CDS
GATGGTGTTGGTGTTGGTTG+AGG 0.406586 3_1:+79493433 None:intergenic
AGTACTGCTTTGATTTGCTC+TGG 0.407438 3_1:+79491294 None:intergenic
GAGCAACAGACCAGGTTTGC+GGG 0.411720 3_1:+79491640 None:intergenic
GCTAAGTTGACTGTTTGAAA+TGG 0.422288 3_1:+79491202 None:intergenic
AAGCAGATGAAGGAGTGTTT+GGG 0.422902 3_1:+79493683 None:intergenic
AGGTTCGGTTGCGGGAAGGA+AGG 0.424401 3_1:-79491688 Msa0378650:CDS
AGTTCACAAGGAAGGTCAAA+AGG 0.426484 3_1:+79493355 None:intergenic
CCCTGGCAGGTTGGCCATTG+GGG 0.427011 3_1:+79492280 None:intergenic
GTAAAACATTGTCTAAGTTA+GGG 0.430732 3_1:+79493527 None:intergenic
TATCATTGAGCTTCTTTCTC+CGG 0.430910 3_1:+79492834 None:intergenic
TTGATTCCAATTCATTATGA+AGG 0.432938 3_1:+79492415 None:intergenic
GGATGCAATTGAGTATCTTA+AGG 0.435858 3_1:-79492460 Msa0378650:CDS
GCAAATCAAAGCAGTACTCT+TGG 0.442590 3_1:-79491289 Msa0378650:CDS
ATTGTTGATTTGAGGCAAAT+GGG 0.443835 3_1:+79493216 None:intergenic
GGCATAGTTCTTCTTTGATA+CGG 0.452108 3_1:+79492319 None:intergenic
ATGAAGGCATTGTTGATTTG+AGG 0.454958 3_1:+79493208 None:intergenic
GAATTGGATGGTGTTGGTGT+TGG 0.455965 3_1:+79493427 None:intergenic
TTGTTTCAATGGATTTGCTA+TGG 0.459665 3_1:-79491561 Msa0378650:CDS
GTTGTTCATTCTGGACATCA+TGG 0.460958 3_1:+79493759 None:intergenic
GTACTGAAGATGGTTGGAAT+TGG 0.462423 3_1:+79493411 None:intergenic
CAAATCAACAATGCCTTCAT+GGG 0.462470 3_1:-79493205 Msa0378650:CDS
TCTTTCATCAAACCCATGCT+TGG 0.473324 3_1:-79493607 Msa0378650:CDS
CTGCTTTGATTTGCTCTGGA+TGG 0.474350 3_1:+79491298 None:intergenic
TTTGGTTTGATAGATGGATA+GGG 0.478288 3_1:-79492496 Msa0378650:intron
AGAAGAAACGGAATCATTGA+TGG 0.481195 3_1:+79493498 None:intergenic
ATGAAGAAGGGTGTTGAAAA+CGG 0.485213 3_1:+79493456 None:intergenic
GTGAAGGGAGTGATAAGAAA+AGG 0.488278 3_1:-79493045 Msa0378650:CDS
AATGCCTGCTAAGAATTTGA+TGG 0.488400 3_1:-79492867 Msa0378650:CDS
ATTTGATGGCTGAACGTCGC+CGG 0.489938 3_1:-79492853 Msa0378650:CDS
TGGGGCTTGGCAATGAGCTG+GGG 0.491361 3_1:+79492298 None:intergenic
TTCATCGATTTCACCAAGCA+TGG 0.492487 3_1:+79493594 None:intergenic
GAAGATGGTGTCGGTGTCAA+AGG 0.493431 3_1:+79492351 None:intergenic
GGTTCGGTTGCGGGAAGGAA+GGG 0.497387 3_1:-79491687 Msa0378650:CDS
TATAGGTTGAGGTTCGGTTG+CGG 0.498455 3_1:-79491697 Msa0378650:intron
ATGAGGGCTTTGGATAACCT+TGG 0.500549 3_1:-79491611 Msa0378650:CDS
TCAGCCATCAAATTCTTAGC+AGG 0.502459 3_1:+79492863 None:intergenic
GAATTGGAATCAACACCTGC+TGG 0.507793 3_1:-79492405 Msa0378650:CDS
GCAGTACTCTTGGATTCAGC+TGG 0.509971 3_1:-79491279 Msa0378650:CDS
AGGTGAACATGAAGAAGAAA+CGG 0.512576 3_1:+79493486 None:intergenic
GTAGGTTGTGTTCCAGAAGA+AGG 0.513634 3_1:+79493121 None:intergenic
AGAGCAACAGACCAGGTTTG+CGG 0.518682 3_1:+79491639 None:intergenic
AACATGGGCAAGTGTGAGAT+TGG 0.523086 3_1:-79493067 Msa0378650:CDS
GATCAGAAAGGGAAGAAGAA+AGG 0.526869 3_1:-79492890 Msa0378650:CDS
AATATTGGAAATGGTTCCAA+TGG 0.527417 3_1:-79492929 Msa0378650:CDS
ATGAAAGTACTGAAGATGGT+TGG 0.528381 3_1:+79493405 None:intergenic
TCGATGAAGACGATGAAGAA+TGG 0.531477 3_1:-79493579 Msa0378650:CDS
AAAGGATGGAAGCTTGAAGC+AGG 0.532982 3_1:+79492369 None:intergenic
AGTTCTTCTTTGATACGGCC+CGG 0.536230 3_1:+79492324 None:intergenic
AGTGACAGTGCTATTACCAT+TGG 0.536538 3_1:+79492913 None:intergenic
AGCTCATTGCCAAGCCCCAA+TGG 0.538619 3_1:-79492294 Msa0378650:CDS
ATACGGCCCGGCAACGAAGA+TGG 0.543485 3_1:+79492336 None:intergenic
CCCCAATGGCCAACCTGCCA+GGG 0.545849 3_1:-79492280 Msa0378650:intron
CCGACACCATCTTCGTTGCC+GGG 0.547698 3_1:-79492342 Msa0378650:CDS
GCACTGTCACTGATCAGAAA+GGG 0.548791 3_1:-79492901 Msa0378650:CDS
TCATCGATTTCACCAAGCAT+GGG 0.552156 3_1:+79493595 None:intergenic
GTTCACAAGGAAGGTCAAAA+GGG 0.555011 3_1:+79493356 None:intergenic
GAGGATGAAAGTACTGAAGA+TGG 0.555381 3_1:+79493401 None:intergenic
ACAAACAACATTACCCTGGC+AGG 0.556920 3_1:+79492267 None:intergenic
CAACAACAACAATGGTTGGA+TGG 0.558143 3_1:-79493737 Msa0378650:CDS
AGCACTGTCACTGATCAGAA+AGG 0.561565 3_1:-79492902 Msa0378650:CDS
GATGATTTGACTGAGAGTAA+TGG 0.561773 3_1:-79492956 Msa0378650:CDS
AAGGTTATCCAAAGCCCTCA+TGG 0.562752 3_1:+79491613 None:intergenic
ATGGTGTCGGTGTCAAAGGA+TGG 0.562953 3_1:+79492355 None:intergenic
TTTGCTAATCTTTGGAACAA+CGG 0.562953 3_1:+79492793 None:intergenic
GTCTGTTGCTCTCAACCATG+AGG 0.567620 3_1:-79491628 Msa0378650:CDS
GAAAACCAAGTTCACAAGGA+AGG 0.585921 3_1:+79493347 None:intergenic
GGATAGGGCTTCAATTCTTG+GGG 0.587204 3_1:-79492481 Msa0378650:CDS
GTGTTGGTTGAGGATGAAGA+AGG 0.588266 3_1:+79493443 None:intergenic
TTATGGATGAAAGCAGATGA+AGG 0.593844 3_1:+79493673 None:intergenic
TTGTTGATTTGAGGCAAATG+GGG 0.597247 3_1:+79493217 None:intergenic
GTTGAGGTTCGGTTGCGGGA+AGG 0.597960 3_1:-79491692 Msa0378650:CDS
TCTGTTGCTCTCAACCATGA+GGG 0.601025 3_1:-79491627 Msa0378650:CDS
CTTGCTGAATGTCTAATCCA+AGG 0.601261 3_1:+79491594 None:intergenic
ATGGTTGAGAGCAACAGACC+AGG 0.602316 3_1:+79491632 None:intergenic
AAGAAAAGGAAGTTCAGTGG+TGG 0.603486 3_1:-79493031 Msa0378650:CDS
GATAAGAAAAGGAAGTTCAG+TGG 0.603790 3_1:-79493034 Msa0378650:CDS
AGAGTTCTGAAACCCCATGA+AGG 0.606271 3_1:+79493192 None:intergenic
ACAACATTACCCTGGCAGGT+TGG 0.610361 3_1:+79492271 None:intergenic
TAAAACATTGTCTAAGTTAG+GGG 0.610771 3_1:+79493528 None:intergenic
TGTTGGTTGAGGATGAAGAA+GGG 0.614214 3_1:+79493444 None:intergenic
ATCTTAAGGAACTTCTGCAA+AGG 0.617257 3_1:-79492446 Msa0378650:CDS
GGGGTTTCAGAACTCTCAAG+AGG 0.618750 3_1:-79493185 Msa0378650:CDS
GGCAAGTGTGAGATTGGTGA+AGG 0.621318 3_1:-79493061 Msa0378650:CDS
TGATCATCAAGCTTCAGCAA+TGG 0.624760 3_1:-79493323 Msa0378650:CDS
GGTGTTAGTGAAGATCCAGC+AGG 0.626615 3_1:+79492390 None:intergenic
TGAAGATGGTTGGAATTGGA+TGG 0.631496 3_1:+79493415 None:intergenic
ATGATAGACTCTATATGCTG+AGG 0.634746 3_1:-79492817 Msa0378650:CDS
TGGTTGGAATTGGATGGTGT+TGG 0.635315 3_1:+79493421 None:intergenic
GTGTTGAAAACGGAGGAAGA+AGG 0.636871 3_1:+79493466 None:intergenic
TCAAGAAAACCAAGTTCACA+AGG 0.642271 3_1:+79493343 None:intergenic
AAGAAGGGTGTTGAAAACGG+AGG 0.649568 3_1:+79493459 None:intergenic
AAATCAACAATGCCTTCATG+GGG 0.651364 3_1:-79493204 Msa0378650:CDS
GGGTTTCAGAACTCTCAAGA+GGG 0.655642 3_1:-79493184 Msa0378650:CDS
GAAGAAGGCAAAGAATCAAG+TGG 0.655817 3_1:+79493136 None:intergenic
CCCGGCAACGAAGATGGTGT+CGG 0.657605 3_1:+79492342 None:intergenic
GTTTGCGGGTACAAAACATG+TGG 0.680602 3_1:+79491654 None:intergenic
GCAAGTGTGAGATTGGTGAA+GGG 0.684813 3_1:-79493060 Msa0378650:CDS
TTCAGAAAAGAGCAGCACTG+AGG 0.741898 3_1:-79493093 Msa0378650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATATTGAAATTAAAG+AGG + chr3_1:79492151-79492170 None:intergenic 10.0%
!! TCAAAATCTACATTAAAATA+TGG - chr3_1:79492900-79492919 Msa0378650:CDS 15.0%
!!! GTTATTTTCATTTTTTGTAT+AGG - chr3_1:79493181-79493200 Msa0378650:CDS 15.0%
!! AATGGAAAAAATATTGGAAA+TGG - chr3_1:79491957-79491976 Msa0378650:intron 20.0%
!! AACATAAGCATTAATCAAAA+AGG + chr3_1:79492204-79492223 None:intergenic 20.0%
!!! AGATTGATAATATGTCTTAA+AGG - chr3_1:79492314-79492333 Msa0378650:CDS 20.0%
!!! ATTTTACAATCAAGATTAGA+CGG - chr3_1:79492842-79492861 Msa0378650:CDS 20.0%
!! TTGTTTATTTATTGTGATTG+AGG - chr3_1:79493518-79493537 Msa0378650:CDS 20.0%
! TAAAACATTGTCTAAGTTAG+GGG + chr3_1:79491370-79491389 None:intergenic 25.0%
! GTAAAACATTGTCTAAGTTA+GGG + chr3_1:79491371-79491390 None:intergenic 25.0%
! AGTAAAACATTGTCTAAGTT+AGG + chr3_1:79491372-79491391 None:intergenic 25.0%
!!! TTAATGGGTTTTTGATTTTG+AGG + chr3_1:79491519-79491538 None:intergenic 25.0%
!!! ATTGATGATTTGAGTTTTGA+TGG - chr3_1:79491894-79491913 Msa0378650:intron 25.0%
!!! TTGATGATTTGAGTTTTGAT+GGG - chr3_1:79491895-79491914 Msa0378650:intron 25.0%
!! GAGAGTAATGGAAAAAATAT+TGG - chr3_1:79491951-79491970 Msa0378650:intron 25.0%
!!! ATGTTTTTTGGTTTGATAGA+TGG - chr3_1:79492393-79492412 Msa0378650:CDS 25.0%
! TTGATTCCAATTCATTATGA+AGG + chr3_1:79492483-79492502 None:intergenic 25.0%
! ATTCCTAAAACTAGAAATAG+TGG - chr3_1:79492720-79492739 Msa0378650:intron 25.0%
! TTGTAAAATTCAAATGTAGC+TGG + chr3_1:79492831-79492850 None:intergenic 25.0%
!!! TCTTATGATTGTTATTTACC+CGG - chr3_1:79493065-79493084 Msa0378650:CDS 25.0%
!!! TTCATTTTTTGTATAGGTTG+AGG - chr3_1:79493187-79493206 Msa0378650:CDS 25.0%
!! TTTAACTTAGTATCTTGCTA+AGG - chr3_1:79493397-79493416 Msa0378650:CDS 25.0%
! TTAACTTAGTATCTTGCTAA+GGG - chr3_1:79493398-79493417 Msa0378650:CDS 25.0%
ATGAACAACAACAACAACAA+TGG - chr3_1:79491150-79491169 Msa0378650:three_prime_UTR 30.0%
! AATGGCTACTTCTTCTTTTA+TGG - chr3_1:79491590-79491609 Msa0378650:CDS 30.0%
! ATGGCTACTTCTTCTTTTAT+GGG - chr3_1:79491591-79491610 Msa0378650:CDS 30.0%
!! ATTGTTGATTTGAGGCAAAT+GGG + chr3_1:79491682-79491701 None:intergenic 30.0%
AATATTGGAAATGGTTCCAA+TGG - chr3_1:79491966-79491985 Msa0378650:intron 30.0%
!! TTTGCTAATCTTTGGAACAA+CGG + chr3_1:79492105-79492124 None:intergenic 30.0%
AGTCTTACTTTGCTAATCTT+TGG + chr3_1:79492113-79492132 None:intergenic 30.0%
ATTTGATCTGAGTCATTGTT+AGG - chr3_1:79492250-79492269 Msa0378650:intron 30.0%
TTTGATCTGAGTCATTGTTA+GGG - chr3_1:79492251-79492270 Msa0378650:intron 30.0%
AGTCATTGTTAGGGTAATAA+GGG - chr3_1:79492260-79492279 Msa0378650:intron 30.0%
TAAGGGTTAAGGACTAATTA+TGG - chr3_1:79492277-79492296 Msa0378650:intron 30.0%
! TGTTGTTTAGTTTCTGTGAT+TGG - chr3_1:79492346-79492365 Msa0378650:CDS 30.0%
!!! GGATTCTATGACATGTTTTT+TGG - chr3_1:79492381-79492400 Msa0378650:CDS 30.0%
!!! TTTTGGTTTGATAGATGGAT+AGG - chr3_1:79492398-79492417 Msa0378650:CDS 30.0%
!! TTTGGTTTGATAGATGGATA+GGG - chr3_1:79492399-79492418 Msa0378650:CDS 30.0%
CAATGACCTTCATAATGAAT+TGG - chr3_1:79492474-79492493 Msa0378650:CDS 30.0%
TGAGCAAATATCTAAGCAAA+AGG + chr3_1:79492675-79492694 None:intergenic 30.0%
!!! ACACCACTATTTCTAGTTTT+AGG + chr3_1:79492726-79492745 None:intergenic 30.0%
!! ACTTTAAAGCACACAAACAA+AGG + chr3_1:79492996-79493015 None:intergenic 30.0%
AAGATTGATAAATCTAGACC+GGG + chr3_1:79493086-79493105 None:intergenic 30.0%
CAAGATTGATAAATCTAGAC+CGG + chr3_1:79493087-79493106 None:intergenic 30.0%
! TATCAATCTTGGTTTGACAT+AGG - chr3_1:79493096-79493115 Msa0378650:CDS 30.0%
!! TTTTTGTATAGGTTGAGGTT+CGG - chr3_1:79493192-79493211 Msa0378650:CDS 30.0%
! GCTGTTATAAGTTGTTTCAA+TGG - chr3_1:79493323-79493342 Msa0378650:CDS 30.0%
!! TTGTTTCAATGGATTTGCTA+TGG - chr3_1:79493334-79493353 Msa0378650:CDS 30.0%
CATTCAATACTTTCTGCATT+TGG - chr3_1:79493426-79493445 Msa0378650:CDS 30.0%
! TTCTGCATTTGGTAATCAAA+AGG - chr3_1:79493437-79493456 Msa0378650:CDS 30.0%
TTATTGTGATTGAGGTGTAA+AGG - chr3_1:79493526-79493545 Msa0378650:CDS 30.0%
ACAATTCAAGTGTGTGATAT+TGG - chr3_1:79493755-79493774 Msa0378650:CDS 30.0%
! GTTGTTGTTGTTGTTCATTC+TGG + chr3_1:79491148-79491167 None:intergenic 35.0%
ACAACAACAACAACAATGGT+TGG - chr3_1:79491154-79491173 Msa0378650:three_prime_UTR 35.0%
TTATGGATGAAAGCAGATGA+AGG + chr3_1:79491225-79491244 None:intergenic 35.0%
GTTGTCTGTTGTTATGGTTA+TGG + chr3_1:79491242-79491261 None:intergenic 35.0%
! GTTGTTGTTGTCTGTTGTTA+TGG + chr3_1:79491248-79491267 None:intergenic 35.0%
AGAAGAAACGGAATCATTGA+TGG + chr3_1:79491400-79491419 None:intergenic 35.0%
AGGTGAACATGAAGAAGAAA+CGG + chr3_1:79491412-79491431 None:intergenic 35.0%
!! ATGAAGAAGGGTGTTGAAAA+CGG + chr3_1:79491442-79491461 None:intergenic 35.0%
!! ATGAAAGTACTGAAGATGGT+TGG + chr3_1:79491493-79491512 None:intergenic 35.0%
!!! ATGGGTTTTTGATTTTGAGG+AGG + chr3_1:79491516-79491535 None:intergenic 35.0%
TCAAGAAAACCAAGTTCACA+AGG + chr3_1:79491555-79491574 None:intergenic 35.0%
!! TTGTTGATTTGAGGCAAATG+GGG + chr3_1:79491681-79491700 None:intergenic 35.0%
!! CATTGTTGATTTGAGGCAAA+TGG + chr3_1:79491683-79491702 None:intergenic 35.0%
!! ATGAAGGCATTGTTGATTTG+AGG + chr3_1:79491690-79491709 None:intergenic 35.0%
TCAAATCAACAATGCCTTCA+TGG - chr3_1:79491689-79491708 Msa0378650:CDS 35.0%
CAAATCAACAATGCCTTCAT+GGG - chr3_1:79491690-79491709 Msa0378650:CDS 35.0%
AAATCAACAATGCCTTCATG+GGG - chr3_1:79491691-79491710 Msa0378650:CDS 35.0%
GATAAGAAAAGGAAGTTCAG+TGG - chr3_1:79491861-79491880 Msa0378650:intron 35.0%
GATGATTTGACTGAGAGTAA+TGG - chr3_1:79491939-79491958 Msa0378650:intron 35.0%
AATGCCTGCTAAGAATTTGA+TGG - chr3_1:79492028-79492047 Msa0378650:intron 35.0%
TATCATTGAGCTTCTTTCTC+CGG + chr3_1:79492064-79492083 None:intergenic 35.0%
ATGATAGACTCTATATGCTG+AGG - chr3_1:79492078-79492097 Msa0378650:intron 35.0%
GAGTCATTGTTAGGGTAATA+AGG - chr3_1:79492259-79492278 Msa0378650:intron 35.0%
TGTTAGGGTAATAAGGGTTA+AGG - chr3_1:79492266-79492285 Msa0378650:intron 35.0%
! TGTTTAGTTTCTGTGATTGG+TGG - chr3_1:79492349-79492368 Msa0378650:CDS 35.0%
GGATGCAATTGAGTATCTTA+AGG - chr3_1:79492435-79492454 Msa0378650:CDS 35.0%
ATCTTAAGGAACTTCTGCAA+AGG - chr3_1:79492449-79492468 Msa0378650:CDS 35.0%
GGCATAGTTCTTCTTTGATA+CGG + chr3_1:79492579-79492598 None:intergenic 35.0%
ACAAACAAACAACATTACCC+TGG + chr3_1:79492635-79492654 None:intergenic 35.0%
!! ACTGAACTTCTGCTTGTTTT+AGG - chr3_1:79493019-79493038 Msa0378650:CDS 35.0%
!!! CTGAACTTCTGCTTGTTTTA+GGG - chr3_1:79493020-79493039 Msa0378650:CDS 35.0%
CGGTCTAGATTTATCAATCT+TGG - chr3_1:79493085-79493104 Msa0378650:CDS 35.0%
! TATGGATATTTTCAGAGCTG+AGG - chr3_1:79493352-79493371 Msa0378650:CDS 35.0%
TTGCTGTAAAAGAAGAAAGG+AGG + chr3_1:79493557-79493576 None:intergenic 35.0%
GCATTGCTGTAAAAGAAGAA+AGG + chr3_1:79493560-79493579 None:intergenic 35.0%
! CTTTTACAGCAATGCAAAGA+AGG - chr3_1:79493565-79493584 Msa0378650:CDS 35.0%
! GCTAAGTTGACTGTTTGAAA+TGG + chr3_1:79493696-79493715 None:intergenic 35.0%
CAACAACAACAATGGTTGGA+TGG - chr3_1:79491158-79491177 Msa0378650:three_prime_UTR 40.0%
!! AAGCAGATGAAGGAGTGTTT+GGG + chr3_1:79491215-79491234 None:intergenic 40.0%
!! AAAGCAGATGAAGGAGTGTT+TGG + chr3_1:79491216-79491235 None:intergenic 40.0%
TCTTTCATCAAACCCATGCT+TGG - chr3_1:79491288-79491307 Msa0378650:CDS 40.0%
!! TCATCGATTTCACCAAGCAT+GGG + chr3_1:79491303-79491322 None:intergenic 40.0%
!! TTCATCGATTTCACCAAGCA+TGG + chr3_1:79491304-79491323 None:intergenic 40.0%
TCGATGAAGACGATGAAGAA+TGG - chr3_1:79491316-79491335 Msa0378650:CDS 40.0%
! TGTTGGTTGAGGATGAAGAA+GGG + chr3_1:79491454-79491473 None:intergenic 40.0%
TGAAGATGGTTGGAATTGGA+TGG + chr3_1:79491483-79491502 None:intergenic 40.0%
GTACTGAAGATGGTTGGAAT+TGG + chr3_1:79491487-79491506 None:intergenic 40.0%
!! GAGGATGAAAGTACTGAAGA+TGG + chr3_1:79491497-79491516 None:intergenic 40.0%
GGAAGGTCAAAAGGGTTAAT+GGG + chr3_1:79491534-79491553 None:intergenic 40.0%
AGGAAGGTCAAAAGGGTTAA+TGG + chr3_1:79491535-79491554 None:intergenic 40.0%
GTTCACAAGGAAGGTCAAAA+GGG + chr3_1:79491542-79491561 None:intergenic 40.0%
AGTTCACAAGGAAGGTCAAA+AGG + chr3_1:79491543-79491562 None:intergenic 40.0%
TTTGACCTTCCTTGTGAACT+TGG - chr3_1:79491543-79491562 Msa0378650:intron 40.0%
GAAAACCAAGTTCACAAGGA+AGG + chr3_1:79491551-79491570 None:intergenic 40.0%
TGATCATCAAGCTTCAGCAA+TGG - chr3_1:79491572-79491591 Msa0378650:CDS 40.0%
GTAGTAGTAGCAGCTGTTAA+TGG + chr3_1:79491645-79491664 None:intergenic 40.0%
!!! CTGGAAAGTCACTGTTTTTG+AGG - chr3_1:79491736-79491755 Msa0378650:intron 40.0%
GAAGAAGGCAAAGAATCAAG+TGG + chr3_1:79491762-79491781 None:intergenic 40.0%
CTTGATTCTTTGCCTTCTTC+TGG - chr3_1:79491762-79491781 Msa0378650:intron 40.0%
!!! GCTCTTTTCTGAAACAGAGT+AGG + chr3_1:79491795-79491814 None:intergenic 40.0%
GTGAAGGGAGTGATAAGAAA+AGG - chr3_1:79491850-79491869 Msa0378650:intron 40.0%
AAGAAAAGGAAGTTCAGTGG+TGG - chr3_1:79491864-79491883 Msa0378650:intron 40.0%
!! GATTTGAGTTTTGATGGGTC+TGG - chr3_1:79491900-79491919 Msa0378650:intron 40.0%
! AGTGACAGTGCTATTACCAT+TGG + chr3_1:79491985-79492004 None:intergenic 40.0%
GATCAGAAAGGGAAGAAGAA+AGG - chr3_1:79492005-79492024 Msa0378650:intron 40.0%
TCAGCCATCAAATTCTTAGC+AGG + chr3_1:79492035-79492054 None:intergenic 40.0%
TTAGTTTCTGTGATTGGTGG+TGG - chr3_1:79492352-79492371 Msa0378650:CDS 40.0%
ATGGATAGGGCTTCAATTCT+TGG - chr3_1:79492412-79492431 Msa0378650:CDS 40.0%
TGGATAGGGCTTCAATTCTT+GGG - chr3_1:79492413-79492432 Msa0378650:CDS 40.0%
GTTGTTTGTTTGTCCAATGC+TGG - chr3_1:79492642-79492661 Msa0378650:intron 40.0%
AAAAGGACAAGTTCCAGCAT+TGG + chr3_1:79492658-79492677 None:intergenic 40.0%
!!! AACTTCTGCTTGTTTTAGGG+TGG - chr3_1:79493023-79493042 Msa0378650:CDS 40.0%
!!! TGCTTGTTTTAGGGTGGAAA+TGG - chr3_1:79493029-79493048 Msa0378650:CDS 40.0%
CTTGCTGAATGTCTAATCCA+AGG + chr3_1:79493304-79493323 None:intergenic 40.0%
!! AGTACTGCTTTGATTTGCTC+TGG + chr3_1:79493604-79493623 None:intergenic 40.0%
GCAAATCAAAGCAGTACTCT+TGG - chr3_1:79493606-79493625 Msa0378650:CDS 40.0%
GTGTTGAAAACGGAGGAAGA+AGG + chr3_1:79491432-79491451 None:intergenic 45.0%
!! AAGAAGGGTGTTGAAAACGG+AGG + chr3_1:79491439-79491458 None:intergenic 45.0%
!! GTGTTGGTTGAGGATGAAGA+AGG + chr3_1:79491455-79491474 None:intergenic 45.0%
!! GAATTGGATGGTGTTGGTGT+TGG + chr3_1:79491471-79491490 None:intergenic 45.0%
TGGTTGGAATTGGATGGTGT+TGG + chr3_1:79491477-79491496 None:intergenic 45.0%
!! AGAGTTCTGAAACCCCATGA+AGG + chr3_1:79491706-79491725 None:intergenic 45.0%
GGGTTTCAGAACTCTCAAGA+GGG - chr3_1:79491711-79491730 Msa0378650:intron 45.0%
GTAGGTTGTGTTCCAGAAGA+AGG + chr3_1:79491777-79491796 None:intergenic 45.0%
TTCAGAAAAGAGCAGCACTG+AGG - chr3_1:79491802-79491821 Msa0378650:intron 45.0%
! AGCAGCACTGAGGAAAAACA+TGG - chr3_1:79491812-79491831 Msa0378650:intron 45.0%
! GCAGCACTGAGGAAAAACAT+GGG - chr3_1:79491813-79491832 Msa0378650:intron 45.0%
AACATGGGCAAGTGTGAGAT+TGG - chr3_1:79491828-79491847 Msa0378650:intron 45.0%
GCAAGTGTGAGATTGGTGAA+GGG - chr3_1:79491835-79491854 Msa0378650:intron 45.0%
AGCACTGTCACTGATCAGAA+AGG - chr3_1:79491993-79492012 Msa0378650:intron 45.0%
GCACTGTCACTGATCAGAAA+GGG - chr3_1:79491994-79492013 Msa0378650:intron 45.0%
GGATAGGGCTTCAATTCTTG+GGG - chr3_1:79492414-79492433 Msa0378650:CDS 45.0%
GAATTGGAATCAACACCTGC+TGG - chr3_1:79492490-79492509 Msa0378650:intron 45.0%
AAAGGATGGAAGCTTGAAGC+AGG + chr3_1:79492529-79492548 None:intergenic 45.0%
AGTTCTTCTTTGATACGGCC+CGG + chr3_1:79492574-79492593 None:intergenic 45.0%
ACAAACAACATTACCCTGGC+AGG + chr3_1:79492631-79492650 None:intergenic 45.0%
AGCAAACTTGCCTGTGGATA+TGG - chr3_1:79492767-79492786 Msa0378650:intron 45.0%
GCAAACTTGCCTGTGGATAT+GGG - chr3_1:79492768-79492787 Msa0378650:intron 45.0%
CAAACTTGCCTGTGGATATG+GGG - chr3_1:79492769-79492788 Msa0378650:intron 45.0%
AAACTTGCCTGTGGATATGG+GGG - chr3_1:79492770-79492789 Msa0378650:intron 45.0%
CTGGAACGTACGATCAAGAT+TGG + chr3_1:79492931-79492950 None:intergenic 45.0%
TTGATCGTACGTTCCAGATG+TGG - chr3_1:79492934-79492953 Msa0378650:CDS 45.0%
! TATAGGTTGAGGTTCGGTTG+CGG - chr3_1:79493198-79493217 Msa0378650:CDS 45.0%
GTTTGCGGGTACAAAACATG+TGG + chr3_1:79493244-79493263 None:intergenic 45.0%
! ATGTTTTGTACCCGCAAACC+TGG - chr3_1:79493245-79493264 Msa0378650:CDS 45.0%
TCTGTTGCTCTCAACCATGA+GGG - chr3_1:79493268-79493287 Msa0378650:CDS 45.0%
AAGGTTATCCAAAGCCCTCA+TGG + chr3_1:79493285-79493304 None:intergenic 45.0%
!! ATGAGGGCTTTGGATAACCT+TGG - chr3_1:79493284-79493303 Msa0378650:CDS 45.0%
!! CTGCTTTGATTTGCTCTGGA+TGG + chr3_1:79493600-79493619 None:intergenic 45.0%
! TTGGATTCAGCTGGCTTCAA+TGG - chr3_1:79493625-79493644 Msa0378650:CDS 45.0%
!! GATGGTGTTGGTGTTGGTTG+AGG + chr3_1:79491465-79491484 None:intergenic 50.0%
GGGGTTTCAGAACTCTCAAG+AGG - chr3_1:79491710-79491729 Msa0378650:intron 50.0%
CAGAACTCTCAAGAGGGTTC+TGG - chr3_1:79491717-79491736 Msa0378650:intron 50.0%
GGCAAGTGTGAGATTGGTGA+AGG - chr3_1:79491834-79491853 Msa0378650:intron 50.0%
! ATTTGATGGCTGAACGTCGC+CGG - chr3_1:79492042-79492061 Msa0378650:intron 50.0%
!! TGTGATTGGTGGTGGATCTG+AGG - chr3_1:79492360-79492379 Msa0378650:CDS 50.0%
GGTGTTAGTGAAGATCCAGC+AGG + chr3_1:79492508-79492527 None:intergenic 50.0%
!! ATGGTGTCGGTGTCAAAGGA+TGG + chr3_1:79492543-79492562 None:intergenic 50.0%
!! GAAGATGGTGTCGGTGTCAA+AGG + chr3_1:79492547-79492566 None:intergenic 50.0%
ACAACATTACCCTGGCAGGT+TGG + chr3_1:79492627-79492646 None:intergenic 50.0%
ACAGCTAGCAAACTTGCCTG+TGG - chr3_1:79492761-79492780 Msa0378650:intron 50.0%
AACACAACCCCCATATCCAC+AGG + chr3_1:79492780-79492799 None:intergenic 50.0%
CTGGTTGCATACAGTCACAG+AGG + chr3_1:79492812-79492831 None:intergenic 50.0%
TACACGCACTTAGCCACATC+TGG + chr3_1:79492950-79492969 None:intergenic 50.0%
! ATAGGTTGAGGTTCGGTTGC+GGG - chr3_1:79493199-79493218 Msa0378650:CDS 50.0%
AGAGCAACAGACCAGGTTTG+CGG + chr3_1:79493259-79493278 None:intergenic 50.0%
ATGGTTGAGAGCAACAGACC+AGG + chr3_1:79493266-79493285 None:intergenic 50.0%
GTCTGTTGCTCTCAACCATG+AGG - chr3_1:79493267-79493286 Msa0378650:CDS 50.0%
GCAGTACTCTTGGATTCAGC+TGG - chr3_1:79493616-79493635 Msa0378650:CDS 50.0%
ACCGACACCATCTTCGTTGC+CGG - chr3_1:79492552-79492571 Msa0378650:intron 55.0%
TTGGGGCTTGGCAATGAGCT+GGG + chr3_1:79492601-79492620 None:intergenic 55.0%
ATTGGGGCTTGGCAATGAGC+TGG + chr3_1:79492602-79492621 None:intergenic 55.0%
AGCTCATTGCCAAGCCCCAA+TGG - chr3_1:79492601-79492620 Msa0378650:intron 55.0%
GAGCAACAGACCAGGTTTGC+GGG + chr3_1:79493258-79493277 None:intergenic 55.0%
GCTCTCAACCATGAGGGCTT+TGG - chr3_1:79493274-79493293 Msa0378650:CDS 55.0%
CCCGGCAACGAAGATGGTGT+CGG + chr3_1:79492556-79492575 None:intergenic 60.0%
CCGACACCATCTTCGTTGCC+GGG - chr3_1:79492553-79492572 Msa0378650:intron 60.0%
ATACGGCCCGGCAACGAAGA+TGG + chr3_1:79492562-79492581 None:intergenic 60.0%
TGGGGCTTGGCAATGAGCTG+GGG + chr3_1:79492600-79492619 None:intergenic 60.0%
! ACCCTGGCAGGTTGGCCATT+GGG + chr3_1:79492619-79492638 None:intergenic 60.0%
! TACCCTGGCAGGTTGGCCAT+TGG + chr3_1:79492620-79492639 None:intergenic 60.0%
! GTTGAGGTTCGGTTGCGGGA+AGG - chr3_1:79493203-79493222 Msa0378650:CDS 60.0%
! AGGTTCGGTTGCGGGAAGGA+AGG - chr3_1:79493207-79493226 Msa0378650:CDS 60.0%
! GGTTCGGTTGCGGGAAGGAA+GGG - chr3_1:79493208-79493227 Msa0378650:CDS 60.0%
! GCAGGTTGGCCATTGGGGCT+TGG + chr3_1:79492613-79492632 None:intergenic 65.0%
! CCCTGGCAGGTTGGCCATTG+GGG + chr3_1:79492618-79492637 None:intergenic 65.0%
CCCCAATGGCCAACCTGCCA+GGG - chr3_1:79492615-79492634 Msa0378650:intron 65.0%
GCCCCAATGGCCAACCTGCC+AGG - chr3_1:79492614-79492633 Msa0378650:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 79491138 79493779 79491138 ID=Msa0378650;Name=Msa0378650
chr3_1 mRNA 79491138 79493779 79491138 ID=Msa0378650-mRNA-1;Parent=Msa0378650;Name=Msa0378650-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.75|1|1|1|4|122|488
chr3_1 exon 79491138 79491343 79491138 ID=Msa0378650-mRNA-1:exon:19611;Parent=Msa0378650-mRNA-1
chr3_1 exon 79491544 79491714 79491544 ID=Msa0378650-mRNA-1:exon:19610;Parent=Msa0378650-mRNA-1
chr3_1 exon 79492281 79492505 79492281 ID=Msa0378650-mRNA-1:exon:19609;Parent=Msa0378650-mRNA-1
chr3_1 exon 79492793 79493779 79492793 ID=Msa0378650-mRNA-1:exon:19608;Parent=Msa0378650-mRNA-1
chr3_1 CDS 79492793 79493779 79492793 ID=Msa0378650-mRNA-1:cds;Parent=Msa0378650-mRNA-1
chr3_1 CDS 79492281 79492505 79492281 ID=Msa0378650-mRNA-1:cds;Parent=Msa0378650-mRNA-1
chr3_1 CDS 79491544 79491714 79491544 ID=Msa0378650-mRNA-1:cds;Parent=Msa0378650-mRNA-1
chr3_1 CDS 79491260 79491343 79491260 ID=Msa0378650-mRNA-1:cds;Parent=Msa0378650-mRNA-1
chr3_1 three_prime_UTR 79491138 79491259 79491138 ID=Msa0378650-mRNA-1:three_prime_utr;Parent=Msa0378650-mRNA-1
Gene Sequence

>Msa0378650

ATGATGTCCAGAATGAACAACAACAACAACAATGGTTGGATGGAAGAAAGAGAAGACGAAAACAACACTACAAACCCAAACACTCCTTCATCTGCTTTCATCCATAACCATAACAACAGACAACAACAACAACAACAACAAGATTTCTCTTCTTTCATCAAACCCATGCTTGGTGAAATCGATGAAGACGATGAAGAATGGTACATCAGAGACATGTCTTTTTCTTCTTCCCCTAACTTAGACAATGTTTTACTTCACACCATCAATGATTCCGTTTCTTCTTCATGTTCACCTTCTTCCTCCGTTTTCAACACCCTTCTTCATCCTCAACCAACACCAACACCATCCAATTCCAACCATCTTCAGTACTTTCATCCTCCTCAAAATCAAAAACCCATTAACCCTTTTGACCTTCCTTGTGAACTTGGTTTTCTTGATCATCAAGCTTCAGCAATGGCTACTTCTTCTTTTATGGGTAGTTTCGTTGATTTCGCTTCGAAAACTCCATTAACAGCTGCTACTACTACTCAGTTGAGCTTGCCCCATTTGCCTCAAATCAACAATGCCTTCATGGGGTTTCAGAACTCTCAAGAGGGTTCTGGAAAGTCACTGTTTTTGAGGCCACTTGATTCTTTGCCTTCTTCTGGAACACAACCTACTCTGTTTCAGAAAAGAGCAGCACTGAGGAAAAACATGGGCAAGTGTGAGATTGGTGAAGGGAGTGATAAGAAAAGGAAGTTCAGTGGTGGAGATGAAATTGATGATTTGAGTTTTGATGGGTCTGGTTTGAACTATGATTCTGATGATTTGACTGAGAGTAATGGAAAAAATATTGGAAATGGTTCCAATGGTAATAGCACTGTCACTGATCAGAAAGGGAAGAAGAAAGGAATGCCTGCTAAGAATTTGATGGCTGAACGTCGCCGGAGAAAGAAGCTCAATGATAGACTCTATATGCTGAGGTCCGTTGTTCCAAAGATTAGCAAAATGGATAGGGCTTCAATTCTTGGGGATGCAATTGAGTATCTTAAGGAACTTCTGCAAAGGATCAATGACCTTCATAATGAATTGGAATCAACACCTGCTGGATCTTCACTAACACCTGCTTCAAGCTTCCATCCTTTGACACCGACACCATCTTCGTTGCCGGGCCGTATCAAAGAAGAACTATGCCCCAGCTCATTGCCAAGCCCCAATGGCCAACCTGCCAGGGTTGAGGTTCGGTTGCGGGAAGGAAGGGCTGTAAATATCCACATGTTTTGTACCCGCAAACCTGGTCTGTTGCTCTCAACCATGAGGGCTTTGGATAACCTTGGATTAGACATTCAGCAAGCTGTTATAAGTTGTTTCAATGGATTTGCTATGGATATTTTCAGAGCTGAGCAATGCAAAGAAGGTCAAGATGTCCATCCAGAGCAAATCAAAGCAGTACTCTTGGATTCAGCTGGCTTCAATGGCATGATCTAA
Protein sequence

>Msa0378650

MMSRMNNNNNNGWMEEREDENNTTNPNTPSSAFIHNHNNRQQQQQQQDFSSFIKPMLGEIDEDDEEWYIRDMSFSSSPNLDNVLLHTINDSVSSSCSPSSSVFNTLLHPQPTPTPSNSNHLQYFHPPQNQKPINPFDLPCELGFLDHQASAMATSSFMGSFVDFASKTPLTAATTTQLSLPHLPQINNAFMGFQNSQEGSGKSLFLRPLDSLPSSGTQPTLFQKRAALRKNMGKCEIGEGSDKKRKFSGGDEIDDLSFDGSGLNYDSDDLTESNGKNIGNGSNGNSTVTDQKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPAGSSLTPASSFHPLTPTPSSLPGRIKEELCPSSLPSPNGQPARVEVRLREGRAVNIHMFCTRKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKAVLLDSAGFNGMI*