Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379050 | XP_003602796.2 | 95.701 | 535 | 18 | 1 | 1 | 530 | 1 | 535 | 0.0 | 1043 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379050 | sp|Q9FMV0|FBL91_ARATH | 44.757 | 534 | 268 | 8 | 2 | 523 | 9 | 527 | 7.21e-133 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379050 | G7J3V2 | 95.701 | 535 | 18 | 1 | 1 | 530 | 1 | 535 | 0.0 | 1043 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0379050 | Msa0475040 | 0.930458 | 1.591114e-93 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379050 | MtrunA17_Chr3g0132101 | 95.701 | 535 | 18 | 1 | 1 | 530 | 1 | 535 | 0.0 | 1043 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379050 | AT5G63520.1 | 44.757 | 534 | 268 | 8 | 2 | 523 | 9 | 527 | 7.33e-134 | 399 |
Find 148 sgRNAs with CRISPR-Local
Find 617 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTGCTATTGTCAATAT+TGG | 0.186609 | 3_1:+79939019 | Msa0379050:CDS |
| TGCTGATAGCTCCCCTTTCT+TGG | 0.232651 | 3_1:+79946885 | Msa0379050:CDS |
| ACATACACAAAACTACTTAT+AGG | 0.266052 | 3_1:-79947212 | None:intergenic |
| AATAAATTTACTACCTTTGC+TGG | 0.290996 | 3_1:-79939457 | None:intergenic |
| TTGCTGATGCCCTTCCCTTT+TGG | 0.302128 | 3_1:-79941939 | None:intergenic |
| CTGGTCACCAATTCCCTGTT+GGG | 0.314177 | 3_1:+79940395 | Msa0379050:CDS |
| GATGATGACGATTGCGGGCT+CGG | 0.322397 | 3_1:-79938529 | None:intergenic |
| GAAAGTGCAGAGGCGAGTTT+AGG | 0.330959 | 3_1:-79938846 | None:intergenic |
| ACCTTTGCTGGTCGTATTAT+CGG | 0.334932 | 3_1:-79939445 | None:intergenic |
| CAACTGATGGGCTTTGCATC+TGG | 0.350693 | 3_1:-79946991 | None:intergenic |
| CCAAATAATATAACCCCAAC+AGG | 0.351757 | 3_1:-79940409 | None:intergenic |
| TGATATGCAATACAAGTTCT+TGG | 0.356511 | 3_1:-79943629 | None:intergenic |
| ACGGTGAATAATGGTATTAT+TGG | 0.368317 | 3_1:+79939194 | Msa0379050:CDS |
| GAAGAGTATCTTTATGTTGA+TGG | 0.378959 | 3_1:+79946646 | Msa0379050:CDS |
| ATTCCAGCCAATGGCACTCC+TGG | 0.384565 | 3_1:-79946916 | None:intergenic |
| TATTTGCTCAAGACAGAAAC+AGG | 0.387982 | 3_1:+79941078 | Msa0379050:CDS |
| ATGATCTGTGTAGGTGAAAT+GGG | 0.388521 | 3_1:+79939318 | Msa0379050:intron |
| TCCATCACTCTCCGAACTCC+TGG | 0.391635 | 3_1:-79946785 | None:intergenic |
| TTGACAATTGGCTGTTTGCC+AGG | 0.398522 | 3_1:+79939403 | Msa0379050:CDS |
| AATGAAGCTGATGCAACATT+AGG | 0.408491 | 3_1:-79946715 | None:intergenic |
| ATATAACCCCAACAGGGAAT+TGG | 0.408501 | 3_1:-79940402 | None:intergenic |
| CAATATTCCGGTGGTTGTTA+CGG | 0.410754 | 3_1:+79939175 | Msa0379050:CDS |
| CATTGGCTTCTCTGCTCCAA+TGG | 0.423463 | 3_1:-79943606 | None:intergenic |
| AGCCTCCTGAGTTGTACATT+GGG | 0.426994 | 3_1:+79943561 | Msa0379050:CDS |
| GAAGGATATGGCAGGAAGTC+TGG | 0.427857 | 3_1:-79938763 | None:intergenic |
| GATGGAATGGGCATCAAAAC+AGG | 0.429214 | 3_1:+79946664 | Msa0379050:CDS |
| TATCTTTATGTTGATGGAAT+GGG | 0.430540 | 3_1:+79946652 | Msa0379050:CDS |
| CAAGACAGAAACAGGTCTTC+TGG | 0.431964 | 3_1:+79941086 | Msa0379050:CDS |
| GAAACTGGTCATGGAGAAGT+TGG | 0.433233 | 3_1:+79940550 | Msa0379050:CDS |
| TTAAGTTGGGGAGAAATTCC+AGG | 0.434107 | 3_1:+79946767 | Msa0379050:CDS |
| AGTTGCAGAAGCGAAGGATA+TGG | 0.434188 | 3_1:-79938775 | None:intergenic |
| AGCAAGCAGTGACATGAAAC+TGG | 0.435350 | 3_1:+79940535 | Msa0379050:CDS |
| GAGAGTAGGGTTCAATATTC+CGG | 0.435677 | 3_1:+79939163 | Msa0379050:CDS |
| TTTCCAGGAGTGCCATTGGC+TGG | 0.437375 | 3_1:+79946913 | Msa0379050:CDS |
| CCTGGAAAATTCTCCAAGAA+AGG | 0.438977 | 3_1:-79946898 | None:intergenic |
| ATAGCAAAGTACGGTCGAAT+TGG | 0.439970 | 3_1:-79939007 | None:intergenic |
| GATGATCTGTGTAGGTGAAA+TGG | 0.440565 | 3_1:+79939317 | Msa0379050:intron |
| GCAATACAAGTTCTTGGCAT+TGG | 0.442397 | 3_1:-79943623 | None:intergenic |
| TCTGGTCACCAATTCCCTGT+TGG | 0.442641 | 3_1:+79940394 | Msa0379050:CDS |
| GGGGAGAAATTCCAGGAGTT+CGG | 0.444718 | 3_1:+79946774 | Msa0379050:CDS |
| TTCAGATTATGCCATGCCTA+TGG | 0.449040 | 3_1:+79940950 | Msa0379050:intron |
| TTTCATGTTGCCTTCTCAAA+TGG | 0.452523 | 3_1:+79941839 | Msa0379050:CDS |
| CTGGAAAATTCTCCAAGAAA+GGG | 0.453145 | 3_1:-79946897 | None:intergenic |
| CAACATGGCTAACTGCCAAA+AGG | 0.456974 | 3_1:+79941924 | Msa0379050:CDS |
| TCTTCATGATATTAACACTT+TGG | 0.461779 | 3_1:+79941982 | Msa0379050:CDS |
| AAATGTACACTGCTAGTTTG+AGG | 0.462441 | 3_1:+79947105 | Msa0379050:three_prime_UTR |
| TATGTACCCTTTACTACTAC+AGG | 0.467259 | 3_1:-79941039 | None:intergenic |
| GAATACTCAGCCTCTGTCTC+TGG | 0.467954 | 3_1:+79940376 | Msa0379050:CDS |
| GCCTATGGACACAGTCGTTG+TGG | 0.469323 | 3_1:+79940965 | Msa0379050:CDS |
| CGTCCTTGTACCACTATGAT+TGG | 0.474698 | 3_1:+79946961 | Msa0379050:CDS |
| GTGGTTGTTACGGTGAATAA+TGG | 0.474778 | 3_1:+79939185 | Msa0379050:CDS |
| TAGTCCATGTGCATGGCAAA+TGG | 0.476181 | 3_1:-79947142 | None:intergenic |
| AGTTAGCCATGTTGAACAAT+CGG | 0.477094 | 3_1:-79941915 | None:intergenic |
| GGGCATCAGCAACCTCTTGA+TGG | 0.482231 | 3_1:+79941950 | Msa0379050:CDS |
| GAGCCTCCTGAGTTGTACAT+TGG | 0.482715 | 3_1:+79943560 | Msa0379050:CDS |
| CAACTTGCGTTAACAACTCA+TGG | 0.483919 | 3_1:+79938793 | Msa0379050:CDS |
| ACAAGCCTCAGAATCTTGTT+CGG | 0.494611 | 3_1:-79939055 | None:intergenic |
| CGGTGGTTCCTCCATTGTTG+TGG | 0.497191 | 3_1:-79938640 | None:intergenic |
| GGTGAATGAAGTTGTCGATA+AGG | 0.501486 | 3_1:+79938973 | Msa0379050:CDS |
| AGAACTTGTATTGCATATCA+TGG | 0.501821 | 3_1:+79943632 | Msa0379050:CDS |
| GCTATTGTCAATATTGGATG+TGG | 0.503389 | 3_1:+79939025 | Msa0379050:CDS |
| GACACGCCTGTAGTAGTAAA+GGG | 0.503670 | 3_1:+79941033 | Msa0379050:CDS |
| GTATCTTTATGTTGATGGAA+TGG | 0.505249 | 3_1:+79946651 | Msa0379050:CDS |
| CTCAAATGGTGTTTCACATG+TGG | 0.507829 | 3_1:+79941853 | Msa0379050:CDS |
| AGAAATGATGCGATTACAAA+CGG | 0.508390 | 3_1:-79938820 | None:intergenic |
| TGAATAATGGTATTATTGGA+AGG | 0.511200 | 3_1:+79939198 | Msa0379050:CDS |
| TGTTACTGATGAATTTAAAG+AGG | 0.511399 | 3_1:+79939226 | Msa0379050:CDS |
| CTACAAGTGAAAAGCTAAGT+GGG | 0.513223 | 3_1:+79947289 | Msa0379050:three_prime_UTR |
| GAGGACGTTGATGCCGGTGA+TGG | 0.514149 | 3_1:-79938712 | None:intergenic |
| ATAGCTTCAACTTTCAGTCC+TGG | 0.514175 | 3_1:-79939421 | None:intergenic |
| GTCGCTGAGGACGTTGATGC+CGG | 0.515133 | 3_1:-79938718 | None:intergenic |
| AGACACGCCTGTAGTAGTAA+AGG | 0.515574 | 3_1:+79941032 | Msa0379050:CDS |
| TATGCGAGACATATAAATGA+AGG | 0.520058 | 3_1:+79939373 | Msa0379050:CDS |
| GTGCAGGTTAAGCGGAGAGT+AGG | 0.523337 | 3_1:+79939149 | Msa0379050:intron |
| AACATGGCTAACTGCCAAAA+GGG | 0.525547 | 3_1:+79941925 | Msa0379050:CDS |
| TCCTCAATCGATCCCATCAC+CGG | 0.528959 | 3_1:+79938699 | Msa0379050:CDS |
| CCTATGGACACAGTCGTTGT+GGG | 0.531940 | 3_1:+79940966 | Msa0379050:CDS |
| AGGACGTTGATGCCGGTGAT+GGG | 0.538220 | 3_1:-79938711 | None:intergenic |
| ATTGCATATCATGGCGTTGT+GGG | 0.542292 | 3_1:+79943641 | Msa0379050:CDS |
| CTATCAACACATGGTTCTTG+AGG | 0.542954 | 3_1:-79940334 | None:intergenic |
| CTTGTCGTGATTGTATCACA+TGG | 0.548801 | 3_1:+79947171 | Msa0379050:three_prime_UTR |
| TGCAGGTTAAGCGGAGAGTA+GGG | 0.550841 | 3_1:+79939150 | Msa0379050:intron |
| TCAAATGGTGTTTCACATGT+GGG | 0.550879 | 3_1:+79941854 | Msa0379050:CDS |
| GTCGTTGTGGGCGATGAAAG+AGG | 0.552207 | 3_1:+79940978 | Msa0379050:CDS |
| TGGCTAACTGCCAAAAGGGA+AGG | 0.554609 | 3_1:+79941929 | Msa0379050:CDS |
| GCCGGTGATGGGATCGATTG+AGG | 0.555918 | 3_1:-79938700 | None:intergenic |
| ACATGTGGGTGGCAGATACA+AGG | 0.556075 | 3_1:+79941868 | Msa0379050:CDS |
| AAGCATAGGAAAGTCTCCAT+TGG | 0.565032 | 3_1:+79943590 | Msa0379050:CDS |
| TTAGGACTTACGCGGAGTGA+AGG | 0.565737 | 3_1:-79938876 | None:intergenic |
| GGCTAACTGCCAAAAGGGAA+GGG | 0.569192 | 3_1:+79941930 | Msa0379050:CDS |
| TTCCAACGGTGCAGGTTAAG+CGG | 0.569786 | 3_1:+79939141 | Msa0379050:intron |
| TGGTCACCAATTCCCTGTTG+GGG | 0.570668 | 3_1:+79940396 | Msa0379050:CDS |
| ACCGATAATACGACCAGCAA+AGG | 0.572862 | 3_1:+79939444 | Msa0379050:CDS |
| CGAGTCGTCAACGCAAAATG+TGG | 0.577022 | 3_1:-79938609 | None:intergenic |
| GAATAATGGTATTATTGGAA+GGG | 0.577832 | 3_1:+79939199 | Msa0379050:CDS |
| TTGATCCGAACAAGATTCTG+AGG | 0.578875 | 3_1:+79939050 | Msa0379050:CDS |
| TCCAGGAGTTCGGAGAGTGA+TGG | 0.582620 | 3_1:+79946784 | Msa0379050:CDS |
| GCAGAAGCGAAGGATATGGC+AGG | 0.583149 | 3_1:-79938771 | None:intergenic |
| TCTACAAGTGAAAAGCTAAG+TGG | 0.583367 | 3_1:+79947288 | Msa0379050:three_prime_UTR |
| ATGCAACATTAGGATCTGAA+TGG | 0.584117 | 3_1:-79946705 | None:intergenic |
| TGCTTCAGAAGATGTGAAGT+CGG | 0.584903 | 3_1:-79947260 | None:intergenic |
| AAACTGGTCATGGAGAAGTT+GGG | 0.590178 | 3_1:+79940551 | Msa0379050:CDS |
| TGGAAAATTCTCCAAGAAAG+GGG | 0.593150 | 3_1:-79946896 | None:intergenic |
| AACGCAAGTTGCAGAAGCGA+AGG | 0.595005 | 3_1:-79938781 | None:intergenic |
| TTATTCACCGTAACAACCAC+CGG | 0.597520 | 3_1:-79939182 | None:intergenic |
| GTCATATGATCCTCCCTCTG+TGG | 0.601735 | 3_1:+79947050 | Msa0379050:CDS |
| CAGTGACATGAAACTGGTCA+TGG | 0.603366 | 3_1:+79940541 | Msa0379050:CDS |
| GGATGCTCTGTATTCAGATG+TGG | 0.604523 | 3_1:+79940999 | Msa0379050:CDS |
| TATTGCATATCATGGCGTTG+TGG | 0.604944 | 3_1:+79943640 | Msa0379050:CDS |
| CAAATACAGCAACAAAGTTG+CGG | 0.605045 | 3_1:-79947333 | None:intergenic |
| CCACAAAACATTCCAGCCAA+TGG | 0.605606 | 3_1:-79946925 | None:intergenic |
| AGAATAGTTTGACCATCAAG+AGG | 0.607138 | 3_1:-79941962 | None:intergenic |
| TCGAATTCGAACCACAACAA+TGG | 0.612813 | 3_1:+79938629 | Msa0379050:exon |
| AACGACTGTGTCCATAGGCA+TGG | 0.613132 | 3_1:-79940961 | None:intergenic |
| AGACCAATCATAGTGGTACA+AGG | 0.618834 | 3_1:-79946964 | None:intergenic |
| CCCACAACGACTGTGTCCAT+AGG | 0.620691 | 3_1:-79940966 | None:intergenic |
| GTCACCCCAATGTACAACTC+AGG | 0.621670 | 3_1:-79943566 | None:intergenic |
| TCATCGCGATCGACCTCCAG+AGG | 0.622027 | 3_1:+79938672 | Msa0379050:CDS |
| ATGTGAAACACCATTTGAGA+AGG | 0.625073 | 3_1:-79941849 | None:intergenic |
| AGCATCTAATGATCCACAGA+GGG | 0.628970 | 3_1:-79947063 | None:intergenic |
| GATAGTCTAGTCCATGTGCA+TGG | 0.636528 | 3_1:-79947149 | None:intergenic |
| ATCTAATGATCCACAGAGGG+AGG | 0.637365 | 3_1:-79947060 | None:intergenic |
| ATATTGACAATAGCAAAGTA+CGG | 0.639461 | 3_1:-79939016 | None:intergenic |
| TGGACATAGACCAATCATAG+TGG | 0.640904 | 3_1:-79946971 | None:intergenic |
| TGCATCAGCTTCATTAACTG+AGG | 0.647261 | 3_1:+79946723 | Msa0379050:CDS |
| TTGCATATCATGGCGTTGTG+GGG | 0.647968 | 3_1:+79943642 | Msa0379050:CDS |
| AATTCGAACCACAACAATGG+AGG | 0.649324 | 3_1:+79938632 | Msa0379050:exon |
| ACACAAAACTACTTATAGGA+CGG | 0.650508 | 3_1:-79947208 | None:intergenic |
| TACAAGTGAAAAGCTAAGTG+GGG | 0.650564 | 3_1:+79947290 | Msa0379050:three_prime_UTR |
| AGGATTGAGAGAAAGTGCAG+AGG | 0.657411 | 3_1:-79938856 | None:intergenic |
| ACATTGGGGTGACTAAGCAT+AGG | 0.657517 | 3_1:+79943576 | Msa0379050:CDS |
| GAATTGGTGACCAGAGACAG+AGG | 0.664090 | 3_1:-79940386 | None:intergenic |
| AGTAGGGTTCAATATTCCGG+TGG | 0.667610 | 3_1:+79939166 | Msa0379050:CDS |
| GCTTCATTAACTGAGGTCCG+TGG | 0.669935 | 3_1:+79946730 | Msa0379050:CDS |
| GCCTCCTGAGTTGTACATTG+GGG | 0.672409 | 3_1:+79943562 | Msa0379050:CDS |
| ACCCCAATGTACAACTCAGG+AGG | 0.673869 | 3_1:-79943563 | None:intergenic |
| TGTACACTGCTAGTTTGAGG+AGG | 0.674497 | 3_1:+79947108 | Msa0379050:three_prime_UTR |
| ACAAATCCGATTGTTCAACA+TGG | 0.675000 | 3_1:+79941909 | Msa0379050:CDS |
| TTGTCGTGATTGTATCACAT+GGG | 0.681453 | 3_1:+79947172 | Msa0379050:three_prime_UTR |
| GAAGTCTGGAGAAAATGTTG+TGG | 0.685995 | 3_1:-79938749 | None:intergenic |
| TGTGGAGAAGATCGTCGCTG+AGG | 0.695115 | 3_1:-79938731 | None:intergenic |
| CAAATAATATAACCCCAACA+GGG | 0.704106 | 3_1:-79940408 | None:intergenic |
| AATGGTGTTTCACATGTGGG+TGG | 0.706024 | 3_1:+79941857 | Msa0379050:CDS |
| GATCGCGATGATGATGAACA+CGG | 0.715093 | 3_1:-79938660 | None:intergenic |
| ATTACAAAACTATCAACACA+TGG | 0.720306 | 3_1:-79940343 | None:intergenic |
| CAGCATCTAATGATCCACAG+AGG | 0.738410 | 3_1:-79947064 | None:intergenic |
| TGATCTGTGTAGGTGAAATG+GGG | 0.747024 | 3_1:+79939319 | Msa0379050:intron |
| CGCGATGATGATGAACACGG+TGG | 0.772958 | 3_1:-79938657 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAAATTTATTCAAAAATT+TGG | + | chr3_1:79939468-79939487 | Msa0379050:intron | 10.0% |
| !! | AAAAAAAAAAATATAGCAAT+AGG | - | chr3_1:79941622-79941641 | None:intergenic | 10.0% |
| !!! | ATAAAAAGTTTAAGTTATTA+AGG | + | chr3_1:79942103-79942122 | Msa0379050:intron | 10.0% |
| !!! | ATATTATTTTGAAAATTGTT+TGG | + | chr3_1:79943106-79943125 | Msa0379050:intron | 10.0% |
| !! | TTAAATTGAAAACATTTATA+AGG | - | chr3_1:79945322-79945341 | None:intergenic | 10.0% |
| !! | ATAAAAAATAAATCTTCAAA+TGG | - | chr3_1:79946356-79946375 | None:intergenic | 10.0% |
| !! | TATAGTTAATTTATCAATCT+TGG | + | chr3_1:79940477-79940496 | Msa0379050:intron | 15.0% |
| !! | TACATATTTATTTACTCAAA+AGG | + | chr3_1:79940589-79940608 | Msa0379050:intron | 15.0% |
| !!! | ATTTTATACTTAAACTTAGA+TGG | + | chr3_1:79940811-79940830 | Msa0379050:intron | 15.0% |
| !!! | TTTTATACTTAAACTTAGAT+GGG | + | chr3_1:79940812-79940831 | Msa0379050:intron | 15.0% |
| !!! | AGTTTTAAGAAAAAAATAAG+TGG | + | chr3_1:79941330-79941349 | Msa0379050:intron | 15.0% |
| !!! | GTTTTAAGAAAAAAATAAGT+GGG | + | chr3_1:79941331-79941350 | Msa0379050:intron | 15.0% |
| !! | TAGAAATTTCCATTATAAAA+GGG | + | chr3_1:79941382-79941401 | Msa0379050:intron | 15.0% |
| !! | AAAATTTATCATTTACAGAA+AGG | + | chr3_1:79942133-79942152 | Msa0379050:intron | 15.0% |
| !! | ACTAATCAAATAATAAATAG+TGG | + | chr3_1:79942566-79942585 | Msa0379050:intron | 15.0% |
| !! | AAAACATAAATAGCAATAAA+AGG | - | chr3_1:79943493-79943512 | None:intergenic | 15.0% |
| !! | AAAATCATTAGAAAAATAGT+TGG | + | chr3_1:79944318-79944337 | Msa0379050:intron | 15.0% |
| !! | AAATCATTAGAAAAATAGTT+GGG | + | chr3_1:79944319-79944338 | Msa0379050:intron | 15.0% |
| !!! | TTTTTTAAGAAGATAAAGAT+AGG | - | chr3_1:79944596-79944615 | None:intergenic | 15.0% |
| !!! | GTCATCTAAAATTATAAATT+TGG | + | chr3_1:79944822-79944841 | Msa0379050:intron | 15.0% |
| !! | GAAACTTAGAAATTAATTAA+GGG | - | chr3_1:79945164-79945183 | None:intergenic | 15.0% |
| !! | TGAAACTTAGAAATTAATTA+AGG | - | chr3_1:79945165-79945184 | None:intergenic | 15.0% |
| !!! | AACGAAACTTTTATTAATTA+GGG | - | chr3_1:79945196-79945215 | None:intergenic | 15.0% |
| !!! | AAACGAAACTTTTATTAATT+AGG | - | chr3_1:79945197-79945216 | None:intergenic | 15.0% |
| !!! | TTTATGTTTTTTTTTCTTCT+GGG | - | chr3_1:79945500-79945519 | None:intergenic | 15.0% |
| !!! | TTTTATGTTTTTTTTTCTTC+TGG | - | chr3_1:79945501-79945520 | None:intergenic | 15.0% |
| !! | AAAATATTAAAAATGGCTTT+GGG | - | chr3_1:79945555-79945574 | None:intergenic | 15.0% |
| !! | AAAAATATTAAAAATGGCTT+TGG | - | chr3_1:79945556-79945575 | None:intergenic | 15.0% |
| !! | AAGAAAAATTGAAAAAAATC+AGG | + | chr3_1:79946115-79946134 | Msa0379050:intron | 15.0% |
| !!! | GAAAAAATGGATTATTAAAT+GGG | - | chr3_1:79946398-79946417 | None:intergenic | 15.0% |
| !!! | TTTTAAATGTGATGATAAAG+AGG | - | chr3_1:79939778-79939797 | None:intergenic | 20.0% |
| !! | CTTTATCATCACATTTAAAA+TGG | + | chr3_1:79939778-79939797 | Msa0379050:intron | 20.0% |
| !! | ATGGAGATTAAAAAATCATA+AGG | + | chr3_1:79939913-79939932 | Msa0379050:intron | 20.0% |
| !! | TTTACTCAAAAGGAAAAAAT+CGG | + | chr3_1:79940599-79940618 | Msa0379050:intron | 20.0% |
| !!! | ATTTTGTAACAGAATATTAC+AGG | - | chr3_1:79940767-79940786 | None:intergenic | 20.0% |
| !! | ATTCTGTTACAAAATAAGTA+TGG | + | chr3_1:79940772-79940791 | Msa0379050:intron | 20.0% |
| !! | TTCTGTTACAAAATAAGTAT+GGG | + | chr3_1:79940773-79940792 | Msa0379050:intron | 20.0% |
| !! | GAAATTTATGTAGTTAATCA+AGG | + | chr3_1:79941306-79941325 | Msa0379050:intron | 20.0% |
| !! | CTAGAAATTTCCATTATAAA+AGG | + | chr3_1:79941381-79941400 | Msa0379050:intron | 20.0% |
| !! | CAATCATCAATATTGTATTT+AGG | + | chr3_1:79942676-79942695 | Msa0379050:intron | 20.0% |
| !! | TTAAATCCTTGATATCAAAT+TGG | + | chr3_1:79942712-79942731 | Msa0379050:intron | 20.0% |
| !!! | TTATTTTGAAAATTGTTTGG+AGG | + | chr3_1:79943109-79943128 | Msa0379050:intron | 20.0% |
| !!! | ACATTAGTTTTACAAAACAT+TGG | - | chr3_1:79943434-79943453 | None:intergenic | 20.0% |
| !! | CTTGTTAATATGAAATTCTT+CGG | + | chr3_1:79943710-79943729 | Msa0379050:intron | 20.0% |
| !! | TATACTATTTATGAAATGAC+AGG | + | chr3_1:79944056-79944075 | Msa0379050:intron | 20.0% |
| !! | TTCAAATATTCAATACCATA+TGG | - | chr3_1:79944228-79944247 | None:intergenic | 20.0% |
| !!! | CTTTGTTTTATAGTTTTCAT+TGG | - | chr3_1:79944473-79944492 | None:intergenic | 20.0% |
| !!! | GTTTGTTCTATATTTTTCAA+TGG | - | chr3_1:79944552-79944571 | None:intergenic | 20.0% |
| !!! | ACAAGAGTTAAATTTTTGTA+TGG | - | chr3_1:79944874-79944893 | None:intergenic | 20.0% |
| !! | AATATGTAATTTAGCCTAAA+AGG | - | chr3_1:79945137-79945156 | None:intergenic | 20.0% |
| !! | TTTAGGCTAAATTACATATT+TGG | + | chr3_1:79945137-79945156 | Msa0379050:intron | 20.0% |
| !! | TTAATTTCTAAGTTTCACTT+TGG | + | chr3_1:79945168-79945187 | Msa0379050:intron | 20.0% |
| !!! | ACGAAACTTTTATTAATTAG+GGG | - | chr3_1:79945195-79945214 | None:intergenic | 20.0% |
| !! | TATTTCAAAAAAAGATCAAG+CGG | - | chr3_1:79945346-79945365 | None:intergenic | 20.0% |
| !! | AAAAAAAAATACGACATAAG+AGG | - | chr3_1:79945621-79945640 | None:intergenic | 20.0% |
| !!! | GTTTTTTGTGTTTAGTTTAT+GGG | + | chr3_1:79945674-79945693 | Msa0379050:intron | 20.0% |
| !!! | ATATTATGCTTTGATGTTTT+AGG | + | chr3_1:79945716-79945735 | Msa0379050:intron | 20.0% |
| !!! | TTTCATAATTTTTCCAGATT+TGG | - | chr3_1:79945932-79945951 | None:intergenic | 20.0% |
| !! | GGAAAAATTATGAAATGAAT+AGG | + | chr3_1:79945937-79945956 | Msa0379050:intron | 20.0% |
| !! | TTATGAAATGAATAGGATAT+AGG | + | chr3_1:79945944-79945963 | Msa0379050:intron | 20.0% |
| !! | ACATTAAAAAACTAACAGAA+AGG | + | chr3_1:79946207-79946226 | Msa0379050:intron | 20.0% |
| !!! | AGTTAATAAAAGTTTCGTTT+TGG | - | chr3_1:79946266-79946285 | None:intergenic | 20.0% |
| !!! | GGAAAAAATGGATTATTAAA+TGG | - | chr3_1:79946399-79946418 | None:intergenic | 20.0% |
| !! | AGTATTAAAATTATGGAAAG+TGG | - | chr3_1:79946425-79946444 | None:intergenic | 20.0% |
| !!! | CAAGTAGAGTATTAAAATTA+TGG | - | chr3_1:79946432-79946451 | None:intergenic | 20.0% |
| !! | GAAAACTTATAGTTACAATA+GGG | - | chr3_1:79946606-79946625 | None:intergenic | 20.0% |
| !! | TGAAAACTTATAGTTACAAT+AGG | - | chr3_1:79946607-79946626 | None:intergenic | 20.0% |
| !!! | AACTATAAGTTTTCATGTTT+TGG | + | chr3_1:79946612-79946631 | Msa0379050:intron | 20.0% |
| !!! | TTCCCTTAAAAATTTTAAGT+TGG | + | chr3_1:79946753-79946772 | Msa0379050:CDS | 20.0% |
| !!! | TCCCTTAAAAATTTTAAGTT+GGG | + | chr3_1:79946754-79946773 | Msa0379050:CDS | 20.0% |
| ! | AATTTCATTTCTATTTGACC+AGG | + | chr3_1:79938946-79938965 | Msa0379050:intron | 25.0% |
| ! | ATATTGACAATAGCAAAGTA+CGG | - | chr3_1:79939019-79939038 | None:intergenic | 25.0% |
| !!! | TACTTTGCTATTGTCAATAT+TGG | + | chr3_1:79939019-79939038 | Msa0379050:CDS | 25.0% |
| ! | TGAATAATGGTATTATTGGA+AGG | + | chr3_1:79939198-79939217 | Msa0379050:CDS | 25.0% |
| ! | GAATAATGGTATTATTGGAA+GGG | + | chr3_1:79939199-79939218 | Msa0379050:CDS | 25.0% |
| ! | TGTTACTGATGAATTTAAAG+AGG | + | chr3_1:79939226-79939245 | Msa0379050:CDS | 25.0% |
| ! | AATAAATTTACTACCTTTGC+TGG | - | chr3_1:79939460-79939479 | None:intergenic | 25.0% |
| !!! | TGAAAGTGTGTTTTAAGTTA+GGG | + | chr3_1:79939939-79939958 | Msa0379050:intron | 25.0% |
| ! | ATTACAAAACTATCAACACA+TGG | - | chr3_1:79940346-79940365 | None:intergenic | 25.0% |
| !!! | ATGTGTTGATAGTTTTGTAA+TGG | + | chr3_1:79940345-79940364 | Msa0379050:CDS | 25.0% |
| !!! | TAGTTTTGTAATGGATATCA+AGG | + | chr3_1:79940354-79940373 | Msa0379050:CDS | 25.0% |
| !! | TATGCTTGTTAGAATATTTG+AGG | + | chr3_1:79940633-79940652 | Msa0379050:intron | 25.0% |
| ! | ATGTTGTTGTATCTTGTTAA+TGG | + | chr3_1:79941179-79941198 | Msa0379050:intron | 25.0% |
| ! | TTGACAATTCATGTATAACT+TGG | + | chr3_1:79941256-79941275 | Msa0379050:intron | 25.0% |
| ! | GGAATTTCTTTCAAATTTGT+TGG | + | chr3_1:79941352-79941371 | Msa0379050:intron | 25.0% |
| ! | TCTTCATGATATTAACACTT+TGG | + | chr3_1:79941982-79942001 | Msa0379050:CDS | 25.0% |
| !!! | GCGCATTTATTTCTTATTTT+TGG | + | chr3_1:79942006-79942025 | Msa0379050:intron | 25.0% |
| !!! | CATTATTTTGCCTTAATGAA+AGG | - | chr3_1:79942044-79942063 | None:intergenic | 25.0% |
| ! | CAATAATATATATTCCTTCC+TGG | - | chr3_1:79942077-79942096 | None:intergenic | 25.0% |
| ! | GGAAGGAATATATATTATTG+AGG | + | chr3_1:79942077-79942096 | Msa0379050:intron | 25.0% |
| ! | CAACTAAAACCAAAAATATG+AGG | + | chr3_1:79942465-79942484 | Msa0379050:intron | 25.0% |
| !! | CAAGTTTATCCTCATATTTT+TGG | - | chr3_1:79942477-79942496 | None:intergenic | 25.0% |
| ! | TCAAGAAATAATAGAGAATG+AGG | + | chr3_1:79942510-79942529 | Msa0379050:intron | 25.0% |
| ! | TGAATACCAATTTGATATCA+AGG | - | chr3_1:79942721-79942740 | None:intergenic | 25.0% |
| !!! | CATTTGATTTTTGTAAAGCA+CGG | - | chr3_1:79942753-79942772 | None:intergenic | 25.0% |
| !! | TAGTGTTATTAAAACTGACT+TGG | - | chr3_1:79942975-79942994 | None:intergenic | 25.0% |
| !!! | ACTTGTTTTGAATCAGTAAT+TGG | - | chr3_1:79943000-79943019 | None:intergenic | 25.0% |
| !!! | AATTACTGATTCAAAACAAG+TGG | + | chr3_1:79942999-79943018 | Msa0379050:intron | 25.0% |
| ! | GATAAAACTTCATATGTCAA+AGG | + | chr3_1:79943147-79943166 | Msa0379050:intron | 25.0% |
| !! | TGATATTAATTTTGTGCTTG+TGG | + | chr3_1:79943453-79943472 | Msa0379050:intron | 25.0% |
| ! | CGAAGAATTTCATATTAACA+AGG | - | chr3_1:79943712-79943731 | None:intergenic | 25.0% |
| ! | TAGCAAATAGAATGAAAGTT+AGG | + | chr3_1:79943763-79943782 | Msa0379050:intron | 25.0% |
| ! | AGCAAATAGAATGAAAGTTA+GGG | + | chr3_1:79943764-79943783 | Msa0379050:intron | 25.0% |
| !!! | CAGTTAGCTTTTATCATTAT+CGG | - | chr3_1:79943974-79943993 | None:intergenic | 25.0% |
| ! | GTCATATACATCAAGTTATA+TGG | - | chr3_1:79944033-79944052 | None:intergenic | 25.0% |
| ! | AAAAAAAAATCCTAGAGCAT+GGG | - | chr3_1:79944176-79944195 | None:intergenic | 25.0% |
| ! | AAAAAAAAAATCCTAGAGCA+TGG | - | chr3_1:79944177-79944196 | None:intergenic | 25.0% |
| !! | TCTATCATCTTTTCTACAAT+AGG | - | chr3_1:79944350-79944369 | None:intergenic | 25.0% |
| !! | AAACAAAGCTTTAGTAAAGA+AGG | + | chr3_1:79944485-79944504 | Msa0379050:intron | 25.0% |
| ! | GTCATTTAAATCTCTCTTAA+TGG | - | chr3_1:79944574-79944593 | None:intergenic | 25.0% |
| ! | CTGACATTAAAAAAGTCAAT+AGG | - | chr3_1:79944851-79944870 | None:intergenic | 25.0% |
| !! | GTTGTTACTTATTCAAATTC+TGG | + | chr3_1:79945039-79945058 | Msa0379050:intron | 25.0% |
| ! | GTAAAAAATGCTTGTATACA+TGG | + | chr3_1:79945065-79945084 | Msa0379050:intron | 25.0% |
| !! | CTTTTTGTACAACTTATGAT+AGG | + | chr3_1:79945099-79945118 | Msa0379050:intron | 25.0% |
| ! | ATGGTTAAAACATAACAGAA+AGG | - | chr3_1:79945256-79945275 | None:intergenic | 25.0% |
| ! | GAAAACATTTATAAGGTCTA+TGG | - | chr3_1:79945315-79945334 | None:intergenic | 25.0% |
| !!! | TTTTTGAAATAGAGAACCAT+TGG | + | chr3_1:79945355-79945374 | Msa0379050:intron | 25.0% |
| ! | GATGCTGGAATAAAAAATTT+GGG | - | chr3_1:79945592-79945611 | None:intergenic | 25.0% |
| ! | AGATGCTGGAATAAAAAATT+TGG | - | chr3_1:79945593-79945612 | None:intergenic | 25.0% |
| !!! | GGTTTTTTGTGTTTAGTTTA+TGG | + | chr3_1:79945673-79945692 | Msa0379050:intron | 25.0% |
| ! | CAAAAAAAAAACGTTGTTTG+AGG | + | chr3_1:79945897-79945916 | Msa0379050:intron | 25.0% |
| ! | TGAAGAAGATAAAGAAGAAA+AGG | + | chr3_1:79946073-79946092 | Msa0379050:intron | 25.0% |
| ! | AATTGAAAAAAATCAGGTGT+TGG | + | chr3_1:79946121-79946140 | Msa0379050:intron | 25.0% |
| ! | TAAAATTATGGAAAGTGGAA+GGG | - | chr3_1:79946420-79946439 | None:intergenic | 25.0% |
| ! | TTAAAATTATGGAAAGTGGA+AGG | - | chr3_1:79946421-79946440 | None:intergenic | 25.0% |
| !! | TATCTTTATGTTGATGGAAT+GGG | + | chr3_1:79946652-79946671 | Msa0379050:CDS | 25.0% |
| !!! | TAAAATTTTTAAGGGAACCA+CGG | - | chr3_1:79946750-79946769 | None:intergenic | 25.0% |
| !! | CCCCAACTTAAAATTTTTAA+GGG | - | chr3_1:79946758-79946777 | None:intergenic | 25.0% |
| !!! | CCCTTAAAAATTTTAAGTTG+GGG | + | chr3_1:79946755-79946774 | Msa0379050:CDS | 25.0% |
| !! | TCCCCAACTTAAAATTTTTA+AGG | - | chr3_1:79946759-79946778 | None:intergenic | 25.0% |
| ! | ACATACACAAAACTACTTAT+AGG | - | chr3_1:79947215-79947234 | None:intergenic | 25.0% |
| ! | AATCGTCATCATCTTTTTCT+CGG | + | chr3_1:79938539-79938558 | Msa0379050:five_prime_UTR | 30.0% |
| AGAAATGATGCGATTACAAA+CGG | - | chr3_1:79938823-79938842 | None:intergenic | 30.0% | |
| ! | TGCAACTGATTTAATTCCAA+CGG | + | chr3_1:79939127-79939146 | Msa0379050:intron | 30.0% |
| ACGGTGAATAATGGTATTAT+TGG | + | chr3_1:79939194-79939213 | Msa0379050:CDS | 30.0% | |
| TATGCGAGACATATAAATGA+AGG | + | chr3_1:79939373-79939392 | Msa0379050:CDS | 30.0% | |
| AATTAATACCTTGCTACCAA+AGG | + | chr3_1:79939550-79939569 | Msa0379050:intron | 30.0% | |
| TGTTAACAATGCCAATCTTT+GGG | - | chr3_1:79939740-79939759 | None:intergenic | 30.0% | |
| ATGTTAACAATGCCAATCTT+TGG | - | chr3_1:79939741-79939760 | None:intergenic | 30.0% | |
| !! | AGATTTTAGCATAAGAGTAG+AGG | + | chr3_1:79939838-79939857 | Msa0379050:intron | 30.0% |
| !! | GATTTTAGCATAAGAGTAGA+GGG | + | chr3_1:79939839-79939858 | Msa0379050:intron | 30.0% |
| !!! | GTGAAAGTGTGTTTTAAGTT+AGG | + | chr3_1:79939938-79939957 | Msa0379050:intron | 30.0% |
| TACATTTCTCATAGAATCTC+CGG | + | chr3_1:79940121-79940140 | Msa0379050:intron | 30.0% | |
| CAAATAATATAACCCCAACA+GGG | - | chr3_1:79940411-79940430 | None:intergenic | 30.0% | |
| !!! | CTGTTCCTAACATTTTGATT+TGG | + | chr3_1:79940502-79940521 | Msa0379050:intron | 30.0% |
| !!! | TTCCTAACATTTTGATTTGG+TGG | + | chr3_1:79940505-79940524 | Msa0379050:intron | 30.0% |
| ! | TTTTGTGTTAGTGCTCTAAT+TGG | + | chr3_1:79940846-79940865 | Msa0379050:intron | 30.0% |
| AGAAAGTAAGCATGTATTTG+TGG | - | chr3_1:79940903-79940922 | None:intergenic | 30.0% | |
| TTACTTTCTGTCTTCTTTGA+CGG | + | chr3_1:79940914-79940933 | Msa0379050:intron | 30.0% | |
| TGCATTACATTGGAATTATG+TGG | - | chr3_1:79941142-79941161 | None:intergenic | 30.0% | |
| ! | TTTTTGTGCTAGTACAGTAT+TGG | + | chr3_1:79941521-79941540 | Msa0379050:intron | 30.0% |
| AGTTTGTCATCATGCAATAT+AGG | + | chr3_1:79941570-79941589 | Msa0379050:intron | 30.0% | |
| GTTTGTCATCATGCAATATA+GGG | + | chr3_1:79941571-79941590 | Msa0379050:intron | 30.0% | |
| TTTGTCATCATGCAATATAG+GGG | + | chr3_1:79941572-79941591 | Msa0379050:intron | 30.0% | |
| AAAAAAACATATGCAGGACA+GGG | - | chr3_1:79941706-79941725 | None:intergenic | 30.0% | |
| AAAAAAAACATATGCAGGAC+AGG | - | chr3_1:79941707-79941726 | None:intergenic | 30.0% | |
| TGTAACACAAGAAACAATCA+TGG | - | chr3_1:79941733-79941752 | None:intergenic | 30.0% | |
| ! | TGATTGTTTCTTGTGTTACA+TGG | + | chr3_1:79941733-79941752 | Msa0379050:intron | 30.0% |
| AAATAATGTTCGATACTACC+AGG | + | chr3_1:79942056-79942075 | Msa0379050:intron | 30.0% | |
| TCATTTACAGAAAGGTTCAT+TGG | + | chr3_1:79942141-79942160 | Msa0379050:intron | 30.0% | |
| GTATTGGAGATTGATAAGTT+AGG | + | chr3_1:79942209-79942228 | Msa0379050:intron | 30.0% | |
| ATTGATAAGTTAGGATCAGA+GGG | + | chr3_1:79942218-79942237 | Msa0379050:intron | 30.0% | |
| ATCTTCAAAGACAGTTACAT+CGG | + | chr3_1:79942305-79942324 | Msa0379050:intron | 30.0% | |
| TTTGTTCATGATTATACCTC+AGG | - | chr3_1:79942444-79942463 | None:intergenic | 30.0% | |
| ! | ATATTGATGATTGTGATGAG+TGG | - | chr3_1:79942669-79942688 | None:intergenic | 30.0% |
| TACACAACTTAATTACAGAC+CGG | + | chr3_1:79942780-79942799 | Msa0379050:intron | 30.0% | |
| TTCCATAATCATCAAACAAG+CGG | - | chr3_1:79943079-79943098 | None:intergenic | 30.0% | |
| CATCATGATCAGTATCAATA+GGG | - | chr3_1:79943311-79943330 | None:intergenic | 30.0% | |
| TGATATGCAATACAAGTTCT+TGG | - | chr3_1:79943632-79943651 | None:intergenic | 30.0% | |
| AGAACTTGTATTGCATATCA+TGG | + | chr3_1:79943632-79943651 | Msa0379050:CDS | 30.0% | |
| AAAGTTAGGGATAGAATTCA+AGG | + | chr3_1:79943777-79943796 | Msa0379050:intron | 30.0% | |
| TAGTTTCAGTTATGCTTAGT+CGG | - | chr3_1:79943950-79943969 | None:intergenic | 30.0% | |
| AGATGATAGAATCTCATTTG+AGG | + | chr3_1:79944360-79944379 | Msa0379050:intron | 30.0% | |
| !! | ATCCTCTTTATCGATTCTTT+GGG | - | chr3_1:79944410-79944429 | None:intergenic | 30.0% |
| !! | TATCCTCTTTATCGATTCTT+TGG | - | chr3_1:79944411-79944430 | None:intergenic | 30.0% |
| TAGTCTAATAACTAGAGGTA+GGG | + | chr3_1:79944445-79944464 | Msa0379050:intron | 30.0% | |
| ! | AAAGAAGGTATACAAAGTGA+AGG | + | chr3_1:79944500-79944519 | Msa0379050:intron | 30.0% |
| ! | AAGAAGGTATACAAAGTGAA+GGG | + | chr3_1:79944501-79944520 | Msa0379050:intron | 30.0% |
| CTAGAAACGATCTTCTAATT+TGG | + | chr3_1:79944983-79945002 | Msa0379050:intron | 30.0% | |
| TTTGTACAACTTATGATAGG+TGG | + | chr3_1:79945102-79945121 | Msa0379050:intron | 30.0% | |
| TTGTACAACTTATGATAGGT+GGG | + | chr3_1:79945103-79945122 | Msa0379050:intron | 30.0% | |
| TGGTTCATCTTAGACATTTA+TGG | - | chr3_1:79945275-79945294 | None:intergenic | 30.0% | |
| AACATTTATAAGGTCTATGG+TGG | - | chr3_1:79945312-79945331 | None:intergenic | 30.0% | |
| CTGGAATAAAAAATTTGGGA+AGG | - | chr3_1:79945588-79945607 | None:intergenic | 30.0% | |
| AAAAATACGACATAAGAGGA+AGG | - | chr3_1:79945617-79945636 | None:intergenic | 30.0% | |
| ! | GATGGTTCAATTCTATGTTT+TGG | - | chr3_1:79945651-79945670 | None:intergenic | 30.0% |
| AACATAGAATTGAACCATCA+AGG | + | chr3_1:79945652-79945671 | Msa0379050:intron | 30.0% | |
| CTAAACACAAAAAACCTTGA+TGG | - | chr3_1:79945669-79945688 | None:intergenic | 30.0% | |
| AGATAAAGAAGAAAAGGAAG+AGG | + | chr3_1:79946079-79946098 | Msa0379050:intron | 30.0% | |
| GATATTAACCATTTGATTGC+AGG | - | chr3_1:79946171-79946190 | None:intergenic | 30.0% | |
| ACTAACAGAAAGGACTAATT+TGG | + | chr3_1:79946217-79946236 | Msa0379050:intron | 30.0% | |
| !! | AATACTCTACTTGCTATCAT+TGG | + | chr3_1:79946439-79946458 | Msa0379050:intron | 30.0% |
| !! | ATACTCTACTTGCTATCATT+GGG | + | chr3_1:79946440-79946459 | Msa0379050:intron | 30.0% |
| AAACACATATAAAGTTGACC+AGG | + | chr3_1:79946469-79946488 | Msa0379050:intron | 30.0% | |
| AACACATATAAAGTTGACCA+GGG | + | chr3_1:79946470-79946489 | Msa0379050:intron | 30.0% | |
| TTAATAGACCAAGAAAGGAT+AGG | - | chr3_1:79946582-79946601 | None:intergenic | 30.0% | |
| !! | GAAGAGTATCTTTATGTTGA+TGG | + | chr3_1:79946646-79946665 | Msa0379050:CDS | 30.0% |
| ! | GTATCTTTATGTTGATGGAA+TGG | + | chr3_1:79946651-79946670 | Msa0379050:CDS | 30.0% |
| ! | GACAATGCTATCAATGTTTT+CGG | + | chr3_1:79946808-79946827 | Msa0379050:CDS | 30.0% |
| !!! | GGTATTGTTTTTGCTTGTTA+TGG | + | chr3_1:79946832-79946851 | Msa0379050:CDS | 30.0% |
| ACACAAAACTACTTATAGGA+CGG | - | chr3_1:79947211-79947230 | None:intergenic | 30.0% | |
| ! | AAAAAGATGATGACGATTGC+GGG | - | chr3_1:79938537-79938556 | None:intergenic | 35.0% |
| ! | GAAAAAGATGATGACGATTG+CGG | - | chr3_1:79938538-79938557 | None:intergenic | 35.0% |
| ATTTCTATTTGACCAGGATG+CGG | + | chr3_1:79938952-79938971 | Msa0379050:intron | 35.0% | |
| GCTATTGTCAATATTGGATG+TGG | + | chr3_1:79939025-79939044 | Msa0379050:CDS | 35.0% | |
| ATGATCTGTGTAGGTGAAAT+GGG | + | chr3_1:79939318-79939337 | Msa0379050:intron | 35.0% | |
| !!! | GAAGGCATAGTTTTGACAAT+TGG | + | chr3_1:79939391-79939410 | Msa0379050:CDS | 35.0% |
| GAGGAAAATTGATGCTACAA+AGG | + | chr3_1:79939876-79939895 | Msa0379050:intron | 35.0% | |
| AAAGTCATAAACTTAAGCCC+GGG | - | chr3_1:79940048-79940067 | None:intergenic | 35.0% | |
| CAAAGTCATAAACTTAAGCC+CGG | - | chr3_1:79940049-79940068 | None:intergenic | 35.0% | |
| ACATTTCTCATAGAATCTCC+GGG | + | chr3_1:79940122-79940141 | Msa0379050:intron | 35.0% | |
| GATCCTTCTTTGAATCAGAA+GGG | - | chr3_1:79940181-79940200 | None:intergenic | 35.0% | |
| AGATCCTTCTTTGAATCAGA+AGG | - | chr3_1:79940182-79940201 | None:intergenic | 35.0% | |
| ATTATCTAATTCCGAGGTGA+GGG | - | chr3_1:79940245-79940264 | None:intergenic | 35.0% | |
| CCAAATAATATAACCCCAAC+AGG | - | chr3_1:79940412-79940431 | None:intergenic | 35.0% | |
| CCTGTTGGGGTTATATTATT+TGG | + | chr3_1:79940409-79940428 | Msa0379050:intron | 35.0% | |
| TGCCACCAAATCAAAATGTT+AGG | - | chr3_1:79940510-79940529 | None:intergenic | 35.0% | |
| TATGTACCCTTTACTACTAC+AGG | - | chr3_1:79941042-79941061 | None:intergenic | 35.0% | |
| TATTTGCTCAAGACAGAAAC+AGG | + | chr3_1:79941078-79941097 | Msa0379050:CDS | 35.0% | |
| TCAATCCTGATATCCTTTGA+CGG | - | chr3_1:79941240-79941259 | None:intergenic | 35.0% | |
| ! | TGCTAGTACAGTATTGGATA+CGG | + | chr3_1:79941527-79941546 | Msa0379050:intron | 35.0% |
| GTATTGCTTCCAATTCTTCT+CGG | + | chr3_1:79941645-79941664 | Msa0379050:intron | 35.0% | |
| ATGCACAAACACATAAAAGC+GGG | - | chr3_1:79941672-79941691 | None:intergenic | 35.0% | |
| CATGCACAAACACATAAAAG+CGG | - | chr3_1:79941673-79941692 | None:intergenic | 35.0% | |
| GGCTGAAAAAAAACATATGC+AGG | - | chr3_1:79941712-79941731 | None:intergenic | 35.0% | |
| TTCCTGCAGCAAAATCAATT+GGG | - | chr3_1:79941811-79941830 | None:intergenic | 35.0% | |
| TTTCCTGCAGCAAAATCAAT+TGG | - | chr3_1:79941812-79941831 | None:intergenic | 35.0% | |
| TTTCATGTTGCCTTCTCAAA+TGG | + | chr3_1:79941839-79941858 | Msa0379050:CDS | 35.0% | |
| ATGTGAAACACCATTTGAGA+AGG | - | chr3_1:79941852-79941871 | None:intergenic | 35.0% | |
| TCAAATGGTGTTTCACATGT+GGG | + | chr3_1:79941854-79941873 | Msa0379050:CDS | 35.0% | |
| ACAAATCCGATTGTTCAACA+TGG | + | chr3_1:79941909-79941928 | Msa0379050:CDS | 35.0% | |
| AGTTAGCCATGTTGAACAAT+CGG | - | chr3_1:79941918-79941937 | None:intergenic | 35.0% | |
| AGAATAGTTTGACCATCAAG+AGG | - | chr3_1:79941965-79941984 | None:intergenic | 35.0% | |
| CCTTAATGAAAGGAACTTGT+AGG | - | chr3_1:79942034-79942053 | None:intergenic | 35.0% | |
| CCTACAAGTTCCTTTCATTA+AGG | + | chr3_1:79942031-79942050 | Msa0379050:intron | 35.0% | |
| !! | CACAAGTATTTTTGTCGATC+AGG | - | chr3_1:79942173-79942192 | None:intergenic | 35.0% |
| GATCGACAAAAATACTTGTG+CGG | + | chr3_1:79942173-79942192 | Msa0379050:intron | 35.0% | |
| ATCGACAAAAATACTTGTGC+GGG | + | chr3_1:79942174-79942193 | Msa0379050:intron | 35.0% | |
| GATTGATAAGTTAGGATCAG+AGG | + | chr3_1:79942217-79942236 | Msa0379050:intron | 35.0% | |
| ! | TTGGAAACAATGAGTTGAAG+AGG | + | chr3_1:79942335-79942354 | Msa0379050:intron | 35.0% |
| ! | TCAGGTCTTGATAAGTTGAA+GGG | - | chr3_1:79942426-79942445 | None:intergenic | 35.0% |
| TGAGGATAAACTTGAAAGTG+AGG | + | chr3_1:79942483-79942502 | Msa0379050:intron | 35.0% | |
| AGTGGTAAGAATAACATCCT+TGG | + | chr3_1:79942584-79942603 | Msa0379050:intron | 35.0% | |
| AAAATGACGAGCACTTTGTT+CGG | - | chr3_1:79942627-79942646 | None:intergenic | 35.0% | |
| TTGTGATGAGTGGTTAGTAA+GGG | - | chr3_1:79942659-79942678 | None:intergenic | 35.0% | |
| ATTGTGATGAGTGGTTAGTA+AGG | - | chr3_1:79942660-79942679 | None:intergenic | 35.0% | |
| CAAATTGGTATTCAAGAGCT+TGG | + | chr3_1:79942727-79942746 | Msa0379050:intron | 35.0% | |
| ACTAGGTTCAACTAGTAAAC+CGG | - | chr3_1:79942802-79942821 | None:intergenic | 35.0% | |
| !! | TAAAACTGACTTGGATCAGT+CGG | - | chr3_1:79942966-79942985 | None:intergenic | 35.0% |
| TGGAAATGCACATTGTATTG+TGG | + | chr3_1:79943019-79943038 | Msa0379050:intron | 35.0% | |
| GGAAATGCACATTGTATTGT+GGG | + | chr3_1:79943020-79943039 | Msa0379050:intron | 35.0% | |
| TCCATAATCATCAAACAAGC+GGG | - | chr3_1:79943078-79943097 | None:intergenic | 35.0% | |
| CCATCATGATCAGTATCAAT+AGG | - | chr3_1:79943312-79943331 | None:intergenic | 35.0% | |
| CCTATTGATACTGATCATGA+TGG | + | chr3_1:79943309-79943328 | Msa0379050:intron | 35.0% | |
| CTCACCAACTTTCCAAAATT+TGG | + | chr3_1:79943519-79943538 | Msa0379050:intron | 35.0% | |
| TCTGAGTGTAATGGTCATAT+GGG | + | chr3_1:79943892-79943911 | Msa0379050:intron | 35.0% | |
| ! | TCTATTTCTTACACCCTGTT+TGG | - | chr3_1:79944111-79944130 | None:intergenic | 35.0% |
| AAACAGGGTGTAAGAAATAG+AGG | + | chr3_1:79944110-79944129 | Msa0379050:intron | 35.0% | |
| AACAGGGTGTAAGAAATAGA+GGG | + | chr3_1:79944111-79944130 | Msa0379050:intron | 35.0% | |
| AATAAAACAACCCATGCTCT+AGG | + | chr3_1:79944163-79944182 | Msa0379050:intron | 35.0% | |
| TGATAGAATCTCATTTGAGG+TGG | + | chr3_1:79944363-79944382 | Msa0379050:intron | 35.0% | |
| ATCGATAAAGAGGATAGATG+AGG | + | chr3_1:79944415-79944434 | Msa0379050:intron | 35.0% | |
| GTAGTCTAATAACTAGAGGT+AGG | + | chr3_1:79944444-79944463 | Msa0379050:intron | 35.0% | |
| TTGATATCAGCTGTTGAACA+TGG | - | chr3_1:79944730-79944749 | None:intergenic | 35.0% | |
| CAGCTGATATCAATTTGTCT+TGG | + | chr3_1:79944737-79944756 | Msa0379050:intron | 35.0% | |
| CAATTTGTCTTGGCTAGATT+AGG | + | chr3_1:79944747-79944766 | Msa0379050:intron | 35.0% | |
| TTGATAAACCATGCCATGAT+GGG | + | chr3_1:79944909-79944928 | Msa0379050:intron | 35.0% | |
| !! | GCTTCGATATTTTGAGTGTT+AGG | + | chr3_1:79944958-79944977 | Msa0379050:intron | 35.0% |
| GCAAACGGAGATGAAATTAA+AGG | - | chr3_1:79946239-79946258 | None:intergenic | 35.0% | |
| CTAAGATGAACCAACATTAG+AGG | + | chr3_1:79945282-79945301 | Msa0379050:intron | 35.0% | |
| ! | AGAGAACCATTGGATTTTGA+AGG | + | chr3_1:79945365-79945384 | Msa0379050:intron | 35.0% |
| CATAGACCTTCAAAATCCAA+TGG | - | chr3_1:79945374-79945393 | None:intergenic | 35.0% | |
| AGGTCTATGAGATCTATCAA+TGG | + | chr3_1:79945385-79945404 | Msa0379050:intron | 35.0% | |
| !! | AAGATGATGGAGAAGAACAA+GGG | - | chr3_1:79945454-79945473 | None:intergenic | 35.0% |
| ! | AGGTATTGTGAAGAAGATGA+TGG | - | chr3_1:79945467-79945486 | None:intergenic | 35.0% |
| ! | TTCTTCTGGGTTTTTGATGA+AGG | - | chr3_1:79945487-79945506 | None:intergenic | 35.0% |
| ! | TTTTGCCTTGAGTTCAAAAC+TGG | + | chr3_1:79945763-79945782 | Msa0379050:intron | 35.0% |
| AATGAATAGGATATAGGCCA+TGG | + | chr3_1:79945950-79945969 | Msa0379050:intron | 35.0% | |
| ATGAATAGGATATAGGCCAT+GGG | + | chr3_1:79945951-79945970 | Msa0379050:intron | 35.0% | |
| AAAGAAGAAAAGGAAGAGGA+AGG | + | chr3_1:79946083-79946102 | Msa0379050:intron | 35.0% | |
| !! | TGAAAAAAATCAGGTGTTGG+TGG | + | chr3_1:79946124-79946143 | Msa0379050:intron | 35.0% |
| ACAATAGACCTGCAATCAAA+TGG | + | chr3_1:79946160-79946179 | Msa0379050:intron | 35.0% | |
| GAAAGGACTAATTTGGCAAA+CGG | + | chr3_1:79946224-79946243 | Msa0379050:intron | 35.0% | |
| GCAAACGGAGATGAAATTAA+AGG | + | chr3_1:79946239-79946258 | Msa0379050:intron | 35.0% | |
| TCTCTTCAAATTGTTGCCAT+TGG | + | chr3_1:79946495-79946514 | Msa0379050:intron | 35.0% | |
| AAGAAAGGATAGGTAAACAG+GGG | - | chr3_1:79946572-79946591 | None:intergenic | 35.0% | |
| CAAGAAAGGATAGGTAAACA+GGG | - | chr3_1:79946573-79946592 | None:intergenic | 35.0% | |
| AGGGATTAATAGACCAAGAA+AGG | - | chr3_1:79946587-79946606 | None:intergenic | 35.0% | |
| !! | AGTTTTCATGTTTTGGACAG+AGG | + | chr3_1:79946619-79946638 | Msa0379050:intron | 35.0% |
| ATGCAACATTAGGATCTGAA+TGG | - | chr3_1:79946708-79946727 | None:intergenic | 35.0% | |
| AATGAAGCTGATGCAACATT+AGG | - | chr3_1:79946718-79946737 | None:intergenic | 35.0% | |
| ! | AATGCTATCAATGTTTTCGG+TGG | + | chr3_1:79946811-79946830 | Msa0379050:CDS | 35.0% |
| TGGAAAATTCTCCAAGAAAG+GGG | - | chr3_1:79946899-79946918 | None:intergenic | 35.0% | |
| CTGGAAAATTCTCCAAGAAA+GGG | - | chr3_1:79946900-79946919 | None:intergenic | 35.0% | |
| !! | AATGTTTTGTGGTGGAGAAA+TGG | + | chr3_1:79946936-79946955 | Msa0379050:CDS | 35.0% |
| ACATGCAAAAAGCAACTGAT+GGG | - | chr3_1:79947006-79947025 | None:intergenic | 35.0% | |
| AACATGCAAAAAGCAACTGA+TGG | - | chr3_1:79947007-79947026 | None:intergenic | 35.0% | |
| ! | AAATGTACACTGCTAGTTTG+AGG | + | chr3_1:79947105-79947124 | Msa0379050:three_prime_UTR | 35.0% |
| TTGTCGTGATTGTATCACAT+GGG | + | chr3_1:79947172-79947191 | Msa0379050:three_prime_UTR | 35.0% | |
| TCTACAAGTGAAAAGCTAAG+TGG | + | chr3_1:79947288-79947307 | Msa0379050:three_prime_UTR | 35.0% | |
| CTACAAGTGAAAAGCTAAGT+GGG | + | chr3_1:79947289-79947308 | Msa0379050:three_prime_UTR | 35.0% | |
| TACAAGTGAAAAGCTAAGTG+GGG | + | chr3_1:79947290-79947309 | Msa0379050:three_prime_UTR | 35.0% | |
| CAAATACAGCAACAAAGTTG+CGG | - | chr3_1:79947336-79947355 | None:intergenic | 35.0% | |
| TCGAATTCGAACCACAACAA+TGG | + | chr3_1:79938629-79938648 | Msa0379050:exon | 40.0% | |
| AATTCGAACCACAACAATGG+AGG | + | chr3_1:79938632-79938651 | Msa0379050:exon | 40.0% | |
| ! | ATCGATTGAGGATTTTCCTC+TGG | - | chr3_1:79938691-79938710 | None:intergenic | 40.0% |
| GAAGTCTGGAGAAAATGTTG+TGG | - | chr3_1:79938752-79938771 | None:intergenic | 40.0% | |
| CAACTTGCGTTAACAACTCA+TGG | + | chr3_1:79938793-79938812 | Msa0379050:CDS | 40.0% | |
| GAGTTCTATTAGGACTTACG+CGG | - | chr3_1:79938887-79938906 | None:intergenic | 40.0% | |
| CTAGTTGTGCGAGTTCTATT+AGG | - | chr3_1:79938897-79938916 | None:intergenic | 40.0% | |
| CTAATAGAACTCGCACAACT+AGG | + | chr3_1:79938895-79938914 | Msa0379050:intron | 40.0% | |
| GGTGAATGAAGTTGTCGATA+AGG | + | chr3_1:79938973-79938992 | Msa0379050:CDS | 40.0% | |
| ATAGCAAAGTACGGTCGAAT+TGG | - | chr3_1:79939010-79939029 | None:intergenic | 40.0% | |
| TTGATCCGAACAAGATTCTG+AGG | + | chr3_1:79939050-79939069 | Msa0379050:CDS | 40.0% | |
| ACAAGCCTCAGAATCTTGTT+CGG | - | chr3_1:79939058-79939077 | None:intergenic | 40.0% | |
| TGATTTAATTCCAACGGTGC+AGG | + | chr3_1:79939133-79939152 | Msa0379050:intron | 40.0% | |
| GAGAGTAGGGTTCAATATTC+CGG | + | chr3_1:79939163-79939182 | Msa0379050:CDS | 40.0% | |
| CAATATTCCGGTGGTTGTTA+CGG | + | chr3_1:79939175-79939194 | Msa0379050:CDS | 40.0% | |
| TTATTCACCGTAACAACCAC+CGG | - | chr3_1:79939185-79939204 | None:intergenic | 40.0% | |
| GTGGTTGTTACGGTGAATAA+TGG | + | chr3_1:79939185-79939204 | Msa0379050:CDS | 40.0% | |
| GTCATGTGTAAATCTGAGTG+AGG | + | chr3_1:79939295-79939314 | Msa0379050:intron | 40.0% | |
| GATGATCTGTGTAGGTGAAA+TGG | + | chr3_1:79939317-79939336 | Msa0379050:intron | 40.0% | |
| TGATCTGTGTAGGTGAAATG+GGG | + | chr3_1:79939319-79939338 | Msa0379050:intron | 40.0% | |
| !! | AAATGGGGTGCTCTTTTTAG+TGG | + | chr3_1:79939334-79939353 | Msa0379050:CDS | 40.0% |
| ATAGCTTCAACTTTCAGTCC+TGG | - | chr3_1:79939424-79939443 | None:intergenic | 40.0% | |
| ACCTTTGCTGGTCGTATTAT+CGG | - | chr3_1:79939448-79939467 | None:intergenic | 40.0% | |
| !! | AAAGCCAGTTGGTAGCTTAA+GGG | - | chr3_1:79939595-79939614 | None:intergenic | 40.0% |
| !! | TAAAGCCAGTTGGTAGCTTA+AGG | - | chr3_1:79939596-79939615 | None:intergenic | 40.0% |
| ! | AAGGCATTACTAAAGCCAGT+TGG | - | chr3_1:79939606-79939625 | None:intergenic | 40.0% |
| !! | CTGGCTTTAGTAATGCCTTA+AGG | + | chr3_1:79939607-79939626 | Msa0379050:intron | 40.0% |
| TAGTAATGCCTTAAGGCAAG+AGG | + | chr3_1:79939614-79939633 | Msa0379050:intron | 40.0% | |
| !!! | CTGCTACTTTTCAGATTGAG+TGG | - | chr3_1:79939714-79939733 | None:intergenic | 40.0% |
| GAGGGAAATATTCAAGCTTG+AGG | + | chr3_1:79939857-79939876 | Msa0379050:intron | 40.0% | |
| ! | TAGATATTGACTGCTAACCC+CGG | + | chr3_1:79940027-79940046 | Msa0379050:intron | 40.0% |
| AAGTCATAAACTTAAGCCCG+GGG | - | chr3_1:79940047-79940066 | None:intergenic | 40.0% | |
| AATCATGCGATCATAACACC+CGG | - | chr3_1:79940143-79940162 | None:intergenic | 40.0% | |
| TCTCCCTTCTGATTCAAAGA+AGG | + | chr3_1:79940175-79940194 | Msa0379050:intron | 40.0% | |
| AAAACTTCACCACTAGCAAG+AGG | + | chr3_1:79940210-79940229 | Msa0379050:intron | 40.0% | |
| CATTATCTAATTCCGAGGTG+AGG | - | chr3_1:79940246-79940265 | None:intergenic | 40.0% | |
| CATCGCATTATCTAATTCCG+AGG | - | chr3_1:79940251-79940270 | None:intergenic | 40.0% | |
| CTATCAACACATGGTTCTTG+AGG | - | chr3_1:79940337-79940356 | None:intergenic | 40.0% | |
| ATATAACCCCAACAGGGAAT+TGG | - | chr3_1:79940405-79940424 | None:intergenic | 40.0% | |
| !!! | ACATTTTGATTTGGTGGCAC+AGG | + | chr3_1:79940511-79940530 | Msa0379050:intron | 40.0% |
| AAACTGGTCATGGAGAAGTT+GGG | + | chr3_1:79940551-79940570 | Msa0379050:CDS | 40.0% | |
| TTCAGATTATGCCATGCCTA+TGG | + | chr3_1:79940950-79940969 | Msa0379050:intron | 40.0% | |
| AGCAGTTGCATGCATTACAT+TGG | - | chr3_1:79941152-79941171 | None:intergenic | 40.0% | |
| TTTGACGGTTTGACTCTTAG+AGG | - | chr3_1:79941225-79941244 | None:intergenic | 40.0% | |
| TCTAAGAGTCAAACCGTCAA+AGG | + | chr3_1:79941224-79941243 | Msa0379050:intron | 40.0% | |
| TCAAACCGTCAAAGGATATC+AGG | + | chr3_1:79941232-79941251 | Msa0379050:intron | 40.0% | |
| ! | TTGCTTCTTTTTCTTGCGAC+AGG | + | chr3_1:79941455-79941474 | Msa0379050:intron | 40.0% |
| ! | TGCTTCTTTTTCTTGCGACA+GGG | + | chr3_1:79941456-79941475 | Msa0379050:intron | 40.0% |
| TAGGTAGCTTTCTAGACTAG+TGG | - | chr3_1:79941603-79941622 | None:intergenic | 40.0% | |
| !! | TTCCCAATTGATTTTGCTGC+AGG | + | chr3_1:79941806-79941825 | Msa0379050:intron | 40.0% |
| CTCAAATGGTGTTTCACATG+TGG | + | chr3_1:79941853-79941872 | Msa0379050:CDS | 40.0% | |
| AACATGGCTAACTGCCAAAA+GGG | + | chr3_1:79941925-79941944 | Msa0379050:CDS | 40.0% | |
| AATGTTCGATACTACCAGGA+AGG | + | chr3_1:79942060-79942079 | Msa0379050:intron | 40.0% | |
| TCGACAAAAATACTTGTGCG+GGG | + | chr3_1:79942175-79942194 | Msa0379050:intron | 40.0% | |
| TTAGGATCAGAGGGAATAAG+AGG | + | chr3_1:79942227-79942246 | Msa0379050:intron | 40.0% | |
| !! | CAGTTACATCGGCTCATATT+TGG | + | chr3_1:79942316-79942335 | Msa0379050:intron | 40.0% |
| ! | CTCAGGTCTTGATAAGTTGA+AGG | - | chr3_1:79942427-79942446 | None:intergenic | 40.0% |
| CTTCAACTTATCAAGACCTG+AGG | + | chr3_1:79942425-79942444 | Msa0379050:intron | 40.0% | |
| ! | TCCCGCTTGTTTGATGATTA+TGG | + | chr3_1:79943074-79943093 | Msa0379050:intron | 40.0% |
| TAGATGCTCAACTAGGCTAT+TGG | - | chr3_1:79943211-79943230 | None:intergenic | 40.0% | |
| GCATGTTTAGATGCTCAACT+AGG | - | chr3_1:79943218-79943237 | None:intergenic | 40.0% | |
| TTGAGCATCTAAACATGCCT+AGG | + | chr3_1:79943220-79943239 | Msa0379050:intron | 40.0% | |
| ! | GTTTGTCGTCACATTTTCTG+AGG | - | chr3_1:79943336-79943355 | None:intergenic | 40.0% |
| !! | GCTGCCAAATTTTGGAAAGT+TGG | - | chr3_1:79943526-79943545 | None:intergenic | 40.0% |
| ACTTTCCAAAATTTGGCAGC+TGG | + | chr3_1:79943526-79943545 | Msa0379050:intron | 40.0% | |
| ! | ATTCTCCAGCTGCCAAATTT+TGG | - | chr3_1:79943534-79943553 | None:intergenic | 40.0% |
| AAGCATAGGAAAGTCTCCAT+TGG | + | chr3_1:79943590-79943609 | Msa0379050:CDS | 40.0% | |
| GCAATACAAGTTCTTGGCAT+TGG | - | chr3_1:79943626-79943645 | None:intergenic | 40.0% | |
| TATTGCATATCATGGCGTTG+TGG | + | chr3_1:79943640-79943659 | Msa0379050:CDS | 40.0% | |
| ATTGCATATCATGGCGTTGT+GGG | + | chr3_1:79943641-79943660 | Msa0379050:CDS | 40.0% | |
| TCAGACTTGTGACTGAAACT+AGG | + | chr3_1:79943804-79943823 | Msa0379050:intron | 40.0% | |
| ACTGAGTACTCTGAGTGTAA+TGG | + | chr3_1:79943883-79943902 | Msa0379050:intron | 40.0% | |
| CTCTGAGTGTAATGGTCATA+TGG | + | chr3_1:79943891-79943910 | Msa0379050:intron | 40.0% | |
| TTTCAGTTATGCTTAGTCGG+TGG | - | chr3_1:79943947-79943966 | None:intergenic | 40.0% | |
| TAATGTGCTGTCATGTACAC+TGG | + | chr3_1:79944003-79944022 | Msa0379050:intron | 40.0% | |
| AATGACAGGAAGATAGAGTG+AGG | + | chr3_1:79944070-79944089 | Msa0379050:intron | 40.0% | |
| TCAATACCATATGGCATCAC+AGG | - | chr3_1:79944219-79944238 | None:intergenic | 40.0% | |
| GAGAACACTGCAATTGATCT+AGG | + | chr3_1:79944266-79944285 | Msa0379050:intron | 40.0% | |
| ! | GAATCTCATTTGAGGTGGTT+TGG | + | chr3_1:79944368-79944387 | Msa0379050:intron | 40.0% |
| GACCCAAAGAATCGATAAAG+AGG | + | chr3_1:79944405-79944424 | Msa0379050:intron | 40.0% | |
| GATAAAGAGGATAGATGAGG+TGG | + | chr3_1:79944418-79944437 | Msa0379050:intron | 40.0% | |
| GAGGGTAGTCTAATAACTAG+AGG | + | chr3_1:79944440-79944459 | Msa0379050:intron | 40.0% | |
| AAGGTATACAAAGTGAAGGG+TGG | + | chr3_1:79944504-79944523 | Msa0379050:intron | 40.0% | |
| ! | GTTGATAAACCATGCCATGA+TGG | + | chr3_1:79944908-79944927 | Msa0379050:intron | 40.0% |
| ATTATGCATGTTGCCCATCA+TGG | - | chr3_1:79944925-79944944 | None:intergenic | 40.0% | |
| CATAACAGAAAGGACCAGTT+TGG | - | chr3_1:79945246-79945265 | None:intergenic | 40.0% | |
| AGATGAACCAACATTAGAGG+TGG | + | chr3_1:79945285-79945304 | Msa0379050:intron | 40.0% | |
| !! | AGATGATGGAGAAGAACAAG+GGG | - | chr3_1:79945453-79945472 | None:intergenic | 40.0% |
| !! | GAAGATGATGGAGAAGAACA+AGG | - | chr3_1:79945455-79945474 | None:intergenic | 40.0% |
| ! | GTGTTTAGTTTATGGGCATC+TGG | + | chr3_1:79945681-79945700 | Msa0379050:intron | 40.0% |
| !!! | TGTTAGCCTTTTGCCTCTTT+TGG | + | chr3_1:79945740-79945759 | Msa0379050:intron | 40.0% |
| GCAAAACCAAAAGAGGCAAA+AGG | - | chr3_1:79945749-79945768 | None:intergenic | 40.0% | |
| ACTCAAGGCAAAACCAAAAG+AGG | - | chr3_1:79945756-79945775 | None:intergenic | 40.0% | |
| ! | TTTAGCCTTTCGGCTTGTAA+TGG | + | chr3_1:79945790-79945809 | Msa0379050:intron | 40.0% |
| TGAATCCATTACAAGCCGAA+AGG | - | chr3_1:79945798-79945817 | None:intergenic | 40.0% | |
| ATCAAAAGGAACTCCTCTCA+TGG | - | chr3_1:79945991-79946010 | None:intergenic | 40.0% | |
| GGAAAGTGGAAGGGAAAAAA+TGG | - | chr3_1:79946411-79946430 | None:intergenic | 40.0% | |
| AACAATTTGAAGAGATGCCC+TGG | - | chr3_1:79946490-79946509 | None:intergenic | 40.0% | |
| CCAAGAAAGGATAGGTAAAC+AGG | - | chr3_1:79946574-79946593 | None:intergenic | 40.0% | |
| CCTGTTTACCTATCCTTTCT+TGG | + | chr3_1:79946571-79946590 | Msa0379050:intron | 40.0% | |
| TGCATCAGCTTCATTAACTG+AGG | + | chr3_1:79946723-79946742 | Msa0379050:CDS | 40.0% | |
| !! | TTAAGTTGGGGAGAAATTCC+AGG | + | chr3_1:79946767-79946786 | Msa0379050:CDS | 40.0% |
| CCTGGAAAATTCTCCAAGAA+AGG | - | chr3_1:79946901-79946920 | None:intergenic | 40.0% | |
| ! | CCTTTCTTGGAGAATTTTCC+AGG | + | chr3_1:79946898-79946917 | Msa0379050:CDS | 40.0% |
| AGACCAATCATAGTGGTACA+AGG | - | chr3_1:79946967-79946986 | None:intergenic | 40.0% | |
| TGGACATAGACCAATCATAG+TGG | - | chr3_1:79946974-79946993 | None:intergenic | 40.0% | |
| AGCATCTAATGATCCACAGA+GGG | - | chr3_1:79947066-79947085 | None:intergenic | 40.0% | |
| ! | TTTTCCATTTGCCATGCACA+TGG | + | chr3_1:79947138-79947157 | Msa0379050:three_prime_UTR | 40.0% |
| CTTGTCGTGATTGTATCACA+TGG | + | chr3_1:79947171-79947190 | Msa0379050:three_prime_UTR | 40.0% | |
| TGCTTCAGAAGATGTGAAGT+CGG | - | chr3_1:79947263-79947282 | None:intergenic | 40.0% | |
| ! | GATCGCGATGATGATGAACA+CGG | - | chr3_1:79938663-79938682 | None:intergenic | 45.0% |
| ! | GATTGAGGATTTTCCTCTGG+AGG | - | chr3_1:79938688-79938707 | None:intergenic | 45.0% |
| AGTTGCAGAAGCGAAGGATA+TGG | - | chr3_1:79938778-79938797 | None:intergenic | 45.0% | |
| ! | AGGATTGAGAGAAAGTGCAG+AGG | - | chr3_1:79938859-79938878 | None:intergenic | 45.0% |
| AGTAGGGTTCAATATTCCGG+TGG | + | chr3_1:79939166-79939185 | Msa0379050:CDS | 45.0% | |
| TGAGTGAGGATGATCTGTGT+AGG | + | chr3_1:79939309-79939328 | Msa0379050:intron | 45.0% | |
| !! | GGTGCTCTTTTTAGTGGCAT+TGG | + | chr3_1:79939340-79939359 | Msa0379050:CDS | 45.0% |
| TTGACAATTGGCTGTTTGCC+AGG | + | chr3_1:79939403-79939422 | Msa0379050:CDS | 45.0% | |
| ACCGATAATACGACCAGCAA+AGG | + | chr3_1:79939444-79939463 | Msa0379050:CDS | 45.0% | |
| ! | CTTTTGCACGAGACTACCTT+TGG | - | chr3_1:79939569-79939588 | None:intergenic | 45.0% |
| CAAAGGTAGTCTCGTGCAAA+AGG | + | chr3_1:79939567-79939586 | Msa0379050:intron | 45.0% | |
| TAATGCCTTAAGGCAAGAGG+TGG | + | chr3_1:79939617-79939636 | Msa0379050:intron | 45.0% | |
| AGAGGTGGCTTACTGAACTA+AGG | + | chr3_1:79939632-79939651 | Msa0379050:intron | 45.0% | |
| AGTAGCAGAGTCCCAAAGAT+TGG | + | chr3_1:79939726-79939745 | Msa0379050:intron | 45.0% | |
| ! | AGATATTGACTGCTAACCCC+GGG | + | chr3_1:79940028-79940047 | Msa0379050:intron | 45.0% |
| !! | AAGGGTATTCCTCTTGCTAG+TGG | - | chr3_1:79940222-79940241 | None:intergenic | 45.0% |
| AGCAAGCAGTGACATGAAAC+TGG | + | chr3_1:79940535-79940554 | Msa0379050:CDS | 45.0% | |
| CAGTGACATGAAACTGGTCA+TGG | + | chr3_1:79940541-79940560 | Msa0379050:CDS | 45.0% | |
| GAAACTGGTCATGGAGAAGT+TGG | + | chr3_1:79940550-79940569 | Msa0379050:CDS | 45.0% | |
| GGATGCTCTGTATTCAGATG+TGG | + | chr3_1:79940999-79941018 | Msa0379050:CDS | 45.0% | |
| AGACACGCCTGTAGTAGTAA+AGG | + | chr3_1:79941032-79941051 | Msa0379050:CDS | 45.0% | |
| GACACGCCTGTAGTAGTAAA+GGG | + | chr3_1:79941033-79941052 | Msa0379050:CDS | 45.0% | |
| CAAGACAGAAACAGGTCTTC+TGG | + | chr3_1:79941086-79941105 | Msa0379050:CDS | 45.0% | |
| TGTGGCAAGAGCGAAGAAAA+GGG | - | chr3_1:79941124-79941143 | None:intergenic | 45.0% | |
| ATGTGGCAAGAGCGAAGAAA+AGG | - | chr3_1:79941125-79941144 | None:intergenic | 45.0% | |
| TCCATTATAAAAGGGCAGCC+CGG | + | chr3_1:79941390-79941409 | Msa0379050:intron | 45.0% | |
| ACAAAGCTCCTGCATATGCA+GGG | + | chr3_1:79941416-79941435 | Msa0379050:intron | 45.0% | |
| AGAAGCAATATACCCCTTCC+CGG | - | chr3_1:79941443-79941462 | None:intergenic | 45.0% | |
| ! | TTTTCTTGCGACAGGGATCT+AGG | + | chr3_1:79941463-79941482 | Msa0379050:intron | 45.0% |
| AGGGATCTAGGTGAGATGTT+GGG | + | chr3_1:79941475-79941494 | Msa0379050:intron | 45.0% | |
| AATGGTGTTTCACATGTGGG+TGG | + | chr3_1:79941857-79941876 | Msa0379050:CDS | 45.0% | |
| CAACATGGCTAACTGCCAAA+AGG | + | chr3_1:79941924-79941943 | Msa0379050:CDS | 45.0% | |
| CGGGGATAATACAGCTGTAT+TGG | + | chr3_1:79942193-79942212 | Msa0379050:intron | 45.0% | |
| GAGGGAATAAGAGGTGGAAT+TGG | + | chr3_1:79942236-79942255 | Msa0379050:intron | 45.0% | |
| AGCACTTTGTTCGGCTATTC+GGG | - | chr3_1:79942618-79942637 | None:intergenic | 45.0% | |
| GAGCACTTTGTTCGGCTATT+CGG | - | chr3_1:79942619-79942638 | None:intergenic | 45.0% | |
| GTTGAACCTAGTGTTGTCCA+TGG | + | chr3_1:79942810-79942829 | Msa0379050:intron | 45.0% | |
| GGCACTGTCGAATCAGATTA+TGG | + | chr3_1:79942869-79942888 | Msa0379050:intron | 45.0% | |
| GGCAAAAACTCCTGCCATAT+CGG | + | chr3_1:79942890-79942909 | Msa0379050:intron | 45.0% | |
| CTGCCATATCGGCCAAAATT+GGG | + | chr3_1:79942901-79942920 | Msa0379050:intron | 45.0% | |
| !! | TTGCCCAATTTTGGCCGATA+TGG | - | chr3_1:79942907-79942926 | None:intergenic | 45.0% |
| !!! | CGGAGGTATTTGCCCAATTT+TGG | - | chr3_1:79942916-79942935 | None:intergenic | 45.0% |
| AACATGCCTAGGCTGTAATC+TGG | + | chr3_1:79943231-79943250 | Msa0379050:intron | 45.0% | |
| AGCCTCCTGAGTTGTACATT+GGG | + | chr3_1:79943561-79943580 | Msa0379050:CDS | 45.0% | |
| ACATTGGGGTGACTAAGCAT+AGG | + | chr3_1:79943576-79943595 | Msa0379050:CDS | 45.0% | |
| TTGCATATCATGGCGTTGTG+GGG | + | chr3_1:79943642-79943661 | Msa0379050:CDS | 45.0% | |
| CTGAAACTAGGAGAGAGAGA+AGG | + | chr3_1:79943816-79943835 | Msa0379050:intron | 45.0% | |
| CCAACCATCAGATCCAAACA+GGG | + | chr3_1:79944095-79944114 | Msa0379050:intron | 45.0% | |
| TACACCCTGTTTGGATCTGA+TGG | - | chr3_1:79944102-79944121 | None:intergenic | 45.0% | |
| GTAAGACCTGTGATGCCATA+TGG | + | chr3_1:79944210-79944229 | Msa0379050:intron | 45.0% | |
| AAAGAGGATAGATGAGGTGG+AGG | + | chr3_1:79944421-79944440 | Msa0379050:intron | 45.0% | |
| AAGAGGATAGATGAGGTGGA+GGG | + | chr3_1:79944422-79944441 | Msa0379050:intron | 45.0% | |
| CAAAGTGAAGGGTGGTCTAA+TGG | + | chr3_1:79944512-79944531 | Msa0379050:intron | 45.0% | |
| AGTGTGTTATGCGCTTCATG+CGG | + | chr3_1:79944651-79944670 | Msa0379050:intron | 45.0% | |
| GCAGAGTGGATGAGATGATT+GGG | - | chr3_1:79944708-79944727 | None:intergenic | 45.0% | |
| ! | GGTGGGCAACTTTTCCTTTT+AGG | + | chr3_1:79945120-79945139 | Msa0379050:intron | 45.0% |
| TTCATCTCCGTTTGCCAAAC+TGG | + | chr3_1:79945229-79945248 | Msa0379050:intron | 45.0% | |
| GAAAGGACCAGTTTGGCAAA+CGG | - | chr3_1:79945239-79945258 | None:intergenic | 45.0% | |
| CATAAGAGGAAGGAAGATGC+TGG | - | chr3_1:79945607-79945626 | None:intergenic | 45.0% | |
| TGCCTTGAGTTCAAAACTGG+TGG | + | chr3_1:79945766-79945785 | Msa0379050:intron | 45.0% | |
| GCCTTGAGTTCAAAACTGGT+GGG | + | chr3_1:79945767-79945786 | Msa0379050:intron | 45.0% | |
| !!! | ACCCACCAGTTTTGAACTCA+AGG | - | chr3_1:79945771-79945790 | None:intergenic | 45.0% |
| !! | AACTGGTGGGTTTAGCCTTT+CGG | + | chr3_1:79945780-79945799 | Msa0379050:intron | 45.0% |
| GAGGAGTAACTAGCCAAATC+TGG | + | chr3_1:79945916-79945935 | Msa0379050:intron | 45.0% | |
| ! | TTGTTGCCATTGGTGCCTTT+AGG | + | chr3_1:79946505-79946524 | Msa0379050:intron | 45.0% |
| GATGGAATGGGCATCAAAAC+AGG | + | chr3_1:79946664-79946683 | Msa0379050:CDS | 45.0% | |
| !!! | GTTTTTGCTTGTTATGGCCG+CGG | + | chr3_1:79946838-79946857 | Msa0379050:CDS | 45.0% |
| !!! | GAATTTTCCAGGAGTGCCAT+TGG | + | chr3_1:79946909-79946928 | Msa0379050:CDS | 45.0% |
| CCACAAAACATTCCAGCCAA+TGG | - | chr3_1:79946928-79946947 | None:intergenic | 45.0% | |
| !! | CCATTGGCTGGAATGTTTTG+TGG | + | chr3_1:79946925-79946944 | Msa0379050:CDS | 45.0% |
| ! | TTGGCTGGAATGTTTTGTGG+TGG | + | chr3_1:79946928-79946947 | Msa0379050:CDS | 45.0% |
| CGTCCTTGTACCACTATGAT+TGG | + | chr3_1:79946961-79946980 | Msa0379050:CDS | 45.0% | |
| ATCTAATGATCCACAGAGGG+AGG | - | chr3_1:79947063-79947082 | None:intergenic | 45.0% | |
| CAGCATCTAATGATCCACAG+AGG | - | chr3_1:79947067-79947086 | None:intergenic | 45.0% | |
| ! | TGTACACTGCTAGTTTGAGG+AGG | + | chr3_1:79947108-79947127 | Msa0379050:three_prime_UTR | 45.0% |
| TAGTCCATGTGCATGGCAAA+TGG | - | chr3_1:79947145-79947164 | None:intergenic | 45.0% | |
| GATAGTCTAGTCCATGTGCA+TGG | - | chr3_1:79947152-79947171 | None:intergenic | 45.0% | |
| !! | TATAAAAATAAAATCAATAT+CGG | - | chr3_1:79940461-79940480 | None:intergenic | 5.0% |
| !! | ATGAATTATAAAATAAAATT+AGG | - | chr3_1:79945421-79945440 | None:intergenic | 5.0% |
| !! | TTGAATAAAAATATTAAAAA+TGG | - | chr3_1:79945562-79945581 | None:intergenic | 5.0% |
| !! | ATTTATTAAAAAAAATCAAA+AGG | - | chr3_1:79946005-79946024 | None:intergenic | 5.0% |
| !!! | TTTTTTTTAATAAATTTTTC+TGG | + | chr3_1:79946010-79946029 | Msa0379050:intron | 5.0% |
| !!! | TTTTTTTAATAAATTTTTCT+GGG | + | chr3_1:79946011-79946030 | Msa0379050:intron | 5.0% |
| CGAGTCGTCAACGCAAAATG+TGG | - | chr3_1:79938612-79938631 | None:intergenic | 50.0% | |
| TCCTCAATCGATCCCATCAC+CGG | + | chr3_1:79938699-79938718 | Msa0379050:CDS | 50.0% | |
| GAAGGATATGGCAGGAAGTC+TGG | - | chr3_1:79938766-79938785 | None:intergenic | 50.0% | |
| AACGCAAGTTGCAGAAGCGA+AGG | - | chr3_1:79938784-79938803 | None:intergenic | 50.0% | |
| ! | GAAAGTGCAGAGGCGAGTTT+AGG | - | chr3_1:79938849-79938868 | None:intergenic | 50.0% |
| TTAGGACTTACGCGGAGTGA+AGG | - | chr3_1:79938879-79938898 | None:intergenic | 50.0% | |
| CAACTTCATTCACCGCATCC+TGG | - | chr3_1:79938967-79938986 | None:intergenic | 50.0% | |
| TTCCAACGGTGCAGGTTAAG+CGG | + | chr3_1:79939141-79939160 | Msa0379050:intron | 50.0% | |
| TGCAGGTTAAGCGGAGAGTA+GGG | + | chr3_1:79939150-79939169 | Msa0379050:intron | 50.0% | |
| ! | CGAGACTACCTTTGGTAGCA+AGG | - | chr3_1:79939561-79939580 | None:intergenic | 50.0% |
| GTAAGCCACCTCTTGCCTTA+AGG | - | chr3_1:79939625-79939644 | None:intergenic | 50.0% | |
| AAAGGCAGTCTACGTGCGAA+TGG | + | chr3_1:79939894-79939913 | Msa0379050:intron | 50.0% | |
| CTAATTCCGAGGTGAGGGAA+GGG | - | chr3_1:79940240-79940259 | None:intergenic | 50.0% | |
| TCTAATTCCGAGGTGAGGGA+AGG | - | chr3_1:79940241-79940260 | None:intergenic | 50.0% | |
| ! | CACATGGTTCTTGAGGTGTC+TGG | - | chr3_1:79940330-79940349 | None:intergenic | 50.0% |
| GAATACTCAGCCTCTGTCTC+TGG | + | chr3_1:79940376-79940395 | Msa0379050:CDS | 50.0% | |
| ! | GAATTGGTGACCAGAGACAG+AGG | - | chr3_1:79940389-79940408 | None:intergenic | 50.0% |
| TCTGGTCACCAATTCCCTGT+TGG | + | chr3_1:79940394-79940413 | Msa0379050:CDS | 50.0% | |
| CTGGTCACCAATTCCCTGTT+GGG | + | chr3_1:79940395-79940414 | Msa0379050:CDS | 50.0% | |
| TGGTCACCAATTCCCTGTTG+GGG | + | chr3_1:79940396-79940415 | Msa0379050:CDS | 50.0% | |
| AACGACTGTGTCCATAGGCA+TGG | - | chr3_1:79940964-79940983 | None:intergenic | 50.0% | |
| CCTATGGACACAGTCGTTGT+GGG | + | chr3_1:79940966-79940985 | Msa0379050:CDS | 50.0% | |
| GTGGCAAGAGCGAAGAAAAG+GGG | - | chr3_1:79941123-79941142 | None:intergenic | 50.0% | |
| ! | ACCGGGCTGCCCTTTTATAA+TGG | - | chr3_1:79941394-79941413 | None:intergenic | 50.0% |
| ! | TATGCAGGAGCTTTGTGCAC+CGG | - | chr3_1:79941412-79941431 | None:intergenic | 50.0% |
| CACAAAGCTCCTGCATATGC+AGG | + | chr3_1:79941415-79941434 | Msa0379050:intron | 50.0% | |
| CAGGGATCTAGGTGAGATGT+TGG | + | chr3_1:79941474-79941493 | Msa0379050:intron | 50.0% | |
| GGGATCTAGGTGAGATGTTG+GGG | + | chr3_1:79941476-79941495 | Msa0379050:intron | 50.0% | |
| GGATCTAGGTGAGATGTTGG+GGG | + | chr3_1:79941477-79941496 | Msa0379050:intron | 50.0% | |
| AAAGCGGGACCGAGAAGAAT+TGG | - | chr3_1:79941657-79941676 | None:intergenic | 50.0% | |
| ACATGTGGGTGGCAGATACA+AGG | + | chr3_1:79941868-79941887 | Msa0379050:CDS | 50.0% | |
| TGGCTAACTGCCAAAAGGGA+AGG | + | chr3_1:79941929-79941948 | Msa0379050:CDS | 50.0% | |
| GGCTAACTGCCAAAAGGGAA+GGG | + | chr3_1:79941930-79941949 | Msa0379050:CDS | 50.0% | |
| ! | TTGCTGATGCCCTTCCCTTT+TGG | - | chr3_1:79941942-79941961 | None:intergenic | 50.0% |
| GGATCAGAGGGAATAAGAGG+TGG | + | chr3_1:79942230-79942249 | Msa0379050:intron | 50.0% | |
| CTATTCGGGATTGACAGCCA+AGG | - | chr3_1:79942604-79942623 | None:intergenic | 50.0% | |
| GAACCTAGTGTTGTCCATGG+CGG | + | chr3_1:79942813-79942832 | Msa0379050:intron | 50.0% | |
| !! | CCAATTTTGGCCGATATGGC+AGG | - | chr3_1:79942903-79942922 | None:intergenic | 50.0% |
| CCTGCCATATCGGCCAAAAT+TGG | + | chr3_1:79942900-79942919 | Msa0379050:intron | 50.0% | |
| !! | ACCAGTGTTGTGGCGGATAA+CGG | - | chr3_1:79942939-79942958 | None:intergenic | 50.0% |
| ! | AGTCGGTTCAACCAGTGTTG+TGG | - | chr3_1:79942949-79942968 | None:intergenic | 50.0% |
| AACCAGCCAGATTACAGCCT+AGG | - | chr3_1:79943240-79943259 | None:intergenic | 50.0% | |
| GAGCCTCCTGAGTTGTACAT+TGG | + | chr3_1:79943560-79943579 | Msa0379050:CDS | 50.0% | |
| GCCTCCTGAGTTGTACATTG+GGG | + | chr3_1:79943562-79943581 | Msa0379050:CDS | 50.0% | |
| ACCCCAATGTACAACTCAGG+AGG | - | chr3_1:79943566-79943585 | None:intergenic | 50.0% | |
| GTCACCCCAATGTACAACTC+AGG | - | chr3_1:79943569-79943588 | None:intergenic | 50.0% | |
| !! | CATTGGCTTCTCTGCTCCAA+TGG | - | chr3_1:79943609-79943628 | None:intergenic | 50.0% |
| GCCAACCATCAGATCCAAAC+AGG | + | chr3_1:79944094-79944113 | Msa0379050:intron | 50.0% | |
| CCCTGTTTGGATCTGATGGT+TGG | - | chr3_1:79944098-79944117 | None:intergenic | 50.0% | |
| AAGGGTGGTCTAATGGCTAG+AGG | + | chr3_1:79944519-79944538 | Msa0379050:intron | 50.0% | |
| GTGGTCTAATGGCTAGAGGT+AGG | + | chr3_1:79944523-79944542 | Msa0379050:intron | 50.0% | |
| GTTAAAAGCCTATCCCCACC+AGG | - | chr3_1:79944686-79944705 | None:intergenic | 50.0% | |
| GGCAGAGTGGATGAGATGAT+TGG | - | chr3_1:79944709-79944728 | None:intergenic | 50.0% | |
| AGCTGTTGAACATGGCAGAG+TGG | - | chr3_1:79944722-79944741 | None:intergenic | 50.0% | |
| ! | TGGTGGACCACCTCTAATGT+TGG | - | chr3_1:79945295-79945314 | None:intergenic | 50.0% |
| !! | TCTGAGCCTAAAGGCACCAA+TGG | - | chr3_1:79946514-79946533 | None:intergenic | 50.0% |
| !! | ACACACAGCTCTGAGCCTAA+AGG | - | chr3_1:79946523-79946542 | None:intergenic | 50.0% |
| GCTTCATTAACTGAGGTCCG+TGG | + | chr3_1:79946730-79946749 | Msa0379050:CDS | 50.0% | |
| GGGGAGAAATTCCAGGAGTT+CGG | + | chr3_1:79946774-79946793 | Msa0379050:CDS | 50.0% | |
| !!! | GCCGCGGCGAATCATTTTTT+GGG | + | chr3_1:79946854-79946873 | Msa0379050:CDS | 50.0% |
| GCCCAAAAAATGATTCGCCG+CGG | - | chr3_1:79946858-79946877 | None:intergenic | 50.0% | |
| TGCTGATAGCTCCCCTTTCT+TGG | + | chr3_1:79946885-79946904 | Msa0379050:CDS | 50.0% | |
| !! | CAACTGATGGGCTTTGCATC+TGG | - | chr3_1:79946994-79947013 | None:intergenic | 50.0% |
| GTCATATGATCCTCCCTCTG+TGG | + | chr3_1:79947050-79947069 | Msa0379050:CDS | 50.0% | |
| ! | GATGATGACGATTGCGGGCT+CGG | - | chr3_1:79938532-79938551 | None:intergenic | 55.0% |
| CGGTGGTTCCTCCATTGTTG+TGG | - | chr3_1:79938643-79938662 | None:intergenic | 55.0% | |
| ! | CGCGATGATGATGAACACGG+TGG | - | chr3_1:79938660-79938679 | None:intergenic | 55.0% |
| AGGACGTTGATGCCGGTGAT+GGG | - | chr3_1:79938714-79938733 | None:intergenic | 55.0% | |
| TGTGGAGAAGATCGTCGCTG+AGG | - | chr3_1:79938734-79938753 | None:intergenic | 55.0% | |
| GCAGAAGCGAAGGATATGGC+AGG | - | chr3_1:79938774-79938793 | None:intergenic | 55.0% | |
| GTGCAGGTTAAGCGGAGAGT+AGG | + | chr3_1:79939149-79939168 | Msa0379050:intron | 55.0% | |
| GGCACCCTTAAGCTACCAAC+TGG | + | chr3_1:79939588-79939607 | Msa0379050:intron | 55.0% | |
| GGAATACCCTTCCCTCACCT+CGG | + | chr3_1:79940231-79940250 | Msa0379050:intron | 55.0% | |
| GCCTATGGACACAGTCGTTG+TGG | + | chr3_1:79940965-79940984 | Msa0379050:CDS | 55.0% | |
| CCCACAACGACTGTGTCCAT+AGG | - | chr3_1:79940969-79940988 | None:intergenic | 55.0% | |
| GTCGTTGTGGGCGATGAAAG+AGG | + | chr3_1:79940978-79940997 | Msa0379050:CDS | 55.0% | |
| GCGAAGAAAAGGGGATCGAG+AGG | - | chr3_1:79941114-79941133 | None:intergenic | 55.0% | |
| ! | ATGCAGGAGCTTTGTGCACC+GGG | - | chr3_1:79941411-79941430 | None:intergenic | 55.0% |
| GGGCATCAGCAACCTCTTGA+TGG | + | chr3_1:79941950-79941969 | Msa0379050:CDS | 55.0% | |
| TCTCCGCCATGGACAACACT+AGG | - | chr3_1:79942819-79942838 | None:intergenic | 55.0% | |
| GAGCCGAAATCCTGCCATAC+CGG | + | chr3_1:79942837-79942856 | Msa0379050:intron | 55.0% | |
| CAGCCGGTATGGCAGGATTT+CGG | - | chr3_1:79942843-79942862 | None:intergenic | 55.0% | |
| !! | AGTGTTGTGGCGGATAACGG+CGG | - | chr3_1:79942936-79942955 | None:intergenic | 55.0% |
| CGGTTCAACCAGTGTTGTGG+CGG | - | chr3_1:79942946-79942965 | None:intergenic | 55.0% | |
| TGCCTAGGCTGTAATCTGGC+TGG | + | chr3_1:79943235-79943254 | Msa0379050:intron | 55.0% | |
| AAAGCCTATCCCCACCAGGT+GGG | - | chr3_1:79944682-79944701 | None:intergenic | 55.0% | |
| AAAAGCCTATCCCCACCAGG+TGG | - | chr3_1:79944683-79944702 | None:intergenic | 55.0% | |
| GCATGTTGCCCATCATGGCA+TGG | - | chr3_1:79944920-79944939 | None:intergenic | 55.0% | |
| AGGCCATGGGTGATGAGAGA+AGG | + | chr3_1:79945964-79945983 | Msa0379050:intron | 55.0% | |
| GGCCATGGGTGATGAGAGAA+GGG | + | chr3_1:79945965-79945984 | Msa0379050:intron | 55.0% | |
| GATGAGAGAAGGGCCATGAG+AGG | + | chr3_1:79945975-79945994 | Msa0379050:intron | 55.0% | |
| TCCAGGAGTTCGGAGAGTGA+TGG | + | chr3_1:79946784-79946803 | Msa0379050:CDS | 55.0% | |
| TCCATCACTCTCCGAACTCC+TGG | - | chr3_1:79946788-79946807 | None:intergenic | 55.0% | |
| !!! | GGCCGCGGCGAATCATTTTT+TGG | + | chr3_1:79946853-79946872 | Msa0379050:CDS | 55.0% |
| !! | TTTCCAGGAGTGCCATTGGC+TGG | + | chr3_1:79946913-79946932 | Msa0379050:CDS | 55.0% |
| ATTCCAGCCAATGGCACTCC+TGG | - | chr3_1:79946919-79946938 | None:intergenic | 55.0% | |
| TCATCGCGATCGACCTCCAG+AGG | + | chr3_1:79938672-79938691 | Msa0379050:CDS | 60.0% | |
| !! | GCCGGTGATGGGATCGATTG+AGG | - | chr3_1:79938703-79938722 | None:intergenic | 60.0% |
| GAGGACGTTGATGCCGGTGA+TGG | - | chr3_1:79938715-79938734 | None:intergenic | 60.0% | |
| GTCGCTGAGGACGTTGATGC+CGG | - | chr3_1:79938721-79938740 | None:intergenic | 60.0% | |
| CTCCGCTTAACCTGCACCGT+TGG | - | chr3_1:79939146-79939165 | None:intergenic | 60.0% | |
| GCTCCTGCATATGCAGGGTC+CGG | + | chr3_1:79941421-79941440 | Msa0379050:intron | 60.0% | |
| CTCCTGCATATGCAGGGTCC+GGG | + | chr3_1:79941422-79941441 | Msa0379050:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+AGG | - | chr3_1:79941427-79941446 | None:intergenic | 60.0% | |
| TGCATATGCAGGGTCCGGGA+AGG | + | chr3_1:79941426-79941445 | Msa0379050:intron | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr3_1:79941427-79941446 | Msa0379050:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr3_1:79941428-79941447 | Msa0379050:intron | 60.0% | |
| AGGATTTCGGCTCTCCGCCA+TGG | - | chr3_1:79942830-79942849 | None:intergenic | 60.0% | |
| CACAAAGCAGCCGGTATGGC+AGG | - | chr3_1:79942850-79942869 | None:intergenic | 60.0% | |
| ! | CTGCCATACCGGCTGCTTTG+TGG | + | chr3_1:79942848-79942867 | Msa0379050:intron | 60.0% |
| GTGCCACAAAGCAGCCGGTA+TGG | - | chr3_1:79942854-79942873 | None:intergenic | 60.0% | |
| CGACAGTGCCACAAAGCAGC+CGG | - | chr3_1:79942859-79942878 | None:intergenic | 60.0% | |
| GCCGTTATCCGCCACAACAC+TGG | + | chr3_1:79942935-79942954 | Msa0379050:intron | 60.0% | |
| AAGCCTATCCCCACCAGGTG+GGG | - | chr3_1:79944681-79944700 | None:intergenic | 60.0% | |
| GGCCCTTCTCTCATCACCCA+TGG | - | chr3_1:79945970-79945989 | None:intergenic | 60.0% | |
| !! | GTTGTGGCGGATAACGGCGG+AGG | - | chr3_1:79942933-79942952 | None:intergenic | 65.0% |
| TTCATGCGGCTGACCCCACC+TGG | + | chr3_1:79944665-79944684 | Msa0379050:intron | 65.0% | |
| TGACCCCACCTGGTGGGGAT+AGG | + | chr3_1:79944675-79944694 | Msa0379050:intron | 65.0% | |
| ATGCGGCTGACCCCACCTGG+TGG | + | chr3_1:79944668-79944687 | Msa0379050:intron | 70.0% | |
| TGCGGCTGACCCCACCTGGT+GGG | + | chr3_1:79944669-79944688 | Msa0379050:intron | 70.0% | |
| GCGGCTGACCCCACCTGGTG+GGG | + | chr3_1:79944670-79944689 | Msa0379050:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 79938500 | 79947388 | 79938500 | ID=Msa0379050;Name=Msa0379050 |
| chr3_1 | mRNA | 79938500 | 79947388 | 79938500 | ID=Msa0379050-mRNA-1;Parent=Msa0379050;Name=Msa0379050-mRNA-1;_AED=0.21;_eAED=0.21;_QI=148|0.88|0.9|1|0.88|0.8|10|308|530 |
| chr3_1 | exon | 79938500 | 79938887 | 79938500 | ID=Msa0379050-mRNA-1:exon:19841;Parent=Msa0379050-mRNA-1 |
| chr3_1 | exon | 79938968 | 79939075 | 79938968 | ID=Msa0379050-mRNA-1:exon:19842;Parent=Msa0379050-mRNA-1 |
| chr3_1 | exon | 79939155 | 79939247 | 79939155 | ID=Msa0379050-mRNA-1:exon:19843;Parent=Msa0379050-mRNA-1 |
| chr3_1 | exon | 79939331 | 79939465 | 79939331 | ID=Msa0379050-mRNA-1:exon:19844;Parent=Msa0379050-mRNA-1 |
| chr3_1 | exon | 79940331 | 79940417 | 79940331 | ID=Msa0379050-mRNA-1:exon:19845;Parent=Msa0379050-mRNA-1 |
| chr3_1 | exon | 79940533 | 79940572 | 79940533 | ID=Msa0379050-mRNA-1:exon:19846;Parent=Msa0379050-mRNA-1 |
| chr3_1 | exon | 79940955 | 79941107 | 79940955 | ID=Msa0379050-mRNA-1:exon:19847;Parent=Msa0379050-mRNA-1 |
| chr3_1 | exon | 79941828 | 79942003 | 79941828 | ID=Msa0379050-mRNA-1:exon:19848;Parent=Msa0379050-mRNA-1 |
| chr3_1 | exon | 79943545 | 79943663 | 79943545 | ID=Msa0379050-mRNA-1:exon:19849;Parent=Msa0379050-mRNA-1 |
| chr3_1 | exon | 79946639 | 79947388 | 79946639 | ID=Msa0379050-mRNA-1:exon:19850;Parent=Msa0379050-mRNA-1 |
| chr3_1 | five_prime_UTR | 79938500 | 79938647 | 79938500 | ID=Msa0379050-mRNA-1:five_prime_utr;Parent=Msa0379050-mRNA-1 |
| chr3_1 | CDS | 79938648 | 79938887 | 79938648 | ID=Msa0379050-mRNA-1:cds;Parent=Msa0379050-mRNA-1 |
| chr3_1 | CDS | 79938968 | 79939075 | 79938968 | ID=Msa0379050-mRNA-1:cds;Parent=Msa0379050-mRNA-1 |
| chr3_1 | CDS | 79939155 | 79939247 | 79939155 | ID=Msa0379050-mRNA-1:cds;Parent=Msa0379050-mRNA-1 |
| chr3_1 | CDS | 79939331 | 79939465 | 79939331 | ID=Msa0379050-mRNA-1:cds;Parent=Msa0379050-mRNA-1 |
| chr3_1 | CDS | 79940331 | 79940417 | 79940331 | ID=Msa0379050-mRNA-1:cds;Parent=Msa0379050-mRNA-1 |
| chr3_1 | CDS | 79940533 | 79940572 | 79940533 | ID=Msa0379050-mRNA-1:cds;Parent=Msa0379050-mRNA-1 |
| chr3_1 | CDS | 79940955 | 79941107 | 79940955 | ID=Msa0379050-mRNA-1:cds;Parent=Msa0379050-mRNA-1 |
| chr3_1 | CDS | 79941828 | 79942003 | 79941828 | ID=Msa0379050-mRNA-1:cds;Parent=Msa0379050-mRNA-1 |
| chr3_1 | CDS | 79943545 | 79943663 | 79943545 | ID=Msa0379050-mRNA-1:cds;Parent=Msa0379050-mRNA-1 |
| chr3_1 | CDS | 79946639 | 79947080 | 79946639 | ID=Msa0379050-mRNA-1:cds;Parent=Msa0379050-mRNA-1 |
| chr3_1 | three_prime_UTR | 79947081 | 79947388 | 79947081 | ID=Msa0379050-mRNA-1:three_prime_utr;Parent=Msa0379050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
