Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388530 | XP_013450312.1 | 93.154 | 409 | 8 | 1 | 1 | 389 | 1 | 409 | 0.0 | 765 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388530 | sp|Q8LB17|RBL15_ARATH | 65.526 | 409 | 109 | 6 | 7 | 389 | 1 | 403 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388530 | A0A072UEY4 | 93.154 | 409 | 8 | 1 | 1 | 389 | 1 | 409 | 0.0 | 765 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0388530 | Msa1144620 | 0.800263 | 1.564640e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388530 | MtrunA17_Chr7g0268441 | 93.154 | 409 | 8 | 1 | 1 | 389 | 1 | 409 | 0.0 | 765 |
| Msa0388530 | MtrunA17_Chr4g0069651 | 34.965 | 143 | 87 | 4 | 52 | 193 | 77 | 214 | 7.34e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388530 | AT3G58460.1 | 65.526 | 409 | 109 | 6 | 7 | 389 | 1 | 403 | 0.0 | 526 |
| Msa0388530 | AT3G58460.2 | 64.838 | 401 | 109 | 6 | 15 | 389 | 32 | 426 | 0.0 | 511 |
| Msa0388530 | AT3G17611.1 | 34.507 | 142 | 90 | 3 | 52 | 193 | 78 | 216 | 6.59e-13 | 69.7 |
| Msa0388530 | AT3G59520.1 | 30.994 | 171 | 107 | 5 | 51 | 217 | 52 | 215 | 9.14e-11 | 62.4 |
Find 127 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTTTCTGGCATTGTATC+TGG | 0.070079 | 3_1:+92994535 | Msa0388530:CDS |
| TCACTACTTGGTCACCTTTC+TGG | 0.099218 | 3_1:+92994523 | Msa0388530:CDS |
| ACTTACCTAGTGGTTGAATT+TGG | 0.145964 | 3_1:-92995574 | None:intergenic |
| TTTACCTCAGTGACGATATT+TGG | 0.185705 | 3_1:-92992326 | None:intergenic |
| TCTTTACTTCGTTTGTCTTT+TGG | 0.225345 | 3_1:+92992567 | Msa0388530:CDS |
| GCATGCAACAATTTCAGTTT+TGG | 0.231338 | 3_1:-92992283 | None:intergenic |
| CATGATGGCTTTAGTTCCTT+TGG | 0.232375 | 3_1:+92993224 | Msa0388530:CDS |
| GCTCAAGGTCAAATTGCTTC+TGG | 0.257584 | 3_1:+92996696 | Msa0388530:CDS |
| AGACTCCATCGCTAACAATT+TGG | 0.273830 | 3_1:+92998544 | Msa0388530:three_prime_UTR |
| CTTTCACTCTTCCTCAGTTC+GGG | 0.293434 | 3_1:-92992132 | None:intergenic |
| CTTTCACTCTTCCTCAGTTC+GGG | 0.293434 | 3_1:-92992179 | None:intergenic |
| CTCTACCCTCGTCTTGAATA+TGG | 0.301077 | 3_1:+92998727 | Msa0388530:three_prime_UTR |
| CTTACCTAGTGGTTGAATTT+GGG | 0.317996 | 3_1:-92995573 | None:intergenic |
| TTGTAGCAATGGGCTTTGAT+AGG | 0.321891 | 3_1:+92997968 | Msa0388530:CDS |
| ATATTTGGTCTCATAGTTCT+TGG | 0.323261 | 3_1:-92992311 | None:intergenic |
| CTTGTTGTTTCAGATACATT+TGG | 0.325633 | 3_1:+92994655 | Msa0388530:intron |
| TCTTTCACTCTTCCTCAGTT+CGG | 0.336715 | 3_1:-92992133 | None:intergenic |
| TCTTTCACTCTTCCTCAGTT+CGG | 0.336715 | 3_1:-92992180 | None:intergenic |
| ATGATGGCTTTAGTTCCTTT+GGG | 0.338505 | 3_1:+92993225 | Msa0388530:CDS |
| TCTTCAAGCCAGACTCTTAG+AGG | 0.341171 | 3_1:+92996737 | Msa0388530:CDS |
| GAATTTGGGCTTGTATTTGT+AGG | 0.352564 | 3_1:-92995559 | None:intergenic |
| TTGCACGGGCGGAAATCCTT+CGG | 0.353171 | 3_1:+92995528 | Msa0388530:CDS |
| CTCATGAATGAGTGTGCTAT+TGG | 0.353425 | 3_1:+92993381 | Msa0388530:CDS |
| ACCTTTCTGGCATTGTATCT+GGG | 0.368578 | 3_1:+92994536 | Msa0388530:CDS |
| TTGTTTAATTTCCTCATACC+TGG | 0.376332 | 3_1:+92994679 | Msa0388530:CDS |
| CACCATTGATTCACCCTAGT+TGG | 0.381945 | 3_1:-92992496 | None:intergenic |
| CTGGCTTGAAGATTTGAATC+TGG | 0.384896 | 3_1:-92996726 | None:intergenic |
| TGCACGGGCGGAAATCCTTC+GGG | 0.390782 | 3_1:+92995529 | Msa0388530:CDS |
| CACAGGCAGGGTTGCCAACT+AGG | 0.401860 | 3_1:+92992482 | Msa0388530:intron |
| TTCTGTTCATATGTGTTTCG+AGG | 0.409605 | 3_1:-92998572 | None:intergenic |
| TTTGAGGCATCAATGATGAT+AGG | 0.410970 | 3_1:-92995708 | None:intergenic |
| CTCTGAGCTGGAAAGGATCA+TGG | 0.411538 | 3_1:+92993248 | Msa0388530:CDS |
| AGTTCCTTTGGGCTCTGAGC+TGG | 0.412768 | 3_1:+92993236 | Msa0388530:CDS |
| AACAGTGTCAGGGAAGTCTC+TGG | 0.425147 | 3_1:-92998502 | None:intergenic |
| ACAAGCACAACAACAGTGTC+AGG | 0.435125 | 3_1:-92998513 | None:intergenic |
| AATACATGAAAAGCTTGTCT+TGG | 0.447876 | 3_1:+92998475 | Msa0388530:exon |
| ATTAAGAAACTTGTAGCAAT+GGG | 0.448179 | 3_1:+92997958 | Msa0388530:CDS |
| AATTTGGGCTTGTATTTGTA+GGG | 0.448368 | 3_1:-92995558 | None:intergenic |
| ACTATTATCCTCTAAGAGTC+TGG | 0.452988 | 3_1:-92996745 | None:intergenic |
| CTTTGGGCTCTGAGCTGGAA+AGG | 0.453377 | 3_1:+92993241 | Msa0388530:CDS |
| GTCGATAATGCAGCTACAAC+AGG | 0.453873 | 3_1:+92997800 | Msa0388530:CDS |
| TCATGTTCTCTTCAACATGA+TGG | 0.454685 | 3_1:+92993209 | Msa0388530:CDS |
| ATGCAAAATGTCTCACTACT+TGG | 0.462766 | 3_1:+92994511 | Msa0388530:CDS |
| TACCTAGTACTTAGAATGGC+TGG | 0.463203 | 3_1:-92996786 | None:intergenic |
| AGCAGCTGTTCCACATCATC+AGG | 0.466946 | 3_1:+92997823 | Msa0388530:CDS |
| GTAGCGCTGGCGGCTGCTGA+TGG | 0.468493 | 3_1:+92998293 | Msa0388530:CDS |
| TCATGAATGAGTGTGCTATT+GGG | 0.470067 | 3_1:+92993382 | Msa0388530:CDS |
| GACAGTAGGTTCCCTGGGAG+GGG | 0.474289 | 3_1:+92996657 | Msa0388530:CDS |
| CTTCAATTGAAGCCTCCTCC+TGG | 0.476565 | 3_1:+92994716 | Msa0388530:CDS |
| TCCGAAATTTATTGTTTGCA+CGG | 0.477584 | 3_1:+92995513 | Msa0388530:CDS |
| GCAAGGGTCCTTCCCCTCCC+AGG | 0.481331 | 3_1:-92996669 | None:intergenic |
| AATTGTACTCACCACTTGGC+AGG | 0.481412 | 3_1:-92994111 | None:intergenic |
| TGCAGCTTACTGAATGGCCA+TGG | 0.483332 | 3_1:-92998786 | None:intergenic |
| GGCTGGATCTGAGAGATGAT+TGG | 0.486668 | 3_1:-92996769 | None:intergenic |
| CCGAAATTTATTGTTTGCAC+GGG | 0.491860 | 3_1:+92995514 | Msa0388530:CDS |
| GCTGGATCTGAGAGATGATT+GGG | 0.494144 | 3_1:-92996768 | None:intergenic |
| CCCGTGCAAACAATAAATTT+CGG | 0.497861 | 3_1:-92995514 | None:intergenic |
| GGAAATACTCATGAGCCAAC+AGG | 0.498360 | 3_1:+92998334 | Msa0388530:CDS |
| TGTTTAATTTCCTCATACCT+GGG | 0.498738 | 3_1:+92994680 | Msa0388530:CDS |
| ATCAACACACTACGCTTATG+TGG | 0.503841 | 3_1:-92998610 | None:intergenic |
| TGAGTAGACACTTCTCTTTG+AGG | 0.504429 | 3_1:-92995724 | None:intergenic |
| AAATTTATTGTTTGCACGGG+CGG | 0.507340 | 3_1:+92995517 | Msa0388530:CDS |
| GATTAAGAAACTTGTAGCAA+TGG | 0.510062 | 3_1:+92997957 | Msa0388530:CDS |
| TGTAGCAATGGGCTTTGATA+GGG | 0.510841 | 3_1:+92997969 | Msa0388530:CDS |
| TACAATCCTATTCTTACGAA+TGG | 0.511251 | 3_1:+92993354 | Msa0388530:CDS |
| GGACAGTAGGTTCCCTGGGA+GGG | 0.512866 | 3_1:+92996656 | Msa0388530:CDS |
| AGATAACCATTCGTAAGAAT+AGG | 0.513748 | 3_1:-92993360 | None:intergenic |
| AAAATGATGTCCCAGGTATG+AGG | 0.519976 | 3_1:-92994690 | None:intergenic |
| AGGACCCTTGCTGCTGCTCA+AGG | 0.521357 | 3_1:+92996681 | Msa0388530:CDS |
| GACGCAAGTGGAAGTAGCGC+TGG | 0.523639 | 3_1:+92998280 | Msa0388530:intron |
| GTAGGTTCCCTGGGAGGGGA+AGG | 0.528095 | 3_1:+92996661 | Msa0388530:CDS |
| TTGAGGACAGTAGGTTCCCT+GGG | 0.536030 | 3_1:+92996652 | Msa0388530:CDS |
| TTCAAGACGAGGGTAGAGAA+TGG | 0.536117 | 3_1:-92998722 | None:intergenic |
| TGAATGGCCATGGGCATTAG+CGG | 0.536231 | 3_1:-92998776 | None:intergenic |
| CTCATACCTAGTACTTAGAA+TGG | 0.536299 | 3_1:-92996790 | None:intergenic |
| TCAAGACGAGGGTAGAGAAT+GGG | 0.537275 | 3_1:-92998721 | None:intergenic |
| TGCCAACTAGGGTGAATCAA+TGG | 0.541751 | 3_1:+92992494 | Msa0388530:CDS |
| CAGTGAACCATGGAAAAGAA+TGG | 0.547386 | 3_1:-92993184 | None:intergenic |
| GTTGAGGACAGTAGGTTCCC+TGG | 0.549584 | 3_1:+92996651 | Msa0388530:CDS |
| AGAAGTGTCTACTCAACCTC+AGG | 0.552036 | 3_1:+92995732 | Msa0388530:CDS |
| ACCCAGATACAATGCCAGAA+AGG | 0.553492 | 3_1:-92994537 | None:intergenic |
| GAAGAATAAAATGATGTCCC+AGG | 0.561571 | 3_1:-92994697 | None:intergenic |
| TCTGAGCTGGAAAGGATCAT+GGG | 0.562690 | 3_1:+92993249 | Msa0388530:CDS |
| ACAGGCAGGGTTGCCAACTA+GGG | 0.563955 | 3_1:+92992483 | Msa0388530:intron |
| TTGACCTTGAGCAGCAGCAA+GGG | 0.565568 | 3_1:-92996685 | None:intergenic |
| AAGTAAAATACCTGATGATG+TGG | 0.565768 | 3_1:-92997833 | None:intergenic |
| AGGGTAGAGAATGGGTGAGC+GGG | 0.566933 | 3_1:-92998713 | None:intergenic |
| ATCCAGCCATTCTAAGTACT+AGG | 0.568427 | 3_1:+92996784 | Msa0388530:CDS |
| CCAGCAGTGCTATGAAAACA+TGG | 0.569062 | 3_1:-92993326 | None:intergenic |
| GTTGTAGCTGCATTATCGAC+TGG | 0.569716 | 3_1:-92997797 | None:intergenic |
| GAGACTTACAAGCCAGGAGG+AGG | 0.571961 | 3_1:-92994728 | None:intergenic |
| TGTCACCAAATTGTTAGCGA+TGG | 0.578964 | 3_1:-92998549 | None:intergenic |
| CAAGGGTCCTTCCCCTCCCA+GGG | 0.582569 | 3_1:-92996668 | None:intergenic |
| AAGAAAGAGACTTACAAGCC+AGG | 0.583379 | 3_1:-92994734 | None:intergenic |
| CAAGCCCAAATTCAACCACT+AGG | 0.585727 | 3_1:+92995569 | Msa0388530:CDS |
| CGAAACCTTGCAGTCAGTTG+AGG | 0.593045 | 3_1:+92996635 | Msa0388530:intron |
| ACAGTGTCAGGGAAGTCTCT+GGG | 0.595422 | 3_1:-92998501 | None:intergenic |
| GAACATGAAGCAGTGAACCA+TGG | 0.595771 | 3_1:-92993194 | None:intergenic |
| CAACTAGGGTGAATCAATGG+TGG | 0.600354 | 3_1:+92992497 | Msa0388530:CDS |
| TGCAGTCAGTTGAGGACAGT+AGG | 0.605412 | 3_1:+92996643 | Msa0388530:intron |
| TGGTGATCTTAATGTGGCAG+TGG | 0.610866 | 3_1:+92998313 | Msa0388530:CDS |
| AACTAGGGTGAATCAATGGT+GGG | 0.612660 | 3_1:+92992498 | Msa0388530:CDS |
| ACTTTCAGTCATCATGTGTG+AGG | 0.618682 | 3_1:+92995488 | Msa0388530:intron |
| GCAAGTGGAAGTAGCGCTGG+CGG | 0.619491 | 3_1:+92998283 | Msa0388530:CDS |
| TTTGACCTTGAGCAGCAGCA+AGG | 0.620558 | 3_1:-92996686 | None:intergenic |
| GCAGCTTACTGAATGGCCAT+GGG | 0.621896 | 3_1:-92998785 | None:intergenic |
| TCTGCTGTGGTTATTGTCTG+CGG | 0.626757 | 3_1:+92992541 | Msa0388530:CDS |
| GAGAACACCGCTAATGCCCA+TGG | 0.630975 | 3_1:+92998769 | Msa0388530:three_prime_UTR |
| TGCTGATGGTGATCTTAATG+TGG | 0.631768 | 3_1:+92998307 | Msa0388530:CDS |
| AGGACAGTAGGTTCCCTGGG+AGG | 0.633414 | 3_1:+92996655 | Msa0388530:CDS |
| TGTTTAATGTGCCTGCCAAG+TGG | 0.646614 | 3_1:+92994100 | Msa0388530:CDS |
| AACAACCATATTCAAGACGA+GGG | 0.648146 | 3_1:-92998732 | None:intergenic |
| TCCTCGATTGAACTCCACTC+AGG | 0.648381 | 3_1:-92993446 | None:intergenic |
| AAGAAAGAAAACCCGAACTG+AGG | 0.652254 | 3_1:+92992168 | Msa0388530:five_prime_UTR |
| GCCTGAGTGGAGTTCAATCG+AGG | 0.658593 | 3_1:+92993445 | Msa0388530:CDS |
| TGGGATTTCAACCCGAACTG+AGG | 0.663257 | 3_1:+92992121 | None:intergenic |
| CTTTCCAGCTCAGAGCCCAA+AGG | 0.663659 | 3_1:-92993240 | None:intergenic |
| CAAGCACAACAACAGTGTCA+GGG | 0.665191 | 3_1:-92998512 | None:intergenic |
| AAACAACCATATTCAAGACG+AGG | 0.665498 | 3_1:-92998733 | None:intergenic |
| TGTGTTGATGTATAATAACA+AGG | 0.668775 | 3_1:+92998624 | Msa0388530:three_prime_UTR |
| GAGGGTAGAGAATGGGTGAG+CGG | 0.669836 | 3_1:-92998714 | None:intergenic |
| GTTATAGAGACAAGCCTGAG+TGG | 0.670589 | 3_1:+92993432 | Msa0388530:CDS |
| GGTATGCTTTCAGACGCAAG+TGG | 0.686207 | 3_1:+92998268 | Msa0388530:intron |
| TTTGTAGGGATATAGCCCGA+AGG | 0.686252 | 3_1:-92995544 | None:intergenic |
| TGAGTGGAGTTCAATCGAGG+AGG | 0.701524 | 3_1:+92993448 | Msa0388530:CDS |
| AAAGAGACTTACAAGCCAGG+AGG | 0.739128 | 3_1:-92994731 | None:intergenic |
| GAGACCAAATATCGTCACTG+AGG | 0.740628 | 3_1:+92992322 | Msa0388530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTAATTTA+AGG | + | chr3_1:92994295-92994314 | Msa0388530:intron | 0.0% |
| !!! | AAACAAATAAATTTTAAACA+GGG | - | chr3_1:92994190-92994209 | None:intergenic | 10.0% |
| !!! | TAAACAAATAAATTTTAAAC+AGG | - | chr3_1:92994191-92994210 | None:intergenic | 10.0% |
| !!! | AAATTATATTCTTTTAATCT+CGG | - | chr3_1:92994271-92994290 | None:intergenic | 10.0% |
| !! | TACAGATTAAATTATTTAAA+AGG | + | chr3_1:92995212-92995231 | Msa0388530:intron | 10.0% |
| !! | TTGATTAAAAAAATAAAAAC+AGG | - | chr3_1:92996222-92996241 | None:intergenic | 10.0% |
| !!! | ATTTTATAATGATTAATTCT+TGG | + | chr3_1:92997083-92997102 | Msa0388530:intron | 10.0% |
| !!! | CATAAAAGATTATTTTAAGA+AGG | + | chr3_1:92993646-92993665 | Msa0388530:intron | 15.0% |
| !!! | AAAATGGATTAAAGTTTTAT+AGG | + | chr3_1:92993761-92993780 | Msa0388530:intron | 15.0% |
| !!! | TCTATAAAATTTGCAAATTT+TGG | - | chr3_1:92993794-92993813 | None:intergenic | 15.0% |
| !! | TAAATTATTTAAAAGGTTTC+AGG | + | chr3_1:92995219-92995238 | Msa0388530:intron | 15.0% |
| !!! | TTTATTGTCAGTAAAATTTT+AGG | + | chr3_1:92996852-92996871 | Msa0388530:intron | 15.0% |
| !! | AAAGATTTATGCATAATATA+TGG | + | chr3_1:92997307-92997326 | Msa0388530:intron | 15.0% |
| !! | CTATAATATTATTCAAAAGT+TGG | + | chr3_1:92997726-92997745 | Msa0388530:intron | 15.0% |
| !! | GAATAAAATTAGACAATTAA+GGG | - | chr3_1:92997771-92997790 | None:intergenic | 15.0% |
| !! | TGAATAAAATTAGACAATTA+AGG | - | chr3_1:92997772-92997791 | None:intergenic | 15.0% |
| !!! | TTAATTGTCTAATTTTATTC+AGG | + | chr3_1:92997771-92997790 | Msa0388530:intron | 15.0% |
| !! | TAAATGAAAGTAAAAGACAA+TGG | + | chr3_1:92992742-92992761 | Msa0388530:intron | 20.0% |
| !!! | AAAAGGCTTAAATATGTTTT+GGG | - | chr3_1:92993819-92993838 | None:intergenic | 20.0% |
| !!! | TAAGCAAGTACAATTTTAAT+AGG | + | chr3_1:92994322-92994341 | Msa0388530:intron | 20.0% |
| !!! | TAAATCCTTTTTATAACAAC+TGG | + | chr3_1:92994429-92994448 | Msa0388530:intron | 20.0% |
| !! | AAAATCCAGTTGTTATAAAA+AGG | - | chr3_1:92994437-92994456 | None:intergenic | 20.0% |
| !!! | TTTTTATAACAACTGGATTT+TGG | + | chr3_1:92994436-92994455 | Msa0388530:intron | 20.0% |
| !!! | TTTTATAACAACTGGATTTT+GGG | + | chr3_1:92994437-92994456 | Msa0388530:intron | 20.0% |
| !! | GAAAAGATAGAAAAGTAAAA+AGG | - | chr3_1:92994594-92994613 | None:intergenic | 20.0% |
| !! | AGTGTTCAATATTTGTAATT+GGG | - | chr3_1:92994877-92994896 | None:intergenic | 20.0% |
| !! | ATTGTCAATAAATAAGAACA+GGG | - | chr3_1:92994981-92995000 | None:intergenic | 20.0% |
| !! | AGTTAATCAATTAGTTAGTT+GGG | - | chr3_1:92995030-92995049 | None:intergenic | 20.0% |
| !! | TAGTTAATCAATTAGTTAGT+TGG | - | chr3_1:92995031-92995050 | None:intergenic | 20.0% |
| !! | ATTGAATTTGAATCAATATG+TGG | - | chr3_1:92995298-92995317 | None:intergenic | 20.0% |
| !! | ATTCAAATTCAATTAACCAT+TGG | + | chr3_1:92995305-92995324 | Msa0388530:intron | 20.0% |
| !!! | ATTTTAAACATGCATTTTCA+TGG | + | chr3_1:92995650-92995669 | Msa0388530:intron | 20.0% |
| !!! | TTTTAAACATGCATTTTCAT+GGG | + | chr3_1:92995651-92995670 | Msa0388530:intron | 20.0% |
| !! | ACTATTAATGCATTAAAAGA+GGG | - | chr3_1:92996141-92996160 | None:intergenic | 20.0% |
| !! | AACTATTAATGCATTAAAAG+AGG | - | chr3_1:92996142-92996161 | None:intergenic | 20.0% |
| !! | TAAAAATTTCACCTCATTAT+TGG | + | chr3_1:92996362-92996381 | Msa0388530:intron | 20.0% |
| !! | AAAAATTTCACCTCATTATT+GGG | + | chr3_1:92996363-92996382 | Msa0388530:intron | 20.0% |
| !! | ATATAGACACAAAAAAACAA+TGG | - | chr3_1:92996569-92996588 | None:intergenic | 20.0% |
| !! | AACTAAGAAAAATATGACTT+TGG | - | chr3_1:92996885-92996904 | None:intergenic | 20.0% |
| !! | GCATAAATATTAATTTCCAA+TGG | - | chr3_1:92997259-92997278 | None:intergenic | 20.0% |
| !! | ATAAGAAATATACATGATAC+TGG | + | chr3_1:92997364-92997383 | Msa0388530:intron | 20.0% |
| !! | TTTCCAATTATATCAATGAA+AGG | + | chr3_1:92997441-92997460 | Msa0388530:intron | 20.0% |
| !! | TTCCAATTATATCAATGAAA+GGG | + | chr3_1:92997442-92997461 | Msa0388530:intron | 20.0% |
| !!! | CTTGTTTTCTTTATATAATC+TGG | + | chr3_1:92997873-92997892 | Msa0388530:intron | 20.0% |
| !!! | TTTTAAGTGATCAAGAAAAA+TGG | + | chr3_1:92998012-92998031 | Msa0388530:intron | 20.0% |
| !! | ATCTAACCATCAAATTATTA+AGG | - | chr3_1:92998123-92998142 | None:intergenic | 20.0% |
| !! | TTGAAAAAAGAAATTCAACT+AGG | - | chr3_1:92998361-92998380 | None:intergenic | 20.0% |
| !!! | ATTGATAATGTTTTGTTTGT+TGG | + | chr3_1:92998432-92998451 | Msa0388530:intron | 20.0% |
| !!! | GCTATTTTTTCGTTTAAGAA+TGG | + | chr3_1:92992422-92992441 | Msa0388530:intron | 25.0% |
| ! | TCGTTTAAGAATGGTTAATT+AGG | + | chr3_1:92992431-92992450 | Msa0388530:intron | 25.0% |
| ! | CGTTTAAGAATGGTTAATTA+GGG | + | chr3_1:92992432-92992451 | Msa0388530:intron | 25.0% |
| ! | CAATATCTTGCATTATTCTT+CGG | + | chr3_1:92992668-92992687 | Msa0388530:intron | 25.0% |
| ! | TTACTTTAATCTTCTGTTGA+TGG | - | chr3_1:92992725-92992744 | None:intergenic | 25.0% |
| ! | TTGTAACACTCAAATACAAA+CGG | - | chr3_1:92992837-92992856 | None:intergenic | 25.0% |
| ! | ATATATAAGACACCAAAGAA+AGG | - | chr3_1:92992917-92992936 | None:intergenic | 25.0% |
| !!! | TTTGGTGTCTTATATATATG+AGG | + | chr3_1:92992920-92992939 | Msa0388530:intron | 25.0% |
| ! | TATATAAATATAGCTGCTGT+TGG | + | chr3_1:92993476-92993495 | Msa0388530:intron | 25.0% |
| ! | ATATAAATATAGCTGCTGTT+GGG | + | chr3_1:92993477-92993496 | Msa0388530:intron | 25.0% |
| ! | TTTAGTCTGGACTTAAAATA+GGG | - | chr3_1:92993720-92993739 | None:intergenic | 25.0% |
| !! | CAAAAGGCTTAAATATGTTT+TGG | - | chr3_1:92993820-92993839 | None:intergenic | 25.0% |
| !!! | CATTGCTTTTGTTAAATACA+GGG | - | chr3_1:92994218-92994237 | None:intergenic | 25.0% |
| !!! | ACATTGCTTTTGTTAAATAC+AGG | - | chr3_1:92994219-92994238 | None:intergenic | 25.0% |
| !!! | TAGGTATGCATTTTTTTTGT+TGG | + | chr3_1:92994471-92994490 | Msa0388530:intron | 25.0% |
| ! | AAGATAGAAAAGTAAAAAGG+AGG | - | chr3_1:92994591-92994610 | None:intergenic | 25.0% |
| !!! | GCATCACATTTTAATATCAT+AGG | - | chr3_1:92994636-92994655 | None:intergenic | 25.0% |
| !! | TTGCATTTTGCATGATATTA+AGG | + | chr3_1:92994805-92994824 | Msa0388530:intron | 25.0% |
| ! | GTGTTCAATATTTGTAATTG+GGG | - | chr3_1:92994876-92994895 | None:intergenic | 25.0% |
| ! | CAGTGTTCAATATTTGTAAT+TGG | - | chr3_1:92994878-92994897 | None:intergenic | 25.0% |
| ! | TTGTCAATAAATAAGAACAG+GGG | - | chr3_1:92994980-92994999 | None:intergenic | 25.0% |
| ! | CATTGTCAATAAATAAGAAC+AGG | - | chr3_1:92994982-92995001 | None:intergenic | 25.0% |
| ! | TTAATCAATTAGTTAGTTGG+GGG | - | chr3_1:92995028-92995047 | None:intergenic | 25.0% |
| ! | GTTAATCAATTAGTTAGTTG+GGG | - | chr3_1:92995029-92995048 | None:intergenic | 25.0% |
| !! | GAAAATGCATGTTTAAAATG+AGG | - | chr3_1:92995649-92995668 | None:intergenic | 25.0% |
| !! | TTTAAACATGCATTTTCATG+GGG | + | chr3_1:92995652-92995671 | Msa0388530:intron | 25.0% |
| !!! | GAATATTTTCTGGGAATATT+TGG | + | chr3_1:92995680-92995699 | Msa0388530:CDS | 25.0% |
| ! | TGCATTAATAGTTCTTCTTT+AGG | + | chr3_1:92996149-92996168 | Msa0388530:intron | 25.0% |
| ! | TTAAAACTAACCAGCTATTT+GGG | - | chr3_1:92996189-92996208 | None:intergenic | 25.0% |
| ! | CAGATTAATCAATTTATCCA+TGG | + | chr3_1:92996268-92996287 | Msa0388530:intron | 25.0% |
| ! | ATTCAATATTCCCAATAATG+AGG | - | chr3_1:92996376-92996395 | None:intergenic | 25.0% |
| ! | ATTTCAAGCTGTTTATTAAC+TGG | + | chr3_1:92996446-92996465 | Msa0388530:intron | 25.0% |
| ! | TTAACTATGTCTTGCATAAA+AGG | - | chr3_1:92996536-92996555 | None:intergenic | 25.0% |
| ! | AAACAAGTTATTATTGTCCA+TGG | - | chr3_1:92997035-92997054 | None:intergenic | 25.0% |
| ! | AATTCTTGGAACGTATATAT+TGG | + | chr3_1:92997097-92997116 | Msa0388530:intron | 25.0% |
| ! | TATAATCAGATATCCGTTAA+TGG | + | chr3_1:92997393-92997412 | Msa0388530:intron | 25.0% |
| ! | ATAATCAGATATCCGTTAAT+GGG | + | chr3_1:92997394-92997413 | Msa0388530:intron | 25.0% |
| ! | AACCCTTTCATTGATATAAT+TGG | - | chr3_1:92997447-92997466 | None:intergenic | 25.0% |
| ! | TCAAGTTAAACTTATTCATC+TGG | + | chr3_1:92997511-92997530 | Msa0388530:intron | 25.0% |
| !! | TTATTCATCTGGATTTTACT+AGG | + | chr3_1:92997522-92997541 | Msa0388530:intron | 25.0% |
| !! | TGACATGTTTGTTAAAAAAC+AGG | - | chr3_1:92997556-92997575 | None:intergenic | 25.0% |
| ! | TTAAACTGCTATACTTTAGT+AGG | + | chr3_1:92997689-92997708 | Msa0388530:intron | 25.0% |
| ! | ATTAAGAAACTTGTAGCAAT+GGG | + | chr3_1:92997958-92997977 | Msa0388530:CDS | 25.0% |
| ! | TCTTGATCACTTAAAAGATA+TGG | - | chr3_1:92998008-92998027 | None:intergenic | 25.0% |
| ! | ATCAAATTATTAAGGCAAGA+AGG | - | chr3_1:92998115-92998134 | None:intergenic | 25.0% |
| ! | TTCTTGCCTTAATAATTTGA+TGG | + | chr3_1:92998114-92998133 | Msa0388530:intron | 25.0% |
| !! | CACTTATTGAACTTTTTACT+CGG | + | chr3_1:92998159-92998178 | Msa0388530:intron | 25.0% |
| ! | AAAAAGCAAAATTGAGCTAT+AGG | - | chr3_1:92998235-92998254 | None:intergenic | 25.0% |
| !! | TGTGTTGATGTATAATAACA+AGG | + | chr3_1:92998624-92998643 | Msa0388530:three_prime_UTR | 25.0% |
| !!! | AACAATTTCAGTTTTGGGAA+TGG | - | chr3_1:92992280-92992299 | None:intergenic | 30.0% |
| ! | CATGCAACAATTTCAGTTTT+GGG | - | chr3_1:92992285-92992304 | None:intergenic | 30.0% |
| ATATTTGGTCTCATAGTTCT+TGG | - | chr3_1:92992314-92992333 | None:intergenic | 30.0% | |
| TGATTATGCTTAATTGACAC+AGG | + | chr3_1:92992465-92992484 | Msa0388530:intron | 30.0% | |
| ! | TCTTTACTTCGTTTGTCTTT+TGG | + | chr3_1:92992567-92992586 | Msa0388530:CDS | 30.0% |
| TATAACTTCTCTATAGTCTG+AGG | - | chr3_1:92992811-92992830 | None:intergenic | 30.0% | |
| ! | TAACGACCATTTTACAACTT+GGG | + | chr3_1:92992966-92992985 | Msa0388530:intron | 30.0% |
| GATTTGAATACTGTATCTTG+AGG | + | chr3_1:92992990-92993009 | Msa0388530:intron | 30.0% | |
| TACTGTATCTTGAGGATATA+AGG | + | chr3_1:92992998-92993017 | Msa0388530:intron | 30.0% | |
| ! | CTTTTCAGATATAGTTACTC+AGG | - | chr3_1:92993059-92993078 | None:intergenic | 30.0% |
| ! | TTGTGTTTTATGCAGTTTAC+AGG | + | chr3_1:92993151-92993170 | Msa0388530:intron | 30.0% |
| ! | GCTATATGTCACTATTTTGT+TGG | + | chr3_1:92993284-92993303 | Msa0388530:CDS | 30.0% |
| TACAATCCTATTCTTACGAA+TGG | + | chr3_1:92993354-92993373 | Msa0388530:CDS | 30.0% | |
| AGATAACCATTCGTAAGAAT+AGG | - | chr3_1:92993363-92993382 | None:intergenic | 30.0% | |
| TATAAATATAGCTGCTGTTG+GGG | + | chr3_1:92993478-92993497 | Msa0388530:intron | 30.0% | |
| AAATTGCATATTGCCAATAG+TGG | - | chr3_1:92993510-92993529 | None:intergenic | 30.0% | |
| TGCTTCTCAATGTTAAAATG+TGG | + | chr3_1:92993677-92993696 | Msa0388530:intron | 30.0% | |
| CTTTAGTCTGGACTTAAAAT+AGG | - | chr3_1:92993721-92993740 | None:intergenic | 30.0% | |
| ! | ACAGTTTCTGGAAGTAAAAA+TGG | + | chr3_1:92993745-92993764 | Msa0388530:intron | 30.0% |
| ! | ACATATTTAAGCCTTTTGAG+AGG | + | chr3_1:92993822-92993841 | Msa0388530:intron | 30.0% |
| !! | CATATTTAAGCCTTTTGAGA+GGG | + | chr3_1:92993823-92993842 | Msa0388530:intron | 30.0% |
| ! | TATTCATTTTGCAGTGTGTT+TGG | + | chr3_1:92994075-92994094 | Msa0388530:intron | 30.0% |
| ! | ATTCATTTTGCAGTGTGTTT+GGG | + | chr3_1:92994076-92994095 | Msa0388530:intron | 30.0% |
| ! | ATTTTGGGCATATTATGGTT+AGG | + | chr3_1:92994452-92994471 | Msa0388530:intron | 30.0% |
| !! | CTTGTTGTTTCAGATACATT+TGG | + | chr3_1:92994655-92994674 | Msa0388530:intron | 30.0% |
| ! | TTGTTTAATTTCCTCATACC+TGG | + | chr3_1:92994679-92994698 | Msa0388530:CDS | 30.0% |
| ! | TGTTTAATTTCCTCATACCT+GGG | + | chr3_1:92994680-92994699 | Msa0388530:CDS | 30.0% |
| ATCATGCAAAATGCAACTAA+TGG | - | chr3_1:92994801-92994820 | None:intergenic | 30.0% | |
| ! | GTTACCTATCAAGTTCTAAT+CGG | + | chr3_1:92995060-92995079 | Msa0388530:intron | 30.0% |
| GATTACATTAACAACTCCAA+TGG | - | chr3_1:92995324-92995343 | None:intergenic | 30.0% | |
| ! | TAATGTAATCTCCCATTTTC+TGG | + | chr3_1:92995334-92995353 | Msa0388530:intron | 30.0% |
| CTGAACAAGTTATAATTGAC+TGG | + | chr3_1:92995390-92995409 | Msa0388530:intron | 30.0% | |
| TCCGAAATTTATTGTTTGCA+CGG | + | chr3_1:92995513-92995532 | Msa0388530:CDS | 30.0% | |
| AATTTGGGCTTGTATTTGTA+GGG | - | chr3_1:92995561-92995580 | None:intergenic | 30.0% | |
| !! | TATTTTCTGGGAATATTTGG+AGG | + | chr3_1:92995683-92995702 | Msa0388530:CDS | 30.0% |
| GTGAACAAATGCTATGAAAT+TGG | + | chr3_1:92995828-92995847 | Msa0388530:intron | 30.0% | |
| GAGCTCTTACATATGATATT+TGG | + | chr3_1:92995885-92995904 | Msa0388530:intron | 30.0% | |
| ATTTGCGAAAACAAATGCAA+TGG | + | chr3_1:92995975-92995994 | Msa0388530:intron | 30.0% | |
| CTTAAAACTAACCAGCTATT+TGG | - | chr3_1:92996190-92996209 | None:intergenic | 30.0% | |
| ! | TTAGAGCATTATATTGACCA+TGG | - | chr3_1:92996288-92996307 | None:intergenic | 30.0% |
| GACATATGATTCAAGTGAAA+AGG | - | chr3_1:92996418-92996437 | None:intergenic | 30.0% | |
| TATGTCTTGCATAAAAGGTA+GGG | - | chr3_1:92996531-92996550 | None:intergenic | 30.0% | |
| ATTCTAAGTACTAGGTATGA+GGG | + | chr3_1:92996792-92996811 | Msa0388530:intron | 30.0% | |
| !!! | GATATAGTGTGTTTTTTCCT+AGG | + | chr3_1:92996944-92996963 | Msa0388530:intron | 30.0% |
| CATACAACTTGAACTATTTG+TGG | - | chr3_1:92997229-92997248 | None:intergenic | 30.0% | |
| ! | ATCTGGATTTTACTAGGTTT+GGG | + | chr3_1:92997528-92997547 | Msa0388530:intron | 30.0% |
| TTGTCATTATCATGGGAAAT+GGG | + | chr3_1:92997586-92997605 | Msa0388530:intron | 30.0% | |
| ! | AAGTAAAATACCTGATGATG+TGG | - | chr3_1:92997836-92997855 | None:intergenic | 30.0% |
| GATTAAGAAACTTGTAGCAA+TGG | + | chr3_1:92997957-92997976 | Msa0388530:CDS | 30.0% | |
| TTAGATGAGAAAAACGTTCT+AGG | - | chr3_1:92998047-92998066 | None:intergenic | 30.0% | |
| TTAATGTACATTTGATGCAC+AGG | - | chr3_1:92998210-92998229 | None:intergenic | 30.0% | |
| !! | TGCTTTTTATGCGTTTTTCT+TGG | + | chr3_1:92998247-92998266 | Msa0388530:intron | 30.0% |
| AATACATGAAAAGCTTGTCT+TGG | + | chr3_1:92998475-92998494 | Msa0388530:exon | 30.0% | |
| ! | GTTTTGCAAATAGAAGTTTG+TGG | + | chr3_1:92998668-92998687 | Msa0388530:three_prime_UTR | 30.0% |
| ! | TTTTATTGCAGCTTACTGAA+TGG | - | chr3_1:92998795-92998814 | None:intergenic | 30.0% |
| ! | GCATGCAACAATTTCAGTTT+TGG | - | chr3_1:92992286-92992305 | None:intergenic | 35.0% |
| TTTACCTCAGTGACGATATT+TGG | - | chr3_1:92992329-92992348 | None:intergenic | 35.0% | |
| AAGCAATAAACGATTTAGCG+AGG | - | chr3_1:92992364-92992383 | None:intergenic | 35.0% | |
| ! | TACTTCGTTTGTCTTTTGGT+TGG | + | chr3_1:92992571-92992590 | Msa0388530:CDS | 35.0% |
| TAGAATTACAACAATACCCC+TGG | + | chr3_1:92992883-92992902 | Msa0388530:intron | 35.0% | |
| ! | CTAACGACCATTTTACAACT+TGG | + | chr3_1:92992965-92992984 | Msa0388530:intron | 35.0% |
| ! | AACGACCATTTTACAACTTG+GGG | + | chr3_1:92992967-92992986 | Msa0388530:intron | 35.0% |
| AAATCCCCCAAGTTGTAAAA+TGG | - | chr3_1:92992975-92992994 | None:intergenic | 35.0% | |
| ATAGTTACTCAGGACAATTG+AGG | - | chr3_1:92993049-92993068 | None:intergenic | 35.0% | |
| ! | GTTTTTGAATCTCGTGCTAT+TGG | + | chr3_1:92993093-92993112 | Msa0388530:intron | 35.0% |
| ! | TATACTGCCATTCTTTTCCA+TGG | + | chr3_1:92993177-92993196 | Msa0388530:CDS | 35.0% |
| TCATGTTCTCTTCAACATGA+TGG | + | chr3_1:92993209-92993228 | Msa0388530:CDS | 35.0% | |
| !! | ATGATGGCTTTAGTTCCTTT+GGG | + | chr3_1:92993225-92993244 | Msa0388530:CDS | 35.0% |
| ! | TCATGAATGAGTGTGCTATT+GGG | + | chr3_1:92993382-92993401 | Msa0388530:CDS | 35.0% |
| GAAACTGTGATTCTTTAGTC+TGG | - | chr3_1:92993733-92993752 | None:intergenic | 35.0% | |
| GACTAAAGAATCACAGTTTC+TGG | + | chr3_1:92993733-92993752 | Msa0388530:intron | 35.0% | |
| ! | TCATCGCTCAATTCTCATTT+TGG | - | chr3_1:92993856-92993875 | None:intergenic | 35.0% |
| TACAAATTCGTGAATCTGCA+AGG | + | chr3_1:92994035-92994054 | Msa0388530:intron | 35.0% | |
| ACAAATTCGTGAATCTGCAA+GGG | + | chr3_1:92994036-92994055 | Msa0388530:intron | 35.0% | |
| GAAAAATTGTACTCACCACT+TGG | - | chr3_1:92994118-92994137 | None:intergenic | 35.0% | |
| ! | ACTGGATTTTGGGCATATTA+TGG | + | chr3_1:92994447-92994466 | Msa0388530:intron | 35.0% |
| ATGCAAAATGTCTCACTACT+TGG | + | chr3_1:92994511-92994530 | Msa0388530:CDS | 35.0% | |
| ! | AGGTGAGTAGTTCAAGTTAT+TGG | - | chr3_1:92994616-92994635 | None:intergenic | 35.0% |
| GAAGAATAAAATGATGTCCC+AGG | - | chr3_1:92994700-92994719 | None:intergenic | 35.0% | |
| ! | CTTTTATAGCGCACAAAGAT+GGG | + | chr3_1:92994764-92994783 | Msa0388530:intron | 35.0% |
| !! | ATGATATTAAGGCACCGATA+GGG | + | chr3_1:92994816-92994835 | Msa0388530:intron | 35.0% |
| TTTGTAAGTTCCCTGTTCTA+AGG | + | chr3_1:92994912-92994931 | Msa0388530:intron | 35.0% | |
| ACTAATTGATTAACTAGCCG+AGG | + | chr3_1:92995035-92995054 | Msa0388530:intron | 35.0% | |
| CTAATTGATTAACTAGCCGA+GGG | + | chr3_1:92995036-92995055 | Msa0388530:intron | 35.0% | |
| TAATTGATTAACTAGCCGAG+GGG | + | chr3_1:92995037-92995056 | Msa0388530:intron | 35.0% | |
| ACAACCGATTAGAACTTGAT+AGG | - | chr3_1:92995067-92995086 | None:intergenic | 35.0% | |
| ! | AAAATTACTGACTGCTTGAG+TGG | - | chr3_1:92995253-92995272 | None:intergenic | 35.0% |
| ! | TCAATTAGCCTCCAGAAAAT+GGG | - | chr3_1:92995348-92995367 | None:intergenic | 35.0% |
| ! | TTCAATTAGCCTCCAGAAAA+TGG | - | chr3_1:92995349-92995368 | None:intergenic | 35.0% |
| CCCGTGCAAACAATAAATTT+CGG | - | chr3_1:92995517-92995536 | None:intergenic | 35.0% | |
| CCGAAATTTATTGTTTGCAC+GGG | + | chr3_1:92995514-92995533 | Msa0388530:CDS | 35.0% | |
| AAATTTATTGTTTGCACGGG+CGG | + | chr3_1:92995517-92995536 | Msa0388530:CDS | 35.0% | |
| GAATTTGGGCTTGTATTTGT+AGG | - | chr3_1:92995562-92995581 | None:intergenic | 35.0% | |
| CTTACCTAGTGGTTGAATTT+GGG | - | chr3_1:92995576-92995595 | None:intergenic | 35.0% | |
| ACTTACCTAGTGGTTGAATT+TGG | - | chr3_1:92995577-92995596 | None:intergenic | 35.0% | |
| TCCACACTAAACCTTACTAA+TGG | + | chr3_1:92995605-92995624 | Msa0388530:intron | 35.0% | |
| ! | GATATCTAGTGCCATTAGTA+AGG | - | chr3_1:92995619-92995638 | None:intergenic | 35.0% |
| ! | TTTGAGGCATCAATGATGAT+AGG | - | chr3_1:92995711-92995730 | None:intergenic | 35.0% |
| ! | CTCATCTTGTCTCATGTTTT+TGG | + | chr3_1:92995762-92995781 | Msa0388530:intron | 35.0% |
| !!! | ATCTTGTCTCATGTTTTTGG+TGG | + | chr3_1:92995765-92995784 | Msa0388530:intron | 35.0% |
| TGTAAGAGCTCTATGTACTT+AGG | - | chr3_1:92995876-92995895 | None:intergenic | 35.0% | |
| ATGGCAGGAGTTAAACATAA+AGG | - | chr3_1:92996094-92996113 | None:intergenic | 35.0% | |
| ! | TTTCTGAAAACCCAAATAGC+TGG | + | chr3_1:92996176-92996195 | Msa0388530:intron | 35.0% |
| ! | ATCTTGTTGTGCTTGTTTGT+TGG | + | chr3_1:92996475-92996494 | Msa0388530:intron | 35.0% |
| TGCATAAAAGGTAGGGATAT+AGG | - | chr3_1:92996524-92996543 | None:intergenic | 35.0% | |
| CTATGTCTTGCATAAAAGGT+AGG | - | chr3_1:92996532-92996551 | None:intergenic | 35.0% | |
| ! | ACTATTATCCTCTAAGAGTC+TGG | - | chr3_1:92996748-92996767 | None:intergenic | 35.0% |
| CTCATACCTAGTACTTAGAA+TGG | - | chr3_1:92996793-92996812 | None:intergenic | 35.0% | |
| CATTCTAAGTACTAGGTATG+AGG | + | chr3_1:92996791-92996810 | Msa0388530:intron | 35.0% | |
| ! | TGTGCATGATTGGTAACTTA+TGG | + | chr3_1:92996822-92996841 | Msa0388530:intron | 35.0% |
| AAGTTGAAATTGACACTCCT+AGG | - | chr3_1:92996964-92996983 | None:intergenic | 35.0% | |
| TATTATTGTCCATGGCAAAC+AGG | - | chr3_1:92997027-92997046 | None:intergenic | 35.0% | |
| AGTTGTATGTTCATAGCCAT+TGG | + | chr3_1:92997240-92997259 | Msa0388530:intron | 35.0% | |
| CATTATGAGCAACCCATTAA+CGG | - | chr3_1:92997409-92997428 | None:intergenic | 35.0% | |
| ! | CTGACTTGTAAATTGGTTGA+TGG | + | chr3_1:92997469-92997488 | Msa0388530:intron | 35.0% |
| ! | CATCTGGATTTTACTAGGTT+TGG | + | chr3_1:92997527-92997546 | Msa0388530:intron | 35.0% |
| TAGTCTCCTTGTCATTATCA+TGG | + | chr3_1:92997578-92997597 | Msa0388530:intron | 35.0% | |
| AGTCTCCTTGTCATTATCAT+GGG | + | chr3_1:92997579-92997598 | Msa0388530:intron | 35.0% | |
| ! | CATTTCCCATGATAATGACA+AGG | - | chr3_1:92997587-92997606 | None:intergenic | 35.0% |
| CTTGTCATTATCATGGGAAA+TGG | + | chr3_1:92997585-92997604 | Msa0388530:intron | 35.0% | |
| ATACTACAGTATCTCTTGCT+TGG | + | chr3_1:92997651-92997670 | Msa0388530:intron | 35.0% | |
| AGTGATCAAGAAAAATGGCT+TGG | + | chr3_1:92998017-92998036 | Msa0388530:intron | 35.0% | |
| ! | TTGAACTTTTTACTCGGATG+TGG | + | chr3_1:92998165-92998184 | Msa0388530:intron | 35.0% |
| ! | TGTTGGTCTATCACATTTAC+AGG | + | chr3_1:92998449-92998468 | Msa0388530:intron | 35.0% |
| ! | GTTGGTCTATCACATTTACA+GGG | + | chr3_1:92998450-92998469 | Msa0388530:intron | 35.0% |
| TTCTGTTCATATGTGTTTCG+AGG | - | chr3_1:92998575-92998594 | None:intergenic | 35.0% | |
| AACAACCATATTCAAGACGA+GGG | - | chr3_1:92998735-92998754 | None:intergenic | 35.0% | |
| AAACAACCATATTCAAGACG+AGG | - | chr3_1:92998736-92998755 | None:intergenic | 35.0% | |
| TCTTTCACTCTTCCTCAGTT+CGG | - | chr3_1:92992136-92992155 | None:intergenic | 40.0% | |
| AAGAAAGAAAACCCGAACTG+AGG | + | chr3_1:92992168-92992187 | Msa0388530:five_prime_UTR | 40.0% | |
| TCTTTCACTCTTCCTCAGTT+CGG | - | chr3_1:92992136-92992155 | None:intergenic | 40.0% | |
| TAAACGATTTAGCGAGGATC+AGG | - | chr3_1:92992358-92992377 | None:intergenic | 40.0% | |
| TATGCTTAATTGACACAGGC+AGG | + | chr3_1:92992469-92992488 | Msa0388530:intron | 40.0% | |
| ATGCTTAATTGACACAGGCA+GGG | + | chr3_1:92992470-92992489 | Msa0388530:intron | 40.0% | |
| AACTAGGGTGAATCAATGGT+GGG | + | chr3_1:92992498-92992517 | Msa0388530:CDS | 40.0% | |
| !! | TCCATTTTTCACTTCTGCTG+TGG | + | chr3_1:92992528-92992547 | Msa0388530:CDS | 40.0% |
| ACCACAGCAGAAGTGAAAAA+TGG | - | chr3_1:92992532-92992551 | None:intergenic | 40.0% | |
| TTGAAATCGCGATACAACAG+CGG | - | chr3_1:92992632-92992651 | None:intergenic | 40.0% | |
| ! | ACTTCTCTATAGTCTGAGGT+AGG | - | chr3_1:92992807-92992826 | None:intergenic | 40.0% |
| GGCATACTCAACAAGATTAG+TGG | + | chr3_1:92992941-92992960 | Msa0388530:intron | 40.0% | |
| ! | ACGACCATTTTACAACTTGG+GGG | + | chr3_1:92992968-92992987 | Msa0388530:intron | 40.0% |
| CAGTGAACCATGGAAAAGAA+TGG | - | chr3_1:92993187-92993206 | None:intergenic | 40.0% | |
| !! | CATGATGGCTTTAGTTCCTT+TGG | + | chr3_1:92993224-92993243 | Msa0388530:CDS | 40.0% |
| CTCATGAATGAGTGTGCTAT+TGG | + | chr3_1:92993381-92993400 | Msa0388530:CDS | 40.0% | |
| CTTGAACAGCTTGCAAATTG+TGG | - | chr3_1:92993592-92993611 | None:intergenic | 40.0% | |
| TGGAGATAAACCCTCTCAAA+AGG | - | chr3_1:92993836-92993855 | None:intergenic | 40.0% | |
| ! | GTAGTGAGACATTTTGCATG+AGG | - | chr3_1:92994510-92994529 | None:intergenic | 40.0% |
| ! | ACCTTTCTGGCATTGTATCT+GGG | + | chr3_1:92994536-92994555 | Msa0388530:CDS | 40.0% |
| AAAATGATGTCCCAGGTATG+AGG | - | chr3_1:92994693-92994712 | None:intergenic | 40.0% | |
| AAGAAAGAGACTTACAAGCC+AGG | - | chr3_1:92994737-92994756 | None:intergenic | 40.0% | |
| ! | GCTTTTATAGCGCACAAAGA+TGG | + | chr3_1:92994763-92994782 | Msa0388530:intron | 40.0% |
| ! | CACAAAGATGGGAAAGTATG+CGG | + | chr3_1:92994775-92994794 | Msa0388530:intron | 40.0% |
| !! | CATGATATTAAGGCACCGAT+AGG | + | chr3_1:92994815-92994834 | Msa0388530:intron | 40.0% |
| GTAATGACACAAGTCCCTAT+CGG | - | chr3_1:92994833-92994852 | None:intergenic | 40.0% | |
| TTGAACACTGCAGAACTTCT+AGG | + | chr3_1:92994888-92994907 | Msa0388530:intron | 40.0% | |
| TGAACACTGCAGAACTTCTA+GGG | + | chr3_1:92994889-92994908 | Msa0388530:intron | 40.0% | |
| TGAAATTGGGCCTTAGAACA+GGG | - | chr3_1:92994925-92994944 | None:intergenic | 40.0% | |
| ! | AGTCCTCTGAGAGTGAAATT+GGG | - | chr3_1:92994938-92994957 | None:intergenic | 40.0% |
| ! | TAGTCCTCTGAGAGTGAAAT+TGG | - | chr3_1:92994939-92994958 | None:intergenic | 40.0% |
| AAATAAGAACAGGGGTTGAG+AGG | - | chr3_1:92994972-92994991 | None:intergenic | 40.0% | |
| AATTGATTAACTAGCCGAGG+GGG | + | chr3_1:92995038-92995057 | Msa0388530:intron | 40.0% | |
| TATTGTACCCTGCACAATGT+CGG | - | chr3_1:92995132-92995151 | None:intergenic | 40.0% | |
| ! | TGCTTTGACTGATTAGCTGA+TGG | + | chr3_1:92995179-92995198 | Msa0388530:intron | 40.0% |
| ! | TGTAATCTCCCATTTTCTGG+AGG | + | chr3_1:92995337-92995356 | Msa0388530:intron | 40.0% |
| CACATGATGACTGAAAGTCA+AGG | - | chr3_1:92995486-92995505 | None:intergenic | 40.0% | |
| ACTTTCAGTCATCATGTGTG+AGG | + | chr3_1:92995488-92995507 | Msa0388530:intron | 40.0% | |
| GAAATCACAGACTTACCTAG+TGG | - | chr3_1:92995587-92995606 | None:intergenic | 40.0% | |
| GCCATTAGTAAGGTTTAGTG+TGG | - | chr3_1:92995609-92995628 | None:intergenic | 40.0% | |
| TGAGTAGACACTTCTCTTTG+AGG | - | chr3_1:92995727-92995746 | None:intergenic | 40.0% | |
| AAGTTAGACGAATAGCGAAC+AGG | - | chr3_1:92996023-92996042 | None:intergenic | 40.0% | |
| TTTAACTCCTGCCATTCCTT+TGG | + | chr3_1:92996099-92996118 | Msa0388530:intron | 40.0% | |
| !! | TAACAGCAGCAACTGCTTTT+TGG | + | chr3_1:92996305-92996324 | Msa0388530:intron | 40.0% |
| ! | CTGGCTTGAAGATTTGAATC+TGG | - | chr3_1:92996729-92996748 | None:intergenic | 40.0% |
| ATCCAGCCATTCTAAGTACT+AGG | + | chr3_1:92996784-92996803 | Msa0388530:CDS | 40.0% | |
| TACCTAGTACTTAGAATGGC+TGG | - | chr3_1:92996789-92996808 | None:intergenic | 40.0% | |
| ! | GCATGATTGGTAACTTATGG+TGG | + | chr3_1:92996825-92996844 | Msa0388530:intron | 40.0% |
| ATCCTACAGTTAGATGAGCT+TGG | + | chr3_1:92996986-92997005 | Msa0388530:intron | 40.0% | |
| TCCTACAGTTAGATGAGCTT+GGG | + | chr3_1:92996987-92997006 | Msa0388530:intron | 40.0% | |
| GATGAGCTTGGGTTACAAAT+TGG | + | chr3_1:92996998-92997017 | Msa0388530:intron | 40.0% | |
| ! | AATTGGTTTCCTGTTTGCCA+TGG | + | chr3_1:92997015-92997034 | Msa0388530:intron | 40.0% |
| !! | GGGTTCACTGACTTGTAAAT+TGG | + | chr3_1:92997462-92997481 | Msa0388530:intron | 40.0% |
| TAACTTGAGCAAGCAAGCAA+TGG | - | chr3_1:92997499-92997518 | None:intergenic | 40.0% | |
| ATCATGGGAAATGGGAAGTT+AGG | + | chr3_1:92997594-92997613 | Msa0388530:intron | 40.0% | |
| ATTGTTTCCCCTATGAATGC+AGG | + | chr3_1:92997912-92997931 | Msa0388530:intron | 40.0% | |
| TTGTTTCCCCTATGAATGCA+GGG | + | chr3_1:92997913-92997932 | Msa0388530:intron | 40.0% | |
| ! | TTGTAGCAATGGGCTTTGAT+AGG | + | chr3_1:92997968-92997987 | Msa0388530:CDS | 40.0% |
| ! | TGTAGCAATGGGCTTTGATA+GGG | + | chr3_1:92997969-92997988 | Msa0388530:CDS | 40.0% |
| ATCGTTGTTTGATCTCCTTC+TGG | + | chr3_1:92998087-92998106 | Msa0388530:intron | 40.0% | |
| TCGTTGTTTGATCTCCTTCT+GGG | + | chr3_1:92998088-92998107 | Msa0388530:intron | 40.0% | |
| ! | TGCTGATGGTGATCTTAATG+TGG | + | chr3_1:92998307-92998326 | Msa0388530:CDS | 40.0% |
| GAAATTCAACTAGGACCTGT+TGG | - | chr3_1:92998352-92998371 | None:intergenic | 40.0% | |
| AGACTCCATCGCTAACAATT+TGG | + | chr3_1:92998544-92998563 | Msa0388530:three_prime_UTR | 40.0% | |
| TGTCACCAAATTGTTAGCGA+TGG | - | chr3_1:92998552-92998571 | None:intergenic | 40.0% | |
| ATCAACACACTACGCTTATG+TGG | - | chr3_1:92998613-92998632 | None:intergenic | 40.0% | |
| CTTTCACTCTTCCTCAGTTC+GGG | - | chr3_1:92992135-92992154 | None:intergenic | 45.0% | |
| CTTTCACTCTTCCTCAGTTC+GGG | - | chr3_1:92992135-92992154 | None:intergenic | 45.0% | |
| GAGACCAAATATCGTCACTG+AGG | + | chr3_1:92992322-92992341 | Msa0388530:CDS | 45.0% | |
| TGCCAACTAGGGTGAATCAA+TGG | + | chr3_1:92992494-92992513 | Msa0388530:CDS | 45.0% | |
| !! | CACCATTGATTCACCCTAGT+TGG | - | chr3_1:92992499-92992518 | None:intergenic | 45.0% |
| CAACTAGGGTGAATCAATGG+TGG | + | chr3_1:92992497-92992516 | Msa0388530:CDS | 45.0% | |
| TCTGCTGTGGTTATTGTCTG+CGG | + | chr3_1:92992541-92992560 | Msa0388530:CDS | 45.0% | |
| CAAGAAGCAGATCTCGGAAA+AGG | - | chr3_1:92992605-92992624 | None:intergenic | 45.0% | |
| GCTGTTGTATCGCGATTTCA+AGG | + | chr3_1:92992631-92992650 | Msa0388530:intron | 45.0% | |
| GACGCGATCGATCTTTGTTA+AGG | + | chr3_1:92992764-92992783 | Msa0388530:intron | 45.0% | |
| ! | TCTGAGGTAGGCACAATTGA+CGG | - | chr3_1:92992795-92992814 | None:intergenic | 45.0% |
| AGACACCAAAGAAAGGCAGA+CGG | - | chr3_1:92992910-92992929 | None:intergenic | 45.0% | |
| ! | CAATTGAGGTGCTAGAACAG+TGG | - | chr3_1:92993035-92993054 | None:intergenic | 45.0% |
| GAACATGAAGCAGTGAACCA+TGG | - | chr3_1:92993197-92993216 | None:intergenic | 45.0% | |
| TCTGAGCTGGAAAGGATCAT+GGG | + | chr3_1:92993249-92993268 | Msa0388530:CDS | 45.0% | |
| CCAGCAGTGCTATGAAAACA+TGG | - | chr3_1:92993329-92993348 | None:intergenic | 45.0% | |
| ! | CCATGTTTTCATAGCACTGC+TGG | + | chr3_1:92993326-92993345 | Msa0388530:CDS | 45.0% |
| ! | TGTTTTCATAGCACTGCTGG+TGG | + | chr3_1:92993329-92993348 | Msa0388530:CDS | 45.0% |
| !! | GAGTGTGCTATTGGGTTTTC+AGG | + | chr3_1:92993390-92993409 | Msa0388530:CDS | 45.0% |
| GTTATAGAGACAAGCCTGAG+TGG | + | chr3_1:92993432-92993451 | Msa0388530:CDS | 45.0% | |
| GTTGGGGAATTCACCACTAT+TGG | + | chr3_1:92993494-92993513 | Msa0388530:intron | 45.0% | |
| TCAGTGCAGAGTAAACTGCA+AGG | - | chr3_1:92993964-92993983 | None:intergenic | 45.0% | |
| TGTTTAATGTGCCTGCCAAG+TGG | + | chr3_1:92994100-92994119 | Msa0388530:CDS | 45.0% | |
| AATTGTACTCACCACTTGGC+AGG | - | chr3_1:92994114-92994133 | None:intergenic | 45.0% | |
| ! | TTTTAACCCCTCATCACACC+AGG | + | chr3_1:92994241-92994260 | Msa0388530:intron | 45.0% |
| TTTAACCCCTCATCACACCA+GGG | + | chr3_1:92994242-92994261 | Msa0388530:intron | 45.0% | |
| ! | AGACATTTTGCATGAGGAGC+TGG | - | chr3_1:92994504-92994523 | None:intergenic | 45.0% |
| TCACTACTTGGTCACCTTTC+TGG | + | chr3_1:92994523-92994542 | Msa0388530:CDS | 45.0% | |
| ! | CACCTTTCTGGCATTGTATC+TGG | + | chr3_1:92994535-92994554 | Msa0388530:CDS | 45.0% |
| ACCCAGATACAATGCCAGAA+AGG | - | chr3_1:92994540-92994559 | None:intergenic | 45.0% | |
| AAAGAGACTTACAAGCCAGG+AGG | - | chr3_1:92994734-92994753 | None:intergenic | 45.0% | |
| GTGAAATTGGGCCTTAGAAC+AGG | - | chr3_1:92994926-92994945 | None:intergenic | 45.0% | |
| AACTTGATAGGTAACCCCCT+CGG | - | chr3_1:92995055-92995074 | None:intergenic | 45.0% | |
| ! | TATTTTCCCCGACATTGTGC+AGG | + | chr3_1:92995121-92995140 | Msa0388530:intron | 45.0% |
| ! | ATTTTCCCCGACATTGTGCA+GGG | + | chr3_1:92995122-92995141 | Msa0388530:intron | 45.0% |
| ATTGTACCCTGCACAATGTC+GGG | - | chr3_1:92995131-92995150 | None:intergenic | 45.0% | |
| TTTGTAGGGATATAGCCCGA+AGG | - | chr3_1:92995547-92995566 | None:intergenic | 45.0% | |
| CAAGCCCAAATTCAACCACT+AGG | + | chr3_1:92995569-92995588 | Msa0388530:CDS | 45.0% | |
| ! | TGGGGCAGTGGAATATTTTC+TGG | + | chr3_1:92995670-92995689 | Msa0388530:intron | 45.0% |
| ! | GGGGCAGTGGAATATTTTCT+GGG | + | chr3_1:92995671-92995690 | Msa0388530:intron | 45.0% |
| !! | AGAAGTGTCTACTCAACCTC+AGG | + | chr3_1:92995732-92995751 | Msa0388530:CDS | 45.0% |
| CAAGATGAGTCACATACCTG+AGG | - | chr3_1:92995751-92995770 | None:intergenic | 45.0% | |
| GTCTATATTCTCCTGTCAGC+TGG | + | chr3_1:92996581-92996600 | Msa0388530:intron | 45.0% | |
| AATGAATGACTCCAGCTGAC+AGG | - | chr3_1:92996595-92996614 | None:intergenic | 45.0% | |
| GCTCAAGGTCAAATTGCTTC+TGG | + | chr3_1:92996696-92996715 | Msa0388530:CDS | 45.0% | |
| TCTTCAAGCCAGACTCTTAG+AGG | + | chr3_1:92996737-92996756 | Msa0388530:CDS | 45.0% | |
| GCTGGATCTGAGAGATGATT+GGG | - | chr3_1:92996771-92996790 | None:intergenic | 45.0% | |
| !! | GGGACAGTTTTGTGCATGAT+TGG | + | chr3_1:92996812-92996831 | Msa0388530:intron | 45.0% |
| ACCCAAGCTCATCTAACTGT+AGG | - | chr3_1:92996991-92997010 | None:intergenic | 45.0% | |
| GTTGTAGCTGCATTATCGAC+TGG | - | chr3_1:92997800-92997819 | None:intergenic | 45.0% | |
| GTCGATAATGCAGCTACAAC+AGG | + | chr3_1:92997800-92997819 | Msa0388530:CDS | 45.0% | |
| AACTGCTCCCTGCATTCATA+GGG | - | chr3_1:92997923-92997942 | None:intergenic | 45.0% | |
| ! | TTTTACTCGGATGTGGTGAC+TGG | + | chr3_1:92998172-92998191 | Msa0388530:intron | 45.0% |
| TGGTGATCTTAATGTGGCAG+TGG | + | chr3_1:92998313-92998332 | Msa0388530:CDS | 45.0% | |
| GGAAATACTCATGAGCCAAC+AGG | + | chr3_1:92998334-92998353 | Msa0388530:CDS | 45.0% | |
| CAAGCACAACAACAGTGTCA+GGG | - | chr3_1:92998515-92998534 | None:intergenic | 45.0% | |
| ACAAGCACAACAACAGTGTC+AGG | - | chr3_1:92998516-92998535 | None:intergenic | 45.0% | |
| TCAAGACGAGGGTAGAGAAT+GGG | - | chr3_1:92998724-92998743 | None:intergenic | 45.0% | |
| TTCAAGACGAGGGTAGAGAA+TGG | - | chr3_1:92998725-92998744 | None:intergenic | 45.0% | |
| CTCTACCCTCGTCTTGAATA+TGG | + | chr3_1:92998727-92998746 | Msa0388530:three_prime_UTR | 45.0% | |
| !!! | TATAATTTTGTTATATTTAT+AGG | + | chr3_1:92994352-92994371 | Msa0388530:intron | 5.0% |
| !!! | ATAATTTTGTTATATTTATA+GGG | + | chr3_1:92994353-92994372 | Msa0388530:intron | 5.0% |
| GGAAGGCAAGAAGCAGATCT+CGG | - | chr3_1:92992611-92992630 | None:intergenic | 50.0% | |
| AATCGCGATACAACAGCGGA+AGG | - | chr3_1:92992628-92992647 | None:intergenic | 50.0% | |
| AAAGAAAGGCAGACGGTCCA+GGG | - | chr3_1:92992903-92992922 | None:intergenic | 50.0% | |
| CTCTGAGCTGGAAAGGATCA+TGG | + | chr3_1:92993248-92993267 | Msa0388530:CDS | 50.0% | |
| TCCTCGATTGAACTCCACTC+AGG | - | chr3_1:92993449-92993468 | None:intergenic | 50.0% | |
| TGAGTGGAGTTCAATCGAGG+AGG | + | chr3_1:92993448-92993467 | Msa0388530:CDS | 50.0% | |
| TGGAGTTCAATCGAGGAGGT+TGG | + | chr3_1:92993452-92993471 | Msa0388530:intron | 50.0% | |
| ! | TCTTTTAATCTCGGCCTCCC+TGG | - | chr3_1:92994262-92994281 | None:intergenic | 50.0% |
| CTTCAATTGAAGCCTCCTCC+TGG | + | chr3_1:92994716-92994735 | Msa0388530:CDS | 50.0% | |
| AGGCCCAATTTCACTCTCAG+AGG | + | chr3_1:92994932-92994951 | Msa0388530:intron | 50.0% | |
| CAGGGGTTGAGAGGAAGATA+TGG | - | chr3_1:92994963-92994982 | None:intergenic | 50.0% | |
| TTGTACCCTGCACAATGTCG+GGG | - | chr3_1:92995130-92995149 | None:intergenic | 50.0% | |
| ! | CATGCATTTTCATGGGGCAG+TGG | + | chr3_1:92995658-92995677 | Msa0388530:intron | 50.0% |
| ! | TAGCTTGCCAAAGGAATGGC+AGG | - | chr3_1:92996109-92996128 | None:intergenic | 50.0% |
| CGAAACCTTGCAGTCAGTTG+AGG | + | chr3_1:92996635-92996654 | Msa0388530:intron | 50.0% | |
| ACTGTCCTCAACTGACTGCA+AGG | - | chr3_1:92996643-92996662 | None:intergenic | 50.0% | |
| TGCAGTCAGTTGAGGACAGT+AGG | + | chr3_1:92996643-92996662 | Msa0388530:intron | 50.0% | |
| TTGAGGACAGTAGGTTCCCT+GGG | + | chr3_1:92996652-92996671 | Msa0388530:CDS | 50.0% | |
| TTGACCTTGAGCAGCAGCAA+GGG | - | chr3_1:92996688-92996707 | None:intergenic | 50.0% | |
| TTTGACCTTGAGCAGCAGCA+AGG | - | chr3_1:92996689-92996708 | None:intergenic | 50.0% | |
| GGCTGGATCTGAGAGATGAT+TGG | - | chr3_1:92996772-92996791 | None:intergenic | 50.0% | |
| AGCAGCTGTTCCACATCATC+AGG | + | chr3_1:92997823-92997842 | Msa0388530:CDS | 50.0% | |
| ACTGCTCCCTGCATTCATAG+GGG | - | chr3_1:92997922-92997941 | None:intergenic | 50.0% | |
| CAACTGCTCCCTGCATTCAT+AGG | - | chr3_1:92997924-92997943 | None:intergenic | 50.0% | |
| TAAGGCAAGAAGGACCCAGA+AGG | - | chr3_1:92998105-92998124 | None:intergenic | 50.0% | |
| GGTATGCTTTCAGACGCAAG+TGG | + | chr3_1:92998268-92998287 | Msa0388530:intron | 50.0% | |
| ACAGTGTCAGGGAAGTCTCT+GGG | - | chr3_1:92998504-92998523 | None:intergenic | 50.0% | |
| AACAGTGTCAGGGAAGTCTC+TGG | - | chr3_1:92998505-92998524 | None:intergenic | 50.0% | |
| TGAATGGCCATGGGCATTAG+CGG | - | chr3_1:92998779-92998798 | None:intergenic | 50.0% | |
| GCAGCTTACTGAATGGCCAT+GGG | - | chr3_1:92998788-92998807 | None:intergenic | 50.0% | |
| TGCAGCTTACTGAATGGCCA+TGG | - | chr3_1:92998789-92998808 | None:intergenic | 50.0% | |
| ACAGGCAGGGTTGCCAACTA+GGG | + | chr3_1:92992483-92992502 | Msa0388530:intron | 55.0% | |
| AAGAAAGGCAGACGGTCCAG+GGG | - | chr3_1:92992902-92992921 | None:intergenic | 55.0% | |
| CAAAGAAAGGCAGACGGTCC+AGG | - | chr3_1:92992904-92992923 | None:intergenic | 55.0% | |
| CTGGACCGTCTGCCTTTCTT+TGG | + | chr3_1:92992902-92992921 | Msa0388530:intron | 55.0% | |
| !! | AGTTCCTTTGGGCTCTGAGC+TGG | + | chr3_1:92993236-92993255 | Msa0388530:CDS | 55.0% |
| CTTTCCAGCTCAGAGCCCAA+AGG | - | chr3_1:92993243-92993262 | None:intergenic | 55.0% | |
| !! | CTTTGGGCTCTGAGCTGGAA+AGG | + | chr3_1:92993241-92993260 | Msa0388530:CDS | 55.0% |
| GCCTGAGTGGAGTTCAATCG+AGG | + | chr3_1:92993445-92993464 | Msa0388530:CDS | 55.0% | |
| GAGACTTACAAGCCAGGAGG+AGG | - | chr3_1:92994731-92994750 | None:intergenic | 55.0% | |
| TTGCACGGGCGGAAATCCTT+CGG | + | chr3_1:92995528-92995547 | Msa0388530:CDS | 55.0% | |
| GTTGAGGACAGTAGGTTCCC+TGG | + | chr3_1:92996651-92996670 | Msa0388530:CDS | 55.0% | |
| AGGGTAGAGAATGGGTGAGC+GGG | - | chr3_1:92998716-92998735 | None:intergenic | 55.0% | |
| GAGGGTAGAGAATGGGTGAG+CGG | - | chr3_1:92998717-92998736 | None:intergenic | 55.0% | |
| GAGAACACCGCTAATGCCCA+TGG | + | chr3_1:92998769-92998788 | Msa0388530:three_prime_UTR | 55.0% | |
| CACAGGCAGGGTTGCCAACT+AGG | + | chr3_1:92992482-92992501 | Msa0388530:intron | 60.0% | |
| AACCCCTCATCACACCAGGG+AGG | + | chr3_1:92994245-92994264 | Msa0388530:intron | 60.0% | |
| TGCACGGGCGGAAATCCTTC+GGG | + | chr3_1:92995529-92995548 | Msa0388530:CDS | 60.0% | |
| AGGACAGTAGGTTCCCTGGG+AGG | + | chr3_1:92996655-92996674 | Msa0388530:CDS | 60.0% | |
| GGACAGTAGGTTCCCTGGGA+GGG | + | chr3_1:92996656-92996675 | Msa0388530:CDS | 60.0% | |
| GACAGTAGGTTCCCTGGGAG+GGG | + | chr3_1:92996657-92996676 | Msa0388530:CDS | 60.0% | |
| AGGACCCTTGCTGCTGCTCA+AGG | + | chr3_1:92996681-92996700 | Msa0388530:CDS | 60.0% | |
| CTCGGATGTGGTGACTGGTG+TGG | + | chr3_1:92998177-92998196 | Msa0388530:intron | 60.0% | |
| GACGCAAGTGGAAGTAGCGC+TGG | + | chr3_1:92998280-92998299 | Msa0388530:intron | 60.0% | |
| ! | GCAAGTGGAAGTAGCGCTGG+CGG | + | chr3_1:92998283-92998302 | Msa0388530:CDS | 60.0% |
| GGCCTCCCTGGTGTGATGAG+GGG | - | chr3_1:92994250-92994269 | None:intergenic | 65.0% | |
| CGGCCTCCCTGGTGTGATGA+GGG | - | chr3_1:92994251-92994270 | None:intergenic | 65.0% | |
| TCGGCCTCCCTGGTGTGATG+AGG | - | chr3_1:92994252-92994271 | None:intergenic | 65.0% | |
| GTAGGTTCCCTGGGAGGGGA+AGG | + | chr3_1:92996661-92996680 | Msa0388530:CDS | 65.0% | |
| CAAGGGTCCTTCCCCTCCCA+GGG | - | chr3_1:92996671-92996690 | None:intergenic | 65.0% | |
| GCAAGGGTCCTTCCCCTCCC+AGG | - | chr3_1:92996672-92996691 | None:intergenic | 70.0% | |
| !! | GTAGCGCTGGCGGCTGCTGA+TGG | + | chr3_1:92998293-92998312 | Msa0388530:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 92992130 | 92998819 | 92992130 | ID=Msa0388530;Name=Msa0388530 |
| chr3_1 | mRNA | 92992130 | 92998819 | 92992130 | ID=Msa0388530-mRNA-1;Parent=Msa0388530;Name=Msa0388530-mRNA-1;_AED=0.14;_eAED=0.14;_QI=172|0.91|0.92|1|1|1|13|343|389 |
| chr3_1 | exon | 92992130 | 92992343 | 92992130 | ID=Msa0388530-mRNA-1:exon:26173;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92992487 | 92992592 | 92992487 | ID=Msa0388530-mRNA-1:exon:26174;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92993166 | 92993469 | 92993166 | ID=Msa0388530-mRNA-1:exon:26175;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92994089 | 92994121 | 92994089 | ID=Msa0388530-mRNA-1:exon:26176;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92994474 | 92994565 | 92994474 | ID=Msa0388530-mRNA-1:exon:26177;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92994668 | 92994741 | 92994668 | ID=Msa0388530-mRNA-1:exon:26178;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92995496 | 92995590 | 92995496 | ID=Msa0388530-mRNA-1:exon:26179;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92995678 | 92995753 | 92995678 | ID=Msa0388530-mRNA-1:exon:26180;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92996648 | 92996805 | 92996648 | ID=Msa0388530-mRNA-1:exon:26181;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92997793 | 92997844 | 92997793 | ID=Msa0388530-mRNA-1:exon:26182;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92997934 | 92997990 | 92997934 | ID=Msa0388530-mRNA-1:exon:26183;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92998281 | 92998355 | 92998281 | ID=Msa0388530-mRNA-1:exon:26184;Parent=Msa0388530-mRNA-1 |
| chr3_1 | exon | 92998471 | 92998819 | 92998471 | ID=Msa0388530-mRNA-1:exon:26185;Parent=Msa0388530-mRNA-1 |
| chr3_1 | five_prime_UTR | 92992130 | 92992301 | 92992130 | ID=Msa0388530-mRNA-1:five_prime_utr;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92992302 | 92992343 | 92992302 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92992487 | 92992592 | 92992487 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92993166 | 92993469 | 92993166 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92994089 | 92994121 | 92994089 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92994474 | 92994565 | 92994474 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92994668 | 92994741 | 92994668 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92995496 | 92995590 | 92995496 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92995678 | 92995753 | 92995678 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92996648 | 92996805 | 92996648 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92997793 | 92997844 | 92997793 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92997934 | 92997990 | 92997934 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92998281 | 92998355 | 92998281 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | CDS | 92998471 | 92998476 | 92998471 | ID=Msa0388530-mRNA-1:cds;Parent=Msa0388530-mRNA-1 |
| chr3_1 | three_prime_UTR | 92998477 | 92998819 | 92998477 | ID=Msa0388530-mRNA-1:three_prime_utr;Parent=Msa0388530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
